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Receptor
PDB id Resolution Class Description Source Keywords
2J0W 2.5 Å EC: 2.7.2.4 CRYSTAL STRUCTURE OF E. COLI ASPARTOKINASE III IN COMPLEX WITH ASPARTATE AND ADP (R-STATE) ESCHERICHIA COLI FEEDBACK INHIBITION ALLOSTERIC REGULATION KINASE ACT DOMAIN TRANSFERASE ASPARTOKINASE AMINO ACID BIOSYNTHESIS AMINO-ACID BIOSYNTHESIS ASPARTATE PATHWAY LYSINE BIOSYNTHESIS
Ref.: STRUCTURES OF R- AND T-STATE ESCHERICHIA COLI ASPARTOKINASE III: MECHANISMS OF THE ALLOSTERIC TRANSITION AND INHIBITION BY LYSINE. J.BIOL.CHEM. V. 281 31544 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ADP A:820;
Valid;
none;
submit data
427.201 C10 H15 N5 O10 P2 c1nc(...
ASP A:502;
Valid;
none;
submit data
133.103 C4 H7 N O4 C([C@...
CL A:600;
Invalid;
none;
submit data
35.453 Cl [Cl-]
MG A:900;
Invalid;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2J0W 2.5 Å EC: 2.7.2.4 CRYSTAL STRUCTURE OF E. COLI ASPARTOKINASE III IN COMPLEX WITH ASPARTATE AND ADP (R-STATE) ESCHERICHIA COLI FEEDBACK INHIBITION ALLOSTERIC REGULATION KINASE ACT DOMAIN TRANSFERASE ASPARTOKINASE AMINO ACID BIOSYNTHESIS AMINO-ACID BIOSYNTHESIS ASPARTATE PATHWAY LYSINE BIOSYNTHESIS
Ref.: STRUCTURES OF R- AND T-STATE ESCHERICHIA COLI ASPARTOKINASE III: MECHANISMS OF THE ALLOSTERIC TRANSITION AND INHIBITION BY LYSINE. J.BIOL.CHEM. V. 281 31544 2006
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 6 families.
1 2J0W - ASP C4 H7 N O4 C([C@@H](C....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 6 families.
1 2J0W - ASP C4 H7 N O4 C([C@@H](C....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3C1M - ANP C10 H17 N6 O12 P3 c1nc(c2c(n....
2 2J0W - ASP C4 H7 N O4 C([C@@H](C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ADP; Similar ligands found: 452
No: Ligand ECFP6 Tc MDL keys Tc
1 ADP 1 1
2 HEJ 0.9 1
3 ATP 0.9 1
4 A2D 0.895522 0.971831
5 5FA 0.887324 1
6 AQP 0.887324 1
7 AP5 0.884058 0.971831
8 B4P 0.884058 0.971831
9 BA3 0.869565 0.971831
10 AN2 0.84507 0.985915
11 AT4 0.84507 0.958904
12 M33 0.833333 0.958333
13 ACQ 0.826667 0.972222
14 A 0.823529 0.971429
15 AMP 0.823529 0.971429
16 ACP 0.821918 0.972222
17 6YZ 0.818182 0.972222
18 APR 0.810811 0.971831
19 AR6 0.810811 0.971831
20 ANP 0.802632 0.972222
21 SAP 0.8 0.945946
22 AGS 0.8 0.945946
23 AD9 0.8 0.972222
24 ADX 0.783784 0.873418
25 CA0 0.783784 0.945205
26 TAT 0.779221 0.958904
27 T99 0.779221 0.958904
28 50T 0.773333 0.958333
29 ABM 0.763889 0.917808
30 APC 0.763158 0.958904
31 PRX 0.763158 0.893333
32 ATF 0.759494 0.958904
33 A22 0.753086 0.985915
34 AP2 0.743243 0.958904
35 A12 0.743243 0.958904
36 SRA 0.736111 0.918919
37 ADQ 0.73494 0.945205
38 25L 0.732558 0.985915
39 5AL 0.725 0.931507
40 2A5 0.717949 0.918919
41 A1R 0.714286 0.907895
42 AU1 0.714286 0.972222
43 A3R 0.714286 0.907895
44 ATR 0.708861 0.971429
45 ADP PO3 0.708861 0.943662
46 PAP 0.708861 0.985714
47 SRP 0.707317 0.906667
48 7D3 0.706667 0.905405
49 25A 0.702381 0.971831
50 9X8 0.697674 0.92
51 OAD 0.697674 0.945205
52 RBY 0.6875 0.932432
53 ADV 0.6875 0.932432
54 00A 0.686047 0.883117
55 OOB 0.682353 0.931507
56 5SV 0.682353 0.848101
57 8QN 0.682353 0.931507
58 3OD 0.681818 0.945205
59 BIS 0.681818 0.933333
60 ALF ADP 0.674699 0.87013
61 ADP ALF 0.674699 0.87013
62 AMO 0.674419 0.932432
63 4AD 0.674419 0.92
64 PAJ 0.674419 0.884615
65 GAP 0.670732 0.893333
66 MAP 0.670588 0.945946
67 AHX 0.666667 0.896104
68 VO4 ADP 0.666667 0.931507
69 DLL 0.666667 0.931507
70 ADP VO4 0.666667 0.931507
71 PTJ 0.662921 0.896104
72 3UK 0.659091 0.918919
73 SON 0.658228 0.932432
74 LMS 0.653333 0.82716
75 LAD 0.651685 0.860759
76 WAQ 0.651685 0.883117
77 B5V 0.651685 0.906667
78 PR8 0.651685 0.85
79 ITT 0.65 0.943662
80 7D4 0.65 0.905405
81 G5P 0.648936 0.921053
82 XYA 0.647059 0.84507
83 ADN 0.647059 0.84507
84 RAB 0.647059 0.84507
85 1ZZ 0.644444 0.839506
86 ME8 0.644444 0.839506
87 FYA 0.644444 0.905405
88 NB8 0.644444 0.896104
89 TXA 0.644444 0.932432
90 6AD 0.642857 0.909091
91 ADP BMA 0.640449 0.918919
92 G3A 0.638298 0.921053
93 DAL AMP 0.632184 0.905405
94 AFH 0.631579 0.884615
95 9SN 0.630435 0.871795
96 9ZA 0.625 0.907895
97 DQV 0.625 0.958333
98 9ZD 0.625 0.907895
99 GTA 0.625 0.886076
100 YAP 0.623656 0.894737
101 B5M 0.623656 0.894737
102 FA5 0.623656 0.906667
103 B5Y 0.623656 0.894737
104 UP5 0.622449 0.92
105 HFD 0.619048 0.945946
106 XAH 0.617021 0.839506
107 AV2 0.616279 0.917808
108 AOC 0.615385 0.821918
109 48N 0.612245 0.896104
110 4UV 0.610526 0.894737
111 6V0 0.606061 0.896104
112 NAI 0.606061 0.907895
113 DND 0.606061 0.932432
114 NAX 0.606061 0.873418
115 NXX 0.606061 0.932432
116 TXD 0.606061 0.907895
117 5N5 0.605634 0.819444
118 5AS 0.604938 0.77907
119 A4P 0.60396 0.843373
120 DAT 0.60241 0.905405
121 A2R 0.602273 0.985915
122 TXE 0.6 0.907895
123 OMR 0.6 0.851852
124 4UU 0.597938 0.894737
125 GA7 0.597938 0.906667
126 A A 0.597826 0.944444
127 A4D 0.597222 0.819444
128 5CD 0.597222 0.805556
129 AP0 0.594059 0.896104
130 4TC 0.594059 0.896104
131 A3P 0.592593 0.971429
132 T5A 0.592233 0.841463
133 139 0.592233 0.873418
134 7D5 0.592105 0.878378
135 ATP A A A 0.589474 0.930556
136 LAQ 0.585859 0.839506
137 MYR AMP 0.585106 0.817073
138 F2R 0.580952 0.864198
139 YLP 0.58 0.819277
140 UPA 0.578431 0.907895
141 7DD 0.578313 0.985714
142 3AM 0.576923 0.929577
143 ADJ 0.576923 0.851852
144 COD 0.575472 0.811765
145 NAD 0.575472 0.931507
146 3AT 0.574713 0.971831
147 JB6 0.574468 0.883117
148 4UW 0.574257 0.860759
149 EP4 0.573333 0.753247
150 A2P 0.573171 0.957143
151 CNA 0.571429 0.932432
152 TYM 0.568627 0.906667
153 PPS 0.568182 0.873418
154 DTA 0.565789 0.786667
155 M2T 0.565789 0.734177
156 AR6 AR6 0.565657 0.917808
157 A3D 0.564815 0.918919
158 80F 0.564815 0.841463
159 3DH 0.564103 0.773333
160 G5A 0.563218 0.77907
161 YLB 0.563107 0.819277
162 YLC 0.563107 0.839506
163 AMP DBH 0.561224 0.893333
164 TYR AMP 0.561224 0.87013
165 MTA 0.558442 0.773333
166 DTP 0.556818 0.905405
167 AHZ 0.554455 0.817073
168 NA7 0.553191 0.958904
169 IOT 0.552381 0.831325
170 ZAS 0.55 0.766234
171 7MD 0.55 0.8625
172 ARG AMP 0.55 0.829268
173 IMO 0.548781 0.929577
174 YLA 0.54717 0.819277
175 NAE 0.544643 0.894737
176 TAD 0.544554 0.884615
177 A5A 0.544444 0.807229
178 2AM 0.544304 0.943662
179 TSB 0.543478 0.819277
180 6RE 0.54321 0.759494
181 AYB 0.542056 0.809524
182 NAQ 0.539823 0.871795
183 V3L 0.539326 0.971831
184 SSA 0.538462 0.8
185 AF3 ADP 3PG 0.538462 0.8375
186 ZID 0.535088 0.918919
187 LPA AMP 0.533981 0.817073
188 52H 0.532609 0.77907
189 VMS 0.532609 0.788235
190 54H 0.532609 0.788235
191 BTX 0.53211 0.841463
192 A3N 0.53012 0.786667
193 J7C 0.53012 0.769231
194 5X8 0.528736 0.763158
195 BT5 0.527273 0.831325
196 8X1 0.526882 0.752809
197 5CA 0.526882 0.8
198 53H 0.526882 0.77907
199 ARU 0.526316 0.860759
200 EAD 0.525862 0.873418
201 RGT 0.525253 0.958904
202 OVE 0.52439 0.905405
203 S4M 0.52381 0.666667
204 7DT 0.522727 0.985714
205 GDP 0.522222 0.92
206 DDS 0.522222 0.878378
207 AVV 0.521277 0.896104
208 NDE 0.521008 0.932432
209 7MC 0.518868 0.841463
210 DSH 0.518072 0.725
211 MAO 0.517647 0.759036
212 NSS 0.515789 0.8
213 DSZ 0.515789 0.8
214 LSS 0.515789 0.761364
215 P5A 0.515464 0.744444
216 DZD 0.513514 0.884615
217 NVA LMS 0.510417 0.752809
218 9K8 0.510204 0.714286
219 12D 0.509615 0.785714
220 M24 0.508772 0.85
221 YLY 0.508772 0.809524
222 P1H 0.508333 0.851852
223 5AD 0.506849 0.746479
224 GJV 0.505882 0.75
225 LEU LMS 0.505155 0.752809
226 AMP NAD 0.504505 0.905405
227 4TA 0.504505 0.807229
228 G A A A 0.504505 0.871795
229 NAJ PZO 0.504425 0.848101
230 GSU 0.5 0.77907
231 128 0.5 0.776471
232 KAA 0.5 0.752809
233 71V 0.5 0.907895
234 A3G 0.5 0.8
235 NDC 0.5 0.871795
236 7D7 0.5 0.743243
237 N0B 0.495726 0.819277
238 NJP 0.495495 0.945946
239 ODP 0.495495 0.909091
240 2SA 0.494624 0.932432
241 6C6 0.494505 0.881579
242 SFG 0.494382 0.75
243 0WD 0.491071 0.921053
244 YSA 0.490196 0.77907
245 PO4 PO4 A A A A PO4 0.489796 0.902778
246 SAM 0.48913 0.690476
247 6IA 0.48913 0.8375
248 A7D 0.488636 0.776316
249 6FA 0.488 0.841463
250 FB0 0.487805 0.804598
251 NAJ PYZ 0.487179 0.807229
252 A5D 0.483516 0.786667
253 IDP 0.483516 0.918919
254 SA8 0.483516 0.707317
255 PGS 0.483146 0.883117
256 MHZ 0.483146 0.697674
257 DA 0.482353 0.878378
258 D5M 0.482353 0.878378
259 NEC 0.482353 0.746667
260 NIA 0.481928 0.822785
261 Y3J 0.480519 0.726027
262 8PZ 0.480392 0.8
263 FAD 0.480315 0.851852
264 FAS 0.480315 0.851852
265 FDA 0.48 0.833333
266 N6P 0.479592 0.915493
267 GGZ 0.479167 0.825
268 U A 0.478261 0.907895
269 SAH 0.478261 0.74359
270 SAI 0.478261 0.734177
271 A G 0.477876 0.883117
272 NPW 0.477477 0.886076
273 NDP 0.477477 0.921053
274 AAM 0.476744 0.971429
275 C2R 0.47561 0.90411
276 AMZ 0.47561 0.916667
277 A A A 0.474747 0.905405
278 GTP 0.473684 0.92
279 U A G G 0.473684 0.883117
280 SMM 0.473684 0.686047
281 NZQ 0.473214 0.909091
282 TXP 0.473214 0.921053
283 A3S 0.47191 0.810811
284 SFD 0.46875 0.734043
285 AIR 0.468354 0.901408
286 AAT 0.468085 0.707317
287 EEM 0.468085 0.690476
288 J7V 0.466667 0.833333
289 Z5A 0.466667 0.77907
290 7C5 0.466667 0.818182
291 62F 0.465649 0.8625
292 HDV 0.463158 0.893333
293 FAY 0.462121 0.8625
294 A3T 0.461538 0.821918
295 ETB 0.461538 0.833333
296 DCA 0.461538 0.823529
297 A6D 0.46 0.722892
298 A U 0.459459 0.87013
299 GEK 0.459184 0.7375
300 6K6 0.459184 0.930556
301 RFL 0.458647 0.821429
302 NAP 0.458333 0.945205
303 S7M 0.458333 0.690476
304 4YB 0.457944 0.761364
305 WSA 0.454545 0.788235
306 TAP 0.454545 0.907895
307 FNK 0.454545 0.804598
308 COA 0.453782 0.823529
309 0T1 0.453782 0.823529
310 101 0.453488 0.878378
311 XNP 0.452174 0.873418
312 NA0 0.45082 0.932432
313 7RP 0.448276 0.928571
314 GP3 0.446809 0.921053
315 TM1 0.446602 0.77381
316 APU 0.446429 0.894737
317 PUA 0.445378 0.884615
318 V1N 0.443396 0.917808
319 7RA 0.443182 0.957747
320 COS 0.442623 0.804598
321 AMX 0.442623 0.833333
322 30N 0.442623 0.752688
323 CAO 0.442623 0.795455
324 QQY 0.44186 0.815789
325 ACK 0.44186 0.861111
326 649 0.441441 0.744444
327 0UM 0.44 0.698795
328 NHD 0.439655 0.905405
329 CMX 0.439024 0.823529
330 SCO 0.439024 0.823529
331 GCP 0.438776 0.896104
332 8BR 0.438202 0.906667
333 GNH 0.4375 0.907895
334 8Q2 0.4375 0.772727
335 3AD 0.4375 0.805556
336 NVA 2AD 0.43617 0.759494
337 62X 0.435644 0.666667
338 FCX 0.435484 0.795455
339 ACO 0.435484 0.795455
340 FAM 0.435484 0.804598
341 9JJ 0.434783 0.8625
342 GNP 0.434343 0.896104
343 9GM 0.434343 0.896104
344 NMX 0.433071 0.76087
345 MGP 0.43299 0.884615
346 26A 0.432099 0.763158
347 HAX 0.432 0.804598
348 K15 0.431373 0.682353
349 DG1 0.430894 0.921053
350 1DG 0.430894 0.921053
351 QQX 0.430233 0.805195
352 2VA 0.430108 0.8
353 S8M 0.43 0.759494
354 2MC 0.429688 0.769231
355 6G0 0.428571 0.884615
356 P5F 0.428571 0.823529
357 FYN 0.428571 0.823529
358 3KK 0.428571 0.804598
359 A C A C 0.428571 0.848101
360 7L1 0.427419 0.795455
361 FAI 0.426966 0.916667
362 RMB 0.426966 0.873239
363 AS 0.426966 0.833333
364 1RB 0.425287 0.885714
365 CA6 0.425197 0.729167
366 SOP 0.425197 0.804598
367 OXK 0.425197 0.804598
368 MCD 0.425197 0.804598
369 COK 0.425197 0.804598
370 G1R 0.424242 0.907895
371 SXZ 0.423077 0.710843
372 CC5 0.423077 0.816901
373 F2N 0.422535 0.813953
374 EO7 0.422222 0.788235
375 ANZ 0.422018 0.8
376 1VU 0.421875 0.795455
377 CMC 0.421875 0.804598
378 CO6 0.421875 0.804598
379 ZDA 0.421053 0.864865
380 GKE 0.420561 0.884615
381 GDC 0.420561 0.884615
382 GDD 0.420561 0.884615
383 NFD 0.420168 0.883117
384 GSP 0.42 0.873418
385 D3Y 0.42 0.789474
386 MC4 0.419847 0.76087
387 3D1 0.419753 0.773333
388 3L1 0.419753 0.773333
389 FA9 0.41958 0.864198
390 5GP 0.419355 0.906667
391 G 0.419355 0.906667
392 KB1 0.419048 0.698795
393 CAJ 0.418605 0.804598
394 SCD 0.418605 0.823529
395 CMP 0.417582 0.901408
396 2BA 0.417582 0.915493
397 SO8 0.416667 0.789474
398 VRT 0.416667 0.769231
399 N01 0.416667 0.905405
400 IVC 0.415385 0.813953
401 1HE 0.415385 0.786517
402 A1S 0.415385 0.804598
403 BCO 0.415385 0.804598
404 3HC 0.415385 0.813953
405 MLC 0.415385 0.804598
406 NMN AMP PO4 0.415254 0.87013
407 2FA 0.414634 0.813333
408 MGO 0.414141 0.860759
409 3NZ 0.413462 0.782051
410 COO 0.412214 0.804598
411 MCA 0.412214 0.795455
412 YE1 0.412214 0.813953
413 CAA 0.412214 0.813953
414 GAV 0.411765 0.884615
415 PRT 0.411215 0.931507
416 JLN 0.411111 0.890411
417 P2P 0.411111 0.902778
418 ZZB 0.410256 0.77381
419 SP1 0.409091 0.842105
420 RP1 0.409091 0.842105
421 2CP 0.409091 0.795455
422 SCA 0.409091 0.804598
423 103 0.409091 0.837838
424 PAX 0.408 0.829268
425 FAD NBT 0.407143 0.75
426 COW 0.406015 0.795455
427 3CP 0.406015 0.804598
428 IRC 0.406015 0.813953
429 BYC 0.406015 0.804598
430 CA8 0.406015 0.729167
431 1GZ 0.406015 0.795455
432 COF 0.406015 0.786517
433 HGG 0.406015 0.804598
434 2KQ 0.406015 0.786517
435 G2P 0.405941 0.884615
436 SLU 0.404959 0.770115
437 U A C C 0.404959 0.858974
438 RBZ 0.404494 0.849315
439 1CZ 0.404412 0.795455
440 FAQ 0.402985 0.804598
441 BCA 0.402985 0.795455
442 4CA 0.402985 0.795455
443 MTP 0.402439 0.730769
444 8OD 0.402062 0.945205
445 CO7 0.401515 0.804598
446 GRA 0.4 0.804598
447 G2R 0.4 0.884615
448 ENQ 0.4 0.916667
449 CNV FAD 0.4 0.8
450 GMV 0.4 0.896104
451 HXC 0.4 0.786517
452 HF7 0.4 0.893333
Ligand no: 2; Ligand: ASP; Similar ligands found: 32
No: Ligand ECFP6 Tc MDL keys Tc
1 DAS 1 1
2 ASP 1 1
3 ASN 0.636364 0.793103
4 DSN 0.545455 0.714286
5 ABA 0.545455 0.692308
6 2RA 0.545455 0.689655
7 SER 0.545455 0.714286
8 DBB 0.545455 0.692308
9 CYS 0.521739 0.703704
10 C2N 0.521739 0.666667
11 DCY 0.521739 0.703704
12 SD4 0.5 0.648649
13 GGL 0.481481 0.846154
14 DGL 0.481481 0.846154
15 GLU 0.481481 0.846154
16 DAB 0.48 0.612903
17 HSE 0.48 0.758621
18 NVA 0.461538 0.62069
19 HCS 0.461538 0.655172
20 CSO 0.461538 0.6875
21 AS2 0.461538 0.916667
22 LEU 0.461538 0.642857
23 API 0.461538 0.75
24 CSD 0.444444 0.615385
25 CSS 0.444444 0.633333
26 11C 0.433333 0.814815
27 UN1 0.433333 0.814815
28 GLN 0.428571 0.7
29 DGN 0.428571 0.7
30 NPI 0.40625 0.785714
31 NCD 0.4 0.705882
32 ONL 0.4 0.7
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2J0W; Ligand: ASP; Similar sites found with APoc: 211
This union binding pocket(no: 1) in the query (biounit: 2j0w.bio1) has 11 residues
No: Leader PDB Ligand Sequence Similarity
1 4MOP 2H5 1.11359
2 6GAQ FMN 1.2987
3 2X7J TPP 1.3363
4 5I0H ADP BEF 1.55902
5 3C6K SPD 1.5748
6 3C6K MTA 1.5748
7 1J5P NAD 1.58103
8 5OCG GNP 1.5873
9 6ALW BNV 1.73611
10 6ALW BMJ 1.73611
11 4ZY1 4U5 1.78174
12 4IEE AGS 1.78174
13 1SVK ALF GDP 1.983
14 1OXV ANP 1.983
15 4ZG4 VO4 ADP 2.00445
16 3WLV AZA 2.00445
17 5Z99 SLB 2.00445
18 5ZXD ATP 2.00445
19 3QVL 5HY 2.04082
20 5NI5 8YB 2.08333
21 1VAY AZA 2.09059
22 4I42 1HA 2.10526
23 2WLT ASP 2.10843
24 2YCH ATP 2.12202
25 2B8W ALF 5GP 2.13415
26 1RLJ FMN 2.15827
27 1W5T ANP 2.18447
28 1BH2 GSP 2.22222
29 4IP7 FBP 2.22717
30 4UBT 3G6 2.25564
31 5AYV KPL 2.26537
32 4WPF 3SN 2.27273
33 3COW 52H 2.32558
34 1U8Z GDP 2.38095
35 1GVF PGH 2.44755
36 5AOA PPI 2.44755
37 1SQA UI1 2.44898
38 4MIG G3F 2.44989
39 4PFO ADP 2.44989
40 4RD0 GDP 2.44989
41 3QF7 ANP 2.46575
42 1FDJ 13P 2.47934
43 1ORR NAD 2.59366
44 2JK0 ASP 2.67261
45 5X30 4LM 2.76382
46 5X2Z 3LM 2.76382
47 3EWA ANP 2.79503
48 3QUR ADP 2.7972
49 3QUR FM4 2.7972
50 1NJF AGS 2.8
51 2D2F ADP 2.8
52 5F52 ASP 2.89532
53 1DMR PGD 2.89532
54 4ZKD GDP 2.89532
55 5H68 AGS 2.94118
56 3X1Z GNP 2.99401
57 1CR1 TTP 3.04054
58 4EVQ PHB 3.11804
59 2D1S SLU 3.11804
60 3FKQ ATP 3.21716
61 5EXW 7DT 3.25
62 3GYQ SAM 3.30882
63 1G6O ADP 3.33333
64 5VJE GOS 3.35196
65 1EBF NAD 3.35196
66 3ZQ6 ADP ALF 3.39506
67 1Z0A GDP 3.44828
68 3VC3 C6P 3.48837
69 1R18 SAH 3.52423
70 4KQI RBZ 3.56347
71 4KQI NIO 3.56347
72 2JLR ANP 3.56347
73 2WHX ADP 3.56347
74 6B8B ADP 3.56347
75 1RP7 TZD 3.56347
76 3NW7 LGV 3.58306
77 6MB9 COA 3.64964
78 6MB9 NMY 3.64964
79 5MVR ADP 3.7037
80 1EU1 MGD 3.78619
81 4D9C PMP 3.78619
82 6MVU K4V 3.78619
83 2OFW ADX 3.84615
84 1ZCB GDP 3.8674
85 2VNO GAL GAL FUC 3.88889
86 3FSY SCA 3.91566
87 2EXX NAP 3.92157
88 4XXH T6P 3.92157
89 5D6J ATP 4.05405
90 1TU3 GNP 4.09357
91 1R2Q GNP 4.11765
92 2GDJ ANP 4.16667
93 3MJH GTP 4.16667
94 1WDT GTP 4.23163
95 1RJ9 GCP 4.23163
96 3ENV ABF 4.25532
97 2DXU BT5 4.25532
98 1I8T FAD 4.35967
99 2WPU KYT 4.40252
100 1LAN LEU 4.45434
101 4WZ6 ATP 4.48276
102 3CPJ GDP 4.4843
103 4AZ3 S35 4.51613
104 1R0X ATP 4.54545
105 3GFS FMN 4.5977
106 2HT6 GDP 4.5977
107 6FA4 GNP 4.62428
108 1V8K ANP 4.63415
109 1UPA TPP 4.67706
110 2IHU TP9 4.67706
111 2IHT TPP 4.67706
112 4IOK ADP 4.67706
113 1E5F PLP 4.70297
114 1OE0 TTP 4.78261
115 2XTZ GSP 4.80226
116 3Q72 GNP 4.81928
117 1I1N SAH 4.86726
118 1Q3Q ANP 4.89978
119 3IWK NAD 4.89978
120 1TAD GDP 4.93827
121 1TAD ALF 4.93827
122 3QXC ATP 4.95868
123 2R75 01G 5.02959
124 2CBZ ATP 5.06329
125 1HTW ADP 5.06329
126 1H74 ADP 5.06757
127 5AR0 GB8 5.07614
128 2IVF MGD 5.11364
129 3RUV ANP 5.12249
130 2GJ8 ALF GDP 5.23256
131 2HF9 GSP 5.30973
132 5KBF CMP 5.31561
133 5N69 ADP 5.34521
134 1PI5 SM2 5.34521
135 5ZA2 NXL 5.35211
136 2VB6 ADP BEF 5.36913
137 3CIP ATP 5.46875
138 3BFV ADP 5.53506
139 3E5H GNP 5.61798
140 4N82 FMN 5.61798
141 5ESO TDP 5.79065
142 5ESO ISC 5.79065
143 2XCU C5P 5.79065
144 5WLB GNP 5.88235
145 1W7J ADP BEF 5.96026
146 1NF3 GNP 6.15385
147 1JI0 ATP 6.25
148 2ZTS ADP 6.3745
149 1L2T ATP 6.38298
150 3SBD GNP 6.41711
151 1IHU AF3 6.4588
152 1IHU ADP 6.4588
153 1E5D FMN 6.46766
154 6BCA GSP 6.48649
155 2AWN ADP 6.56168
156 3RLF ANP 6.56168
157 4A62 ANP 6.5625
158 2BKX F6R 6.61157
159 1N07 ADP 6.74847
160 1OBV FMN 7.10059
161 4WOP CTP 7.11111
162 5ENZ UDP 7.27273
163 1O2D NAP 7.34967
164 1VHD NAP 7.34967
165 4XQC 13D 7.36842
166 4XQC NAD 7.36842
167 1H65 GDP 7.40741
168 4C3Y ANB 7.57238
169 4C3Y FAD 7.57238
170 2UVO NDG 7.60234
171 2UVO NAG 7.60234
172 5L3S GNP 7.7951
173 3G5S GSH 7.90068
174 4ZNL BEF ADP 8.0292
175 4KVG GTP 8.07692
176 3KTA AP5 8.09249
177 1XEX ATP 8.13953
178 2ODE ALF GDP 8.51064
179 3ZS9 ADP ALF 8.90869
180 3GPO APR 8.92857
181 2GAG FOA 9.09091
182 2GAG FAD 9.09091
183 2FCR FMN 9.24856
184 1IBR GNP 10.4677
185 4HI0 GDP 10.5528
186 4K81 GTP 11.1111
187 2J5V RGP 11.1359
188 2BNF UTP 11.2033
189 2ZX2 RAM 11.2821
190 6D55 GNP 11.3772
191 6D5E GNP 11.3772
192 6D5M GNP 11.3772
193 6D5L GNP 11.3772
194 6BVM GNP 11.3772
195 6D5V GNP 11.3772
196 6D59 GNP 11.3772
197 1NVV GNP 11.4458
198 2UZI GTP 11.4458
199 5XKT GNP 11.5
200 1FQK GDP 11.5646
201 2WCV FUC 12.8571
202 5IRR GSP 12.987
203 2J4K U5P 13.2743
204 3IS2 FAD 13.6364
205 5NUL FMN 13.7681
206 6H39 FGY 14.6341
207 5Z2M GTP 16.4773
208 2PZE ATP 17.9039
209 2V7Q ADP 20
210 1FQJ GDP 21.4286
211 1A2C 34H LEU PRJ OAR 27.7778
Pocket No.: 2; Query (leader) PDB : 2J0W; Ligand: ASP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2j0w.bio1) has 11 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2J0W; Ligand: ADP; Similar sites found with APoc: 41
This union binding pocket(no: 3) in the query (biounit: 2j0w.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
1 4A59 AMP 1.11359
2 5WKC FAD 1.3363
3 2QLU ADE 1.59236
4 4JOB TLA 1.76768
5 2AK3 AMP 1.76991
6 1UDB NAD 1.77515
7 1UDB UFG 1.77515
8 5HVJ ANP 2.53968
9 3QUR FM4 2.7972
10 3QUR ADP 2.7972
11 4JGP PYR 2.89532
12 1YXM ADE 2.89532
13 2H7C SIA 3.11804
14 5ZI9 FLC 3.46154
15 4RF7 ARG 3.56347
16 5Y3N 8MF 3.56347
17 3LL5 ADP 4.01606
18 3LL5 IPE 4.01606
19 3LL5 ATP 4.01606
20 2Q1W NAD 4.5045
21 1NT4 G1P 5.11509
22 3RUV ANP 5.12249
23 5KAX RHQ 5.42169
24 5DQY BEZ 5.71429
25 1GS5 ANP 5.81395
26 1GS5 NLG 5.81395
27 2AKO ADP 6.3745
28 2AWN ADP 6.56168
29 3LL9 ADP 6.69145
30 2WE5 ADP 7.41935
31 1E19 ADP 7.64331
32 2WEL K88 7.95107
33 4WOE 3S5 8.68597
34 3NOJ PYR 8.82353
35 3KIV ACA 8.86076
36 5WXU FLC 10.6904
37 2J4K U5P 13.2743
38 4E3Q PMP 13.363
39 4NDO ATP 14.0741
40 3L4N GSH 14.1732
41 3KO0 TFP 16.8317
Pocket No.: 4; Query (leader) PDB : 2J0W; Ligand: ADP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2j0w.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
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