Receptor
PDB id Resolution Class Description Source Keywords
2PHF 2.1 Å NON-ENZYME: BINDING PTEROCARPUS ANGOLENSIS LECTIN COMPLEXED WITH MAN-6 PTEROCARPUS ANGOLENSIS LECTIN CARBOHYDRATE HIGH MANNOSE SUGAR BINDING PROTEIN
Ref.: HOW A PLANT LECTIN RECOGNIZES HIGH MANNOSE OLIGOSACCHARIDES PLANT PHYSIOL. V. 144 1733 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CA A:256;
B:258;
Part of Protein;
Part of Protein;
none;
none;
submit data
40.078 Ca [Ca+2...
MAN MAN A:253;
Valid;
none;
submit data
342.297 n/a O(C1O...
MAN MAN BMA MAN B:253;
Valid;
none;
submit data
666.579 n/a O(C1O...
MN A:255;
B:257;
Part of Protein;
Part of Protein;
none;
none;
submit data
54.938 Mn [Mn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2PHF 2.1 Å NON-ENZYME: BINDING PTEROCARPUS ANGOLENSIS LECTIN COMPLEXED WITH MAN-6 PTEROCARPUS ANGOLENSIS LECTIN CARBOHYDRATE HIGH MANNOSE SUGAR BINDING PROTEIN
Ref.: HOW A PLANT LECTIN RECOGNIZES HIGH MANNOSE OLIGOSACCHARIDES PLANT PHYSIOL. V. 144 1733 2007
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 473 families.
1 2PHF - MAN MAN n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 355 families.
1 2PHF - MAN MAN n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 272 families.
1 2PHF - MAN MAN n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: MAN MAN; Similar ligands found: 243
No: Ligand ECFP6 Tc MDL keys Tc
1 MAN MAN 1 1
2 BGC BGC 1 1
3 2M4 1 1
4 BMA BMA MAN 0.886364 0.970588
5 MAN MAN BMA 0.808511 1
6 MAN MAN MAN GLC 0.690909 1
7 FUC GAL 0.66 0.941176
8 GAL NAG MAN 0.612903 0.733333
9 MAN NAG GAL 0.612903 0.733333
10 BGC GLC 0.612245 1
11 GLC BGC 0.612245 1
12 B2G 0.612245 1
13 GLA GAL 0.612245 1
14 LAT 0.612245 1
15 GLC GAL 0.612245 1
16 CBK 0.612245 1
17 BGC GAL 0.612245 1
18 MAL MAL 0.612245 0.970588
19 GLA GLA 0.612245 1
20 GAL GLC 0.612245 1
21 BMA GAL 0.612245 1
22 MAB 0.612245 1
23 GAL BGC 0.612245 1
24 CBI 0.612245 1
25 BMA BMA 0.612245 1
26 BGC BMA 0.612245 1
27 LB2 0.612245 1
28 MAN GLC 0.612245 1
29 LBT 0.612245 1
30 N9S 0.612245 1
31 M3M 0.612245 1
32 MAL 0.612245 1
33 TRE 0.595238 1
34 GLA MBG 0.591837 0.942857
35 BGC BGC BGC ASO BGC BGC ASO 0.584906 1
36 GLC BGC BGC BGC BGC BGC BGC 0.584906 1
37 BGC BGC BGC 0.584906 1
38 BGC BGC BGC GLC BGC BGC 0.584906 1
39 BGC BGC BGC BGC BGC 0.584906 1
40 GLC BGC BGC BGC 0.584906 1
41 M6P MAN MAN 0.580645 0.785714
42 BMA MAN MAN 0.571429 1
43 GLA GAL GLC 0.566038 1
44 BGC GLC GLC GLC 0.566038 1
45 GAL GAL GAL 0.566038 1
46 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.566038 1
47 BGC BGC BGC BGC BGC BGC 0.566038 1
48 BMA MAN BMA 0.566038 1
49 GLC BGC BGC BGC BGC 0.566038 1
50 CE6 0.566038 1
51 BGC GLC GLC GLC GLC GLC GLC 0.566038 1
52 MTT 0.566038 1
53 GLC BGC BGC 0.566038 1
54 CEY 0.566038 1
55 MT7 0.566038 1
56 CE5 0.566038 1
57 BMA BMA BMA BMA BMA BMA 0.566038 1
58 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.566038 1
59 BGC BGC BGC GLC 0.566038 1
60 GLC GLC GLC GLC GLC GLC GLC GLC 0.566038 1
61 MLR 0.566038 1
62 BMA BMA BMA 0.566038 1
63 CEX 0.566038 1
64 BGC GLC GLC 0.566038 1
65 CTR 0.566038 1
66 BGC GLC GLC GLC GLC 0.566038 1
67 GLC BGC GLC 0.566038 1
68 CT3 0.566038 1
69 GLC GLC BGC GLC GLC GLC GLC 0.566038 1
70 MAN MAN BMA BMA BMA BMA 0.566038 1
71 CTT 0.566038 1
72 DXI 0.566038 1
73 MAN BMA BMA BMA BMA 0.566038 1
74 GLC GAL GAL 0.566038 1
75 BMA BMA BMA BMA BMA 0.566038 1
76 B4G 0.566038 1
77 MAN BMA BMA 0.566038 1
78 GLC BGC BGC BGC BGC BGC 0.566038 1
79 CE8 0.566038 1
80 GLC GLC GLC GLC GLC GLC GLC 0.566038 1
81 GLC GLC GLC GLC GLC 0.566038 1
82 GLC GLC BGC 0.566038 1
83 LAT GLA 0.56 1
84 MAN BMA BMA BMA BMA BMA 0.553571 0.970588
85 BMA BMA BMA BMA BMA BMA MAN 0.553571 0.970588
86 BGC BGC GLC 0.553571 1
87 MAN NAG 0.551724 0.733333
88 GLA GAL GAL 0.54386 1
89 GLA GAL BGC 0.54386 1
90 GAL GAL FUC 0.542373 0.970588
91 GLA GAL FUC 0.542373 0.970588
92 GLA GLA FUC 0.542373 0.970588
93 FUC GLA GLA 0.542373 0.970588
94 FUC GAL GLA 0.542373 0.970588
95 U63 0.537037 0.891892
96 GAL FUC 0.537037 0.941176
97 RZM 0.528302 0.688889
98 M13 0.528302 0.942857
99 MDM 0.528302 0.942857
100 GAL MBG 0.528302 0.942857
101 DR5 0.528302 0.942857
102 MMA MAN 0.528302 0.942857
103 GLA EGA 0.527273 0.942857
104 DOM 0.518519 0.942857
105 BMA MAN 0.518519 0.914286
106 FMO 0.508772 0.868421
107 A2G GAL 0.508475 0.733333
108 GAL A2G 0.508475 0.733333
109 GAL NGA 0.508475 0.733333
110 BGC BGC BGC BGC BGC BGC BGC BGC 0.508197 1
111 BGC BGC BGC BGC 0.508197 1
112 MAL EDO 0.491228 0.942857
113 GLA MAN ABE 0.484848 0.916667
114 NDG GAL 0.483333 0.733333
115 GAL NDG 0.483333 0.733333
116 NLC 0.483333 0.733333
117 NOJ GLC 0.482759 0.727273
118 AMG 0.478261 0.857143
119 MMA 0.478261 0.857143
120 GYP 0.478261 0.857143
121 MBG 0.478261 0.857143
122 GAL NGA A2G 0.476923 0.673469
123 ABL 0.474576 0.702128
124 MVP 0.474576 0.733333
125 CGC 0.474576 0.941176
126 5QP 0.473684 0.885714
127 FRU GAL 0.473684 0.842105
128 NOY BGC 0.473684 0.75
129 BMA FRU 0.473684 0.842105
130 T6P 0.472727 0.767442
131 GLC GLC GLC GLC GLC GLC 0.46875 1
132 GAL GAL SO4 0.467742 0.702128
133 BMA IFM 0.465517 0.744186
134 MAN MNM 0.465517 0.75
135 IFM BMA 0.465517 0.744186
136 9MR 0.465517 0.744186
137 BGC OXZ 0.465517 0.666667
138 IFM BGC 0.465517 0.744186
139 FUC BGC GAL 0.460317 0.970588
140 G2F BGC BGC BGC BGC BGC 0.460317 0.868421
141 GLA GAL BGC 5VQ 0.459016 0.891892
142 GLC DMJ 0.457627 0.727273
143 MAN DGO 0.448276 0.914286
144 BMA BMA GLA BMA BMA 0.447761 1
145 2GS 0.446809 0.857143
146 GLC GLC XYP 0.446154 1
147 P3M 0.446154 0.767442
148 GAL BGC BGC XYS 0.442857 0.942857
149 GLA GAL NAG 0.441176 0.733333
150 NAG GAL GAL 0.441176 0.733333
151 MAN BMA NAG 0.441176 0.733333
152 MAN MAN MAN MAN 0.439394 1
153 SOR GLC GLC 0.439394 0.970588
154 MAN MAN BMA MAN 0.439394 1
155 MAN 7D1 0.438596 0.888889
156 NAG BMA 0.4375 0.653061
157 GLC GLC GLC GLC 0.4375 1
158 GLA GAL GLC NBU 0.4375 0.846154
159 MAN MAN MAN BMA MAN 0.43662 1
160 8VZ 0.435484 0.673469
161 GAL MGC 0.435484 0.702128
162 GLC GLC GLC BGC 0.432836 1
163 MAN BMA MAN MAN MAN 0.432836 1
164 M5S 0.432836 1
165 MAN 0.431818 0.848485
166 GAL 0.431818 0.848485
167 BMA 0.431818 0.848485
168 ALL 0.431818 0.848485
169 WOO 0.431818 0.848485
170 GXL 0.431818 0.848485
171 GLC 0.431818 0.848485
172 GLA 0.431818 0.848485
173 BGC 0.431818 0.848485
174 GIV 0.431818 0.848485
175 BGC BGC G2F SHG 0.430556 0.846154
176 MLB 0.428571 1
177 BGC GLA 0.428571 1
178 KHO 0.428571 0.888889
179 GLA BGC 0.428571 1
180 MAN BMA 0.428571 1
181 GAL GAL 0.428571 1
182 LAK 0.428571 1
183 GLA GLC 0.428571 1
184 GLA BMA 0.428571 1
185 BMA GLA 0.428571 1
186 SOR GLC GLC GLC 0.426471 0.970588
187 LAG 0.426471 0.6
188 GAL BGC NAG GAL 0.424658 0.733333
189 OXZ BGC BGC 0.424242 0.6875
190 LAT FUC 0.424242 0.970588
191 BGC GAL FUC 0.424242 0.970588
192 FUC GAL GLC 0.424242 0.970588
193 UMQ 0.424242 0.785714
194 GLC GAL FUC 0.424242 0.970588
195 G3I 0.424242 0.767442
196 DMU 0.424242 0.785714
197 LMU 0.424242 0.785714
198 FUC LAT 0.424242 0.970588
199 LMT 0.424242 0.785714
200 G2I 0.424242 0.767442
201 BTU 0.423729 0.842105
202 TUR 0.423729 0.842105
203 LAT NAG GAL 0.418919 0.733333
204 BGC GAL NAG GAL 0.418919 0.733333
205 GAL NAG GAL BGC 0.418919 0.733333
206 BGC GLA GAL FUC 0.416667 0.970588
207 ISX 0.416667 0.761905
208 MAN MMA MAN 0.415385 0.942857
209 NPJ 0.414286 0.622642
210 GLC GLC GLC 0.413793 1
211 MAN MAN MAN 0.413793 1
212 GLC GLC GLC GLC GLC BGC 0.413793 1
213 GLC GLC GLC GLC BGC 0.413793 1
214 NAG GAL GAL NAG GAL 0.413333 0.6875
215 GLC GLC XYS 0.411765 0.970588
216 G1P 0.411765 0.697674
217 ALX 0.411765 0.697674
218 GL1 0.411765 0.697674
219 BNX 0.411765 0.697674
220 M1P 0.411765 0.697674
221 XGP 0.411765 0.697674
222 56N 0.410714 0.833333
223 MAN IFM 0.409836 0.761905
224 GLC IFM 0.409836 0.761905
225 FUC NDG GAL 0.408451 0.717391
226 OPM MAN MAN 0.408451 0.804878
227 GAL NDG FUC 0.408451 0.717391
228 FUC NAG GAL 0.408451 0.717391
229 GAL NAG FUC 0.408451 0.717391
230 GLC GAL NAG GAL 0.407895 0.733333
231 LSE 0.405797 0.6875
232 6UZ 0.405797 0.846154
233 GLC 7LQ 0.403226 0.885714
234 GAL NGT 0.402985 0.66
235 BMA MVL 0.402985 0.6
236 MVL BMA 0.402985 0.6
237 IDC 0.402985 0.6
238 NGT GAL 0.402985 0.66
239 RCB 0.402778 0.622642
240 GLO GLC GLC 0.402778 0.942857
241 GTM BGC BGC 0.4 0.868421
242 GLC GLC BGC XYS BGC XYS 0.4 0.942857
243 10M 0.4 0.733333
Ligand no: 2; Ligand: MAN MAN BMA MAN; Similar ligands found: 177
No: Ligand ECFP6 Tc MDL keys Tc
1 MAN MAN BMA MAN 1 1
2 MAN MAN MAN MAN 1 1
3 MAN BMA MAN MAN MAN 0.852459 1
4 M5S 0.852459 1
5 MAN MAN MAN BMA MAN 0.80303 1
6 MAN MAN MAN 0.736842 1
7 GLC GLC GLC GLC GLC BGC 0.736842 1
8 GLC GLC GLC 0.736842 1
9 GLC GLC GLC GLC BGC 0.736842 1
10 MLB 0.732143 1
11 GLA BGC 0.732143 1
12 MAN BMA 0.732143 1
13 BMA GLA 0.732143 1
14 GLA GLC 0.732143 1
15 GAL GAL 0.732143 1
16 GLA BMA 0.732143 1
17 BGC GLA 0.732143 1
18 LAK 0.732143 1
19 GLC GLC GLC GLC 0.730159 1
20 MAN MMA MAN 0.703125 0.942857
21 MAN MAN MAN BMA MAN MAN MAN 0.675325 0.942857
22 GLC GLC GLC GLC GLC GLC 0.656716 1
23 NAG BMA MAN MAN MAN MAN 0.625 0.733333
24 WZ3 0.611111 0.916667
25 GLC GLC GLC BGC 0.591549 1
26 NAG BMA MAN MAN MAN MAN MAN 0.589744 0.868421
27 FUB AHR AHR 0.583333 0.857143
28 AHR AHR AHR 0.583333 0.857143
29 BMA NAG MAN MAN MAN MAN MAN MAN MAN 0.561798 0.733333
30 AHR AHR 0.559322 0.857143
31 FUB AHR 0.559322 0.857143
32 BMA BMA GLA BMA BMA 0.540541 1
33 MAN H1M MAN 0.533333 0.868421
34 GLC BGC BGC BGC BGC BGC BGC 0.530303 1
35 BGC BGC BGC GLC BGC BGC 0.530303 1
36 BGC BGC BGC BGC BGC 0.530303 1
37 GLC BGC BGC BGC 0.530303 1
38 BGC BGC BGC 0.530303 1
39 BGC BGC BGC ASO BGC BGC ASO 0.530303 1
40 1GN ACY GAL ACY 1GN BGC GAL BGC 0.528736 0.6875
41 AML MAN MAN MAN MAN MAN MAN MAN MAN 0.528736 0.825
42 ACY 1GN GAL 1GN BGC ACY GAL BGC 0.528736 0.6875
43 NAG NAG BMA MAN MAN 0.52809 0.6875
44 MAN MAN NAG MAN NAG 0.52809 0.6875
45 M5G 0.525773 0.6875
46 LB2 0.52381 1
47 M3M 0.52381 1
48 MAN GLC 0.52381 1
49 BMA NGT MAN MAN 0.523256 0.66
50 GLA GAL BGC 0.521739 1
51 GLA GAL GAL 0.521739 1
52 GAL GAL SO4 0.521127 0.702128
53 MAN MMA 0.507692 0.942857
54 BGC BGC BGC BGC BGC BGC BGC BGC 0.493151 1
55 BGC BGC BGC BGC 0.493151 1
56 BMA BMA MAN 0.492537 0.970588
57 M13 0.484848 0.942857
58 MDM 0.484848 0.942857
59 GAL MBG 0.484848 0.942857
60 WZ5 0.483516 0.702128
61 P3M 0.48 0.767442
62 BGC BMA 0.476923 1
63 GLC GAL 0.476923 1
64 LBT 0.476923 1
65 GLC BGC 0.476923 1
66 GLA GAL 0.476923 1
67 MAB 0.476923 1
68 BMA BMA 0.476923 1
69 BGC GAL 0.476923 1
70 LAT 0.476923 1
71 N9S 0.476923 1
72 CBI 0.476923 1
73 GLA GLA 0.476923 1
74 BGC GLC 0.476923 1
75 B2G 0.476923 1
76 GAL GLC 0.476923 1
77 CBK 0.476923 1
78 GAL BGC 0.476923 1
79 MAL 0.476923 1
80 BMA GAL 0.476923 1
81 MAL MAL 0.476923 0.970588
82 NAG NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.470588 0.6875
83 NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.469388 0.673469
84 MAN MAN MAN GLC 0.466667 1
85 BMA BMA BMA BMA BMA BMA MAN 0.464789 0.970588
86 MAN BMA BMA BMA BMA BMA 0.464789 0.970588
87 BGC BGC GLC 0.464789 1
88 OPM MAN MAN 0.4625 0.804878
89 BMA MAN MAN 0.458333 1
90 GLC GAL GAL 0.449275 1
91 MAN MAN BMA BMA BMA BMA 0.449275 1
92 GLC BGC GLC 0.449275 1
93 BGC GLC GLC GLC GLC 0.449275 1
94 GLA GAL GLC 0.449275 1
95 GLC BGC BGC BGC BGC BGC 0.449275 1
96 MAN BMA BMA 0.449275 1
97 BGC GLC GLC 0.449275 1
98 CEY 0.449275 1
99 DXI 0.449275 1
100 BMA BMA BMA BMA BMA 0.449275 1
101 MLR 0.449275 1
102 CEX 0.449275 1
103 CTT 0.449275 1
104 B4G 0.449275 1
105 GLC GLC GLC GLC GLC GLC GLC 0.449275 1
106 GLC GLC BGC 0.449275 1
107 CTR 0.449275 1
108 BMA BMA BMA 0.449275 1
109 GLC GLC GLC GLC GLC 0.449275 1
110 CT3 0.449275 1
111 GLC GLC BGC GLC GLC GLC GLC 0.449275 1
112 GLC BGC BGC 0.449275 1
113 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.449275 1
114 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.449275 1
115 GLC BGC BGC BGC BGC 0.449275 1
116 BMA MAN BMA 0.449275 1
117 CE5 0.449275 1
118 MTT 0.449275 1
119 BGC GLC GLC GLC 0.449275 1
120 CE8 0.449275 1
121 BGC GLC GLC GLC GLC GLC GLC 0.449275 1
122 BMA BMA BMA BMA BMA BMA 0.449275 1
123 GAL GAL GAL 0.449275 1
124 MAN BMA BMA BMA BMA 0.449275 1
125 BGC BGC BGC GLC 0.449275 1
126 BGC BGC BGC BGC BGC BGC 0.449275 1
127 GLC GLC GLC GLC GLC GLC GLC GLC 0.449275 1
128 MT7 0.449275 1
129 CE6 0.449275 1
130 KDO MAN MAN MAN MAN MAN 0.446602 0.868421
131 NAG MAN BMA 0.440476 0.733333
132 NAG MAN MAN 0.440476 0.733333
133 2M4 0.439394 1
134 MAN MAN 0.439394 1
135 BGC BGC 0.439394 1
136 NAG NAG BMA MAN MAN MAN MAN 0.433962 0.634615
137 NAG MAN GAL MAN MAN NAG GAL 0.431579 0.6875
138 MAN MAN MAN MAN MAN MAN MAN MAN 0.430108 0.846154
139 GAL FUC 0.428571 0.941176
140 CGC 0.424658 0.941176
141 TRE 0.423729 1
142 GAL BGC NAG GAL 0.423529 0.733333
143 6SA 0.423077 0.733333
144 GLA EGA 0.422535 0.942857
145 GLC BGC BGC BGC XYS BGC XYS XYS 0.422222 0.916667
146 GAL BGC BGC XYS 0.421687 0.942857
147 NAG MAN GAL BMA NDG MAN NAG GAL 0.42 0.673469
148 NAG MAN GAL BMA NAG MAN NAG GAL 0.42 0.673469
149 NAG MAN MAN MAN NAG GAL NAG GAL 0.42 0.673469
150 MAN BMA NAG NAG MAN NAG GAL GAL 0.42 0.673469
151 NAG GAL GAL 0.419753 0.733333
152 GLA GAL NAG 0.419753 0.733333
153 MAN BMA NAG 0.419753 0.733333
154 GLC GLC BGC XYS BGC XYS 0.418605 0.942857
155 RAF 0.417722 0.891892
156 FRU GLC GLA 0.417722 0.891892
157 MAN MAN BMA 0.416667 1
158 IAB 0.414141 0.733333
159 6PZ ACY ACY BGC GAL 1GN 1GN ACY GAL GAL ACY BGC 0.413223 0.611111
160 ACY ACY 6PZ BGC GAL 1GN ACY 1GN GAL GAL ACY BGC 0.413223 0.611111
161 BGC BGC XYS BGC 0.411765 0.942857
162 6PZ BGC GAL 1GN 1GN ACY GAL GAL ACY BGC 0.409836 0.611111
163 AXR BXY BXY BXX 0.409639 0.789474
164 BGC BGC BGC XYS BGC BGC 0.409091 0.942857
165 XYS BGC BGC BGC BGC XYS BGC BGC BGC 0.409091 0.942857
166 XYS BGC BGC XYS BGC XYS BGC BGC BGC 0.409091 0.942857
167 U63 0.408451 0.891892
168 GLA GLA FUC 0.402597 0.970588
169 FUC GAL GLA 0.402597 0.970588
170 GLA GAL FUC 0.402597 0.970588
171 FUC GLA GLA 0.402597 0.970588
172 GAL GAL FUC 0.402597 0.970588
173 GAL NAG GAL BGC 0.402299 0.733333
174 LAT NAG GAL 0.402299 0.733333
175 BGC GAL NAG GAL 0.402299 0.733333
176 NAG MAN BMA NDG MAN NAG GAL 0.4 0.673469
177 T6P 0.4 0.767442
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2PHF; Ligand: MAN MAN; Similar sites found: 89
This union binding pocket(no: 1) in the query (biounit: 2phf.bio1) has 14 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5N53 8NB 0.01249 0.40277 None
2 5OFW 9TW 0.009519 0.40531 1.34529
3 3CTY FAD 0.03204 0.42262 1.5674
4 1L1Q 9DA 0.0136 0.41587 1.6129
5 3KLJ FAD 0.01324 0.43323 1.98413
6 4AT0 FAD 0.02909 0.42733 1.98413
7 2IHT TPP 0.02992 0.40568 1.98413
8 1S7G NAD 0.04199 0.4039 1.98413
9 3SQP FAD 0.01682 0.48043 2.38095
10 4PFW MAN MAN BMA BMA BMA BMA 0.02788 0.4168 2.38095
11 1WG8 SAM 0.02338 0.40698 2.38095
12 1V59 FAD 0.00819 0.45646 2.77778
13 1U1J MET 0.003221 0.41929 2.77778
14 1JIL 485 0.04163 0.41544 2.77778
15 2C49 ANP 0.0274 0.40182 2.77778
16 4IVG ANP 0.03316 0.40052 2.77778
17 1FL2 FAD 0.01787 0.43233 3.1746
18 1I9G SAM 0.007495 0.43092 3.1746
19 5TQZ GLC 0.000000931 0.61276 3.33333
20 1HXD BTN 0.008268 0.42696 3.57143
21 1DJN ADP 0.03139 0.40178 3.57143
22 2B9W FAD 0.02574 0.43533 3.96825
23 1RP0 AHZ 0.02201 0.42019 3.96825
24 3ZEU AGS 0.01069 0.42297 4.45104
25 3ZEU ADP 0.009414 0.42032 4.45104
26 3MYU VIB 0.008425 0.40105 4.65116
27 1GET NAP 0.01026 0.46515 4.7619
28 4H4D 10E 0.00264 0.44135 4.7619
29 3TKA SAM 0.02709 0.40208 4.7619
30 3BY8 MLT 0.01107 0.40464 4.92958
31 2RAB NAD 0.006689 0.47461 5.15873
32 2RAB FAD 0.003708 0.47461 5.15873
33 4YNU LGC 0.01707 0.44111 5.15873
34 3ZBQ GDP 0.01616 0.41202 5.15873
35 3MAX LLX 0.02922 0.40485 5.15873
36 5TE1 7A2 0.007289 0.40429 5.15873
37 1X7D NAD 0.03763 0.40417 5.15873
38 4USR FAD 0.01103 0.4375 5.55556
39 1BC5 SAH 0.01856 0.41374 5.55556
40 1F06 2NP 0.04039 0.40801 5.55556
41 1F06 NDP 0.04039 0.40801 5.55556
42 3IID APR 0.03885 0.40221 5.6872
43 4BV6 FAD 0.01911 0.43257 5.95238
44 1OFD FMN 0.0275 0.41817 5.95238
45 2CKM AA7 0.04752 0.41056 5.95238
46 1OFD AKG 0.04764 0.40305 5.95238
47 3HVJ 705 0.04364 0.40908 6.33484
48 3IES M24 0.0274 0.41721 6.34921
49 2XVF FAD 0.03909 0.41173 6.34921
50 3RIY NAD 0.03471 0.40724 6.34921
51 3LL2 MAN MAN MAN MAN MAN MAN MAN MAN 0.001121 0.45979 6.50407
52 2GUC MAN 0.00000006906 0.65586 6.55738
53 2NU5 NAG 0.00000009298 0.64803 6.55738
54 2HYR BGC GLC 0.0000001369 0.632 6.55738
55 2NUO BGC 0.0000006627 0.58195 6.55738
56 2GUE NAG 0.000001968 0.5083 6.55738
57 2GUD MAN 0.00000008965 0.50035 6.55738
58 2HYQ MAN MAN 0.000003288 0.47686 6.55738
59 2GUD BMA 0.000001024 0.46956 6.55738
60 2XVE FAD 0.03735 0.42921 6.74603
61 2BTO GTP 0.02659 0.407 6.74603
62 2PXX SAH 0.02585 0.4015 6.74603
63 3VY6 BGC BGC 0.0000006225 0.47593 7.0922
64 4B5P ACO 0.0297 0.40717 7.14286
65 3Q87 SAM 0.004159 0.44753 7.2
66 1SQL GUN 0.01361 0.40045 7.53425
67 3LAD FAD 0.007966 0.45444 7.53968
68 1VBH PEP 0.02852 0.4054 7.53968
69 3H8V ATP 0.02367 0.40175 7.53968
70 1DCP HBI 0.01205 0.40994 7.69231
71 4C3Y FAD 0.0123 0.44219 7.93651
72 4C3Y ANB 0.01753 0.43889 7.93651
73 2JFQ DGL 0.01437 0.40245 8.33333
74 2X6T NAP 0.04132 0.40314 9.12698
75 2PHN GDP 0.02547 0.40655 9.52381
76 1NV8 SAM 0.02533 0.41339 10.7143
77 1NV8 MEQ 0.024 0.41339 10.7143
78 5EYP GTP 0.004277 0.45158 11.1111
79 4LNU GTP 0.004679 0.44953 11.1111
80 3RYC GDP 0.0237 0.40963 11.1111
81 2HQM FAD 0.007408 0.45618 11.5079
82 2VVM FAD 0.02174 0.42857 11.5079
83 1N4W FAD 0.03338 0.42082 11.9048
84 2GAG NAD 0.0411 0.41052 12.3016
85 4AKB GAL 0.006092 0.42834 12.782
86 4J56 FAD 0.006075 0.46276 18.4211
87 2DUR MAN MAN 0.0000164 0.56737 19.8413
88 4ZNO SUC 0.000009386 0.55429 21.0317
89 2F5Z FAD 0.04907 0.41142 25
Pocket No.: 2; Query (leader) PDB : 2PHF; Ligand: MAN MAN BMA MAN; Similar sites found: 75
This union binding pocket(no: 2) in the query (biounit: 2phf.bio1) has 15 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5N53 8NB 0.01256 0.40464 None
2 1V2X SAM 0.01259 0.41305 1.03093
3 5OFW 9TW 0.006739 0.41901 1.34529
4 1VDC FAD 0.04955 0.41051 1.5873
5 4AT0 FAD 0.03984 0.41576 1.98413
6 3SQP FAD 0.02123 0.46991 2.38095
7 1V59 FAD 0.007468 0.45384 2.77778
8 3NC9 TR3 0.01459 0.43176 2.77778
9 2C49 ANP 0.008376 0.42366 2.77778
10 4IVG ANP 0.01751 0.41072 2.77778
11 1U1J MET 0.004883 0.41011 2.77778
12 3AI7 TPP 0.02368 0.40689 2.77778
13 1B8O IMH 0.02511 0.40558 2.77778
14 2JGV ADP 0.009154 0.40488 2.77778
15 1FL2 FAD 0.03412 0.41289 3.1746
16 5TQZ GLC 0.0000009605 0.61801 3.33333
17 1MO9 KPC 0.002793 0.49823 3.96825
18 2B9W FAD 0.02401 0.4329 3.96825
19 5UAO FAD 0.03203 0.41527 3.96825
20 1RP0 AHZ 0.03725 0.40393 3.96825
21 3ZEU ADP 0.0089 0.41875 4.45104
22 3ZEU AGS 0.01167 0.41644 4.45104
23 1FEC FAD 0.01055 0.44656 4.7619
24 4H4D 10E 0.002416 0.43777 4.7619
25 1YY5 FAD 0.03392 0.41729 4.7619
26 1RSG FAD 0.0333 0.41608 4.7619
27 1PS9 FAD 0.04521 0.40799 4.7619
28 3BY8 MLT 0.01357 0.40398 4.92958
29 2RAB NAD 0.009016 0.46244 5.15873
30 2RAB FAD 0.004984 0.46244 5.15873
31 4YNU LGC 0.03042 0.42297 5.15873
32 4DSG UDP 0.04219 0.42232 5.15873
33 4DSG FAD 0.04321 0.42232 5.15873
34 4EMJ FAD 0.04681 0.40544 5.15873
35 1LYX PGA 0.01283 0.4049 5.15873
36 1H82 GZZ 0.03647 0.4259 5.55556
37 4USR FAD 0.01643 0.42379 5.55556
38 1TUU ADP 0.01199 0.40384 5.55556
39 3GD4 FAD 0.04107 0.42115 5.95238
40 1OFD FMN 0.02203 0.41921 5.95238
41 1OFD AKG 0.02038 0.41887 5.95238
42 3RIY NAD 0.03438 0.40352 6.34921
43 3LL2 MAN MAN MAN MAN MAN MAN MAN MAN 0.000581 0.46762 6.50407
44 2GUC MAN 0.0000000753 0.66293 6.55738
45 2NU5 NAG 0.00000009829 0.65641 6.55738
46 2HYR BGC GLC 0.0000001635 0.63556 6.55738
47 2NUO BGC 0.0000007121 0.58706 6.55738
48 2GUE NAG 0.000002728 0.49554 6.55738
49 2GUD MAN 0.00000009503 0.48508 6.55738
50 2HYQ MAN MAN 0.000005462 0.45801 6.55738
51 2GUD BMA 0.000001132 0.45621 6.55738
52 2XVE FAD 0.04616 0.4201 6.74603
53 3VY6 BGC BGC 0.0000005755 0.46521 7.0922
54 4JAL SAH 0.02068 0.40052 7.18563
55 3LAD FAD 0.007039 0.45253 7.53968
56 3HGM ATP 0.02266 0.40192 8.84354
57 2PHN GDP 0.01384 0.41591 9.52381
58 2GVC FAD 0.03372 0.4073 9.52381
59 2IV2 MGD 0.04764 0.40228 9.92064
60 5EYP GTP 0.005705 0.44001 11.1111
61 4LNU GTP 0.009162 0.42946 11.1111
62 5EYP GDP 0.01221 0.42442 11.1111
63 3RYC GDP 0.0112 0.42211 11.1111
64 3RYC GTP 0.02856 0.40891 11.1111
65 2HQM FAD 0.009632 0.44521 11.5079
66 2VVM FAD 0.01026 0.44187 11.5079
67 2GAG NAD 0.02158 0.4217 12.3016
68 4QBK 3NZ 0.009083 0.40759 12.6984
69 4AKB GAL 0.008977 0.41389 12.782
70 4FWE FAD 0.02133 0.42744 14.6825
71 3L9R L9Q 0.04389 0.4012 15.3061
72 4J56 FAD 0.00439 0.46542 18.4211
73 2DUR MAN MAN 0.00001517 0.57468 19.8413
74 4ZNO SUC 0.000008108 0.56246 21.0317
75 2F5Z FAD 0.03873 0.41413 25
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