Receptor
PDB id Resolution Class Description Source Keywords
2PFY 1.95 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF DCTP7, A BORDETELLA PERTUSSIS EXTRACYTOPLASMIC SOLUTE RECEPTOR BINDING PYROGLUTAMIC ACID BORDETELLA PERTUSSIS TOHAMA I EXTRACYTOPLASMIC SOLUTE RECEPTOR TRIPARTITE ATP INDEPENDENT PERIPLASMIC TRANSPORT PYROGLUTAMIC ACID LIGAND BINDING TRANSPORT PROTEIN
Ref.: CRYSTAL STRUCTURES OF TWO BORDETELLA PERTUSSIS PERIPLASMIC RECEPTORS CONTRIBUTE TO DEFINING A NOVEL PYROGLUTAMIC ACID BINDING DCTP SUBFAMILY. J.MOL.BIOL. V. 370 93 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
PCA A:302;
B:302;
C:302;
D:302;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
Kd = 0.3 uM
129.114 C5 H7 N O3 C1CC(...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2PFY 1.95 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF DCTP7, A BORDETELLA PERTUSSIS EXTRACYTOPLASMIC SOLUTE RECEPTOR BINDING PYROGLUTAMIC ACID BORDETELLA PERTUSSIS TOHAMA I EXTRACYTOPLASMIC SOLUTE RECEPTOR TRIPARTITE ATP INDEPENDENT PERIPLASMIC TRANSPORT PYROGLUTAMIC ACID LIGAND BINDING TRANSPORT PROTEIN
Ref.: CRYSTAL STRUCTURES OF TWO BORDETELLA PERTUSSIS PERIPLASMIC RECEPTORS CONTRIBUTE TO DEFINING A NOVEL PYROGLUTAMIC ACID BINDING DCTP SUBFAMILY. J.MOL.BIOL. V. 370 93 2007
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 2PFY Kd = 0.3 uM PCA C5 H7 N O3 C1CC(=O)N[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 2PFY Kd = 0.3 uM PCA C5 H7 N O3 C1CC(=O)N[....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 2PFZ - PCA C5 H7 N O3 C1CC(=O)N[....
2 2PFY Kd = 0.3 uM PCA C5 H7 N O3 C1CC(=O)N[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: PCA; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 PCA 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2PFY; Ligand: PCA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2pfy.bio3) has 11 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 2PFY; Ligand: PCA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2pfy.bio1) has 11 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2PFY; Ligand: PCA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2pfy.bio4) has 11 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2PFY; Ligand: PCA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2pfy.bio2) has 11 residues
No: Leader PDB Ligand Sequence Similarity
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