Receptor
PDB id Resolution Class Description Source Keywords
2Y8E 1.39 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF D. MELANOGASTER RAB6 GTPASE BOUND TO GMPPNP DROSOPHILA MELANOGASTER HYDROLASE NUCLEOTIDE BINDING GTP BINDING
Ref.: STRUCTURE OF THE DROSOPHILA MELANOGASTER RAB6 GTPASE AT 1.4 A RESOLUTION ACTA CRYSTALLOGR.,SECT.F V. 67 744 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP A:1176;
B:1176;
Valid;
Valid;
none;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG A:1177;
B:1177;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
SO4 A:1175;
B:1174;
B:1175;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2Y8E 1.39 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF D. MELANOGASTER RAB6 GTPASE BOUND TO GMPPNP DROSOPHILA MELANOGASTER HYDROLASE NUCLEOTIDE BINDING GTP BINDING
Ref.: STRUCTURE OF THE DROSOPHILA MELANOGASTER RAB6 GTPASE AT 1.4 A RESOLUTION ACTA CRYSTALLOGR.,SECT.F V. 67 744 2011
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (8)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
5 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
6 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
50% Homology Family (246)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
19 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
27 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
36 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
40 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
41 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
45 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
47 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
49 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
57 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
61 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
78 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
81 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
84 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
85 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
87 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
88 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
91 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
92 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
93 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
94 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
97 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
99 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
101 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
102 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
104 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
109 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
112 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
114 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
118 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
124 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
126 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
127 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
130 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
133 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
134 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
135 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
138 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
140 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
145 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
150 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
151 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
152 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
153 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
154 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
155 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
156 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
157 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
158 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
163 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
164 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
165 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
168 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 1N6K - GDP AF3 n/a n/a
170 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
171 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
172 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
174 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
175 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
178 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
179 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
181 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
183 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
185 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
186 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
187 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
188 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
189 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
190 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
191 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
192 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
193 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
194 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
197 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
201 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
203 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
207 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
208 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
209 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
210 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
211 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
214 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
215 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
216 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
221 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
225 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
227 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
228 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
229 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
230 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
231 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
232 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
234 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
235 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
236 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
237 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
238 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
239 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
241 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
242 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
243 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
244 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
245 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 GDP 0.839506 0.973684
3 GP3 0.82716 0.948718
4 GTP 0.809524 0.973684
5 GNH 0.807229 0.986842
6 G1R 0.77907 0.961039
7 GCP 0.77907 0.948718
8 GSP 0.770115 0.925
9 5GP 0.756098 0.960526
10 G 0.756098 0.960526
11 G2R 0.747253 0.936709
12 GMV 0.747126 0.948718
13 GAV 0.714286 0.936709
14 GP2 0.712644 0.936709
15 G2P 0.711111 0.936709
16 Y9Z 0.708333 0.880952
17 GDP MG 0.696629 0.9
18 GDD 0.690722 0.936709
19 GDC 0.690722 0.936709
20 GKE 0.690722 0.936709
21 GDP BEF 0.688889 0.878049
22 G5P 0.686869 0.948718
23 GPG 0.684211 0.936709
24 GTG 0.683673 0.91358
25 GFB 0.683673 0.936709
26 GDR 0.683673 0.936709
27 JB2 0.68 0.936709
28 GKD 0.68 0.936709
29 G3A 0.676768 0.948718
30 6CK 0.676768 0.91358
31 GDX 0.673267 0.948718
32 ALF 5GP 0.67033 0.86747
33 GTP MG 0.666667 0.9
34 BEF GDP 0.666667 0.86747
35 YGP 0.663265 0.879518
36 GCP G 0.659574 0.911392
37 GPD 0.656863 0.902439
38 GDP AF3 0.645833 0.86747
39 GDP ALF 0.645833 0.86747
40 JB3 0.641509 0.925
41 DBG 0.640351 0.974359
42 G3D 0.638298 0.960526
43 G4P 0.625 0.960526
44 GMP 0.621951 0.857143
45 NGD 0.62037 0.936709
46 GGM 0.618182 0.925926
47 0O2 0.616162 0.960526
48 G G 0.61 0.911392
49 2MD 0.603604 0.870588
50 CAG 0.60177 0.904762
51 U2G 0.590909 0.91358
52 FEG 0.590909 0.858824
53 GDP 7MG 0.590476 0.888889
54 MGD 0.587719 0.870588
55 ZGP 0.585586 0.848837
56 CG2 0.580357 0.91358
57 ANP 0.568421 0.922078
58 PGD 0.567797 0.902439
59 MD1 0.567797 0.870588
60 3GP 0.56044 0.922078
61 TPG 0.558333 0.822222
62 GH3 0.55 0.948052
63 FE9 0.546219 0.778947
64 GPX 0.539216 0.922078
65 G4M 0.539062 0.860465
66 DGI 0.536082 0.9
67 BGO 0.535088 0.901235
68 IDP 0.53125 0.947368
69 DGT 0.53 0.9
70 2GP 0.526882 0.935065
71 G1R G1R 0.520325 0.901235
72 I2C FE2 CMO CMO 0.516667 0.811111
73 U A G G 0.512605 0.911392
74 AGO 0.504202 0.91358
75 G A A A 0.504202 0.9
76 P2G 0.5 0.860759
77 G1G 0.5 0.902439
78 MGP 0.49505 0.936709
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 DGP 0.474227 0.8875
83 DG 0.474227 0.8875
84 G G U 0.473684 0.911392
85 IMP 0.463918 0.934211
86 G2Q 0.462963 0.936709
87 GPC 0.459677 0.858824
88 G C 0.459016 0.878049
89 GTA 0.448276 0.91358
90 G7M 0.444444 0.924051
91 MAP 0.439252 0.898734
92 G G G RPC 0.435484 0.853659
93 B4P 0.434343 0.871795
94 AP5 0.434343 0.871795
95 ADP 0.434343 0.896104
96 A2D 0.43299 0.871795
97 U G A 0.431655 0.86747
98 G G G C 0.426357 0.890244
99 SGP 0.425743 0.807229
100 AU1 0.425743 0.922078
101 BA3 0.424242 0.871795
102 35G 0.423077 0.909091
103 PCG 0.423077 0.909091
104 A G C C 0.423077 0.888889
105 C2E 0.423077 0.897436
106 APC G U 0.421875 0.864198
107 ATP 0.421569 0.896104
108 ACQ 0.419048 0.873418
109 5GP 5GP 0.419048 0.860759
110 AQP 0.417476 0.896104
111 5FA 0.417476 0.896104
112 01G 0.417391 0.880952
113 UNP 0.415842 0.810127
114 AN2 0.415842 0.909091
115 6AD 0.415094 0.821429
116 ITT 0.411765 0.846154
117 M33 0.411765 0.860759
118 G C C C 0.410448 0.901235
119 G U34 0.408 0.86747
120 ACP 0.407767 0.873418
121 APR 0.403846 0.871795
122 AR6 0.403846 0.871795
123 DG DG 0.403509 0.845238
124 A4P 0.403226 0.848837
125 UCG 0.402985 0.888889
126 AD9 0.4 0.873418
127 SAP 0.4 0.851852
128 AGS 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2Y8E; Ligand: GNP; Similar sites found: 325
This union binding pocket(no: 1) in the query (biounit: 2y8e.bio2) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4M9Q GNP 0.000000000002534 0.73465 None
2 1BH2 GSP 0.0000000002999 0.69751 None
3 2OM2 GDP 0.0000009581 0.57257 None
4 5KUT GDP 0.00000002122 0.52903 None
5 4R98 GNH 0.0000003882 0.49251 None
6 2C04 GCP 0.0001382 0.48909 None
7 1ZUI SKM 0.0006224 0.44946 None
8 1GXU 2HP 0.00135 0.44847 None
9 3W5J GDP 0.0000002065 0.44471 None
10 2OFW ADX 0.001433 0.43796 None
11 2PEZ GGZ 0.001285 0.43234 None
12 2PEZ DAT 0.001285 0.43234 None
13 2BEK ATP 0.001915 0.43148 None
14 1ION ADP 0.0001565 0.41457 None
15 4GOX A3P 0.001334 0.41347 None
16 4TTQ ATP 0.0001074 0.40939 None
17 1SVI GDP 0.0000000007458 0.55102 1.11732
18 3UIE ANP 0.0001172 0.41544 1.11732
19 4D81 ADP 0.000305 0.40859 1.11732
20 2CE7 ADP 0.0002959 0.40014 1.11732
21 1DAK DPU 0.0001365 0.48486 1.67598
22 1DAK ADP 0.008809 0.43501 1.67598
23 1E2K TMC 0.002271 0.43063 1.67598
24 5X40 ACP 0.0006503 0.42503 1.67598
25 3BER AMP 0.02415 0.40117 1.67598
26 1J2J GTP 0.00000000002267 0.75218 1.80723
27 1O3Y GTP 0.00000000003376 0.7051 1.80723
28 1G7S GDP 0.000000001663 0.74321 2.23464
29 3ZS9 ADP ALF 0.00003523 0.48766 2.23464
30 2WOJ ADP ALF 0.00004934 0.48177 2.23464
31 3VX3 ADP 0.0003188 0.4242 2.23464
32 1QAN SAH 0.001318 0.41531 2.23464
33 1W5T ANP 0.001395 0.40229 2.23464
34 2BVN GNP 0.0000000000597 0.63597 2.7933
35 1D8T GDP 0.0000000003682 0.56914 2.7933
36 1V8K ANP 0.0000005723 0.47791 2.7933
37 4IEE AGS 0.001166 0.47198 2.7933
38 4X8O AP5 0.003485 0.42779 2.7933
39 2FAH GDP 0.0001655 0.42425 2.7933
40 2ZR9 DTP 0.00003712 0.41673 2.7933
41 3R7F CP 0.0312 0.40467 2.7933
42 1B7T ADP 0.00003706 0.43447 3.20513
43 1KK8 BEF ADP 0.000009688 0.46666 3.24675
44 1D2E GDP 0.000000008054 0.56362 3.35196
45 2ZFI ADP 0.0000156 0.55902 3.35196
46 3B9Q MLI 0.00005163 0.55093 3.35196
47 1G7C 5GP 0.000000468 0.48851 3.35196
48 3ZQ6 ADP ALF 0.00004045 0.48524 3.35196
49 4IDN GNP 0.0000269 0.47206 3.35196
50 4Q1A 2XZ 0.004729 0.46529 3.35196
51 4Q1A UDP 0.004729 0.46529 3.35196
52 4WOP CTP 0.0001196 0.44293 3.35196
53 3QKT ANP 0.000607 0.43122 3.35196
54 1L2T ATP 0.0007852 0.42685 3.35196
55 4MKG AP5 0.003866 0.42083 3.35196
56 1SVM ATP 0.005926 0.41965 3.35196
57 2Q37 3AL 0.02057 0.41396 3.35196
58 1NHX FTB 0.01166 0.40424 3.35196
59 1F9V ADP 0.00001536 0.40405 3.35196
60 1NHX PEP 0.01376 0.40024 3.35196
61 4LC1 GDP 0.000000009393 0.71811 3.91061
62 4RD0 GDP 0.00000000001264 0.70888 3.91061
63 1TQ4 GDP 0.0000001278 0.6104 3.91061
64 4AG5 ADP 0.00004087 0.5596 3.91061
65 5M04 GDP 0.0000000008412 0.55121 3.91061
66 2B8W ALF 5GP 0.000003402 0.52004 3.91061
67 1F5N GNP 0.000004438 0.51295 3.91061
68 1IWE IMP 0.0005326 0.49572 3.91061
69 3FWY ADP 0.00001464 0.46129 3.91061
70 4XTR ATP 0.0001048 0.45669 3.91061
71 4XVU ATP 0.0001136 0.45543 3.91061
72 4XTR ADP 0.00009403 0.44157 3.91061
73 3H86 AP5 0.000926 0.44095 3.91061
74 2BIF ANP 0.001302 0.43347 3.91061
75 2BIF SIN 0.002328 0.43335 3.91061
76 1X6V ADP 0.001395 0.42652 3.91061
77 1P72 ADP 0.003065 0.41677 3.91061
78 3A4M ADP 0.00001312 0.4124 3.91061
79 2QG6 NMN 0.00484 0.4031 3.91061
80 1QF9 ADP 0.009721 0.40068 4.12371
81 1QF9 ALF 0.009721 0.40068 4.12371
82 1QF9 C5P 0.009721 0.40068 4.12371
83 2C78 GNP 0.00000000002203 0.69953 4.46927
84 2C77 GNP 0.00000000001564 0.69323 4.46927
85 4ZG4 VO4 ADP 0.0000008952 0.53475 4.46927
86 1H65 GDP 0.00001096 0.48843 4.46927
87 1P9B GDP 0.0001856 0.42898 4.46927
88 5I34 GDP 0.00004953 0.4254 4.46927
89 2JLR ANP 0.0003089 0.40921 4.46927
90 2WJG GDP 0.00000000271 0.74478 5.02793
91 2WIC GNP 0.000000005331 0.71881 5.02793
92 4NON GDP 0.0000001541 0.58499 5.02793
93 1SKQ GDP 0.000000002915 0.5357 5.02793
94 2QEN ADP 0.00004069 0.44672 5.02793
95 1FP6 ADP 0.0000627 0.43201 5.02793
96 2RGX AP5 0.002516 0.43088 5.02793
97 1G8S MET 0.01303 0.42442 5.02793
98 1YTM ATP 0.0004977 0.42057 5.02793
99 3BFV ADP 0.00004568 0.41861 5.02793
100 1ZIN AP5 0.004471 0.41815 5.02793
101 4BFW ZVW 0.005281 0.41508 5.02793
102 1FNN ADP 0.0006781 0.40855 5.02793
103 4CVN ADP 0.0000335 0.40484 5.10949
104 2WJH GDP 0.000000004998 0.55845 5.42169
105 2WJH FLC 0.0000004391 0.49912 5.42169
106 3WXM GTP 0.00000000008734 0.70994 5.58659
107 3AB3 GDP 0.00000001223 0.59188 5.58659
108 1JI0 ATP 0.00004095 0.55352 5.58659
109 5I0H ADP BEF 0.0000003793 0.53376 5.58659
110 3ZFD ANP 0.00000004741 0.5296 5.58659
111 1IHU ADP 0.000116 0.45375 5.58659
112 1IHU AF3 0.0001017 0.44985 5.58659
113 3KJI ADP 0.00006836 0.4374 5.58659
114 3FB4 AP5 0.004593 0.41766 5.58659
115 4MKF AP5 0.005366 0.41582 5.58659
116 2QQ0 ANP 0.004975 0.40808 5.58659
117 2QQ0 TMP 0.005668 0.40574 5.58659
118 2ZPA ADP 0.0009917 0.40178 5.58659
119 2YIP YIO 0.03931 0.40157 5.7971
120 3CX8 GSP 0.0000000001009 0.71674 6.14525
121 4BAS GNP 0.0000000001087 0.67403 6.14525
122 1Y3A GDP 0.00000009967 0.57406 6.14525
123 3EC1 GDP 0.000000007794 0.54714 6.14525
124 5L3R GCP 0.000001975 0.52926 6.14525
125 4LPS GDP 0.0000001252 0.50442 6.14525
126 2DPY ADP 0.0005369 0.49541 6.14525
127 1SQ5 ADP 0.00003067 0.42816 6.14525
128 4IOK ADP 0.002261 0.41649 6.14525
129 2QZ4 ADP 0.0001178 0.41478 6.14525
130 4IOK XPO 0.001956 0.41189 6.14525
131 4HSE ADP 0.00009571 0.40874 6.14525
132 1Z6T ADP 0.0006074 0.40308 6.14525
133 1G6O ADP 0.0002829 0.40004 6.14525
134 1SVK ALF GDP 0.0000000002124 0.70643 6.70391
135 4DCT GDP 0.0000000001645 0.59007 6.70391
136 2RCN GDP 0.00000000006076 0.58904 6.70391
137 1GP2 GDP 0.000001077 0.55781 6.70391
138 4P4T GDP 0.0000002005 0.53782 6.70391
139 5KDO GDP 0.0000007284 0.52754 6.70391
140 5KSP GDP 0.0000000634 0.51694 6.70391
141 3A1S GDP 0.000000238 0.51059 6.70391
142 1QF5 GDP 0.0001788 0.48762 6.70391
143 3DEF GDP 0.000002127 0.48406 6.70391
144 1QF5 RPL 0.008915 0.44099 6.70391
145 3DC4 ADP 0.000003371 0.4339 6.70391
146 3QXC ATP 0.001026 0.42875 6.70391
147 4NE2 SH2 0.002537 0.42518 6.70391
148 4NE2 ADP 0.002334 0.42425 6.70391
149 5BQ5 ADP BEF 0.0001692 0.41225 6.70391
150 4KFU ACP 0.000007836 0.4114 6.70391
151 1D2N ANP 0.0009308 0.41 6.70391
152 1OFH ADP 0.0001846 0.40943 6.70391
153 1R6B ADP 0.0001555 0.40805 6.70391
154 2CHG ANP 0.0005747 0.40645 6.70391
155 1XP8 AGS 0.00007326 0.40333 6.70391
156 3MD0 GDP 0.000000002528 0.53304 7.26257
157 3TK1 GDP 0.000000001655 0.52784 7.26257
158 3E70 GDP 0.00001238 0.44838 7.26257
159 1NJF AGS 0.0001177 0.44836 7.26257
160 1NJF ADP 0.0001212 0.43575 7.26257
161 3IIJ ADP 0.00002904 0.41979 7.26257
162 1OS1 PYR 0.003368 0.41237 7.26257
163 1OS1 ATP 0.003372 0.41093 7.26257
164 3COB ADP 0.00000357 0.4094 7.26257
165 5HR5 ADP 0.0004675 0.4075 7.26257
166 3BOS CDP 0.0001069 0.40109 7.26257
167 2QN6 GDP 0.0000000002215 0.56259 7.52688
168 2ODE ALF GDP 0.0000000001008 0.71677 7.80142
169 4NCN GTP 0.000000000002999 0.74313 7.82123
170 1TAD GDP 0.0000000002303 0.70218 7.82123
171 1TAD ALF 0.0000000002303 0.70218 7.82123
172 1FQJ GDP 0.000000008629 0.61416 7.82123
173 1FQK GDP 0.00000001524 0.605 7.82123
174 5HCN GCP 0.000000002511 0.56147 7.82123
175 1GOT GDP 0.0000004866 0.54107 7.82123
176 2XTN GTP 0.000002821 0.51707 7.82123
177 5KSZ GCP 0.0000002016 0.51319 7.82123
178 2VB6 ADP BEF 0.00003713 0.47263 7.82123
179 4PFO ADP 0.0001062 0.46647 7.82123
180 1FQJ ALF 0.00000004908 0.46403 7.82123
181 5L3W GDP 0.00003281 0.44013 7.82123
182 1FQK ALF 0.00000008968 0.43977 7.82123
183 1S3G AP5 0.005469 0.41444 7.82123
184 4ZNL BEF ADP 0.0001903 0.40041 7.82123
185 1F2U ATP 0.0009009 0.43102 8.05369
186 1M7G ADX 0.0005223 0.44698 8.37989
187 1M7G ADP 0.0007791 0.43681 8.37989
188 1M7G AV2 0.00000577 0.43176 8.37989
189 1G3Q ADP 0.00009708 0.41644 8.37989
190 2KIN ADP 0.0000004583 0.41558 8.37989
191 1WF3 GNP 0.0000000004299 0.68533 8.93855
192 1KK1 GNP 0.0000000007952 0.54794 8.93855
193 5CK5 GDP 0.000000004802 0.53095 8.93855
194 5N69 ADP 0.00001922 0.44762 8.93855
195 3RLF ANP 0.0002686 0.4394 8.93855
196 2XTZ GSP 0.00000000005727 0.71728 9.49721
197 1YRB GDP 0.0000000008407 0.59536 9.49721
198 5FG3 GDP 0.00000000003497 0.58212 9.49721
199 5H56 ADP 0.0028 0.41565 9.49721
200 5H56 TYD 0.0028 0.41565 9.49721
201 2XT3 ADP 0.000004236 0.4062 9.49721
202 5GJC ATP 0.000105 0.40244 9.49721
203 2NCD ADP 0.00002086 0.57447 10.0559
204 2Q2Y ADP 0.001293 0.44099 10.0559
205 2Q2Y MKR 0.001446 0.4378 10.0559
206 1LVG ADP 0.000002581 0.42912 10.0559
207 2IXE ATP 0.0005097 0.4238 10.0559
208 1G41 ADP 0.0001766 0.41088 10.0559
209 1GOJ ADP 0.0000009173 0.65865 10.6145
210 4H1V GNP 0.0000009653 0.51054 10.6145
211 3ZIA ADP 0.00007959 0.42961 10.6145
212 3ZIA ATP 0.00004005 0.42653 10.6145
213 1CR1 TTP 0.001075 0.40656 10.6145
214 3P4X ADP 0.00008695 0.40118 10.6145
215 3PQC GDP 0.00000005456 0.52925 11.1732
216 2C9O ADP 0.000485 0.41913 11.7318
217 1K6M AGS 0.001315 0.41364 11.7318
218 5L3S GNP 0.00001034 0.50101 12.2905
219 1RJ9 GCP 0.00009088 0.49362 12.2905
220 5L3V GDP 0.00000574 0.46395 12.2905
221 2IYL GDP 0.000008247 0.44783 12.2905
222 1JWY GDP 0.00000007711 0.53603 12.8492
223 1JWY ADP 0.000009216 0.44395 12.8492
224 1UJ2 C5P 0.003165 0.40904 12.8492
225 1UJ2 ADP 0.003436 0.4076 12.8492
226 4FRZ ADP 0.00001371 0.40479 12.8492
227 3H4S ADP 0.000005147 0.40367 12.8492
228 3QF7 ANP 0.0009398 0.40207 12.8492
229 1W7J ADP BEF 0.000008547 0.54358 13.4078
230 4WZA ACP 0.00005246 0.51981 13.4078
231 4WZA ADP 0.00005381 0.51932 13.4078
232 3FVQ ATP 0.0001818 0.43343 13.4078
233 1IN4 ADP 0.0003294 0.41939 13.4078
234 4O48 ASP 0.02672 0.40889 13.4078
235 2HCJ GDP 0.0000000001017 0.57033 13.5135
236 4HI0 GDP 0.000001084 0.57026 13.9665
237 4BQS ADP 0.0001556 0.50967 16.4773
238 4BQS K2Q 0.005841 0.40883 16.4773
239 1NN5 ANP 0.002171 0.42158 17.8771
240 2Y65 ADP 0.000001424 0.41756 17.8771
241 2VVG ADP 0.000001255 0.40667 17.8771
242 2OFD NGA 0.03022 0.40305 18.3099
243 1AZT GSP 0.0000000001096 0.71528 18.4358
244 1PUJ GNP 0.0000000008446 0.59666 18.4358
245 1BG2 ADP 0.0000003526 0.41759 18.4358
246 1CS4 GSP 0.0000000001305 0.67597 18.9944
247 1XMV ADP 0.00004184 0.42141 19.5531
248 3TMK T5A 0.003181 0.41196 19.5531
249 1DAR GDP 0.000000006959 0.5389 20.6704
250 4OI4 ATP 0.000595 0.42631 20.6704
251 4V0K GDP 0.0000002265 0.56565 22.4852
252 1W0J ADP 0.00003658 0.44034 22.905
253 2V7Q ATP 0.00002165 0.43987 22.905
254 2CK3 ADP 0.0009631 0.41884 22.905
255 2CK3 ANP 0.0006382 0.40995 22.905
256 1W0J ADP BEF 0.000717 0.40814 22.905
257 2V7Q ADP 0.0001059 0.40355 22.905
258 1YZG GDP 0.00000000129 0.56847 23.4637
259 1NRJ GTP 0.0000000003798 0.6467 24.3119
260 1M2O GNP 0.0000000004503 0.68144 26.8156
261 2QTV GNP 0.0000000002674 0.68085 28.7425
262 1ZD9 GDP 0.00000000002352 0.78284 30.1676
263 1R4A GNP 0.00000000001243 0.73263 31.5152
264 1KSH GDP 0.000000000003586 0.71547 32.4022
265 1ZJ6 G3D 0.000000001433 0.567 33.5196
266 1MR3 G3D 0.000000005752 0.55073 33.5196
267 1FZQ GDP 0.0000000004248 0.57185 33.7017
268 2FH5 GTP 0.000000000001543 0.7296 34.6369
269 2HF9 GSP 0.0000001754 0.61968 35.7542
270 2ZEJ GDP 0.000001146 0.54751 35.7542
271 3T12 GDP ALF 0.000000000209 0.66554 36.8715
272 3T1O GDP 0.00000004888 0.53254 36.8715
273 2GJ8 ALF GDP 0.0000000003021 0.69149 37.2093
274 4B47 GDP 0.00000000006555 0.57835 38.5475
275 1UPT GTP 0.00000000001959 0.70132 38.5965
276 1MKY GDP 0.00000000006047 0.58855 39.6648
277 1S9D GDP 0.000000004027 0.72468 40.8537
278 1RE0 GDP 0.0000000004072 0.55786 40.8537
279 1F6B GDP 0.000000008604 0.54603 42.4581
280 2A5F GTP 0.00000000008361 0.70047 42.8571
281 1E96 GTP 0.000000000001179 0.78476 45.8101
282 1OW3 GDP 0.0000000002682 0.62781 46.3687
283 5TAR GDP 0.0000000001941 0.61292 46.3687
284 5TB5 GDP 0.00000000008123 0.6113 46.3687
285 2W2X GSP 0.00000000000144 0.73222 46.9274
286 3REF GDP 0.000000001649 0.63089 46.9274
287 1I4D GDP 0.0000000003926 0.55781 46.9274
288 1HE1 GDP 0.000000005905 0.66815 47.1591
289 1HE1 AF3 0.000006856 0.59387 47.1591
290 2FJU GSP 0.000000000002386 0.72471 47.191
291 1G4U GDP 0.00000001902 0.57121 47.486
292 1DS6 GDP 0.0000000003236 0.57025 47.486
293 1NF3 GNP 0.000000000007615 0.75234 48.0447
294 5HPY GDP 0.0000000002417 0.62895 48.0447
295 1TX4 ALF GDP 0.00000000000556 0.77755 48.5876
296 1CXZ GSP 0.00000000000136 0.74672 48.6034
297 1GRN GDP 0.0000000001699 0.63475 48.6034
298 2NGR GDP 0.00000000002448 0.62101 48.6034
299 4ITR GDP 0.00000002565 0.56702 48.6034
300 4D0N GDP 0.0000000004117 0.56533 48.6034
301 4DID GDP 0.000000002549 0.56057 48.6034
302 2NGR AF3 0.00000001934 0.49134 48.6034
303 1GRN AF3 0.000000107 0.46824 48.6034
304 5XCO GDP 0.00000000002512 0.64704 49.1228
305 5DIF GNP 0.00000000000004163 0.84682 49.7207
306 5UWP GNP 0.00000000000005951 0.84433 49.7207
307 5UWI GNP 0.00000000000004985 0.84368 49.7207
308 4HAT GNP 0.00000000000006306 0.84332 49.7207
309 5UWW GNP 0.00000000000005096 0.84329 49.7207
310 5UWT GNP 0.00000000000005151 0.84307 49.7207
311 5UWR GNP 0.00000000000005285 0.84265 49.7207
312 5UWU GNP 0.00000000000005762 0.84112 49.7207
313 5DI9 GNP 0.00000000000007416 0.84049 49.7207
314 5UWO GNP 0.00000000000006073 0.84022 49.7207
315 5DHF GNP 0.0000000000000665 0.83862 49.7207
316 5UWH GNP 0.00000000000007561 0.83637 49.7207
317 5UWS GNP 0.00000000000009781 0.83561 49.7207
318 1IBR GNP 0.0000000000001363 0.82608 49.7207
319 5UWJ GNP 0.0000000000000413 0.82411 49.7207
320 5UWQ GNP 0.00000000000005007 0.82089 49.7207
321 2G77 GDP 0.00000000001697 0.66555 49.7207
322 3T5G GDP 0.00000000003181 0.62842 49.7207
323 5BXQ GDP 0.0000000005934 0.5774 49.7207
324 3CH5 GDP 0.00000000156 0.56713 49.7207
325 2G77 AF3 0.00000001361 0.48017 49.7207
Pocket No.: 2; Query (leader) PDB : 2Y8E; Ligand: GNP; Similar sites found: 6
This union binding pocket(no: 2) in the query (biounit: 2y8e.bio1) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1XKV ATP 0.0003982 0.40007 5.02793
2 5TSH ANP 0.0001119 0.40085 5.58659
3 4GBM A3P 0.002953 0.40026 5.58659
4 3L8H FX1 0.02332 0.41648 8.37989
5 4U60 SIA 0.04346 0.40126 9.49721
6 1T5C ADP 0.000001884 0.40056 13.4078
Pocket No.: 3; Query (leader) PDB : 2Y8E; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2y8e.bio3) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2Y8E; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2y8e.bio3) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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