Receptor
PDB id Resolution Class Description Source Keywords
2VBM 2 Å NON-ENZYME: BINDING TAILSPIKE PROTEIN OF BACTERIOPHAGE SF6 COMPLEXED WITH TETRAS ENTEROBACTERIA PHAGE SF6 VIRAL ADHESION PROTEIN VIRAL PROTEIN HYDROLASE TAILSPIKEENDORHAMNOSIDASE RIGHT-HANDED PARALLEL BETA-HELIX
Ref.: AN INTERSUBUNIT ACTIVE SITE BETWEEN SUPERCOILED PAR BETA HELICES IN THE TRIMERIC TAILSPIKE ENDORHAMNOSI SHIGELLA FLEXNERI PHAGE SF6. STRUCTURE V. 16 766 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MG A:875;
 Part of Protein;
 none;
 submit data
24.305 Mg [Mg+2...
MN A:876;
A:877;
 Part of Protein;
Part of Protein;
 none;
none;
 submit data
54.938 Mn [Mn+2...
PO4 A:872;
A:873;
 Invalid;
Invalid;
 none;
none;
 submit data
94.971 O4 P [O-]P...
RAM RAM NAG RAM B:1;
 Valid;
 none;
 submit data
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2VBM 2 Å NON-ENZYME: BINDING TAILSPIKE PROTEIN OF BACTERIOPHAGE SF6 COMPLEXED WITH TETRAS ENTEROBACTERIA PHAGE SF6 VIRAL ADHESION PROTEIN VIRAL PROTEIN HYDROLASE TAILSPIKEENDORHAMNOSIDASE RIGHT-HANDED PARALLEL BETA-HELIX
Ref.: AN INTERSUBUNIT ACTIVE SITE BETWEEN SUPERCOILED PAR BETA HELICES IN THE TRIMERIC TAILSPIKE ENDORHAMNOSI SHIGELLA FLEXNERI PHAGE SF6. STRUCTURE V. 16 766 2008
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 552 families.
1 2VBM - RAM RAM NAG RAM n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 426 families.
1 2VBM - RAM RAM NAG RAM n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 322 families.
1 2VBM - RAM RAM NAG RAM n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: RAM RAM NAG RAM; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: RAM RAM NAG RAM; Similar ligands found: 1
No: Ligand Similarity coefficient
1 RAM RAM NAG RAM 1.0000
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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