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Receptor
PDB id Resolution Class Description Source Keywords
2Q46 1.8 Å NON-ENZYME: OTHER ENSEMBLE REFINEMENT OF THE PROTEIN CRYSTAL STRUCTURE OF GENE FROM ARABIDOPSIS THALIANA AT5G02240 ARABIDOPSIS THALIANA ENSEMBLE REFINEMENT REFINEMENT METHODOLOGY DEVELOPMENT AT5NADP STRUCTURAL GENOMICS PROTEIN STRUCTURE INITIATIVE PSFOR EUKARYOTIC STRUCTURAL GENOMICS CESG UNKNOWN FUNCTION
Ref.: ENSEMBLE REFINEMENT OF PROTEIN CRYSTAL STRUCTURES: VALIDATION AND APPLICATION. STRUCTURE V. 15 1040 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAP A:800;
B:801;
Valid;
Valid;
none;
none;
submit data
743.405 C21 H28 N7 O17 P3 c1cc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2Q46 1.8 Å NON-ENZYME: OTHER ENSEMBLE REFINEMENT OF THE PROTEIN CRYSTAL STRUCTURE OF GENE FROM ARABIDOPSIS THALIANA AT5G02240 ARABIDOPSIS THALIANA ENSEMBLE REFINEMENT REFINEMENT METHODOLOGY DEVELOPMENT AT5NADP STRUCTURAL GENOMICS PROTEIN STRUCTURE INITIATIVE PSFOR EUKARYOTIC STRUCTURAL GENOMICS CESG UNKNOWN FUNCTION
Ref.: ENSEMBLE REFINEMENT OF PROTEIN CRYSTAL STRUCTURES: VALIDATION AND APPLICATION. STRUCTURE V. 15 1040 2007
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 2Q46 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 1XQ6 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 1YBM - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
4 2Q4B - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 2Q46 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 1XQ6 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 1YBM - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
4 2Q4B - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 2Q46 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 1XQ6 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 1YBM - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
4 2Q4B - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAP; Similar ligands found: 123
No: Ligand ECFP6 Tc MDL keys Tc
1 NAP 1 1
2 NA0 0.881356 0.986301
3 TAP 0.872881 0.934211
4 NDO 0.840336 0.972603
5 NAD 0.811966 0.986111
6 N01 0.733871 0.958904
7 A3D 0.712 0.972603
8 NBP 0.707692 0.935065
9 NHD 0.68254 0.958904
10 NJP 0.661417 0.972973
11 NFD 0.658915 0.934211
12 NXX 0.619048 0.959459
13 DND 0.619048 0.959459
14 AMP NAD 0.606061 0.958904
15 ZID 0.605839 0.972603
16 NAQ 0.59854 0.922078
17 ATR 0.59292 0.917808
18 NAE 0.591241 0.946667
19 NDE 0.58042 0.986301
20 A22 0.571429 0.958904
21 NAJ 0.567164 0.986111
22 A2R 0.563025 0.932432
23 NDC 0.561644 0.922078
24 NA7 0.552846 0.907895
25 ODP 0.551471 0.935065
26 A2P 0.539823 0.930556
27 8ID 0.537313 0.910256
28 NPW 0.525547 0.8875
29 NZQ 0.521739 0.910256
30 CNA 0.521739 0.959459
31 NDP 0.514493 0.922078
32 PO4 PO4 A A A A PO4 0.503937 0.930556
33 1DG 0.503401 0.922078
34 DG1 0.503401 0.922078
35 TXP 0.5 0.922078
36 NMN AMP PO4 0.492958 0.921053
37 XNP 0.492958 0.875
38 25L 0.492308 0.958904
39 25A 0.492063 0.972222
40 NMN 0.486726 0.888889
41 NGD 0.485714 0.935065
42 9JJ 0.481707 0.8875
43 2AM 0.477876 0.891892
44 ADP 0.458333 0.945205
45 PAP 0.451613 0.931507
46 A2D 0.445378 0.945205
47 AN2 0.442623 0.932432
48 7L1 0.441558 0.777778
49 ADP PO3 0.44 0.944444
50 SAP 0.44 0.896104
51 AGS 0.44 0.896104
52 M33 0.439024 0.906667
53 AR6 AR6 0.438849 0.945205
54 BA3 0.438017 0.945205
55 OAD 0.43609 0.92
56 ADP BMA 0.43609 0.92
57 DQV 0.435714 0.958904
58 HEJ 0.435484 0.945205
59 ATP 0.435484 0.945205
60 OOB 0.435115 0.958904
61 B4P 0.434426 0.945205
62 AP5 0.434426 0.945205
63 GAP 0.433071 0.92
64 0WD 0.432432 0.922078
65 2A5 0.432 0.87013
66 5FA 0.432 0.945205
67 AQP 0.432 0.945205
68 AT4 0.430894 0.907895
69 00A 0.428571 0.909091
70 DAL AMP 0.427481 0.932432
71 CA0 0.427419 0.92
72 ADP ALF 0.426357 0.871795
73 ALF ADP 0.426357 0.871795
74 9X8 0.425373 0.871795
75 ACP 0.424 0.92
76 NAJ PZO 0.423841 0.897436
77 9SN 0.423358 0.897436
78 ADP VO4 0.423077 0.932432
79 VO4 ADP 0.423077 0.932432
80 WAQ 0.422222 0.884615
81 V3L 0.421875 0.945205
82 ACQ 0.421875 0.92
83 ADQ 0.421053 0.92
84 AR6 0.420635 0.918919
85 APR 0.420635 0.918919
86 ATP A A A 0.42029 0.958333
87 CO7 0.419753 0.786517
88 3OD 0.419118 0.92
89 1ZZ 0.419118 0.841463
90 DLL 0.41791 0.958904
91 AD9 0.417323 0.92
92 NAX 0.416667 0.875
93 OVE 0.416667 0.857143
94 MYR AMP 0.416058 0.841463
95 AV2 0.415385 0.868421
96 A3P 0.414634 0.944444
97 NNR 0.414414 0.72973
98 OMR 0.413793 0.831325
99 6YZ 0.412214 0.92
100 ANP 0.410853 0.92
101 A1R 0.410448 0.860759
102 ABM 0.409836 0.893333
103 A 0.408333 0.944444
104 AMP 0.408333 0.944444
105 SON 0.408 0.933333
106 PPS 0.407692 0.829268
107 5AL 0.407692 0.932432
108 NAI 0.406897 0.909091
109 7D3 0.406504 0.857143
110 ADX 0.404762 0.829268
111 ATF 0.40458 0.907895
112 3UK 0.404412 0.945946
113 TYR AMP 0.404255 0.921053
114 AMP DBH 0.404255 0.894737
115 139 0.402685 0.875
116 50T 0.401575 0.906667
117 SRP 0.401515 0.907895
118 A A 0.40146 0.972222
119 B5V 0.40146 0.933333
120 A3R 0.4 0.860759
121 3AM 0.4 0.90411
122 B5M 0.4 0.921053
123 FA5 0.4 0.933333
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2Q46; Ligand: NAP; Similar sites found with APoc: 935
This union binding pocket(no: 1) in the query (biounit: 2q46.bio2) has 30 residues
No: Leader PDB Ligand Sequence Similarity
1 2BOS GLA GAL None
2 4XUC SAM None
3 4XUC 43G None
4 3TN7 NJP 1.16732
5 2AG5 NAD 1.21951
6 5L53 NAP 1.58103
7 4Q9N NAI 1.58103
8 4N49 SAM 1.58103
9 5YU3 NAD 1.58103
10 5YU3 PRO 1.58103
11 1H2B NAJ 1.58103
12 1J5P NAD 1.58103
13 2AHR NAP 1.58103
14 5ULP KB1 1.58103
15 2FWP CIT 1.63934
16 1RKX NAD 1.97628
17 3VZS CAA 1.97628
18 4OHU NAD 1.97628
19 4OHU 2TK 1.97628
20 1WMA NDP 1.97628
21 1WMA AB3 1.97628
22 3VZS NAP 1.97628
23 1E1M FAD 1.97628
24 1E1M NAP 1.97628
25 9LDB NAD 1.97628
26 6A3J SOE 1.97628
27 4TXI FAD 1.97628
28 9LDT NAD 1.97628
29 1J49 NAD 1.97628
30 3LAD FAD 1.97628
31 2IVD FAD 1.97628
32 6A3J NAI 1.97628
33 2UXR ICT 1.97628
34 2VDV SAM 2.03252
35 3CBG SAH 2.15517
36 1JAY NAP 2.35849
37 1ZEM NAD 2.37154
38 5YSS NAD 2.37154
39 1VL8 NAP 2.37154
40 6CI9 NAP 2.37154
41 1FK8 NAD 2.37154
42 1UWK NAD 2.37154
43 1UWK URO 2.37154
44 6D6Y SAH 2.37154
45 1ZGA SAH 2.37154
46 1U1I NAD 2.37154
47 2D2I NAP 2.37154
48 1X14 NAD 2.37154
49 5U5G NAP 2.37154
50 5H81 NAP 2.37154
51 1X7D ORN 2.37154
52 1X7D NAD 2.37154
53 4ZGS NAD 2.37154
54 2NAD NAD 2.37154
55 1RM4 NDP 2.37154
56 2CVZ NDP 2.37154
57 1WP4 NDP 2.37154
58 2Y6Q I7T 2.37154
59 2Y6Q FAD 2.37154
60 5KOK SAH 2.37154
61 6C5B SAH 2.37154
62 6FDF SAH 2.37154
63 5TWB FAD 2.37154
64 3DMH SAM 2.37154
65 1SOW NAD 2.37154
66 2P41 SAH 2.37154
67 1Q9I TEO 2.37154
68 1Q9I FAD 2.37154
69 3DXY SAM 2.37154
70 3AB1 FAD 2.37154
71 3QVP FAD 2.37154
72 3CTY FAD 2.37154
73 1NAA 6FA 2.37154
74 1NAA ABL 2.37154
75 1JQ3 AAT 2.37154
76 3TLJ SAH 2.37154
77 4UP3 NDP 2.37154
78 4YCA NDP 2.37154
79 5H4S RAM 2.37154
80 5YF1 SFG 2.37154
81 3EVG SAH 2.37154
82 1O0S NAI 2.37154
83 1RJD SAM 2.37154
84 1RSG FAD 2.37154
85 1YY5 FAD 2.37154
86 1XTP SAI 2.37154
87 1ZK4 NAP 2.39044
88 1ZK4 AC0 2.39044
89 1JJV ATP 2.42718
90 4RSL FAD 2.47191
91 1R37 NAD 2.59366
92 3SJU NDP 2.7668
93 1JA9 NDP 2.7668
94 1SNY NAP 2.7668
95 1QG6 NAD 2.7668
96 1QG6 TCL 2.7668
97 3WMX NAD 2.7668
98 4O1M NAD 2.7668
99 4XQC 13D 2.7668
100 4XQC NAD 2.7668
101 1RM0 D6P 2.7668
102 1RM0 NAI 2.7668
103 2GCG NDP 2.7668
104 2F1K NAP 2.7668
105 4ZVV GN0 2.7668
106 4KOA NDP 2.7668
107 4LWP SAH 2.7668
108 4ZVV NAD 2.7668
109 2DFV NAD 2.7668
110 1SC6 NAD 2.7668
111 1LLU NAD 2.7668
112 5J60 FAD 2.7668
113 1HYH NAD 2.7668
114 5UAV NDP 2.7668
115 6GKV SAH 2.7668
116 5JWC FAD 2.7668
117 1GQ2 NAP 2.7668
118 5UAV TFB 2.7668
119 2VTD LKM 2.7668
120 2GLX NDP 2.7668
121 2GMH FAD 2.7668
122 1GVF PGH 2.7668
123 3NTD FAD 2.7668
124 1Z82 NDP 2.7668
125 2OBF F83 2.7668
126 2OBF SAH 2.7668
127 1DL2 NAG NAG BMA 2.7668
128 4AGS GSH 2.7668
129 5WUW NAP 2.78746
130 2VT3 ATP 2.7907
131 5XWV NDP 2.82258
132 5XWV 8H6 2.82258
133 1NNU NAD 3.05677
134 1NNU TCT 3.05677
135 5ZW3 SAH 3.11111
136 2AE2 NAP 3.16206
137 2AE2 PTO 3.16206
138 5FEU NAP 3.16206
139 2GDZ NAD 3.16206
140 5FFF 5XC 3.16206
141 1BXK NAD 3.16206
142 5FFF NAP 3.16206
143 4O0L NDP 3.16206
144 1NFQ NAI 3.16206
145 5OJI NAP 3.16206
146 5OJI ISN 3.16206
147 1ZBQ NAD 3.16206
148 1HYE NAP 3.16206
149 1UXG NAD 3.16206
150 1UXG FUM 3.16206
151 5UR0 NAD 3.16206
152 1F8G NAD 3.16206
153 2EG5 SAH 3.16206
154 4R5M NAP 3.16206
155 1BW9 NAD 3.16206
156 1NVM NAD 3.16206
157 1CF2 NAP 3.16206
158 5A04 BGC 3.16206
159 5A04 NDP 3.16206
160 2WPF FAD 3.16206
161 1PN0 FAD 3.16206
162 1EBF NAD 3.16206
163 2WPF WPF 3.16206
164 3OND ADN 3.16206
165 3OND NAD 3.16206
166 1FEC FAD 3.16206
167 1PN0 IPH 3.16206
168 3ITJ CIT 3.16206
169 4DCM SAM 3.16206
170 2GKS ADP 3.16206
171 4C3Y FAD 3.16206
172 2EFJ SAH 3.16206
173 5MQ6 NDP 3.16206
174 4C3Y ANB 3.16206
175 2C7G FAD 3.16206
176 2C7G ODP 3.16206
177 4RPL FAD 3.16206
178 4RPL 3UC 3.16206
179 3AYI FAD 3.16206
180 3AYI HCI 3.16206
181 1TDF NAP 3.16206
182 4Y9D NAI 3.16206
183 4KRG SAH 3.16206
184 2WA2 SAM 3.16206
185 1N9G NAP 3.16206
186 3A4T SFG 3.16206
187 2NPX NAD 3.16206
188 2NPX FAD 3.16206
189 3LCV SAM 3.16206
190 2JB2 FAD 3.16206
191 1SAY PYR 3.16206
192 1TDF FAD 3.16206
193 2A14 SAH 3.16206
194 2JB2 PHE 3.16206
195 4UCI SAM 3.16206
196 1BXG NAD 3.16206
197 5DWQ SFG 3.16206
198 4R5M 4NO 3.16206
199 1E3I CXF 3.16206
200 1C1X NAD 3.16206
201 3OZ2 FAD 3.16206
202 5FUB SAH 3.16206
203 5YJF SAH 3.16901
204 5YJF 8WO 3.16901
205 3HAD NAD 3.24675
206 5Z2L NDP 3.26531
207 4NBT NAD 3.33333
208 5YEC ATP 3.36134
209 1ORR NAD 3.55731
210 2Q2V NAD 3.55731
211 5B4T 3HR 3.55731
212 5B4T NAD 3.55731
213 1IY8 NAD 3.55731
214 2BGM NAJ 3.55731
215 3A28 NAD 3.55731
216 4D42 NAP 3.55731
217 4D42 W0I 3.55731
218 1GEG NAD 3.55731
219 5CG1 NAD BBN 3.55731
220 1GZ6 NAI 3.55731
221 1E5Q NDP 3.55731
222 1PJS NAD 3.55731
223 5N6C NAD 3.55731
224 5T9F TYR 3.55731
225 3L4S NAD 3.55731
226 5T9F NAP 3.55731
227 1YB5 NAP 3.55731
228 3L4S 3PG 3.55731
229 5T9E NAP 3.55731
230 3A06 FOM 3.55731
231 3A06 NDP 3.55731
232 6C4T NA7 3.55731
233 5UAO FAD 3.55731
234 1LDN NAD 3.55731
235 5M67 NAD 3.55731
236 5JY6 NAD 3.55731
237 5HSA FAS 3.55731
238 5M67 ADE 3.55731
239 5M67 3D1 3.55731
240 3KB6 NAD 3.55731
241 1PL6 NAD 3.55731
242 1MUU NAD 3.55731
243 1DRV A3D 3.55731
244 3TWO NDP 3.55731
245 4NEC SAH 3.55731
246 1YQD NAP 3.55731
247 1LTH NAD 3.55731
248 5TUF TDC 3.55731
249 5TUF FAD 3.55731
250 3EF0 ALF 3.55731
251 1PL6 572 3.55731
252 1DLJ UGA 3.55731
253 1DLJ NAI 3.55731
254 1MV8 NAD 3.55731
255 2P3V SRT 3.55731
256 2VCN ISZ 3.55731
257 2JJQ SAH 3.55731
258 1F8F NAD 3.55731
259 4DSG FAD 3.55731
260 4DSG UDP 3.55731
261 5JJR SAH 3.55731
262 6CEP OXM 3.55731
263 6CEP NAD 3.55731
264 5WGR FAD 3.55731
265 2JHF NAD 3.55731
266 1P7T PYR 3.55731
267 4B63 FAD 3.55731
268 4B63 ORN 3.55731
269 4B63 NAP 3.55731
270 3WD6 GSH 3.55731
271 1P0F NAP 3.55731
272 3ORF NAD 3.58566
273 5EIN NAP 3.7037
274 3BXO SAM 3.76569
275 3LCC SAH 3.82979
276 6DWI HD4 3.86266
277 1EJ0 SAM 3.88889
278 1X1T NAD 3.95257
279 2YY7 NAD 3.95257
280 3V1U NAD 3.95257
281 5EJ2 NAD 3.95257
282 5I7S NAD 3.95257
283 5I7S E9P 3.95257
284 1P77 ATR 3.95257
285 3CMC NAD 3.95257
286 3ABI NAD 3.95257
287 4E5N NAD 3.95257
288 1EZ4 NAD 3.95257
289 3SSO SAH 3.95257
290 1X87 NAD 3.95257
291 4J36 FAD 3.95257
292 4J36 1HR 3.95257
293 3I53 SAH 3.95257
294 1T26 GBD 3.95257
295 1T26 NAI 3.95257
296 1GR0 NAD 3.95257
297 4II2 ATP 3.95257
298 1SQF SAM 3.95257
299 5ERG SAM 3.95257
300 5BVA FAD 3.95257
301 5ME4 HP4 3.95257
302 4YNU FAD 3.95257
303 4YNU LGC 3.95257
304 5Z20 NAI 3.95257
305 1WPQ NAD 3.95257
306 5JGL SAM 3.95257
307 6AA8 NAD 3.95257
308 2A92 NAI 3.95257
309 5O9F 9ON 3.95257
310 5O9F NAD 3.95257
311 5AYV NAP 3.95257
312 1UP7 NAD 3.95257
313 3WLE NAD 3.95257
314 5YJI 8WO 3.95257
315 5YJI SAH 3.95257
316 5AYV KPL 3.95257
317 2EB5 OXL 3.95257
318 1GUZ NAD 3.95257
319 2IBN I1N 4
320 4URF NAD 4.03226
321 5MGZ SAH 4.23729
322 1E6W NAD 4.34783
323 1E3W NAD 4.34783
324 4NBW NAD 4.34783
325 5MSO NAP 4.34783
326 5G4L NDP 4.34783
327 1H9A NAP 4.34783
328 3O7W SAM 4.34783
329 6BII NAP 4.34783
330 5MIT FAD 4.34783
331 5MIT NAP 4.34783
332 2HJR APR 4.34783
333 3LST SAH 4.34783
334 1KYZ SAH 4.34783
335 6ER9 FAD 4.34783
336 1WDK NAD 4.34783
337 5J5Z FAD 4.34783
338 5GSN NAP 4.34783
339 5GSN FAD 4.34783
340 6ER9 NAP 4.34783
341 1GPE FAD 4.34783
342 5GSN MMZ 4.34783
343 1O6Z NAD 4.34783
344 4CNK FAD 4.34783
345 2DKH FAD 4.34783
346 1ZK7 FAD 4.34783
347 2DM6 NAP 4.34783
348 5WP4 SAH 4.34783
349 4Z24 FAD 4.34783
350 5U5N NAD 4.34783
351 2XZ9 PYR 4.34783
352 4JDR FAD 4.34783
353 2DKH 3HB 4.34783
354 3S5W FAD 4.34783
355 4NBU NAI 4.4
356 2D2F ADP 4.4
357 3GEG NAD 4.45344
358 5EES NAP 4.45344
359 4EA7 COA 4.54545
360 4EA7 JB2 4.54545
361 4BQS ADP 4.54545
362 4ZRN UPG 4.74308
363 4ZRN NAD 4.74308
364 3KO8 NAD 4.74308
365 1KEW NAD 4.74308
366 1KEW TYD 4.74308
367 3U4C NDP 4.74308
368 5L4S 6KX 4.74308
369 5L4S NAP 4.74308
370 4YAG NAI 4.74308
371 3BAZ NAP 4.74308
372 2DBZ NAP 4.74308
373 1CER NAD 4.74308
374 1P31 EPU 4.74308
375 5X9D 80F 4.74308
376 3LKZ SFG 4.74308
377 1QO8 FAD 4.74308
378 1RYD NDP 4.74308
379 1H6C NDP 4.74308
380 2HQM FAD 4.74308
381 4MDH NAD 4.74308
382 1C0I BE2 4.74308
383 1C0I FAD 4.74308
384 2QA1 FAD 4.74308
385 5F8F SFG 4.74308
386 2ZIF SAM 4.74308
387 2Q7V FAD 4.74308
388 1Y8Q ATP 4.74308
389 1H6C SIN 4.74308
390 3ULK NDP 4.74308
391 4A6D SAM 4.74308
392 2RGJ FAD 4.74308
393 5MDH NAD 4.74308
394 3G5S FAD 4.74308
395 6C4N NAP 4.74308
396 5X62 SAH 4.74308
397 5TS5 FAD 4.74308
398 4PLT NAI 4.83384
399 4PLT OXM 4.83384
400 6BWL NAD 5.13834
401 5GT9 NAP 5.13834
402 1OAA OAA 5.13834
403 2PZM NAD 5.13834
404 2PZM UDP 5.13834
405 1N5D NDP 5.13834
406 1Q0H NDP 5.13834
407 1Q0H FOM 5.13834
408 4RDH AMP 5.13834
409 1V6A TRE 5.13834
410 4D79 ATP 5.13834
411 1GTE FAD 5.13834
412 3QV1 NAD 5.13834
413 3C1O NAP 5.13834
414 1K3T BRZ 5.13834
415 4RDI ATP 5.13834
416 5Y77 FAD 5.13834
417 2CVQ NDP 5.13834
418 3UCL NAP 5.13834
419 4YAC NAI 5.13834
420 3UCL FAD 5.13834
421 3UCL CYH 5.13834
422 5BRT CH9 5.13834
423 5BRT FAD 5.13834
424 1KEV NDP 5.13834
425 5DNK SAH 5.13834
426 5HXI 5HN 5.13834
427 5HXI FAD 5.13834
428 3GMB FAD 5.13834
429 1PS9 FAD 5.13834
430 1ZH8 NAP 5.13834
431 2FZW NAD 5.13834
432 3WBF NAP 5.13834
433 2YYY NAP 5.13834
434 3WBF API 5.13834
435 6FP4 E1T 5.13834
436 4W6Z 8ID 5.13834
437 2PT9 2MH 5.13834
438 3SJ7 NDP 5.15873
439 1HDR NAD 5.32787
440 3K1X DBX 5.38462
441 4WH9 3M8 5.46448
442 1E6E FAD 5.46875
443 1JG3 ADN 5.53191
444 1MXH DHF 5.5336
445 1MXH NAP 5.5336
446 5GWT NAD 5.5336
447 5GWT SIN 5.5336
448 3H4V DVP 5.5336
449 3H4V NAP 5.5336
450 1XHL NDP 5.5336
451 3O26 NDP 5.5336
452 1WVG APR 5.5336
453 2IZ1 ATR 5.5336
454 5XNC MTA 5.5336
455 5A1T NAI 5.5336
456 1FP2 SAH 5.5336
457 5A1T OXM 5.5336
458 4KIB SAH 5.5336
459 5JE8 NAD 5.5336
460 4Z0H NAD 5.5336
461 3SQP FAD 5.5336
462 5KKA 6V0 5.5336
463 3T7S SAM 5.5336
464 4GKV NAD 5.5336
465 6GAS FAD 5.5336
466 4U8P UDP 5.5336
467 4U8P FDA 5.5336
468 3FUU ADN 5.5336
469 3UBM COA 5.5336
470 1A99 PUT 5.5336
471 3LZW FAD 5.5336
472 3LZW NAP 5.5336
473 4KCF FMN 5.5336
474 5LOG SAH 5.5794
475 5N2I NAP 5.60345
476 1YQZ FAD 5.70776
477 5V6F MAN BMA MAN 5.7971
478 1UI0 URA 5.85366
479 1NVT NAP 5.92335
480 1AE1 NAP 5.92885
481 5MLR NAP 5.92885
482 5MLR GRQ 5.92885
483 2V6G NAP 5.92885
484 3AY6 NAI 5.92885
485 3AY6 BGC 5.92885
486 1EQ2 NAP 5.92885
487 3MCT SAH 5.92885
488 5MPT SAH 5.92885
489 3MAG SAH 5.92885
490 5W7M SAH 5.92885
491 2WET FAD 5.92885
492 1BZL FAD 5.92885
493 1BZL GCG 5.92885
494 5BW4 SAM 5.92885
495 4E13 NAD 5.92885
496 5X68 FAD 5.92885
497 3X0D SAH 5.92885
498 3B2Q AES 5.92885
499 2Q0L NAP 5.92885
500 1B74 DGN 5.92885
501 4K5S PM0 5.92885
502 4K5S FAD 5.92885
503 1YKF NAP 5.92885
504 5JCA FAD 5.92885
505 2O4C NAD 5.92885
506 5JCA NDP 5.92885
507 2IID PHE 5.92885
508 2IID FAD 5.92885
509 2FN8 RIP 5.92885
510 1XCL SAH 5.95745
511 2DT5 NAD 6.16114
512 6DNT NAD 6.32411
513 4KWI 1TJ 6.32411
514 1U7T TDT 6.32411
515 1GEE NAD 6.32411
516 4KWI NAP 6.32411
517 5O42 9JW 6.32411
518 5O42 BGC 6.32411
519 5O42 NAD 6.32411
520 1Z6Z NAP 6.32411
521 1YXM ADE 6.32411
522 4J7U YTZ 6.32411
523 4J7U NAP 6.32411
524 2B4Q NAP 6.32411
525 1VL0 NAI 6.32411
526 1U7T NAD 6.32411
527 1BDB NAD 6.32411
528 6F9Q NAD 6.32411
529 2PD4 NAD 6.32411
530 2PD4 DCN 6.32411
531 2X6T NAP 6.32411
532 5OJL TXP 6.32411
533 1GAD NAD 6.32411
534 3B1F NAD 6.32411
535 2VYN NAD 6.32411
536 4M1U A2G MBG 6.32411
537 2I3G NAP 6.32411
538 1H82 GZZ 6.32411
539 4XYB NDP 6.32411
540 3GDN HBX 6.32411
541 3GDN FAD 6.32411
542 1H82 FAD 6.32411
543 1YJQ NAP 6.32411
544 4M73 M72 6.32411
545 4M73 SAH 6.32411
546 5E72 SAM 6.32411
547 2NU8 COA 6.4433
548 4XZ3 COA 6.52174
549 5U75 SIA GAL NDG FUC 6.54762
550 2XYQ SAH 6.55738
551 3HB5 NAP 6.71937
552 4OSP NAP 6.71937
553 1A27 NAP 6.71937
554 5JAQ NAI 6.71937
555 2PK3 A2R 6.71937
556 2CDU ADP 6.71937
557 3H9E NAD 6.71937
558 2B4R NAD 6.71937
559 3NJ4 AFX 6.71937
560 3NJ4 NAD 6.71937
561 3UOY FAD 6.71937
562 3UOY NAP 6.71937
563 2B4R AES 6.71937
564 4D04 NAP 6.71937
565 4D04 FAD 6.71937
566 2E5V FAD 6.71937
567 1YKJ PHB 6.71937
568 1YKJ FAD 6.71937
569 4PLG NAI 6.71937
570 4PLG OXM 6.71937
571 5K0A FAD 6.71937
572 1PZG A3D 6.71937
573 4CJN QNZ 6.71937
574 6C4M NAP 6.96203
575 1P1C SAH 7.03518
576 1Z45 NAD 7.11462
577 2HK9 ATR 7.11462
578 3CIF G3H 7.11462
579 3CIF NAD 7.11462
580 5OCM NAP 7.11462
581 1QZZ SAM 7.11462
582 5OC1 FAD 7.11462
583 2HK9 NAP 7.11462
584 1XDS SAM 7.11462
585 5MW4 5JU 7.11462
586 1KC7 PPR 7.11462
587 1HKU NAD 7.11462
588 5NA1 FAD 7.11462
589 4M37 SAH 7.11462
590 1N1G BCP 7.11462
591 2AG8 NAP 7.11462
592 1I8T FAD 7.11462
593 5Y8L HUI 7.11462
594 5Y8L NAD 7.11462
595 2Z8L NAG FUC SIA GAL 7.21154
596 1V35 NAI 7.29483
597 1JNR FAD 7.33333
598 1C3V NDP 7.34694
599 3QWI CUE 7.50988
600 3QWI NAP 7.50988
601 1XKQ NDP 7.50988
602 4FC7 NAP 7.50988
603 4FC7 COA 7.50988
604 4RF2 NAP 7.50988
605 3B1J NAD 7.50988
606 1Y1P NMN AMP PO4 7.50988
607 2B5W NAP 7.50988
608 4AT0 FAD 7.50988
609 3B20 NAD 7.50988
610 2ZXI FAD 7.50988
611 3KLJ FAD 7.50988
612 2Z3Y F2N 7.50988
613 3CGB FAD 7.50988
614 5EOW FAD 7.65432
615 1MID LAP 7.69231
616 3HVJ 705 7.69231
617 2F5Z FAD 7.8125
618 1EJ4 M7G 7.89474
619 2ZJ1 ARJ 7.90514
620 2ZJ1 NAD 7.90514
621 3GGO NAI 7.90514
622 3GGO ENO 7.90514
623 4B4U NAP 7.90514
624 4BJZ P3A 7.90514
625 4BJZ FAD 7.90514
626 1V8B NAD 7.90514
627 4L8V NAP 7.90514
628 3PT9 SAH 7.90514
629 2G5C NAD 7.90514
630 6F3N ADN 7.90514
631 6F3M NAD 7.90514
632 6F3N NAD 7.90514
633 5Z2F NAP 7.90514
634 2OOR NAD 8.04598
635 1XG5 NAP 8.3004
636 1GY8 NAD 8.3004
637 4ZA2 NAD 8.3004
638 1EK6 NAI 8.3004
639 5Z75 NAD 8.3004
640 1EK6 UPG 8.3004
641 2CUL FAD 8.3004
642 2J5V RGP 8.3004
643 2J5V PCA 8.3004
644 4A0S NAP 8.3004
645 4HA6 FAD 8.3004
646 4YSX FAD 8.3004
647 5TUK FAD 8.3004
648 2HMT NAI 8.33333
649 4YMH SAH 8.33333
650 2DC1 NAD 8.47458
651 4K26 NDP 8.69565
652 4K26 SFF 8.69565
653 2FR1 NDP 8.69565
654 5K4W NAI 8.69565
655 5K4W THR 8.69565
656 5CAE SIN 8.69565
657 5MZI FYK 8.69565
658 5MZI FAD 8.69565
659 5CAE COA 8.69565
660 1U8X NAD 8.69565
661 1RJW ETF 8.69565
662 2EV9 NAP 8.69565
663 2EV9 SKM 8.69565
664 4X60 3XV 8.69565
665 4X60 SFG 8.69565
666 3EGI ADP 8.73786
667 2VHW NAI 8.75332
668 2EWM NAD 8.83534
669 1O5I NAD 8.83534
670 1XHC FAD 8.99183
671 3LU1 NAD 9.06593
672 2Q1S NAI 9.09091
673 4PIV NDP 9.09091
674 2WYV NAD 9.09091
675 3V1Y NAD 9.09091
676 5LD5 NAD 9.09091
677 5KOX RFP 9.09091
678 5KOX FAD 9.09091
679 5GZ6 NDP 9.09091
680 4KRI SAH 9.09091
681 4B7X NAP 9.09091
682 4RQU NAD 9.09091
683 6F97 FAD 9.09091
684 5GZ6 7C3 9.09091
685 3RJ5 NAD 9.48617
686 4FN4 NAD 9.48617
687 2C5A GDC 9.48617
688 2C5A NAD 9.48617
689 5ZEC NAP 9.48617
690 4EUE NAI 9.48617
691 1HDG NAD 9.48617
692 3GU3 SAH 9.48617
693 4J4H NAI 9.48617
694 4J4H 1J1 9.48617
695 4JK3 NAD 9.48617
696 3E1T FAD 9.48617
697 1MO9 FAD 9.48617
698 1MO9 KPC 9.48617
699 5NMX NAP 9.48617
700 3NKS FAD 9.48617
701 5NMX FAD 9.48617
702 1OMO NAD 9.48617
703 5THQ NDP 9.88142
704 6EL3 NAP 9.88142
705 5F5N NAD 9.88142
706 3OJF NDP 9.88142
707 3OJF IMJ 9.88142
708 5WP5 SAH 9.88142
709 3GFB NAD 9.88142
710 1ZQ9 SAM 9.88142
711 4DPL NAP 9.88142
712 3TKY SAH 9.88142
713 4YRY FAD 9.88142
714 1B8U OAA 9.88142
715 1GV0 NAD 9.88142
716 1REO FAD 9.88142
717 4YRY NAD 9.88142
718 1COY FAD 9.88142
719 1B8U NAD 9.88142
720 1COY AND 9.88142
721 1LSS NAD 10
722 4ITU 1HS 10.0372
723 4ITU NAI 10.0372
724 5ZZ6 ADP 10.0962
725 5ZZ6 NAD 10.0962
726 1W73 NAP 10.2767
727 1W8D NAP 10.2767
728 1W6U NAP 10.2767
729 5EPO NAP 10.2767
730 5ZYN FAD 10.2767
731 2GSD NAD 10.2767
732 5A7Y SAH 10.2767
733 1J0X NAD 10.2767
734 5XVH NAP 10.2767
735 4AP3 NAP 10.2767
736 4AP3 FAD 10.2767
737 1KNR FAD 10.2767
738 1KYQ NAD 10.2767
739 3DUW SAH 10.3139
740 2DTX BMA 10.6719
741 1N7G NDP 10.6719
742 1N7G GDR 10.6719
743 4KP7 1UQ 10.6719
744 4KP7 NAP 10.6719
745 3WQQ NDP 10.6719
746 3WQQ IB3 10.6719
747 1DSS NAD 10.6719
748 4XYM COA 10.6719
749 2YVF NAD 10.6719
750 2YVF FAD 10.6719
751 4JBI NDP 10.6719
752 2YVJ NAI 10.6719
753 1UAY ADN 10.7438
754 5ZI2 NAD 11.0145
755 5ZI2 ADP 11.0145
756 1XSE NDP 11.0672
757 2DKN NAI 11.0672
758 3OIG NAD 11.0672
759 2PV7 NAD 11.0672
760 4BVA NDP 11.0672
761 4BVA T3 11.0672
762 1OBB NAD 11.0672
763 4QTU SAM 11.1111
764 1A0J BEN 11.2108
765 4CQM NAP 11.4625
766 5Y1G AKB 11.4625
767 5Y1G NAD 11.4625
768 1D7O NAD 11.4625
769 1D7O TCL 11.4625
770 1UDB UFG 11.4625
771 1UDB NAD 11.4625
772 2RAB FAD 11.4625
773 2RAB NAD 11.4625
774 5X20 NAD 11.4625
775 4X9M FAD 11.4625
776 5OVK NDP 11.8577
777 5OVL NAP 11.8577
778 3O03 NAP 11.8577
779 5E9W SAH 11.8577
780 5AOV NAP 11.8577
781 4XB2 HSE 11.8577
782 4XB2 NDP 11.8577
783 5E8J SAH 11.8577
784 3T31 DCQ 11.8577
785 3T31 FAD 11.8577
786 1GET NAP 11.8577
787 1GET FAD 11.8577
788 1NYT NAP 11.8577
789 1SKQ GDP 11.8577
790 1A5Z NAD 11.8577
791 1Q7B NAP 11.8852
792 3G89 SAM 12.0482
793 3RNM FAD 12.069
794 2C29 NAP 12.253
795 2C29 DQH 12.253
796 2IXB A2G 12.253
797 2IXB NAD 12.253
798 3AFN NAP 12.4031
799 2GZ3 NAP 12.6482
800 4M52 FAD 12.6482
801 5U8U FAD 12.6482
802 2CFC NAD 12.8
803 2JAP NDP 12.9555
804 1UZN NAP 12.9555
805 5CIC 51R 12.963
806 1SB8 UD2 13.0435
807 1SB8 NAD 13.0435
808 4J1Q NDP 13.0435
809 1VKO NAD 13.0435
810 5WQP NCA 13.2479
811 5WQP NAP 13.2479
812 5N5D SAM 13.2743
813 2JAH NDP 13.3603
814 1R6D NAD 13.4387
815 1R6D DAU 13.4387
816 5BSH PRO 13.4387
817 2BD0 NAP 13.5246
818 1VM6 NAD 13.5965
819 1G0N NDP 13.834
820 1G0N PHH 13.834
821 3RFV NAI 13.834
822 1RPN NDP 13.834
823 3RFV 15L 13.834
824 5NUF NAD 13.834
825 5L95 AMP 13.834
826 3H8V ATP 13.834
827 5NUE NAD 13.834
828 3CGD FAD 13.834
829 3CGD COA 13.834
830 3CGD NAD 13.834
831 2RH4 EMO 14.2292
832 2XVE FAD 14.2292
833 2XVF FAD 14.2292
834 4D3F NAP 14.2292
835 3LXD FAD 14.2292
836 3CH6 NAP 14.6245
837 3CH6 311 14.6245
838 3ZV6 NAD 14.6245
839 3ZV6 4HB 14.6245
840 3I6I NDP 14.6245
841 1FP1 SAH 14.6245
842 6A0S HSE 14.6245
843 6A0S NDP 14.6245
844 3RKR NAP 14.6245
845 4FZV SAM 14.6245
846 4NTD FAD 14.6245
847 1EDO NAP 14.7541
848 2ZAT NAP 15.0198
849 3NUG NAD 15.3846
850 4OM8 NAD 15.415
851 5HJM MTA 15.415
852 5T2U NAP 15.7258
853 1OC2 TDX 15.8103
854 1OC2 NAD 15.8103
855 1V59 NAD 15.8103
856 1V59 FAD 15.8103
857 1PR9 NAP 15.9836
858 3D3W NAP 15.9836
859 4OOE FOM 16.2055
860 4OOE NDP 16.2055
861 1YS4 NAP 16.2055
862 5Z21 NAI 16.2055
863 1O94 ADP 16.2055
864 1DJN ADP 16.2055
865 6F5Z SAH 16.3934
866 1H5Q NAP 16.6008
867 5DF1 NAP 17.3913
868 5DF1 58X 17.3913
869 2VUT NAD 17.3913
870 1TI7 NAP 17.3913
871 3VPH OXM 17.3913
872 3VPH NAD 17.3913
873 2AQJ TRP 17.7866
874 2AQJ FAD 17.7866
875 3MQ2 SAH 17.8899
876 4PVD NDP 18.1818
877 1LVL NAD 18.1818
878 4GQB 0XU 18.1818
879 1LVL FAD 18.1818
880 2QZZ EMF 18.239
881 2QZZ NAP 18.239
882 5FA5 MTA 20
883 5IN4 6CK 20.1581
884 5IN4 GDP 20.1581
885 5IN4 NAP 20.1581
886 5OOH 9ZZ 20.8738
887 5OOH NAP 20.8738
888 5DXA SFG 21.0526
889 5DX8 SFG 21.0526
890 4R1S NAP 21.3439
891 3ICS ADP 21.7391
892 3ICT ADP 21.7391
893 3ICS FAD 21.7391
894 3ICR FAD 21.7391
895 5O98 NAP 24.5059
896 4G5H UD7 25.2964
897 4G5H NAP 25.2964
898 5K6A NAP 25.6917
899 2VZ0 NAP 25.6917
900 2VZ0 D64 25.6917
901 5JDI NAP 25.6917
902 4CM9 NAP 25.6917
903 5JDC NAP 25.6917
904 3BMO NAP 25.6917
905 5JCJ NAP 25.6917
906 3BMQ NAP 25.6917
907 3BMN NAP 25.6917
908 3JQA NAP 25.6917
909 3JQ7 NAP 25.6917
910 3JQF NAP 25.6917
911 2WD7 NAP 25.6917
912 4CLR NAP 25.6917
913 4CM4 NAP 25.6917
914 3JQG NAP 25.6917
915 4CMI NAP 25.6917
916 4CME NAP 25.6917
917 3JQ9 NAP 25.6917
918 4CM8 NAP 25.6917
919 4CLO NAP 25.6917
920 3JQB NAP 25.6917
921 3JQ8 NAP 25.6917
922 4GLL NAD 26.4822
923 3A4V NAD 26.8775
924 3A4V PYR 26.8775
925 2WSB NAD 27.1654
926 1E7S NAP 27.2727
927 2Q1W NAD 28.0632
928 2BKA NDP 28.5124
929 3OID NDP 29.249
930 4TQG NDP 32.0158
931 2GN4 NDP 34.7826
932 2GN4 UD1 34.7826
933 5L4L NAP 36.7589
934 5L4L 7OX 36.7589
935 2JL1 NAP 36.7589
Pocket No.: 2; Query (leader) PDB : 2Q46; Ligand: NAP; Similar sites found with APoc: 45
This union binding pocket(no: 2) in the query (biounit: 2q46.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
1 2BOS GLA GAL GLC None
2 2NVK NAP 1.97628
3 1D1T NAD 2.37154
4 4WOH 4NP 2.40964
5 1F06 2NP 2.7668
6 1F06 NDP 2.7668
7 3ZNN FAD 2.7668
8 3ZNN 4WL 2.7668
9 1RL4 BL5 3.19149
10 1CDO NAD 3.55731
11 3WGT QSC 3.55731
12 2ZB4 5OP 3.55731
13 2ZB4 NAP 3.55731
14 3VPD CIT 3.55731
15 3WGT FAD 3.55731
16 1TB4 PEJ 3.95257
17 1LDM NAD 3.95257
18 1KOL NAD 4.0201
19 6CB2 OLC 4.34783
20 4MO2 FDA 4.34783
21 4MO2 FAD 4.34783
22 6GAR FAD 4.34783
23 4YUW S4M 4.74308
24 4YUW 4JU 4.74308
25 1U3U BNF 4.74308
26 1U3U NAD 4.74308
27 4YKG NAD 5.5336
28 2ATJ BHO 5.92885
29 4LHD GLY 6.32411
30 4MP8 NAD 6.71937
31 4MP8 MLI 6.71937
32 1VMK GUN 7.22022
33 3W6X HZP 7.86026
34 3NZ1 3NY 7.90514
35 4OGQ 7PH 8.82353
36 2HOX P1T 10.2767
37 2IOY RIP 10.2767
38 1O97 AMP 10.6719
39 1O97 FAD 10.6719
40 2QRK AMP 13.4387
41 1WK9 TSB 13.6986
42 3Q9T FAY 14.2292
43 3AI3 SOE 14.6245
44 1Q1R FAD 15.0198
45 3EW2 BTN 16.2963
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