Receptor
PDB id Resolution Class Description Source Keywords
2W83 1.93 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE ARF6 GTPASE IN COMPLEX WITH A SPECIFIC EFFECTOR, JIP4 HOMO SAPIENS GOLGI APPARATUS PROTEIN TRANSPORT ER-GOLGI TRANSPORT ARF GTPASE EFFECTOR MYRISTATE CYTOPLASM NUCLEOTIDE-BINDING ALTERNATIVE SPLICING GTP-BINDING PHOSPHOPROTEIN HETEROTETRAMER TRANSPORT COILED-COIL LIPOPROTEIN COILED COIL
Ref.: THE STRUCTURAL BASIS OF ARF EFFECTOR SPECIFICITY: THE CRYSTAL STRUCTURE OF ARF6 IN A COMPLEX WITH JIP4. EMBO J. V. 28 2835 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
DIO A:1175;
C:1453;
C:1454;
E:1175;
E:1176;
E:1177;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
submit data
88.105 C4 H8 O2 C1COC...
GOL A:1176;
Invalid;
none;
submit data
92.094 C3 H8 O3 C(C(C...
GTP A:1173;
B:1173;
E:1173;
Valid;
Valid;
Valid;
none;
none;
none;
submit data
523.18 C10 H16 N5 O14 P3 c1nc2...
MG A:1174;
B:1174;
E:1174;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2W83 1.93 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE ARF6 GTPASE IN COMPLEX WITH A SPECIFIC EFFECTOR, JIP4 HOMO SAPIENS GOLGI APPARATUS PROTEIN TRANSPORT ER-GOLGI TRANSPORT ARF GTPASE EFFECTOR MYRISTATE CYTOPLASM NUCLEOTIDE-BINDING ALTERNATIVE SPLICING GTP-BINDING PHOSPHOPROTEIN HETEROTETRAMER TRANSPORT COILED-COIL LIPOPROTEIN COILED COIL
Ref.: THE STRUCTURAL BASIS OF ARF EFFECTOR SPECIFICITY: THE CRYSTAL STRUCTURE OF ARF6 IN A COMPLEX WITH JIP4. EMBO J. V. 28 2835 2009
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 2W83 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 2W83 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 2W83 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GTP; Similar ligands found: 147
No: Ligand ECFP6 Tc MDL keys Tc
1 GTP 1 1
2 GP3 0.921053 0.973684
3 GDP 0.909091 1
4 GSP 0.853659 0.948718
5 GNH 0.82716 0.986667
6 G1R 0.819277 0.986667
7 GAV 0.811765 0.961039
8 GNP 0.809524 0.973684
9 GCP 0.797619 0.973684
10 5GP 0.797468 0.986486
11 G 0.797468 0.986486
12 GMV 0.764706 0.973684
13 G2R 0.764045 0.961039
14 G5P 0.755319 0.973684
15 GTG 0.752688 0.936709
16 G2P 0.747126 0.961039
17 G3A 0.744681 0.973684
18 GDD 0.741935 0.961039
19 GKE 0.741935 0.961039
20 GDC 0.741935 0.961039
21 0O2 0.736264 0.986486
22 GP2 0.729412 0.961039
23 6CK 0.726316 0.936709
24 Y9Z 0.723404 0.902439
25 GPG 0.717391 0.961039
26 GFB 0.715789 0.961039
27 GDR 0.715789 0.961039
28 GDP MG 0.712644 0.923077
29 GDP BEF 0.704545 0.9
30 GPD 0.704082 0.925
31 JB2 0.693878 0.961039
32 GKD 0.693878 0.961039
33 GCP G 0.692308 0.935065
34 GDX 0.686869 0.973684
35 ALF 5GP 0.685393 0.888889
36 GTP MG 0.681319 0.923077
37 BEF GDP 0.681319 0.888889
38 GH3 0.681319 0.973333
39 YGP 0.677083 0.901235
40 G3D 0.67033 0.986486
41 GDP AF3 0.659574 0.888889
42 GDP ALF 0.659574 0.888889
43 DGT 0.659341 0.923077
44 GMP 0.658228 0.88
45 G4P 0.655914 0.986486
46 JB3 0.653846 0.948718
47 NGD 0.647619 0.961039
48 CAG 0.642202 0.880952
49 2MD 0.62963 0.891566
50 G G 0.622449 0.935065
51 MGP 0.619565 0.961039
52 U2G 0.616822 0.936709
53 6G0 0.612903 0.961039
54 MGD 0.612613 0.891566
55 TPG 0.608696 0.840909
56 CG2 0.605505 0.936709
57 GDP 7MG 0.601942 0.911392
58 FEG 0.601852 0.879518
59 ZGP 0.59633 0.869048
60 MD1 0.591304 0.891566
61 PGD 0.591304 0.925
62 3GP 0.590909 0.946667
63 GPX 0.581633 0.946667
64 DGI 0.580645 0.923077
65 IDP 0.576087 0.972973
66 DBG 0.567797 0.948718
67 FE9 0.555556 0.776596
68 2GP 0.555556 0.96
69 G4M 0.547619 0.880952
70 BGO 0.544643 0.924051
71 I2C FE2 CMO CMO 0.538462 0.808989
72 ATP 0.537634 0.92
73 G1G 0.533898 0.925
74 AQP 0.531915 0.92
75 5FA 0.531915 0.92
76 G A A A 0.525862 0.923077
77 U A G G 0.521368 0.935065
78 01G 0.518868 0.902439
79 ITT 0.510638 0.868421
80 P2G 0.510638 0.883117
81 GGM 0.504274 0.901235
82 G1R G1R 0.504065 0.924051
83 DGP 0.5 0.910256
84 PGD O 0.5 0.850575
85 MGO 0.5 0.864198
86 P1G 0.5 0.871795
87 DG 0.5 0.910256
88 GTA 0.495495 0.936709
89 B4P 0.489362 0.894737
90 AP5 0.489362 0.894737
91 IMP 0.489362 0.959459
92 7DT 0.484536 0.906667
93 G G U 0.482143 0.935065
94 GPC 0.479339 0.879518
95 G C 0.478992 0.9
96 BA3 0.478723 0.894737
97 ADP 0.473684 0.92
98 G2Q 0.471698 0.961039
99 G7M 0.46875 0.948052
100 25L 0.458716 0.907895
101 A2D 0.457447 0.894737
102 RGT 0.45045 0.909091
103 AGS 0.45 0.873418
104 SAP 0.45 0.873418
105 SGP 0.44898 0.82716
106 U G A 0.448529 0.888889
107 A4P 0.445378 0.869048
108 G G G RPC 0.442623 0.875
109 ACQ 0.441176 0.896104
110 ANP 0.441176 0.896104
111 8GT 0.441176 0.875
112 APC G U 0.44 0.886076
113 G U34 0.438017 0.888889
114 6AD 0.436893 0.841463
115 G G G C 0.433071 0.9125
116 UP5 0.432203 0.873418
117 35G 0.431373 0.933333
118 C2E 0.431373 0.921053
119 PCG 0.431373 0.933333
120 A G C C 0.429688 0.911392
121 5GP 5GP 0.427184 0.883117
122 TAT 0.427184 0.884615
123 APR 0.425743 0.894737
124 AR6 0.425743 0.894737
125 AN2 0.424242 0.907895
126 7DD 0.424242 0.906667
127 DG DG 0.423423 0.865854
128 AD9 0.421569 0.896104
129 M33 0.42 0.883117
130 7D4 0.42 0.835443
131 UCG 0.419847 0.911392
132 H6Y 0.419048 0.946667
133 G C C C 0.416667 0.924051
134 ACP 0.415842 0.896104
135 T5A 0.414634 0.802326
136 MGQ 0.412844 0.935897
137 ADQ 0.412844 0.871795
138 A1R 0.412844 0.839506
139 MGT 0.411215 0.823529
140 A G U 0.410072 0.888889
141 93A 0.41 0.833333
142 A22 0.407407 0.907895
143 CA0 0.405941 0.896104
144 ATF 0.40566 0.884615
145 AGO 0.404762 0.888889
146 MGV 0.401786 0.890244
147 CGP 0.4 0.86747
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2W83; Ligand: GTP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2w83.bio1) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 2W83; Ligand: GTP; Similar sites found: 436
This union binding pocket(no: 2) in the query (biounit: 2w83.bio1) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2GJ8 ALF GDP 0.0000000004921 0.64855 None
2 1PTR PRB 0.01328 0.42559 None
3 3DC4 ADP 0.000001831 0.45177 1.81818
4 1KO8 6PG 0.0005345 0.42515 1.81818
5 4M7V NAP 0.00828 0.40448 3.0303
6 2BEK ATP 0.0009812 0.43491 3.63636
7 1NJF AGS 0.0007232 0.43142 3.63636
8 1NJF ADP 0.0003805 0.43041 3.63636
9 1CM0 COA 0.01429 0.40186 3.63636
10 4QRH 0O2 0.0006788 0.426 3.8961
11 4WZ6 ATP 0.000006349 0.59956 4.24242
12 3ZFD ANP 0.0000001715 0.5288 4.24242
13 4GOX A3P 0.001293 0.42627 4.24242
14 5I34 GDP 0.00001598 0.54669 4.84848
15 1SVI GDP 0.00000004132 0.52788 4.84848
16 2Q2Y MKR 0.0007999 0.45577 4.84848
17 2Q2Y ADP 0.0008828 0.45507 4.84848
18 1XKV ATP 0.00008772 0.43876 4.84848
19 1RRC ADP 0.0000005112 0.43666 4.84848
20 4LPS GDP 0.00000005164 0.66567 5.19481
21 1D5C GDP 0.000000006663 0.60363 5.19481
22 5GJC ATP 0.00003409 0.53797 5.19481
23 5LB3 ADP 0.0003091 0.49736 5.19481
24 2IXE ATP 0.000276 0.44779 5.19481
25 2ZE7 DST 0.002569 0.41902 5.19481
26 3BOS CDP 0.00008365 0.41583 5.19481
27 1JJV ATP 0.00007314 0.40445 5.19481
28 4PU6 ASP 0.0118 0.42242 5.34351
29 4IOK ADP 0.0003193 0.45862 5.45455
30 4IOK XPO 0.0002361 0.45862 5.45455
31 2FFQ GSP 0.00000000001017 0.77008 6.06061
32 4ZNL BEF ADP 0.0001807 0.49638 6.06061
33 4WOP CTP 0.0001352 0.47562 6.06061
34 3QXC ATP 0.0003363 0.45594 6.06061
35 1FNN ADP 0.0005295 0.45455 6.06061
36 3KJI ADP 0.00008261 0.44571 6.06061
37 1UKZ ADP 0.001728 0.43497 6.06061
38 4P32 ADP 0.000656 0.43212 6.06061
39 4ZG4 VO4 ADP 0.0000003101 0.57507 6.49351
40 1UJ2 C5P 0.0001988 0.46547 6.49351
41 1UJ2 ADP 0.0002382 0.46219 6.49351
42 1GXU 2HP 0.001098 0.46053 6.59341
43 4KFU ACP 0.000001939 0.4378 6.60377
44 4NCN GTP 0.00000000001958 0.74767 6.66667
45 1JI0 ATP 0.00000348 0.60445 6.66667
46 1YRB GDP 0.000000004423 0.60038 6.66667
47 1DAK DPU 0.0001661 0.4894 6.66667
48 1S3G AP5 0.000642 0.46114 6.66667
49 4MKG AP5 0.0007675 0.45774 6.66667
50 1P72 ADP 0.002786 0.42475 6.66667
51 4TMK T5A 0.003817 0.42018 6.66667
52 1G41 ADP 0.0002657 0.41815 6.66667
53 3BFX A3P 0.004423 0.41424 6.66667
54 2J5V PCA 0.03589 0.40608 6.66667
55 3NHB ADP 0.00000416 0.60958 7.27273
56 3COB ADP 0.000002463 0.42611 7.27273
57 1SKQ GDP 0.00000000004931 0.60573 7.79221
58 1D2E GDP 0.00000000747 0.58936 7.79221
59 2B8W ALF 5GP 0.00000544 0.5263 7.79221
60 4R43 GDP 0.0002503 0.4956 7.79221
61 2DPY ADP 0.0006181 0.48853 7.79221
62 1ZUI SKM 0.0001503 0.48345 7.79221
63 2FAH GDP 0.000314 0.42719 7.79221
64 1BG2 ADP 0.0000006402 0.42368 7.79221
65 1IN4 ADP 0.0006253 0.4218 7.79221
66 3BER AMP 0.01423 0.40956 7.79221
67 1D2N ANP 0.002712 0.40409 7.79221
68 5L3V GDP 0.000001471 0.58808 7.87879
69 2ZFI ADP 0.000006357 0.57367 7.87879
70 4R2I ANP 0.001194 0.47379 7.87879
71 4QOS ADP 0.0008136 0.46008 7.87879
72 5X40 ACP 0.0003498 0.44961 7.87879
73 2VF7 ADP 0.0001604 0.41475 7.87879
74 4R98 GNH 0.00000001669 0.69998 8.48485
75 5GVR LMR 0.0003596 0.51084 8.48485
76 1WF3 GNP 0.0000000006007 0.69608 9.09091
77 2RCN GDP 0.0000000002758 0.59655 9.09091
78 4CVN ADP 0.0000294 0.5567 9.09091
79 4BQS ADP 0.00002989 0.54077 9.09091
80 1IWE IMP 0.0002285 0.52099 9.09091
81 1M7G ADX 0.00003872 0.50249 9.09091
82 5BQ5 ADP BEF 0.0001116 0.50034 9.09091
83 1M7G ADP 0.00004067 0.49805 9.09091
84 3W5J GDP 0.00000001298 0.48652 9.09091
85 1V8K ANP 0.000001612 0.47682 9.09091
86 1M7G AV2 0.0000007788 0.47143 9.09091
87 3IIJ ADP 0.000002181 0.47034 9.09091
88 2C9O ADP 0.0005341 0.45009 9.09091
89 2JLR ANP 0.0001246 0.43416 9.09091
90 4FRZ ADP 0.000009203 0.41972 9.09091
91 4FCW ADP 0.0002373 0.41715 9.09091
92 2YOH WMJ 0.0001913 0.41416 9.09091
93 2WHX ADP 0.00001179 0.41193 9.09091
94 4NZ6 DGL 0.02407 0.4077 9.09091
95 3CV2 OXL 0.03332 0.40125 9.09091
96 1ZIN AP5 0.001039 0.45197 9.69697
97 1CR1 TTP 0.0007902 0.42423 9.69697
98 1F9V ADP 0.000009779 0.41975 9.69697
99 2AWN ADP 0.0000003342 0.40996 9.69697
100 1T8U UAP SGN IDS SGN 0.01152 0.406 9.69697
101 4JBL MET 0.02483 0.40562 9.69697
102 5KSZ GCP 0.00000101 0.5957 10.303
103 5KUT GDP 0.0000001127 0.53053 10.303
104 5AOG IAC 0.004835 0.48991 10.303
105 3VX3 ADP 0.0003416 0.43419 10.303
106 4U00 ADP 0.000001512 0.40926 10.303
107 2WIC GNP 0.0000000001749 0.78367 10.3896
108 4RD0 GDP 0.000000000003405 0.76601 10.3896
109 2QN6 GDP 0.00000000004117 0.60711 10.3896
110 4IEE AGS 0.0004036 0.49154 10.3896
111 1FP6 ADP 0.000247 0.42599 10.3896
112 3R7F CP 0.02019 0.4127 10.3896
113 2XAU ADP 0.0004941 0.40597 10.3896
114 3FYH ADP 0.001603 0.42421 10.9091
115 1T5C ADP 0.000001149 0.41902 10.9091
116 2GDJ ANP 0.000126 0.41372 10.9091
117 1B0U ATP 0.0005723 0.40855 11.0687
118 3TK1 GDP 0.000000001539 0.55473 11.5152
119 1NN5 ANP 0.000106 0.48388 11.5152
120 1IHU ADP 0.0003979 0.44731 11.5152
121 1IHU AF3 0.0003219 0.44533 11.5152
122 1YZQ GNP 0.00000000001031 0.76984 11.6883
123 4LC1 GDP 0.00000001737 0.69913 11.6883
124 1TQ4 GDP 0.00000003564 0.62874 11.6883
125 4P4T GDP 0.000001075 0.57216 11.6883
126 1SQ5 ADP 0.00000945 0.55759 11.6883
127 1JWY GDP 0.0000002867 0.53425 11.6883
128 1JWY ADP 0.00002068 0.44613 11.6883
129 3UIE ANP 0.00004537 0.44204 11.6883
130 5TSH ANP 0.00004542 0.42907 11.6883
131 2VVG ADP 0.0000004794 0.42811 11.6883
132 1QF9 C5P 0.003384 0.42608 11.6883
133 2ZPA ADP 0.0006626 0.42073 11.6883
134 2CHG ANP 0.0005972 0.41832 11.6883
135 2F5X ASP 0.01986 0.41214 11.6883
136 2JAQ DCP 0.003088 0.41072 11.6883
137 1VHT BA3 0.001053 0.40242 11.6883
138 1W5T ANP 0.00325 0.40012 11.6883
139 2HT6 GDP 0.00000000001294 0.61929 12.1212
140 1A4R GDP 0.000000008726 0.61231 12.1212
141 1MKY GDP 0.00000000009103 0.6109 12.1212
142 2CJW GDP 0.0000000001572 0.60505 12.1212
143 1A4R GNH 0.00000001412 0.59579 12.1212
144 1GRN GDP 0.0000001317 0.55797 12.1212
145 2NGR GDP 0.00000006266 0.54118 12.1212
146 2NGR AF3 0.0000001041 0.49522 12.1212
147 1GRN AF3 0.0000002569 0.48613 12.1212
148 1X1R GDP 0.000000004272 0.66048 12.7273
149 4D81 ADP 0.0003554 0.47169 12.7273
150 4OI4 ATP 0.001529 0.42328 12.7273
151 1G7S GDP 0.0000000003266 0.77071 12.987
152 3WXM GTP 0.0000000000763 0.73028 12.987
153 1DAR GDP 0.0000000003426 0.59633 12.987
154 2C04 GCP 0.00001038 0.53527 12.987
155 1YTM ATP 0.0003057 0.46046 12.987
156 2QEN ADP 0.00005329 0.45618 12.987
157 4QM7 GTP 0.000006331 0.45302 12.987
158 1OS1 PYR 0.001371 0.43508 12.987
159 3FVQ ATP 0.0004251 0.43381 12.987
160 1OS1 ATP 0.001631 0.4304 12.987
161 1OXV ANP 0.00001356 0.42793 12.987
162 4YS0 ADP 0.003123 0.42463 12.987
163 1G6H ADP 0.0000004354 0.42055 12.987
164 3H4S ADP 0.00000347 0.41854 12.987
165 3DZD ADP 0.0008784 0.40787 12.987
166 5WRJ A3P 0.00402 0.40769 12.987
167 1LVG ADP 0.000000501 0.46298 13.3333
168 3FWY ADP 0.00007838 0.45179 13.3333
169 1G7C 5GP 0.00000004273 0.53354 13.9394
170 4WZA ADP 0.00009702 0.51645 13.9394
171 4WZA ACP 0.00009702 0.51645 13.9394
172 3DEF GDP 0.00001119 0.47815 13.9394
173 1OE0 TTP 0.005879 0.40397 13.9394
174 1JJ7 ADP 0.0000003919 0.68607 14.2857
175 2HF9 GSP 0.00000001949 0.65693 14.2857
176 4HI0 GDP 0.00000006738 0.61691 14.2857
177 5FG3 GDP 0.000000000112 0.59529 14.2857
178 3P4X ADP 0.0000453 0.42187 14.2857
179 5E5U MLI 0.008833 0.42113 14.2857
180 1R6B ADP 0.0002402 0.41378 14.2857
181 4DID GDP 0.00000008781 0.5349 14.4737
182 1H65 GDP 0.0001035 0.46612 14.5455
183 1L2T ATP 0.0009788 0.42409 15.1515
184 3PQC GDP 0.000001267 0.5911 15.5844
185 3BFV ADP 0.000008037 0.56868 15.5844
186 4NON GDP 0.0000002029 0.54133 15.5844
187 2OFW ADX 0.00003365 0.51597 15.5844
188 2PEZ DAT 0.00003133 0.50811 15.5844
189 4XTR ADP 0.0001718 0.4759 15.5844
190 4XVU ATP 0.0001731 0.46217 15.5844
191 4XTR ATP 0.0001817 0.4613 15.5844
192 3ZS9 ADP ALF 0.00005072 0.46092 15.5844
193 1Z6T ADP 0.0005202 0.4594 15.5844
194 2WOJ ADP ALF 0.00006238 0.45778 15.5844
195 2QG6 NMN 0.0005856 0.44755 15.5844
196 1X6V ADP 0.00009467 0.43705 15.5844
197 1F2U ATP 0.0009746 0.43662 15.5844
198 3QKT ANP 0.0008255 0.43614 15.5844
199 2PEZ GGZ 0.00003133 0.43569 15.5844
200 3B5J 12D 0.00001806 0.4159 15.5844
201 3H86 AP5 0.001131 0.44421 15.625
202 3QF7 ANP 0.0003226 0.43188 16
203 4B47 GDP 0.0000000000199 0.61407 16.8831
204 3EC1 GDP 0.000000005303 0.57465 16.8831
205 1W7J ADP BEF 0.000001436 0.5736 16.8831
206 5H56 ADP 0.00009033 0.48516 16.8831
207 5H56 TYD 0.00009033 0.48516 16.8831
208 1PUJ GNP 0.0000000001916 0.64504 16.9697
209 3Q85 GNP 0.0000000001541 0.60599 16.9697
210 3RLF ANP 0.0005964 0.44009 16.9697
211 2RGX AP5 0.0003273 0.47638 18.1818
212 2IYL GDP 0.000003114 0.47583 18.1818
213 3TMK T5A 0.0002174 0.46733 18.1818
214 3FB4 AP5 0.0007131 0.45914 18.1818
215 4HSE ADP 0.0002347 0.40954 18.1818
216 2WKQ GTP 0.000000002565 0.66065 18.7879
217 2J0V GDP 0.00000009282 0.53436 18.7879
218 2BIF ANP 0.0005521 0.45626 18.7879
219 2BIF SIN 0.0009878 0.45626 18.7879
220 4U5X GNP 0.000000002072 0.63436 19.3939
221 1NVV GNP 0.0000000000867 0.7312 19.4805
222 1NVU GTP 0.0000000000899 0.73054 19.4805
223 2C5L GTP 0.00000000009321 0.72989 19.4805
224 1LFD GNP 0.000000000113 0.72319 19.4805
225 3DDC GNP 0.0000000001839 0.71756 19.4805
226 4K81 GTP 0.0000000002536 0.71474 19.4805
227 2UZI GTP 0.0000000001965 0.7132 19.4805
228 1WQ1 AF3 0.0000002819 0.67381 19.4805
229 3B9Q MLI 0.000001514 0.63167 19.4805
230 3KUD GDP 0.00000001335 0.61263 19.4805
231 1WQ1 GDP 0.00000008913 0.59732 19.4805
232 5L3R GCP 0.000001136 0.54169 19.4805
233 1G3Q ADP 0.00002408 0.53818 19.4805
234 1CLU DBG 0.0000000231 0.48121 19.4805
235 3A4M ADP 0.000003678 0.44034 19.4805
236 1ION ADP 0.0001099 0.43248 19.4805
237 4YMU ATP 0.00002731 0.55025 20
238 2KIN ADP 0.000001079 0.41831 20
239 2C78 GNP 0.000000000004779 0.7834 20.6061
240 2C77 GNP 0.000000000001403 0.76716 20.6061
241 2NCD ADP 0.0000009067 0.64263 20.7792
242 4ITR GDP 0.0000009508 0.53281 20.7792
243 4PFO ADP 0.00001017 0.51728 20.7792
244 2VB6 ADP BEF 0.000008339 0.51631 20.7792
245 1QF5 GDP 0.00007432 0.51294 20.7792
246 4IDN GNP 0.00002297 0.50328 20.7792
247 1QF5 RPL 0.004916 0.45921 20.7792
248 1W0J ADP 0.0001181 0.43711 20.7792
249 2V7Q ATP 0.00008216 0.435 20.7792
250 2CK3 ANP 0.002274 0.42689 20.7792
251 4TTQ ATP 0.00008441 0.42502 20.7792
252 2XT3 ADP 0.000002381 0.4245 20.7792
253 2CK3 ADP 0.003401 0.40899 20.7792
254 1W0J ADP BEF 0.001958 0.40395 20.7792
255 5KSP GDP 0.0000001873 0.63893 21.8182
256 1G8S MET 0.009506 0.42989 21.8182
257 2BVN GNP 0.00000000002087 0.80157 22.0779
258 5HCN GCP 0.00000002899 0.67765 22.0779
259 1D8T GDP 0.0000000001607 0.60488 22.0779
260 2HCJ GDP 0.00000000006508 0.60264 22.0779
261 4AG5 ADP 0.000007693 0.59394 22.0779
262 2XTZ GSP 0.000000000001387 0.8026 23.0303
263 2ZEJ GDP 0.0000001425 0.59686 23.0303
264 5MZN ADP 0.005425 0.43988 23.3766
265 2CE7 ADP 0.0001729 0.42325 23.3766
266 1M7B GTP 0.000000002108 0.68128 23.6364
267 1GWN GTP 0.00000000121 0.65571 23.6364
268 1KMQ GNP 0.0000000003022 0.69883 24.2424
269 3A1S GDP 0.000002886 0.5822 24.4186
270 5L3S GNP 0.000005485 0.5147 24.6753
271 3E70 GDP 0.000002364 0.48484 24.6753
272 5L3W GDP 0.00001997 0.46188 24.6753
273 5L3S G 0.006859 0.43947 24.6753
274 1XP8 AGS 0.00004266 0.41875 24.6753
275 4HAT GNP 0.000000000008414 0.77685 24.8485
276 5UWP GNP 0.000000000008482 0.7767 24.8485
277 5UWI GNP 0.000000000007626 0.7753 24.8485
278 5UWT GNP 0.000000000007882 0.77471 24.8485
279 1IBR GNP 0.00000000001691 0.76085 24.8485
280 3GJ0 GDP 0.000000001049 0.75879 24.8485
281 5UWU GNP 0.000000000007462 0.71385 24.8485
282 5UWQ GNP 0.000000000007488 0.71384 24.8485
283 5UWW GNP 0.000000000007738 0.71333 24.8485
284 5UWR GNP 0.000000000007784 0.71322 24.8485
285 5UWJ GNP 0.000000000008438 0.71197 24.8485
286 5UWH GNP 0.000000000008455 0.71193 24.8485
287 5DIF GNP 0.000000000008519 0.71188 24.8485
288 5DHF GNP 0.00000000000918 0.71075 24.8485
289 5UWO GNP 0.000000000009258 0.7106 24.8485
290 5DI9 GNP 0.00000000001105 0.69302 24.8485
291 5UWS GNP 0.00000000001213 0.69173 24.8485
292 3CH5 GDP 0.0000000001745 0.62094 24.8485
293 5BXQ GDP 0.0000000002816 0.61489 24.8485
294 3GJ3 GDP 0.0000000006592 0.58982 24.8485
295 5UQW GDP 0.000000002847 0.66193 25.3968
296 3GJ8 GDP 0.0000000001999 0.78089 25.4545
297 3REF GDP 0.00000001841 0.63307 25.4545
298 3GJ5 GDP 0.0000000002788 0.6154 25.4545
299 3GJ7 GDP 0.000000001057 0.58438 25.4545
300 3GJ4 GDP 0.000000001076 0.58435 25.4545
301 1K6M AGS 0.0001805 0.46143 25.4545
302 5TAR GDP 0.000000001829 0.71295 25.9459
303 5TB5 GDP 0.0000000009991 0.61047 25.9459
304 5M04 GDP 0.00000000001721 0.86146 25.974
305 4PX9 ADP 0.0004263 0.49035 25.974
306 3Q72 GNP 0.0000000005477 0.57723 26.0606
307 4H1V GNP 0.000002542 0.56253 26.0606
308 1NRJ GTP 0.000000000003452 0.7533 26.6055
309 1TAD GDP 0.000000000003576 0.79574 26.6667
310 1TAD ALF 0.000000000003576 0.69717 26.6667
311 3T12 GDP ALF 0.0000000000052 0.78186 27.2727
312 1GOJ ADP 0.0000002742 0.68676 27.2727
313 1GOT GDP 0.00000000567 0.6365 27.2727
314 3T1O GDP 0.0000000003949 0.62041 27.2727
315 1KK8 BEF ADP 0.00001464 0.47554 27.2727
316 1P9B GDP 0.00005947 0.45811 27.2727
317 1B7T ADP 0.0001086 0.43101 27.2727
318 1XMV ADP 0.00005031 0.43031 27.2727
319 3KTA AP5 0.0004239 0.41416 27.2727
320 1KAO GDP 0.00000002755 0.57871 27.5449
321 5O2T GSP 0.0000000003413 0.65564 28.4024
322 1FQJ ALF 0.00000001289 0.73939 28.4848
323 1FQK ALF 0.00000003672 0.7227 28.4848
324 1FQJ GDP 0.0000000008402 0.68058 28.4848
325 1FQK GDP 0.000000001111 0.67558 28.4848
326 1XTQ GDP 0.000000001732 0.66766 28.4848
327 3T5G GDP 0.000000003515 0.59071 28.4848
328 5I0H ADP BEF 0.0000002966 0.55795 28.5714
329 2W58 ADP 0.000002194 0.408 28.5714
330 1BH2 GSP 0.00000000000233 0.80358 29.0909
331 4HDO GNP 0.0000000001033 0.72801 29.0909
332 5KDO GDP 0.00000000185 0.68371 29.0909
333 2OM2 GDP 0.000000002269 0.67991 29.0909
334 1Y3A GDP 0.000000001031 0.67691 29.0909
335 1GUA GNP 0.0000000001203 0.67151 29.0909
336 1GP2 GDP 0.000000008217 0.63987 29.0909
337 1U8Z GDP 0.00000001139 0.63404 29.0909
338 1SVK ALF GDP 0.0000000000008159 0.82611 29.697
339 2ODE ALF GDP 0.000000000001678 0.70731 29.697
340 5UFQ GNP 0.000000003293 0.6292 29.697
341 5XCO GDP 0.0000000142 0.58236 29.697
342 4DCT GDP 0.000000003782 0.57886 29.697
343 1AZT GSP 0.000000000001066 0.81791 29.8701
344 1CS4 GSP 0.0000000000008263 0.73239 29.8701
345 3MD0 GDP 0.00000000008104 0.59657 29.8701
346 3ZQ6 ADP ALF 0.0000503 0.49041 29.8701
347 1E96 GTP 0.000000001031 0.68327 30.303
348 4DSU GDP 0.000000002664 0.66906 30.303
349 1MH1 GNP 0.0000000001072 0.67368 30.9091
350 2W2X GSP 0.0000000008115 0.66166 30.9091
351 2FJU GSP 0.000000001331 0.65426 30.9091
352 1HE1 GDP 0.0000009205 0.56833 30.9091
353 1G4U GDP 0.000001384 0.56737 30.9091
354 1HE1 AF3 0.00001914 0.5663 30.9091
355 1G4U AF3 0.00008474 0.53899 30.9091
356 2XTN GTP 0.000008481 0.51601 30.9091
357 4MKF AP5 0.001074 0.45246 31.1688
358 1XEX ATP 0.002564 0.40134 31.1688
359 2WJG GDP 0.0000000005555 0.7723 31.5152
360 1VG8 GNP 0.00000000001398 0.76431 31.5152
361 3SBD GNP 0.0000000009125 0.65216 31.5152
362 1Z0F GDP 0.0000000001846 0.61965 31.5152
363 1VG1 GDP 0.000000000488 0.60261 31.5152
364 2WJH GDP 0.000000001126 0.59837 31.5152
365 1VG9 GDP 0.000000001302 0.59222 31.5152
366 1VG0 GDP 0.000000008473 0.58788 31.5152
367 2WJH FLC 0.0000003061 0.52375 31.5152
368 1ZOY UQ1 0.02368 0.40663 31.5152
369 1S8F GDP 0.0000000003523 0.70875 32.1212
370 2A5J GDP 0.000000004121 0.70719 32.1212
371 1CXZ GSP 0.0000000002328 0.69383 32.1212
372 1TX4 ALF GDP 0.00000000144 0.67095 32.1212
373 2GCO GNP 0.000000001483 0.6293 32.1212
374 2GCN GDP 0.0000000595 0.59651 32.1212
375 1OW3 GDP 0.0000001376 0.5579 32.1212
376 5HPY GDP 0.0000001442 0.55683 32.1212
377 1DS6 GDP 0.0000000201 0.54665 32.1212
378 4D0N GDP 0.0000000242 0.54239 32.1212
379 5IRC GDP 0.0000002202 0.53174 32.1212
380 3CX8 GSP 0.000000000001519 0.81142 32.4675
381 5N69 ADP 0.000003582 0.56277 32.4675
382 2Y65 ADP 0.000002604 0.42385 32.4675
383 2BME GNP 0.000000000003569 0.78555 32.7273
384 4C4P GNP 0.00000000007958 0.73275 32.7273
385 2D7C GTP 0.00000000007431 0.73075 32.7273
386 1OIV GDP 0.000000002498 0.66731 32.7273
387 3RWO GDP 0.000000006438 0.65022 32.7273
388 2F9L GDP 0.00000006838 0.60205 32.7273
389 1Z0K GTP 0.000000000008407 0.76277 33.3333
390 1OIX GDP 0.0000000004421 0.69856 33.3333
391 2HV8 GTP 0.0000000005693 0.694 33.3333
392 1Z2A GDP 0.00000001409 0.63024 33.3333
393 1G16 GDP 0.0000002713 0.56971 33.3333
394 2ZR9 DTP 0.0000324 0.42899 33.7662
395 1WA5 GTP 0.00000000002458 0.64321 33.9394
396 5CK5 GDP 0.000000001477 0.56629 33.9394
397 2QZ4 ADP 0.00008409 0.43762 33.9394
398 1EK0 GNP 0.00000000001897 0.75539 34.5455
399 3AB3 GDP 0.000000003366 0.63389 34.5455
400 1Z08 GNP 0.00000003128 0.61601 34.5455
401 1RYH GNP 0.000000000953 0.61269 34.5455
402 3M1I GTP 0.000000000008077 0.77426 35.0649
403 1G6O ADP 0.00005161 0.51597 35.0649
404 1OFH ADP 0.0003309 0.41569 35.0649
405 2A9K GDP 0.00000001598 0.58889 35.7576
406 1R2Q GNP 0.00000000001308 0.78635 36.3636
407 1TU3 GNP 0.00000000002803 0.74835 36.3636
408 1ZC3 GNP 0.0000000007272 0.69261 36.3636
409 1NF3 GNP 0.000000001574 0.64353 36.3636
410 1KY3 GDP 0.00000002206 0.57361 36.3636
411 5HR5 ADP 0.0002565 0.42928 36.3636
412 3ZIA ATP 0.00008643 0.42908 36.3636
413 3ZIA ADP 0.0002026 0.42822 36.3636
414 5HR5 FLC 0.004167 0.41726 36.3636
415 1YVD GNP 0.00000000002305 0.75188 36.9697
416 3BC1 GNP 0.0000000000755 0.73047 36.9697
417 3MJH GTP 0.00000000000803 0.72998 36.9697
418 1YZN GNP 0.00000000006745 0.68065 36.9697
419 2BCG GDP 0.00000003843 0.63536 36.9697
420 3RAB GNP 0.00000000004163 0.74121 37.5758
421 1Z0J GTP 0.000000000009684 0.71191 37.5758
422 1KK1 GNP 0.00000000009331 0.5984 37.6623
423 1I4D GDP 0.00000008845 0.51751 37.6623
424 1YQT ADP 0.00002064 0.40876 37.6623
425 1QHH ATP 0.0155 0.40386 37.6623
426 3QBT GNP 0.000000000003302 0.74411 38.1818
427 2FH5 GTP 0.000000000003113 0.75383 38.7879
428 1F5N GNP 0.000005742 0.49643 38.961
429 1Z06 GNP 0.000000000002988 0.78507 39.3939
430 2G77 GDP 0.0000000001156 0.75631 39.3939
431 2G77 AF3 0.000000323 0.66572 39.3939
432 4PJ3 ANP 0.007578 0.411 40.2597
433 1Z0A GDP 0.0000000003686 0.62325 41.2121
434 2QTV GNP 0.000000000001206 0.80136 46.6667
435 1M2O GNP 0.000000000003324 0.78683 46.6667
436 1F6B GDP 0.00000000003095 0.64061 48.4848
Pocket No.: 3; Query (leader) PDB : 2W83; Ligand: GTP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2w83.bio1) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Feedback