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Receptor
PDB id Resolution Class Description Source Keywords
2PUL 2 Å EC: 2.7.1.100 STRUCTURES OF 5-METHYLTHIORIBOSE KINASE REVEAL SUBSTRATE SPECIFICITY AND UNUSUAL MODE OF NUCLEOTIDE BINDING BACILLUS SUBTILIS 5-METHYLTHIORIBOSE KINASE METHIONINE RECYCLING PATHWAY TRANSFERASE
Ref.: STRUCTURES OF 5-METHYLTHIORIBOSE KINASE REVEAL SUBSTRATE SPECIFICITY AND UNUSUAL MODE OF NUCLEOTIDE BINDING J.BIOL.CHEM. V. 282 22195 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ACP A:999;
B:999;
Valid;
Valid;
none;
none;
submit data
505.208 C11 H18 N5 O12 P3 c1nc(...
CPS A:777;
Invalid;
none;
submit data
614.877 C32 H58 N2 O7 S C[C@H...
MG A:400;
B:400;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2PUL 2 Å EC: 2.7.1.100 STRUCTURES OF 5-METHYLTHIORIBOSE KINASE REVEAL SUBSTRATE SPECIFICITY AND UNUSUAL MODE OF NUCLEOTIDE BINDING BACILLUS SUBTILIS 5-METHYLTHIORIBOSE KINASE METHIONINE RECYCLING PATHWAY TRANSFERASE
Ref.: STRUCTURES OF 5-METHYLTHIORIBOSE KINASE REVEAL SUBSTRATE SPECIFICITY AND UNUSUAL MODE OF NUCLEOTIDE BINDING J.BIOL.CHEM. V. 282 22195 2007
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 2PUL - ACP C11 H18 N5 O12 P3 c1nc(c2c(n....
2 2PUN - SR1 C6 H12 O4 S CSC[C@@H]1....
3 2OLC - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
4 2PUI - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 2PUL - ACP C11 H18 N5 O12 P3 c1nc(c2c(n....
2 2PUN - SR1 C6 H12 O4 S CSC[C@@H]1....
3 2OLC - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
4 2PUI - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 2PUL - ACP C11 H18 N5 O12 P3 c1nc(c2c(n....
2 2PUN - SR1 C6 H12 O4 S CSC[C@@H]1....
3 2OLC - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
4 2PUI - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
5 2PYW - SR1 C6 H12 O4 S CSC[C@@H]1....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ACP; Similar ligands found: 368
No: Ligand ECFP6 Tc MDL keys Tc
1 ACP 1 1
2 ACQ 0.866667 1
3 A2D 0.857143 0.945205
4 6YZ 0.833333 1
5 BA3 0.833333 0.945205
6 AP5 0.821918 0.945205
7 B4P 0.821918 0.945205
8 ADP 0.821918 0.972222
9 AT4 0.810811 0.933333
10 AN2 0.810811 0.958904
11 AP2 0.808219 0.986301
12 A12 0.808219 0.986301
13 M33 0.8 0.932432
14 HEJ 0.789474 0.972222
15 ATP 0.789474 0.972222
16 5FA 0.779221 0.972222
17 AR6 0.779221 0.945205
18 AQP 0.779221 0.972222
19 APR 0.779221 0.945205
20 AGS 0.769231 0.921053
21 SAP 0.769231 0.921053
22 AD9 0.769231 0.945946
23 AMP 0.763889 0.944444
24 A 0.763889 0.944444
25 APC 0.75641 0.986301
26 CA0 0.753247 0.92
27 ADX 0.753247 0.851852
28 ANP 0.75 0.945946
29 50T 0.74359 0.932432
30 PRX 0.734177 0.87013
31 ABM 0.733333 0.893333
32 ATF 0.731707 0.933333
33 SRA 0.706667 0.894737
34 A22 0.705882 0.958904
35 RBY 0.703704 0.959459
36 ADV 0.703704 0.959459
37 5AL 0.698795 0.906667
38 A3R 0.689655 0.909091
39 A1R 0.689655 0.909091
40 ADQ 0.689655 0.92
41 AU1 0.6875 0.945946
42 TAT 0.686747 0.933333
43 T99 0.686747 0.933333
44 SRP 0.682353 0.907895
45 9X8 0.674157 0.896104
46 OAD 0.674157 0.92
47 4TC 0.673469 0.922078
48 4AD 0.670455 0.921053
49 AMO 0.670455 0.933333
50 00A 0.662921 0.860759
51 ADP PO3 0.662651 0.917808
52 3OD 0.659341 0.92
53 BIS 0.659341 0.909091
54 25A 0.659091 0.945205
55 OOB 0.659091 0.906667
56 8QN 0.659091 0.906667
57 5SV 0.659091 0.82716
58 SON 0.654321 0.933333
59 25L 0.652174 0.958904
60 PAJ 0.651685 0.8625
61 DLL 0.644444 0.906667
62 AHX 0.644444 0.897436
63 TXA 0.641304 0.907895
64 3UK 0.637363 0.894737
65 ALF ADP 0.632184 0.848101
66 ADP ALF 0.632184 0.848101
67 PR8 0.630435 0.851852
68 WAQ 0.630435 0.884615
69 B5V 0.630435 0.883117
70 LAD 0.630435 0.8625
71 MAP 0.629214 0.921053
72 LMS 0.628205 0.807229
73 GAP 0.627907 0.87013
74 VO4 ADP 0.625 0.906667
75 ADP VO4 0.625 0.906667
76 PTJ 0.623656 0.873418
77 FYA 0.623656 0.906667
78 ME8 0.623656 0.841463
79 1ZZ 0.623656 0.819277
80 NB8 0.623656 0.897436
81 UP5 0.62 0.896104
82 G3A 0.618557 0.897436
83 G5P 0.612245 0.897436
84 AFH 0.612245 0.886076
85 9SN 0.610526 0.85
86 DQV 0.606061 0.932432
87 GTA 0.606061 0.864198
88 9ZD 0.604396 0.884615
89 9ZA 0.604396 0.884615
90 YAP 0.604167 0.896104
91 FA5 0.604167 0.907895
92 B5Y 0.604167 0.871795
93 B5M 0.604167 0.871795
94 TXD 0.60396 0.884615
95 XAH 0.597938 0.841463
96 ADN 0.597222 0.821918
97 RAB 0.597222 0.821918
98 XYA 0.597222 0.821918
99 GA7 0.59596 0.907895
100 48N 0.594059 0.897436
101 DAL AMP 0.593407 0.881579
102 2A5 0.593023 0.92
103 AOC 0.592593 0.8
104 4UV 0.591837 0.871795
105 NXX 0.588235 0.907895
106 6V0 0.588235 0.873418
107 NAX 0.588235 0.875
108 DND 0.588235 0.907895
109 NAI 0.588235 0.884615
110 ATR 0.586207 0.944444
111 PAP 0.586207 0.958333
112 ADP BMA 0.585106 0.894737
113 LAQ 0.584158 0.819277
114 5AS 0.583333 0.761364
115 OMR 0.582524 0.831325
116 TXE 0.582524 0.884615
117 5N5 0.581081 0.797297
118 4UU 0.58 0.871795
119 A A 0.578947 0.918919
120 7D3 0.578313 0.881579
121 AP0 0.576923 0.873418
122 A4D 0.573333 0.797297
123 5CD 0.573333 0.783784
124 JB6 0.572917 0.884615
125 4UW 0.572816 0.839506
126 A4P 0.571429 0.823529
127 CNA 0.570093 0.907895
128 ITT 0.569767 0.917808
129 7D4 0.569767 0.881579
130 A2R 0.565217 0.958904
131 M2T 0.564103 0.716049
132 YLP 0.563107 0.821429
133 139 0.560748 0.851852
134 ADJ 0.560748 0.831325
135 T5A 0.560748 0.843373
136 TAD 0.558824 0.910256
137 ATP A A A 0.555556 0.905405
138 A3P 0.552941 0.944444
139 TYM 0.552381 0.907895
140 IOT 0.551402 0.833333
141 EP4 0.551282 0.734177
142 MYR AMP 0.55102 0.797619
143 F2R 0.550459 0.865854
144 7D5 0.55 0.855263
145 A3D 0.54955 0.894737
146 80F 0.54955 0.843373
147 GCP 0.548387 0.922078
148 UPA 0.54717 0.884615
149 YLC 0.54717 0.841463
150 YLB 0.54717 0.821429
151 NAD 0.545455 0.906667
152 COD 0.545455 0.813953
153 G5A 0.544444 0.781609
154 HFD 0.544444 0.921053
155 DTA 0.544304 0.766234
156 3DH 0.54321 0.753247
157 DZD 0.540541 0.910256
158 AHZ 0.538462 0.797619
159 MTA 0.5375 0.753247
160 3AM 0.536585 0.90411
161 A2P 0.534884 0.930556
162 AR6 AR6 0.533981 0.893333
163 PPS 0.532609 0.851852
164 6AD 0.532609 0.886076
165 YLA 0.53211 0.821429
166 TYR AMP 0.529412 0.871795
167 AMP DBH 0.529412 0.87013
168 AYB 0.527273 0.811765
169 A5A 0.526882 0.788235
170 TSB 0.526316 0.8
171 6RE 0.52381 0.7625
172 S4M 0.523256 0.670455
173 SSA 0.521277 0.802326
174 NA7 0.520408 0.959459
175 7MD 0.519231 0.864198
176 ARG AMP 0.519231 0.831325
177 LPA AMP 0.518868 0.797619
178 BTX 0.517857 0.843373
179 NAE 0.517241 0.871795
180 54H 0.515789 0.770115
181 52H 0.515789 0.761364
182 VMS 0.515789 0.770115
183 BT5 0.513274 0.833333
184 NAQ 0.512821 0.85
185 ZAS 0.511905 0.746835
186 J7C 0.511628 0.772152
187 A3N 0.511628 0.766234
188 IMO 0.511628 0.90411
189 AV2 0.510638 0.893333
190 53H 0.510417 0.761364
191 8X1 0.510417 0.755556
192 5CA 0.510417 0.802326
193 ARU 0.510204 0.839506
194 AF3 ADP 3PG 0.509259 0.839506
195 M24 0.508621 0.829268
196 ZID 0.508475 0.894737
197 2AM 0.506024 0.917808
198 V3L 0.505376 0.945205
199 3AT 0.505376 0.972222
200 AVV 0.505155 0.897436
201 NSS 0.5 0.802326
202 EAD 0.5 0.851852
203 DSZ 0.5 0.802326
204 MAO 0.5 0.761905
205 LSS 0.5 0.764045
206 DSH 0.5 0.728395
207 P5A 0.5 0.747253
208 YLY 0.495726 0.811765
209 9K8 0.49505 0.698925
210 NVA LMS 0.494949 0.755556
211 DAT 0.494505 0.906667
212 5X8 0.494505 0.766234
213 AMP NAD 0.491228 0.881579
214 7MC 0.490909 0.843373
215 LEU LMS 0.49 0.755556
216 SMM 0.489583 0.689655
217 SAM 0.489362 0.694118
218 DTP 0.489362 0.906667
219 7DD 0.488889 0.958333
220 GJV 0.488636 0.753086
221 OVE 0.488372 0.881579
222 5AD 0.486842 0.726027
223 GSU 0.485149 0.781609
224 KAA 0.485149 0.755556
225 P1H 0.483871 0.831325
226 NDE 0.483871 0.907895
227 N0B 0.483333 0.821429
228 A3G 0.482759 0.802632
229 NAJ PZO 0.478632 0.82716
230 4TA 0.478261 0.809524
231 SFG 0.478261 0.753247
232 NDC 0.47619 0.85
233 YSA 0.47619 0.781609
234 FB0 0.47619 0.827586
235 7DT 0.473118 0.958333
236 A7D 0.472527 0.779221
237 NJP 0.469565 0.921053
238 FDA 0.46875 0.835294
239 SA8 0.468085 0.710843
240 A5D 0.468085 0.766234
241 MHZ 0.467391 0.701149
242 8PZ 0.466667 0.802326
243 71V 0.466667 0.884615
244 G A A A 0.465517 0.85
245 0WD 0.465517 0.897436
246 6FA 0.465116 0.843373
247 GGZ 0.464646 0.804878
248 SAI 0.463158 0.7375
249 SAH 0.463158 0.746835
250 6C6 0.463158 0.883117
251 NAJ PYZ 0.46281 0.788235
252 Y3J 0.4625 0.706667
253 7D7 0.461538 0.723684
254 TXP 0.46087 0.897436
255 PO4 PO4 A A A A PO4 0.460784 0.878378
256 S7M 0.459184 0.694118
257 6IA 0.458333 0.839506
258 DDS 0.458333 0.855263
259 FAS 0.458015 0.853659
260 FAD 0.458015 0.853659
261 SFD 0.458015 0.736842
262 ODP 0.456897 0.886076
263 A3S 0.456522 0.813333
264 U A 0.453782 0.884615
265 7C5 0.453704 0.797468
266 EEM 0.453608 0.694118
267 AAT 0.453608 0.710843
268 A G 0.452991 0.860759
269 RGT 0.45283 0.933333
270 NPW 0.452174 0.8875
271 NDP 0.452174 0.897436
272 FAY 0.451852 0.864198
273 PGS 0.451613 0.860759
274 D5M 0.449438 0.88
275 DA 0.449438 0.88
276 NEC 0.449438 0.727273
277 U A G G 0.449153 0.860759
278 2SA 0.44898 0.933333
279 NIA 0.448276 0.802469
280 NZQ 0.448276 0.910256
281 A U 0.447368 0.848101
282 A3T 0.446809 0.8
283 A A A 0.446602 0.906667
284 128 0.446429 0.758621
285 6K6 0.445545 0.905405
286 GEK 0.445545 0.740741
287 4YB 0.445455 0.764045
288 AAM 0.444444 0.944444
289 FNK 0.444444 0.806818
290 62F 0.444444 0.864198
291 Z5A 0.443548 0.761364
292 WSA 0.442478 0.790698
293 AMZ 0.44186 0.891892
294 C2R 0.44186 0.88
295 12D 0.441441 0.767442
296 XNP 0.440678 0.851852
297 RFL 0.437956 0.823529
298 62X 0.436893 0.670455
299 N6P 0.436893 0.890411
300 AIR 0.433735 0.876712
301 GP3 0.43299 0.897436
302 A6D 0.432692 0.705882
303 V1N 0.431193 0.893333
304 649 0.429825 0.747253
305 GP2 0.428571 0.910256
306 GDP 0.428571 0.896104
307 NA0 0.428571 0.907895
308 0UM 0.427184 0.702381
309 ETB 0.42623 0.835294
310 DCA 0.42623 0.825581
311 8Q2 0.426087 0.775281
312 9JJ 0.425532 0.841463
313 GNH 0.424242 0.884615
314 NAP 0.424 0.92
315 PUA 0.422764 0.8625
316 APU 0.422414 0.871795
317 101 0.422222 0.855263
318 3AD 0.421687 0.808219
319 FA9 0.42069 0.865854
320 TAP 0.420635 0.884615
321 TM1 0.420561 0.755814
322 P5F 0.41958 0.825581
323 0T1 0.419355 0.825581
324 COA 0.419355 0.825581
325 K15 0.419048 0.686047
326 7RP 0.417582 0.902778
327 S8M 0.417476 0.7625
328 NHD 0.416667 0.881579
329 GTP 0.415842 0.896104
330 FCX 0.414062 0.797753
331 F2N 0.413793 0.816092
332 AS 0.413043 0.835443
333 7RA 0.413043 0.931507
334 G1R 0.411765 0.884615
335 SXZ 0.411215 0.714286
336 ACK 0.411111 0.837838
337 QQY 0.411111 0.794872
338 CAO 0.409449 0.797753
339 COS 0.409449 0.806818
340 DG1 0.409449 0.897436
341 30N 0.409449 0.755319
342 AMX 0.409449 0.835294
343 1DG 0.409449 0.897436
344 J7V 0.409449 0.813953
345 EO7 0.408602 0.770115
346 8BR 0.408602 0.883117
347 NVA 2AD 0.408163 0.7625
348 D3Y 0.407767 0.792208
349 GSP 0.407767 0.851852
350 9GM 0.407767 0.873418
351 GNP 0.407767 0.873418
352 G2P 0.407767 0.910256
353 CC5 0.407407 0.819444
354 KB1 0.407407 0.702381
355 N01 0.406504 0.881579
356 A C A C 0.406504 0.82716
357 SCO 0.40625 0.825581
358 CMX 0.40625 0.825581
359 HDV 0.405941 0.87013
360 CMP 0.404255 0.876712
361 2BA 0.404255 0.890411
362 ACO 0.403101 0.797753
363 FAM 0.403101 0.806818
364 2VA 0.402062 0.779221
365 3NZ 0.401869 0.78481
366 HAX 0.4 0.806818
367 QQX 0.4 0.78481
368 26A 0.4 0.74359
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2PUL; Ligand: ACP; Similar sites found with APoc: 565
This union binding pocket(no: 1) in the query (biounit: 2pul.bio2) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 2RIO ADP 1.25945
2 1ZGS XMM 1.25945
3 3V4S ATP 1.29199
4 3V4S ADP 1.29199
5 3ORQ ADP 1.32626
6 1PHK ATP 1.34228
7 5WNL STU 1.46199
8 3FSY SCA 1.50602
9 4UAL 3FV 1.51134
10 2JLD AG1 1.51134
11 4YZC STU 1.51134
12 4Z87 5GP 1.51134
13 3LXK MI1 1.52905
14 2WU6 DKI 1.5748
15 3ZRM ZRM 1.61725
16 5MJA 7O3 1.63934
17 4L3L 5FI 1.64474
18 2R3A SAM 1.66667
19 3F7Z 34O 1.71429
20 1O9U ADZ 1.71429
21 2WA4 069 1.7192
22 3UDZ ADP 1.76322
23 5OES ADP 1.76322
24 2VPQ ANP 1.76322
25 6ES0 BW8 1.76322
26 3KAL ADP 1.76322
27 6FL8 TIY 1.76322
28 6FL8 ADP 1.76322
29 5DXT 5H5 1.76322
30 4Y85 499 1.80723
31 5EYK 5U5 1.81159
32 5HCY 60D 1.81269
33 3UIM ANP 1.84049
34 4NM5 ADP 1.85676
35 4JR7 GNP 1.87166
36 5EKO N17 1.88679
37 3GC8 B45 1.89189
38 4X7Q 3YR 1.92308
39 5JKG 6LF 1.92926
40 1ZTH ADP 1.93798
41 1ZP9 ATP 1.93798
42 3RE4 TO1 1.93798
43 2R7K AMZ 1.93906
44 2R7K ACP 1.93906
45 4IJP 1EH 1.95531
46 5A5W GUO 1.97628
47 4ASE AV9 1.983
48 3IGO ANP 2.01511
49 4ONA UW1 2.01511
50 5CKW ANP 2.01511
51 2YW2 ATP 2.01511
52 3OV6 MK0 2.01511
53 2Y6O 1N1 2.06186
54 3BP1 GUN 2.06897
55 3PP0 03Q 2.07101
56 4BTK DTQ 2.07715
57 4NFE BEN 2.1097
58 4G17 0VN 2.12121
59 4E93 GUI 2.12202
60 4CLI 5P8 2.14067
61 1Q8Y ADP 2.14477
62 1Q8Y ADE 2.14477
63 4K33 ACP 2.15385
64 6AC9 ANP 2.16216
65 3TKI S25 2.16718
66 2HY0 306 2.17391
67 1CM8 ANP 2.17984
68 3PN1 IVH 2.20126
69 2F57 23D 2.2082
70 2YAB AMP 2.21607
71 3RI1 3RH 2.23642
72 5UR1 YY9 2.2508
73 3ETH ATP 2.25352
74 4NFN 2KC 2.26537
75 3V8S 0HD 2.267
76 4O1P ANP 2.267
77 1PK8 ATP 2.267
78 3X01 AMP 2.267
79 4CYI ATP 2.267
80 3DNT ATP 2.267
81 4RDL FUC GAL NDG FUC 2.27273
82 1YB5 NAP 2.2792
83 1OBD ATP 2.28758
84 1O5Q PYR 2.29508
85 5C03 AGS 2.33918
86 3HAV ATP 2.34114
87 4ZGP ADP 2.38908
88 4OH4 ANP 2.4024
89 5DBX ANP 2.43902
90 3AKK ADP 2.46154
91 4RFR RHN 2.46305
92 5DMZ ADP 2.46575
93 1XXR MAN 2.48447
94 3K5I AIR 2.51889
95 5VLQ ANP 2.51889
96 3K5I ADP 2.51889
97 4TM3 FAD 2.51889
98 4WOV 3SM 2.52366
99 1ZZ7 S0H 2.52525
100 3SCH TB6 2.52525
101 5M06 ADP 2.53623
102 4LCN GNG 2.53807
103 1KJ8 ATP 2.55754
104 1KJ8 GAR 2.55754
105 4EN4 GT1 2.5641
106 4EN4 ATP 2.5641
107 4EN4 GT0 2.5641
108 2Q7D ANP 2.60116
109 5ZCT ANP 2.61438
110 3SLS ANP 2.63158
111 5V22 SAH 2.6936
112 5LPB ADP 2.7027
113 6F3G CJN 2.71186
114 4N70 2HX 2.7439
115 4WAS NAP 2.74725
116 3DAK ANP 2.75862
117 4H3P ANP 2.76243
118 5BVE 4VG 2.77008
119 5N87 N66 2.77078
120 2H8H H8H 2.77078
121 3HMO STU 2.77078
122 1M0W ANP 2.77078
123 5VZ0 ADP 2.77078
124 5OLK DTP 2.77078
125 3VHE 42Q 2.78552
126 2WEI VGG 2.78746
127 2YAK OSV 2.80702
128 4IDT T28 2.80899
129 5A6N U7E 2.82686
130 2RIF AMP 2.83688
131 1DKU AP2 2.83912
132 5QIN J2V 2.8481
133 3CY2 MB9 2.86624
134 5JLB SAH 2.86738
135 4FMU 0UM 2.8777
136 6C0T EE4 2.88184
137 2OFV 242 2.88809
138 3BZ3 YAM 2.89855
139 4I4Z 2NE 2.90909
140 5AX9 4KT 2.92208
141 5HES 032 2.9316
142 6E8I PTR 2.95858
143 2HK5 1BM 2.96296
144 3ZGJ RMN 2.96496
145 1ST0 GTG 2.96736
146 3ILR IXD 2.97297
147 3ILR SGN 2.97297
148 2XVD AS6 2.98013
149 4P25 FUC GAL NAG FUC 2.98013
150 5CEO 50D 3
151 1H5Q NAP 3.01887
152 3HZT J60 3.02267
153 5ZTN CUR 3.02267
154 4FL3 ANP 3.02267
155 6C1S EFV 3.02267
156 5AE9 OKO 3.02267
157 6EZ6 C5Z 3.02267
158 6A5K SAM 3.02267
159 1NJJ GET 3.02267
160 3TM0 ANP 3.04183
161 3TM0 B31 3.04183
162 3ALN ANP 3.0581
163 5JBX COA 3.06513
164 5XVG 8FX 3.07167
165 4UXL 5P8 3.10559
166 4DFU QUE 3.10559
167 5C4L 4XR 3.11526
168 5C4L SIS 3.11526
169 2B9I ADP 3.11615
170 2B9F ADP 3.11615
171 2B9J ADP 3.11615
172 2B9H ADP 3.11615
173 4AG8 AXI 3.16456
174 3GNI ATP 3.22581
175 1BYG STU 3.23741
176 5NKB 8ZT 3.26797
177 4EWH T77 3.27273
178 5Y86 HRM 3.27456
179 3TTI KBI 3.27456
180 4U98 ACP 3.27456
181 2IO8 ADP 3.27456
182 5K2M ADP 3.2967
183 4CTA ATP 3.29949
184 1UF5 CDT 3.30033
185 6BXI ANP 3.3033
186 4KBA 1QM 3.32326
187 5W4W 9WG 3.32326
188 4P5Z Q7M 3.3241
189 6CUZ FEV 3.35052
190 4WHZ 3NL 3.37662
191 2ZL7 FUC GAL NGA 3.38983
192 5FI4 5XV 3.40557
193 4OCV ANP 3.43008
194 2XOC ADP 3.44828
195 5VC5 96M 3.46021
196 3C1X CKK 3.48525
197 6GWR FEW 3.49206
198 5LXT ACP 3.4965
199 5OKT 9XK 3.50318
200 4IZY 1J2 3.52304
201 2F2U M77 3.52645
202 5DZT AMP 3.52645
203 4UWH JXM 3.52645
204 3VOT ADP 3.52645
205 5IM3 DTP 3.52645
206 1QM5 GLC GLC GLC PO4 SGC GLC 3.52645
207 1OUK 084 3.55191
208 3VPD ANP 3.55872
209 4UX9 ANP 3.57143
210 3SJ7 NDP 3.57143
211 3PTG 932 3.58127
212 5IH9 6BF 3.58209
213 6D61 4AA 3.58974
214 4BFM ANP 3.59281
215 5C1P ADP 3.59477
216 5C1P DAL DAL 3.59477
217 1S68 AMP 3.61446
218 1ZY5 ANP 3.63036
219 1T36 ADP 3.66492
220 4QTB 38Z 3.68421
221 2Y88 2ER 3.68852
222 3C0G 3AM 3.7037
223 5JZJ AN2 3.7037
224 5FQK 6NT 3.71747
225 5T8O 76Z 3.72493
226 4UDK NDG 3.7464
227 2QX0 PH2 3.77358
228 1Y57 MPZ 3.77834
229 1OPK P16 3.77834
230 2J62 GSZ 3.77834
231 4DC2 ADE 3.78788
232 1E4E ADP 3.79009
233 5JGA 6KC 3.80952
234 5U6C 7YS 3.80952
235 5I35 ANP 3.81679
236 5OMY 9YE 3.83632
237 1IYB 5GP 3.84615
238 1OFZ FUL 3.84615
239 1OFZ FUC 3.84615
240 4H3Q ANP 3.8674
241 4M69 ANP 3.88693
242 4BHN BH9 3.89222
243 3VPB ADP 3.90071
244 3VPC ADP 3.90071
245 3TDV GDP 3.92157
246 2DTJ THR 3.93258
247 3AB4 THR 3.93258
248 4GJ3 0XP 3.97351
249 3WO0 ALA 4.03023
250 3WO0 ADP 4.03023
251 2BMB PMM 4.03023
252 4PU5 ANP 4.03023
253 2HGS ADP 4.03023
254 6F6D AKG 4.03023
255 5TDF ADP 4.03023
256 1UA4 AMP 4.03023
257 3V1S 0LH 4.03727
258 2CSN CKI 4.0404
259 5X8I SQZ 4.04624
260 5AWM ANP 4.06091
261 4EUU BX7 4.07523
262 5EOB 5QQ 4.07523
263 2OO8 RAJ 4.10095
264 3D91 REM 4.10557
265 6G33 5ID 4.12979
266 6FYV 3NG 4.1543
267 4LOO SB4 4.15512
268 2WQN ADP 4.19355
269 3RYC GTP 4.1958
270 4OCJ NDG 4.22164
271 5LI1 ANP 4.23729
272 3TXO 07U 4.24929
273 1RL4 BL5 4.25532
274 5GZ9 ANP 4.2623
275 5EH0 5NW 4.26357
276 5LI9 ACP 4.28571
277 2J7T 274 4.30464
278 3KN5 ANP 4.30769
279 4FE2 ADP 4.31373
280 4NW6 2NS 4.33437
281 4C5N PXL 4.34783
282 2Z7R STU 4.36137
283 3LXN MI1 4.40252
284 6E2O S0L 4.40678
285 2IF8 ADP 4.40771
286 5YF9 NIO 4.42478
287 4FG8 ATP 4.44444
288 3PE2 E1B 4.45104
289 2X2M X2M 4.4586
290 4E1Z 0MX 4.46735
291 1EHI ADP 4.50928
292 1V0O INR 4.51389
293 4XQC 13D 4.53401
294 4XQC NAD 4.53401
295 2PVN P63 4.54545
296 5KO1 6UY 4.59364
297 4USF 6UI 4.60526
298 4JGP PYR 4.60829
299 1K3A ACP 4.68227
300 3E8N ATP 4.69208
301 3E8N VRA 4.69208
302 5KTI TRE 6X6 4.69799
303 3TII ANP 4.73684
304 4CS9 AMP 4.7619
305 3KRL KRL 4.77612
306 4GYI ADP 4.78589
307 4Y93 746 4.78589
308 5YK1 ANP 4.78589
309 3VSV XYS 4.78589
310 6EOM ALA LYS 4.78589
311 4XV1 904 4.79452
312 4KS7 X4Z 4.79452
313 5WBF LAC 4.81482
314 4QMN DB8 4.83871
315 2AQX ATP 4.84429
316 1I7L ATP 4.85437
317 4IX4 ADP 4.85714
318 6GQM F8H 4.87805
319 4AUA 4AU 4.88599
320 2GUD MAN 4.91803
321 2NU5 NAG 4.91803
322 2GUC MAN 4.91803
323 2HYR BGC GLC 4.91803
324 2GUD BMA 4.91803
325 2NUO BGC 4.91803
326 2HYQ MAN MAN 4.91803
327 5LXB 7A9 4.95868
328 4L9I 8PR 4.96032
329 5WO4 B7V 4.96689
330 5IXH OTP 4.96894
331 4CQE CQE 5.03597
332 2YRX AMP 5.03778
333 5M60 BGC 5.03778
334 5DEY 59T 5.05051
335 4U0I 0LI 5.07937
336 5DH3 5BS 5.07937
337 6GZD LCI 5.08021
338 4CSV STI 5.09091
339 4NZN ANP 5.15152
340 4NZN 2OU 5.15152
341 6CGD GNP 5.2459
342 6CGD AKN 5.2459
343 4CRL C1I 5.26316
344 4RFM 3P6 5.26316
345 5EQY 5RA 5.28967
346 3GGF GVD 5.31561
347 1ZX5 LFR 5.33333
348 1VBO MAN 5.36913
349 5ML3 DL3 5.36913
350 3MKN DNB 5.37975
351 4AU8 Z3R 5.40541
352 4Z4P SAH 5.42169
353 3AQV TAK 5.43478
354 2VQ5 HBA 5.47264
355 1UNH IXM 5.47945
356 2GQR ADP 5.48523
357 2GQS ADP 5.48523
358 6FYL 3NG 5.50964
359 5JFS 6K0 5.51948
360 4WB7 ATP 5.54156
361 2QF7 AGS 5.54156
362 4TVD BGC 5.54156
363 2CFM AMP 5.54156
364 4OTH DRN 5.57185
365 6G34 5ID 5.60224
366 4OUC 5ID 5.60224
367 2R5T ANP 5.63003
368 1TMM APC 5.6962
369 1TMM HHR 5.6962
370 5LPZ ADP 5.72289
371 3GQI ACP 5.75221
372 5VCV 1N1 5.78778
373 3ORK AGS 5.78778
374 3VRY B43 5.79345
375 2QK4 ATP 5.79345
376 4CME NAP 5.90278
377 5EW9 5VC 5.90406
378 4YMJ 4EJ 5.92105
379 4JLS 3ZE 5.92105
380 4I42 1HA 5.96491
381 3M2W L8I 6.02007
382 4G31 0WH 6.02007
383 1U5R ATP 6.03448
384 3WVR AMP 6.04534
385 4NJH 2K8 6.08696
386 4NJH SAM 6.08696
387 1JPA ANP 6.08974
388 1RGE 2GP 6.25
389 1RE8 BD2 6.28571
390 2QCS ANP 6.28571
391 4WB6 ATP 6.28571
392 3IDB ANP 6.28571
393 3FHI ANP 6.28571
394 4PNI KQQ 6.29723
395 3PDT ADP 6.29723
396 3LOO B4P 6.30137
397 1TQP ATP 6.38298
398 5TO8 7FM 6.38298
399 1W2D 4IP 6.41509
400 1W2D ADP 6.41509
401 6BFN DL1 6.43275
402 2GU8 796 6.52819
403 2V7O DRN 6.54762
404 4OAV ACP 6.54912
405 2VQD AP2 6.54912
406 1VJY 460 6.60066
407 4C2V YJA 6.66667
408 4AT3 LTI 6.68896
409 5LNE A2G GAL 6.70732
410 1IA9 ANP 6.78571
411 3KFF ZBT 6.79012
412 3KFF XBT 6.79012
413 4WNK 453 6.80101
414 4MV1 ADP 6.80101
415 4C2W ANP 6.81004
416 3E5A VX6 6.81818
417 6C7Y ADP 6.83761
418 2WBV SIA 6.87831
419 3Q60 ATP 7.00809
420 5FBN 5WF 7.01107
421 3QWI NAP 7.03704
422 4AZW ATP 7.0529
423 2V58 LZJ 7.0529
424 3VY6 BGC BGC 7.0922
425 3DLS ADP 7.16418
426 1TZD ADP 7.27273
427 3GC0 AMP 7.29483
428 4DOO DAO 7.31707
429 3VHH VHH 7.31707
430 2QLU ADE 7.32484
431 3PLS ANP 7.38255
432 4XZ3 ACP 7.3913
433 2XK9 XK9 7.45342
434 4WW7 AMP 7.48663
435 3E7O 35F 7.5
436 4A4X JUP 7.52688
437 4MNS 2AX 7.54717
438 6FTB M0E 7.61905
439 4Y8D 49J 7.64706
440 4I94 ANP 7.66667
441 2XG5 EC5 7.79817
442 2XG5 EC2 7.79817
443 1KZN CBN 7.80488
444 1NHX FTB 7.80856
445 1NHX PEP 7.80856
446 4XYM A12 7.82609
447 5LXM ADP 7.89474
448 1GSA ADP 7.91139
449 2FB3 MET 7.94118
450 2CFC KPC 8
451 4YZN 4K5 8.01394
452 2AGC DAO 8.02469
453 1U59 STU 8.06045
454 2QL9 CIT 8.09249
455 4ZS4 ATP 8.14332
456 1C3M MAN MAN 8.16327
457 4CC6 L5Y 8.1761
458 3H9R TAK 8.18182
459 4GLW 0XT 8.19672
460 2P7Q GG6 8.27068
461 4LRJ ANP 8.28402
462 5USZ SKE 8.3045
463 5MY8 RXZ 8.35509
464 5TA6 79D 8.37989
465 4TWP AXI 8.48709
466 5Y80 IRE 8.6262
467 1Z2P I3S 8.64198
468 1Z2P ACP 8.64198
469 3RWP ABQ 8.68167
470 5LVP ATP 8.68167
471 3LQV ADE 8.69565
472 3O0G 3O0 8.72483
473 2BKK ADP 8.87574
474 3W0O HY0 8.88252
475 3W0O ADP 8.88252
476 1SQL GUN 8.90411
477 5HQ0 LZ9 8.9404
478 6GU6 1QK 8.9404
479 3FC2 IBI 8.95522
480 6GIN IR2 8.9701
481 6CMJ F6J 9.34579
482 5G1X ADP 9.52381
483 4PZ6 GMP 9.52381
484 6H8S FSZ 9.63455
485 4U44 3D9 9.63855
486 4O4F IHP 9.67742
487 4O4F ATP 9.67742
488 6DW2 HD4 9.70464
489 5AVF TAU 9.72763
490 4H6B 10Y 9.74359
491 1QY1 PRZ 9.77011
492 3NW7 LGV 9.77199
493 3G5D 1N1 9.79021
494 1IOW PHY 9.80392
495 1IOW ADP 9.80392
496 5UIU 8CG 9.90712
497 2ZV2 609 10.0671
498 5ZZ6 NAD 10.0962
499 4R78 AMP 10.356
500 5UPK ANP 10.4167
501 5HVJ ANP 10.4762
502 3K0T BGC 10.4895
503 5ETR 5RW 10.559
504 5ETR APC 10.559
505 4JOB TLA 10.6061
506 2WEL K88 10.7034
507 4Q5H ANP 10.9195
508 3FHR P4O 11.0119
509 2JDR GLY ARG PRO ARG THR THR SER PHE ALA GLU 11.1111
510 2JDR L20 11.1111
511 4F9C 0SX 11.1111
512 5L8L ADP 11.1111
513 4XH0 ADP 11.335
514 5DRB 5FJ 11.3402
515 3DGY 2GP 11.3402
516 3MVH WFE 11.4035
517 2A19 ANP 11.4286
518 4LH7 1X8 11.4551
519 2VZ6 FEF 11.5016
520 1ONI BEZ 11.5942
521 2VN9 GVD 11.6279
522 5MW8 ATP 11.8388
523 3SXS PP2 11.9403
524 5A89 FMN 12.1795
525 4Y0X ADP 12.5945
526 2PZI AXX 12.5945
527 3SRV S19 12.6354
528 4QM9 CYS 12.7168
529 4F4P 0SB 12.8205
530 4CNG SAH 12.9412
531 5ODT ADP 13.0435
532 1NBU PH2 13.4454
533 3ZLR X0B 13.9241
534 6CZ3 FLJ 14.0152
535 1AUX AGS 14.4695
536 3NX2 FER 14.881
537 1CBK ROI 15
538 4I6H 1C8 15.5844
539 5EFQ ADP 15.6716
540 4NST ADP 15.6716
541 6A1G 9OL 15.8333
542 1IR3 ANP 16.3399
543 5H2U 1N1 16.4794
544 2BPM 529 16.5049
545 4CFU 2WC 16.8317
546 6GUE FB8 16.8874
547 4BCM T7Z 16.9435
548 4BCQ TJF 16.9435
549 4BCN T9N 17
550 2XMY CDK 17.1141
551 5LMK 6ZK 17.1717
552 4WNP 3RJ 17.4216
553 2DT9 THR 17.9641
554 3I0O ADP 17.9941
555 3EKK GS2 18.8925
556 1XJD STU 19.1436
557 1OIK AKG 19.6013
558 6FLZ MMA 20.1389
559 6CQF F97 21.5488
560 3PVW QRX 21.9144
561 5UKL SIX 21.9144
562 1KR3 113 24.1379
563 3BU5 ATP 26.6667
564 3KMW ATP 27.1318
565 2PVF ACP 40
Pocket No.: 2; Query (leader) PDB : 2PUL; Ligand: ACP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2pul.bio2) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2PUL; Ligand: ACP; Similar sites found with APoc: 33
This union binding pocket(no: 3) in the query (biounit: 2pul.bio2) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 1VBH PEP 1.51134
2 1OS7 AKG 1.76678
3 4YRD 3IT 1.94986
4 3VC1 GST 2.5641
5 3VC1 SAH 2.5641
6 5N0F 7K2 2.77078
7 4GN8 ASO 3.01003
8 4K10 NI9 3.31492
9 6F9G PUT 3.42679
10 1F6D UDP 3.45745
11 6G9I CXX 3.57143
12 3TY5 ATP 3.77834
13 5BO9 SIA GAL NGS 4.02477
14 5W0N UPU 4.28212
15 4C5N ACP 4.34783
16 5IGI GMP 4.65116
17 5IGI ZIT 4.65116
18 4XMF HSM 4.8913
19 5G6U YJM 4.98084
20 5LA1 XYP 5.03778
21 3SHR CMP 5.35117
22 1VBO MAN MAN MAN 5.36913
23 5HWK BEZ 5.41667
24 3KV8 FAH 5.7554
25 6E1Q CFA 5.79345
26 3JQ7 NAP 5.90278
27 5JDI NAP 5.90278
28 3JQ8 NAP 5.90278
29 3BMN NAP 5.90278
30 1KC7 PPR 8.06045
31 5WL1 CUY 8.08081
32 1JXZ BCA 8.92193
33 4NC7 I3C 9.09091
Pocket No.: 4; Query (leader) PDB : 2PUL; Ligand: ACP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2pul.bio2) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2PUL; Ligand: ACP; Similar sites found with APoc: 2
This union binding pocket(no: 5) in the query (biounit: 2pul.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 3BF8 MLA 7.45098
2 2IOR ADP 14.8936
Pocket No.: 6; Query (leader) PDB : 2PUL; Ligand: ACP; Similar sites found with APoc: 3
This union binding pocket(no: 6) in the query (biounit: 2pul.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 1RM0 NAI 2.77078
2 5LXT GDP 3.4965
3 3O5N BR0 4.46429
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