Receptor
PDB id Resolution Class Description Source Keywords
2VUT 2.3 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF NAD-BOUND NMRA-AREA ZINC FINGER COMPLEX EMERICELLA NIDULANS TRANSCRIPTION REGULATION PROTEIN-PROTEIN INTERACTIONS METAL-BINDING NITRATE ASSIMILATION ZINC-FINGER DNA-BINDING ZINC FINGERS TRANSCRIPTION ZINC AREA NMRA NUCLEUS ACTIVATOR GATA-TYPE
Ref.: STRUCTURAL ANALYSIS OF THE RECOGNITION OF THE NEGATIVE REGULATOR NMRA AND DNA BY THE ZINC FINGER FROM THE GATA-TYPE TRANSCRIPTION FACTOR AREA. J.MOL.BIOL. V. 381 373 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CL A:1354;
C:1354;
D:1353;
E:1353;
F:1353;
G:1354;
H:1353;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
submit data
35.453 Cl [Cl-]
GOL C:1353;
G:1353;
M:1712;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
NAD A:1353;
B:1353;
C:1355;
D:1354;
E:1354;
F:1354;
G:1355;
H:1354;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
663.425 C21 H27 N7 O14 P2 c1cc(...
ZN I:1713;
J:1713;
K:1712;
L:1713;
M:1713;
N:1713;
O:1712;
P:1713;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2VUT 2.3 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF NAD-BOUND NMRA-AREA ZINC FINGER COMPLEX EMERICELLA NIDULANS TRANSCRIPTION REGULATION PROTEIN-PROTEIN INTERACTIONS METAL-BINDING NITRATE ASSIMILATION ZINC-FINGER DNA-BINDING ZINC FINGERS TRANSCRIPTION ZINC AREA NMRA NUCLEUS ACTIVATOR GATA-TYPE
Ref.: STRUCTURAL ANALYSIS OF THE RECOGNITION OF THE NEGATIVE REGULATOR NMRA AND DNA BY THE ZINC FINGER FROM THE GATA-TYPE TRANSCRIPTION FACTOR AREA. J.MOL.BIOL. V. 381 373 2008
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 257 families.
1 2VUT - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 222 families.
1 2VUT - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 185 families.
1 2VUT - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAD; Similar ligands found: 220
No: Ligand ECFP6 Tc MDL keys Tc
1 A3D 0.872727 0.986111
2 NAD IBO 0.845455 0.933333
3 NHD 0.821429 0.972222
4 NAP 0.811966 0.986111
5 NAJ PYZ 0.803419 0.910256
6 NFD 0.791304 0.946667
7 NXX 0.765766 0.972603
8 DND 0.765766 0.972603
9 ZID 0.737705 0.986111
10 NAQ 0.729508 0.934211
11 NAE 0.721311 0.959459
12 NA0 0.712 0.972603
13 TAP 0.704 0.921053
14 AMP NAD 0.696 0.945946
15 NDE 0.689922 0.972603
16 NAJ 0.683333 0.972222
17 NDC 0.679389 0.934211
18 NDO 0.674603 0.958904
19 N01 0.656 0.972222
20 CNA 0.642276 0.972603
21 NBP 0.621212 0.922078
22 NAD BBN 0.609929 0.876543
23 8ID 0.609756 0.922078
24 NAD CJ3 0.601399 0.845238
25 ADP MG 0.579439 0.918919
26 A2D 0.576923 0.958333
27 ADP 0.575472 0.931507
28 NGD 0.574803 0.922078
29 BEF ADP 0.574074 0.894737
30 ADP BEF 0.574074 0.894737
31 BA3 0.566038 0.958333
32 NAD NDT 0.565789 0.755319
33 M33 0.564815 0.918919
34 ADP PO3 0.563636 0.957747
35 B4P 0.560748 0.958333
36 AP5 0.560748 0.958333
37 ATP MG 0.558559 0.918919
38 AN2 0.555556 0.918919
39 GAP 0.553571 0.932432
40 OOB 0.551724 0.972222
41 CA0 0.550459 0.932432
42 ATP 0.545455 0.931507
43 ACP 0.545455 0.906667
44 NAD TDB 0.544872 0.70297
45 ADP ALF 0.54386 0.883117
46 ALF ADP 0.54386 0.883117
47 5FA 0.540541 0.931507
48 AQP 0.540541 0.931507
49 APR 0.540541 0.931507
50 AR6 0.540541 0.931507
51 ANP MG 0.53913 0.907895
52 VO4 ADP 0.53913 0.945205
53 ADP VO4 0.53913 0.945205
54 AGS 0.535714 0.883117
55 SAP 0.535714 0.883117
56 AD9 0.535714 0.906667
57 WAQ 0.533333 0.896104
58 ABM 0.53271 0.905405
59 00A 0.529412 0.921053
60 DLL 0.529412 0.972222
61 ANP 0.526316 0.906667
62 NJP 0.526316 0.959459
63 ACQ 0.526316 0.906667
64 OAD 0.525 0.932432
65 AMP MG 0.523364 0.905405
66 ADX 0.522523 0.839506
67 5AL 0.521739 0.945205
68 A1R 0.521008 0.871795
69 9SN 0.520325 0.909091
70 AMP 0.518868 0.930556
71 A 0.518868 0.930556
72 50T 0.517857 0.893333
73 ATF 0.517241 0.894737
74 DAL AMP 0.516949 0.945205
75 3OD 0.516393 0.932432
76 1ZZ 0.516393 0.851852
77 SON 0.513514 0.92
78 PRX 0.513274 0.881579
79 SRP 0.512821 0.92
80 ADP BMA 0.512397 0.932432
81 3UK 0.512397 0.958904
82 MYR AMP 0.512195 0.851852
83 NAJ PZO 0.510949 0.909091
84 NMN 0.509434 0.875
85 AMP DBH 0.507937 0.906667
86 A22 0.504202 0.945205
87 FA5 0.504 0.945946
88 ATP A A A 0.504 0.971831
89 TYR AMP 0.5 0.945946
90 8QN 0.5 0.945205
91 NAX 0.496183 0.886076
92 PR8 0.495935 0.8625
93 PAJ 0.495868 0.873418
94 4AD 0.495868 0.933333
95 AMO 0.495868 0.92
96 ADQ 0.495868 0.932432
97 A12 0.495495 0.894737
98 AP2 0.495495 0.894737
99 ALF ADP 3PG 0.492424 0.873418
100 LA8 ALF 3PG 0.492424 0.873418
101 AHZ 0.492308 0.851852
102 YAP 0.492063 0.933333
103 FYA 0.491935 0.918919
104 AHX 0.491803 0.884615
105 4UU 0.488372 0.933333
106 5SV 0.487603 0.8375
107 TAT 0.487179 0.894737
108 APC 0.486957 0.894737
109 SRA 0.486239 0.881579
110 NAI 0.484848 0.921053
111 6V0 0.484848 0.909091
112 GTA 0.484615 0.898734
113 A A 0.483871 0.958333
114 LAD 0.483871 0.873418
115 AU1 0.482456 0.906667
116 TXE 0.481203 0.921053
117 AF3 ADP 3PG 0.481203 0.873418
118 OMR 0.481203 0.841463
119 LAQ 0.480916 0.851852
120 G3A 0.48062 0.909091
121 TXA 0.48 0.92
122 NB8 0.48 0.884615
123 ME8 0.48 0.851852
124 BIS 0.48 0.871795
125 PTJ 0.48 0.884615
126 139 0.477941 0.886076
127 LPA AMP 0.477273 0.851852
128 AR6 AR6 0.476923 0.958333
129 G5P 0.476923 0.909091
130 AFH 0.476923 0.873418
131 25L 0.47619 0.945205
132 25A 0.47541 0.958333
133 DZD 0.47482 0.897436
134 TXD 0.473684 0.921053
135 4UV 0.472868 0.933333
136 TYM 0.470149 0.945946
137 ADV 0.470085 0.894737
138 RBY 0.470085 0.894737
139 ARG AMP 0.469697 0.841463
140 4TA 0.467626 0.864198
141 48N 0.466165 0.884615
142 XAH 0.465116 0.851852
143 4UW 0.462687 0.897436
144 M24 0.461538 0.886076
145 IOT 0.459854 0.821429
146 T5A 0.456522 0.853659
147 EAD 0.455782 0.886076
148 MAP 0.455285 0.883117
149 BT5 0.453901 0.821429
150 A4P 0.452555 0.833333
151 UP5 0.451852 0.933333
152 PAP 0.445378 0.917808
153 AP0 0.445255 0.884615
154 4TC 0.445255 0.909091
155 YLP 0.444444 0.831325
156 P1H 0.443709 0.864198
157 AOC 0.442478 0.810811
158 Z5A 0.439189 0.833333
159 2A5 0.436975 0.857143
160 G A A A 0.43662 0.909091
161 COD 0.43662 0.802326
162 ADJ 0.435714 0.841463
163 YLC 0.434783 0.851852
164 YLB 0.434783 0.831325
165 U A G G 0.433566 0.921053
166 ATR 0.433333 0.90411
167 7MD 0.432836 0.851852
168 G5A 0.429752 0.790698
169 PO4 PO4 A A A A PO4 0.429688 0.943662
170 TAD 0.42963 0.873418
171 5AS 0.42735 0.770115
172 BTX 0.426573 0.831325
173 YLA 0.425532 0.831325
174 DSZ 0.425197 0.790698
175 NCN 0.424779 0.805556
176 UPA 0.42446 0.921053
177 VMS 0.424 0.8
178 54H 0.424 0.8
179 N0B 0.422819 0.853659
180 6AD 0.422764 0.85
181 AYB 0.422535 0.821429
182 7D3 0.422414 0.844156
183 YLY 0.421769 0.821429
184 TSB 0.420635 0.809524
185 ODP 0.41958 0.922078
186 AV2 0.419355 0.855263
187 FB0 0.419355 0.775281
188 A5A 0.419355 0.819277
189 NNR 0.419048 0.739726
190 A A A 0.418605 0.918919
191 LEU LMS 0.418605 0.793103
192 649 0.417266 0.775281
193 NMN AMP PO4 0.416667 0.933333
194 SSA 0.416 0.790698
195 P5A 0.415385 0.755556
196 LSS 0.414062 0.772727
197 A2R 0.412698 0.918919
198 52H 0.412698 0.790698
199 JB6 0.412214 0.896104
200 5N5 0.411215 0.783784
201 YSA 0.410448 0.811765
202 5CA 0.409449 0.790698
203 53H 0.409449 0.790698
204 ITT 0.408333 0.878378
205 7D4 0.408333 0.844156
206 NA7 0.407692 0.894737
207 5CD 0.407407 0.794521
208 0WD 0.406897 0.909091
209 A3P 0.40678 0.930556
210 AVV 0.40625 0.860759
211 RAB 0.40566 0.808219
212 ADN 0.40566 0.808219
213 XYA 0.40566 0.808219
214 FDA 0.405063 0.823529
215 GSU 0.40458 0.790698
216 7MC 0.404255 0.831325
217 NSS 0.403101 0.811765
218 6FA 0.402516 0.853659
219 NVA LMS 0.4 0.793103
220 PPS 0.4 0.817073
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: 139
This union binding pocket(no: 1) in the query (biounit: 2vut.bio1) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4TQG NDP 0.002634 0.42641 1.23839
2 3CH6 NAP 0.005886 0.43938 1.74825
3 3CH6 311 0.005886 0.43938 1.74825
4 1SNY NAP 0.002582 0.42384 1.87266
5 4NBW NAD 0.001901 0.43107 1.94553
6 1GR0 NAD 0.008151 0.41128 1.98864
7 2AWN ADP 0.04192 0.40602 2.27273
8 2XMY CDK 0.03328 0.40359 2.34899
9 2WSB NAD 0.01402 0.40691 2.3622
10 4J7U YTZ 0.001797 0.44925 2.43056
11 4J7U NAP 0.001797 0.44925 2.43056
12 1Z6Z NAP 0.001461 0.43893 2.48227
13 4NZ6 DLY 0.02413 0.41211 2.55591
14 1Y1P NMN AMP PO4 0.001506 0.4289 2.63158
15 1ZEM NAD 0.004801 0.41229 2.67176
16 2AE2 PTO 0.002353 0.44191 2.69231
17 2AE2 NAP 0.002353 0.44191 2.69231
18 1T26 NAI 0.01966 0.40203 2.79503
19 5UAV TFB 0.01626 0.40009 2.79503
20 5UAV NDP 0.01626 0.40009 2.79503
21 4D42 NAP 0.007995 0.42584 2.83688
22 4D42 W0I 0.007995 0.42584 2.83688
23 2J5V PCA 0.01076 0.43653 2.84091
24 2AG5 NAD 0.01066 0.40137 2.84553
25 4BVA NDP 0.01084 0.4023 2.98507
26 4Q9N NAI 0.004298 0.41987 3.02013
27 3AFN NAP 0.001539 0.442 3.10078
28 4YAG NAI 0.005347 0.42777 3.11419
29 4QED NAP 0.007003 0.40933 3.22581
30 1EDO NAP 0.002738 0.42973 3.27869
31 4PXE GLV 0.006112 0.43909 3.40909
32 4PIV NDP 0.009749 0.40432 3.40909
33 1G0N NDP 0.006901 0.41882 3.88693
34 1G0N PHH 0.008372 0.41799 3.88693
35 2GMM MAN MAN 0.029 0.40178 3.96825
36 2GMP NAG MAN 0.03116 0.40156 3.96825
37 5MBX SP5 0.02401 0.40648 3.97727
38 5MBX FAD 0.02401 0.40648 3.97727
39 1MXH DHF 0.01688 0.40135 3.98551
40 1EK6 UPG 0.01747 0.41368 4.02299
41 1EK6 NAI 0.01887 0.4107 4.02299
42 2AJH MET 0.0306 0.40044 4.08163
43 2GDZ NAD 0.0057 0.41323 4.11985
44 4O1M NAD 0.003393 0.42302 4.12698
45 2PD4 DCN 0.01047 0.40757 4.36364
46 2PD4 NAD 0.01127 0.40615 4.36364
47 1ZK4 NAP 0.001835 0.44231 4.38247
48 1GXU 2HP 0.049 0.41375 4.3956
49 4OSP NAP 0.0008379 0.40302 4.56274
50 5L4L NAP 0.007749 0.40041 4.65116
51 3QWI CUE 0.00342 0.43559 4.81482
52 3QWI NAP 0.006118 0.41442 4.81482
53 2DTX BMA 0.006343 0.42149 4.92424
54 1E7S NAP 0.003196 0.42678 4.98442
55 3OJF IMJ 0.006284 0.42364 5.05837
56 3OJF NDP 0.005266 0.42083 5.05837
57 2VOH CIT 0.02228 0.42773 5.09554
58 1AE1 NAP 0.001779 0.43923 5.12821
59 2YY7 NAD 0.003589 0.42329 5.12821
60 4ZA2 NAD 0.001154 0.44191 5.13834
61 3TN7 NJP 0.001993 0.43443 5.44747
62 5THQ NDP 0.004911 0.41604 5.51471
63 5CG1 NAD BBN 0.005762 0.43982 5.57377
64 1SB8 UD2 0.01168 0.41973 5.68182
65 1SB8 NAD 0.01095 0.4179 5.68182
66 5EPO NAP 0.0006364 0.45459 6.10687
67 2Q2V NAD 0.005912 0.41628 6.27451
68 1XHL NDP 0.003951 0.42274 6.39731
69 1QG6 TCL 0.006489 0.42488 6.51341
70 1ORR NAD 0.005467 0.41777 6.62824
71 5MSO NAP 0.0009956 0.44158 6.97674
72 4U7W NDP 0.003519 0.41954 6.97674
73 4PVD NDP 0.004306 0.41432 6.97674
74 2ZAT NAP 0.0006533 0.40099 6.97674
75 5L4S 6KX 0.003522 0.43083 7.2327
76 5L4S NAP 0.003522 0.43083 7.2327
77 2E5V FAD 0.0195 0.40305 8.23864
78 3C1O NAP 0.004134 0.41201 8.41121
79 3FIU POP 0.01904 0.41377 8.43373
80 3D3W NAP 0.007682 0.41126 8.60656
81 1PR9 NAP 0.007899 0.41073 8.60656
82 3NUG NAD 0.002999 0.42669 8.90688
83 3H4V NAP 0.003817 0.43344 9.30233
84 3H4V DVP 0.004526 0.43106 9.30233
85 1I2B NAD 0.00822 0.42833 9.30233
86 3MJE NDP 0.003258 0.42379 9.30233
87 4AVB CMP 0.008579 0.41452 9.30233
88 4EUE NAI 0.006765 0.4125 9.30233
89 2GZ3 NAP 0.02166 0.40497 9.30233
90 1VL0 NAI 0.007102 0.40353 9.30233
91 5K6A NAP 0.003715 0.42131 10.0694
92 5JDC NAP 0.003728 0.41988 10.0694
93 5JDI NAP 0.00463 0.41581 10.0694
94 4CM9 NAP 0.005 0.4157 10.0694
95 4CLO NAP 0.004628 0.41442 10.0694
96 4CME NAP 0.005341 0.41312 10.0694
97 4CLR NAP 0.005841 0.41143 10.0694
98 3JQ9 NAP 0.008374 0.40595 10.0694
99 5T2U NAP 0.001519 0.44224 10.0806
100 2DC1 NAD 0.007311 0.40585 10.1695
101 2Q1S NAI 0.006849 0.42382 11.1406
102 2VZ0 D64 0.02179 0.4197 11.194
103 2VZ0 NAP 0.02179 0.4197 11.194
104 2WD7 NAP 0.006337 0.4099 11.194
105 2PZM NAD 0.01524 0.40795 11.6279
106 2PZM UDP 0.01524 0.40795 11.6279
107 3GGO ENO 0.01346 0.40863 12.4204
108 5ITV NAI 0.001684 0.43763 13.3333
109 4HXY NDP 0.004396 0.41944 13.9269
110 2BGM NAJ 0.0006475 0.44958 13.9535
111 3O26 NDP 0.001797 0.43502 13.9535
112 4J1Q NDP 0.00421 0.41619 13.9535
113 5GT9 NAP 0.005324 0.41581 13.9535
114 4FC7 NAP 0.01396 0.40881 13.9535
115 4FC7 COA 0.01396 0.40881 13.9535
116 1KEW NAD 0.02136 0.40674 13.9535
117 1KEW TYD 0.02087 0.40647 13.9535
118 3OID NDP 0.01033 0.40559 13.9535
119 3CV2 OXL 0.04824 0.40066 13.9535
120 1R6D DAU 0.01565 0.41379 14.2433
121 1R6D NAD 0.01711 0.4127 14.2433
122 4XB2 HSE 0.003717 0.42391 16.2791
123 4XB2 NDP 0.002364 0.42064 16.2791
124 2NAD NAD 0.01445 0.40133 16.2791
125 2Q46 NAP 0.001801 0.40688 17.3913
126 1JA9 NDP 0.01196 0.40161 17.8832
127 3U4C NDP 0.00206 0.43103 18.6047
128 1BXK NAD 0.007901 0.40575 18.6047
129 1RSG FAD 0.01837 0.40338 18.6047
130 5IN4 NAP 0.04004 0.42893 20.9302
131 5IN4 6CK 0.03958 0.42893 20.9302
132 5IN4 GDP 0.03867 0.42893 20.9302
133 2V6G NAP 0.003663 0.4229 23.2558
134 1NFQ NAI 0.003172 0.42693 25.5814
135 4FWE FAD 0.01624 0.4067 25.5814
136 2EXX NAP 0.0000004194 0.47531 32.0261
137 5F5N NAD 0.00002318 0.51149 35.2941
138 2QZZ NAP 0.004146 0.42767 35.5346
139 2QZZ EMF 0.005173 0.42444 35.5346
Pocket No.: 2; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: 3
This union binding pocket(no: 2) in the query (biounit: 2vut.bio15) has 22 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2C91 TLA 0.02515 0.40631 1.77515
2 1Q9I TEO 0.02828 0.40707 3.40909
3 5E58 CPZ 0.01209 0.41042 3.97727
Pocket No.: 3; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: 1
This union binding pocket(no: 3) in the query (biounit: 2vut.bio11) has 22 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3DOO SKM 0.02099 0.40396 7.94224
Pocket No.: 4; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2vut.bio3) has 22 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: 8
This union binding pocket(no: 5) in the query (biounit: 2vut.bio13) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1UXG NAD 0.01709 0.40111 2.91262
2 2VVM FAD 0.01892 0.40099 5.68182
3 5U5G NAP 0.009574 0.40213 5.76271
4 3B9Q MLI 0.03813 0.40496 6.29139
5 2OG2 MLI 0.02166 0.42125 7.67045
6 2WCU FUC 0.0169 0.40577 13.9535
7 2OVW CBI 0.01987 0.40479 13.9535
8 1OYF MHN 0.02583 0.40443 15.7025
Pocket No.: 6; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: 4
This union binding pocket(no: 6) in the query (biounit: 2vut.bio10) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2JBM SRT 0.02522 0.41151 3.01003
2 1U7T NAD 0.00127 0.40052 3.06513
3 5JAX 6J7 0.01069 0.4025 4.44444
4 1YY5 FAD 0.02327 0.40036 18.6047
Pocket No.: 7; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 2vut.bio5) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: 5
This union binding pocket(no: 8) in the query (biounit: 2vut.bio12) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1MXH NAP 0.01796 0.40014 3.98551
2 4WEI GLC GAL 0.02175 0.40396 4.69314
3 4GLL NAD 0.01169 0.40206 11.6279
4 4QEK GLC 0.02288 0.40292 13.9535
5 3V1U NAD 0.007392 0.40279 23.2558
Pocket No.: 9; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 2vut.bio7) has 22 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: 12
This union binding pocket(no: 10) in the query (biounit: 2vut.bio16) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3QDY CBS 0.02473 0.40455 3.4965
2 3QDW NDG 0.02437 0.40328 3.4965
3 4KU7 PCG 0.01363 0.4081 3.92157
4 2OFD NGA 0.03127 0.40137 5.6338
5 3OF1 CMP 0.01393 0.41159 5.69106
6 3KMT SAH 0.01653 0.40043 6.97674
7 2BR6 HSL 0.00751 0.40254 7.93651
8 2XZ9 PYR 0.01965 0.41552 8.64198
9 4OFG PCG 0.01323 0.40873 9.02778
10 2BH9 NAP 0.01344 0.40116 11.6279
11 4R1S NAP 0.002163 0.4008 11.6279
12 1M6P M6P 0.0213 0.41061 14.4737
Pocket No.: 11; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 2vut.bio2) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 2vut.bio9) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 13; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: 7
This union binding pocket(no: 13) in the query (biounit: 2vut.bio14) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4AFK FLC 0.02885 0.4202 3.125
2 5C79 PBU 0.009824 0.42704 5.33333
3 2OFE NAG 0.01841 0.41269 5.6338
4 3N1S 5GP 0.0145 0.40156 6.72269
5 4Z2S NAG 0.01896 0.41197 11.9718
6 4Z2S NDG 0.01896 0.41197 11.9718
7 5GZZ GSH 0.03441 0.40351 15.1376
Pocket No.: 14; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 14) in the query (biounit: 2vut.bio4) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 15; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 15) in the query (biounit: 2vut.bio6) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 16; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 16) in the query (biounit: 2vut.bio8) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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