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- Structure Biounit | Ligand Information
- PDB : .ZIP | .CSV
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- Class : .ZIP | .CSV
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 2 families. | |||||
1 | 4BMK | - | PLP MYB | n/a | n/a |
2 | 2XBN | - | PMP | C8 H13 N2 O5 P | Cc1c(c(c(c.... |
3 | 2W8W | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
4 | 2W8J | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 2 families. | |||||
1 | 4BMK | - | PLP MYB | n/a | n/a |
2 | 2XBN | - | PMP | C8 H13 N2 O5 P | Cc1c(c(c(c.... |
3 | 2W8W | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
4 | 2W8J | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
No: | Ligand | ECFP6 Tc | MDL keys Tc |
---|---|---|---|
1 | PLS | 1 | 1 |
2 | PPD | 0.8 | 0.966667 |
3 | C6P | 0.8 | 0.966667 |
4 | PY5 | 0.787879 | 0.90625 |
5 | PGU | 0.764706 | 0.935484 |
6 | 7XF | 0.764706 | 0.935484 |
7 | PDG | 0.764706 | 0.935484 |
8 | LPI | 0.753623 | 0.865672 |
9 | QLP | 0.753623 | 0.878788 |
10 | PY6 | 0.742857 | 0.878788 |
11 | ORX | 0.732394 | 0.920635 |
12 | N5F | 0.732394 | 0.920635 |
13 | PDA | 0.727273 | 0.918033 |
14 | PP3 | 0.727273 | 0.918033 |
15 | PDD | 0.727273 | 0.918033 |
16 | PL4 | 0.726027 | 0.920635 |
17 | PE1 | 0.722222 | 0.920635 |
18 | 2BK | 0.705882 | 0.95 |
19 | TLP | 0.705882 | 0.95 |
20 | 2BO | 0.705882 | 0.95 |
21 | 0PR | 0.702703 | 0.95082 |
22 | ILP | 0.690141 | 0.888889 |
23 | IN5 | 0.656716 | 0.885246 |
24 | AQ3 | 0.65 | 0.90625 |
25 | PLG | 0.632353 | 0.934426 |
26 | 76U | 0.626667 | 0.890625 |
27 | 5PA | 0.611111 | 0.920635 |
28 | P1T | 0.605634 | 0.920635 |
29 | CBA | 0.6 | 0.904762 |
30 | IK2 | 0.597222 | 0.890625 |
31 | KAM | 0.580247 | 0.861538 |
32 | EA5 | 0.576923 | 0.892308 |
33 | 33P | 0.575342 | 0.84127 |
34 | PLA | 0.573333 | 0.90625 |
35 | PMG | 0.571429 | 0.878788 |
36 | PXP | 0.5625 | 0.830508 |
37 | PMH | 0.546667 | 0.72973 |
38 | GT1 | 0.545455 | 0.746032 |
39 | HEY | 0.544304 | 0.876923 |
40 | PSZ | 0.5375 | 0.808824 |
41 | 3LM | 0.5375 | 0.823529 |
42 | PMP | 0.530303 | 0.866667 |
43 | RW2 | 0.518072 | 0.863636 |
44 | PXG | 0.518072 | 0.873016 |
45 | DCS | 0.5125 | 0.794521 |
46 | PL2 | 0.5125 | 0.794118 |
47 | DN9 | 0.5 | 0.855072 |
48 | 7TS | 0.5 | 0.736842 |
49 | KOU | 0.493506 | 0.868852 |
50 | CKT | 0.493506 | 0.887097 |
51 | PL8 | 0.476744 | 0.791667 |
52 | 9YM | 0.47619 | 0.875 |
53 | 7B9 | 0.465909 | 0.826087 |
54 | F0G | 0.461538 | 0.774194 |
55 | PLP 2KZ | 0.444444 | 0.84127 |
56 | OJQ | 0.439024 | 0.710526 |
57 | PL6 | 0.433735 | 0.793651 |
58 | PLR | 0.432836 | 0.704918 |
59 | EVM | 0.432099 | 0.854839 |
60 | 0JO | 0.43038 | 0.753846 |
61 | PPE | 0.428571 | 0.920635 |
62 | FEJ | 0.428571 | 0.793651 |
63 | PPG | 0.426966 | 0.861538 |
64 | P0P | 0.422535 | 0.779661 |
65 | RMT | 0.422222 | 0.80303 |
66 | PUS | 0.420455 | 0.746479 |
67 | CAN PLP | 0.420455 | 0.835821 |
68 | 1D0 | 0.419355 | 0.863636 |
69 | PLP | 0.414286 | 0.779661 |
70 | 4LM | 0.4125 | 0.738462 |
71 | Z98 | 0.411765 | 0.84375 |
72 | AN7 | 0.410256 | 0.754098 |
73 | EPC | 0.410256 | 0.741935 |
74 | PZP | 0.408451 | 0.754098 |
75 | LCS | 0.406977 | 0.733333 |
76 | 5DK | 0.406593 | 0.818182 |
77 | EQJ | 0.406593 | 0.818182 |
78 | 0LD | 0.405941 | 0.627907 |
79 | FOO | 0.405063 | 0.790323 |
80 | PL5 | 0.404494 | 0.8125 |
81 | P70 | 0.404494 | 0.777778 |
82 | FEV | 0.402439 | 0.727273 |
83 | 6DF | 0.4 | 0.703125 |
No: | Ligand | Similarity coefficient |
---|---|---|
1 | SER PLP | 0.9965 |
2 | PLP SER | 0.9903 |
3 | PLP ALO | 0.9650 |
4 | PLP CYS | 0.9593 |
5 | PLI | 0.9519 |
6 | PLP GLY | 0.9432 |
7 | GLY PLP | 0.9429 |
8 | PLP 2TL | 0.9388 |
9 | KET | 0.9376 |
10 | ASP PLP | 0.9376 |
11 | L7N | 0.9295 |
12 | MET PLP | 0.9264 |
13 | PLP MET | 0.9232 |
14 | MPM | 0.9224 |
15 | 3QP | 0.9195 |
16 | PLP 0A0 | 0.9152 |
17 | PM9 | 0.9147 |
18 | HCP | 0.9134 |
19 | PLP AOA | 0.9130 |
20 | PLP 2ML | 0.9083 |
21 | LEU PLP | 0.9019 |
22 | PLP 999 | 0.8819 |
23 | 07U | 0.8795 |
24 | PLP SEP | 0.8732 |
25 | IRG | 0.8682 |
26 | 8JF | 0.8619 |
27 | P19 | 0.8540 |
This union binding pocket(no: 1) in the query (biounit: 2xbn.bio1) has 48 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
1 | 5TXR | PLP | 42.1546 |
2 | 1DJ9 | KAM | 46.3542 |
This union binding pocket(no: 2) in the query (biounit: 2xbn.bio1) has 48 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |