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Receptor
PDB id Resolution Class Description Source Keywords
2PN6 1.44 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF S32A OF ST1022-GLN COMPLEX FROM SULFOLO TOKODAII SULFOLOBUS TOKODAII TRANSCRIPTIONAL REGULATOR LRP/ASNC FAMILY GLN BINDING ST10STRUCTURAL GENOMICS NPPSFA NATIONAL PROJECT ON PROTEIN STAND FUNCTIONAL ANALYSES RIKEN STRUCTURAL GENOMICS/PROTEOMIINITIATIVE RSGI TRANSCRIPTION
Ref.: CRYSTAL STRUCTURE OF GLUTAMINE RECEPTOR PROTEIN FRO SULFOLOBUS TOKODAII STRAIN 7 IN COMPLEX WITH ITS EF L-GLUTAMINE: IMPLICATIONS OF EFFECTOR BINDING IN MO ASSOCIATION AND DNA BINDING NUCLEIC ACIDS RES. V. 36 4808 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GLN A:1002;
Valid;
none;
submit data
146.144 C5 H10 N2 O3 C(CC(...
MG A:1001;
Invalid;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2PN6 1.44 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF S32A OF ST1022-GLN COMPLEX FROM SULFOLO TOKODAII SULFOLOBUS TOKODAII TRANSCRIPTIONAL REGULATOR LRP/ASNC FAMILY GLN BINDING ST10STRUCTURAL GENOMICS NPPSFA NATIONAL PROJECT ON PROTEIN STAND FUNCTIONAL ANALYSES RIKEN STRUCTURAL GENOMICS/PROTEOMIINITIATIVE RSGI TRANSCRIPTION
Ref.: CRYSTAL STRUCTURE OF GLUTAMINE RECEPTOR PROTEIN FRO SULFOLOBUS TOKODAII STRAIN 7 IN COMPLEX WITH ITS EF L-GLUTAMINE: IMPLICATIONS OF EFFECTOR BINDING IN MO ASSOCIATION AND DNA BINDING NUCLEIC ACIDS RES. V. 36 4808 2008
Members (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 291 families.
1 2PMH - GLN C5 H10 N2 O3 C(CC(=O)N)....
2 2EFP - GLN C5 H10 N2 O3 C(CC(=O)N)....
3 2E7X - GLN C5 H10 N2 O3 C(CC(=O)N)....
4 2E7W - GLN C5 H10 N2 O3 C(CC(=O)N)....
5 2PN6 - GLN C5 H10 N2 O3 C(CC(=O)N)....
6 2YX7 - GLN C5 H10 N2 O3 C(CC(=O)N)....
7 2YX4 - GLN C5 H10 N2 O3 C(CC(=O)N)....
70% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 247 families.
1 2PMH - GLN C5 H10 N2 O3 C(CC(=O)N)....
2 2EFP - GLN C5 H10 N2 O3 C(CC(=O)N)....
3 2E7X - GLN C5 H10 N2 O3 C(CC(=O)N)....
4 2E7W - GLN C5 H10 N2 O3 C(CC(=O)N)....
5 2PN6 - GLN C5 H10 N2 O3 C(CC(=O)N)....
6 2YX7 - GLN C5 H10 N2 O3 C(CC(=O)N)....
7 2YX4 - GLN C5 H10 N2 O3 C(CC(=O)N)....
50% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 2PMH - GLN C5 H10 N2 O3 C(CC(=O)N)....
2 2EFP - GLN C5 H10 N2 O3 C(CC(=O)N)....
3 2E7X - GLN C5 H10 N2 O3 C(CC(=O)N)....
4 2E7W - GLN C5 H10 N2 O3 C(CC(=O)N)....
5 2PN6 - GLN C5 H10 N2 O3 C(CC(=O)N)....
6 2YX7 - GLN C5 H10 N2 O3 C(CC(=O)N)....
7 2YX4 - GLN C5 H10 N2 O3 C(CC(=O)N)....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GLN; Similar ligands found: 34
No: Ligand ECFP6 Tc MDL keys Tc
1 GLN 1 1
2 DGN 1 1
3 GGL 0.62963 0.821429
4 GLU 0.62963 0.821429
5 DGL 0.62963 0.821429
6 ONL 0.586207 0.741935
7 HGA 0.53125 0.75
8 DAB 0.518519 0.65625
9 HSE 0.518519 0.6875
10 MEQ 0.515152 0.870968
11 API 0.5 0.793103
12 NVA 0.5 0.666667
13 HCS 0.5 0.645161
14 ASN 0.481481 0.833333
15 UN1 0.46875 0.793103
16 11C 0.46875 0.793103
17 ABA 0.461538 0.62069
18 DBB 0.461538 0.62069
19 ORN 0.451613 0.677419
20 C2N 0.444444 0.6
21 NPI 0.441176 0.766667
22 NLE 0.4375 0.625
23 26P 0.428571 0.71875
24 ASP 0.428571 0.7
25 DAS 0.428571 0.7
26 3GC 0.425 0.794118
27 DLY 0.424242 0.65625
28 DHH 0.411765 0.709677
29 LYS 0.411765 0.636364
30 BGT 0.405405 0.685714
31 2NP 0.405405 0.611111
32 AS2 0.4 0.75
33 3O3 0.4 0.666667
34 ONH 0.4 0.605263
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2PN6; Ligand: GLN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2pn6.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 2PN6; Ligand: GLN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2pn6.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2PN6; Ligand: GLN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2pn6.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2PN6; Ligand: GLN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2pn6.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2PN6; Ligand: GLN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 2pn6.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 2PN6; Ligand: GLN; Similar sites found with APoc: 21
This union binding pocket(no: 6) in the query (biounit: 2pn6.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
1 5WHT SIA None
2 5NC1 NAG None
3 2RDG NDG FUC SIA GAL None
4 3JUC PCA None
5 2WBV SIA 1.33333
6 5A96 GTP 2.66667
7 1HBK COA 4.49438
8 6FX2 FUC C4W NAG BMA MAN NAG GAL 4.65116
9 4DS0 A2G GAL NAG FUC 4.66667
10 4GLW NMN 5.33333
11 4O1M NAD 6
12 6DZN AE3 6.19469
13 3F5A SIA GAL NAG 6.66667
14 2DXU BT5 6.66667
15 2HSA FMN 6.66667
16 1KQR MNA 6.66667
17 2P3I MNA 6.66667
18 1XSE NDP 8.66667
19 1XF1 CIT 12.6667
20 4TVD BGC 27.3333
21 2E1A MSE 41.3333
Pocket No.: 7; Query (leader) PDB : 2PN6; Ligand: GLN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 2pn6.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 2PN6; Ligand: GLN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 2pn6.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
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