Receptor
PDB id Resolution Class Description Source Keywords
2YG3 2 Å EC: 1.4.3.10 STRUCTURE-BASED REDESIGN OF COFACTOR BINDING IN PUTRESCINE OXIDASE: WILD TYPE ENZYME RHODOCOCCUS ERYTHROPOLIS OXIDOREDUCTASE FLAVIN
Ref.: STRUCTURE-BASED REDESIGN OF COFACTOR BINDING IN PUT OXIDASE. BIOCHEMISTRY V. 50 4209 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
FAD A:600;
B:600;
 Valid;
Valid;
 none;
none;
 submit data
785.55 C27 H33 N9 O15 P2 Cc1cc...
GOL A:1451;
A:1453;
A:1455;
B:1452;
B:1453;
 Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
 none;
none;
none;
none;
none;
 submit data
92.094 C3 H8 O3 C(C(C...
SO4 A:1452;
A:1454;
 Invalid;
Invalid;
 none;
none;
 submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2YG3 2 Å EC: 1.4.3.10 STRUCTURE-BASED REDESIGN OF COFACTOR BINDING IN PUTRESCINE OXIDASE: WILD TYPE ENZYME RHODOCOCCUS ERYTHROPOLIS OXIDOREDUCTASE FLAVIN
Ref.: STRUCTURE-BASED REDESIGN OF COFACTOR BINDING IN PUT OXIDASE. BIOCHEMISTRY V. 50 4209 2011
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 2YG4 - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
2 2YG3 - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 2YG4 - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
2 2YG3 - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 2YG4 - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
2 2YG3 - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: FAD; Similar ligands found: 119
No: Ligand ECFP6 Tc MDL keys Tc
1 FAS 1 1
2 FAD 1 1
3 FAY 0.859259 0.9875
4 RFL 0.852941 0.963855
5 6FA 0.794118 0.987654
6 DAL FAD PER 0.772414 0.951807
7 FAE 0.751773 0.987654
8 SFD 0.651007 0.860215
9 FDA 0.641892 0.906977
10 FNK 0.602564 0.876405
11 62F 0.572327 0.939024
12 F2N 0.566265 0.886364
13 FMN 0.543307 0.876543
14 FA9 0.526316 0.939759
15 6YU 0.516304 0.860215
16 CNV FAD 0.511905 0.908046
17 P6G FDA 0.511628 0.908046
18 FAD NBT 0.508876 0.83871
19 A2D 0.504065 0.875
20 P5F 0.491329 0.941176
21 FAD CNX 0.488506 0.8125
22 APR 0.488372 0.851852
23 AR6 0.488372 0.851852
24 AGS 0.484615 0.811765
25 SAP 0.484615 0.811765
26 M33 0.484375 0.864198
27 BA3 0.484127 0.875
28 FAD NBA 0.480663 0.802083
29 ATP 0.48062 0.851852
30 B4P 0.480315 0.875
31 ADP 0.480315 0.851852
32 AP5 0.480315 0.875
33 ANP 0.477273 0.831325
34 AQP 0.476923 0.851852
35 5FA 0.476923 0.851852
36 48N 0.469388 0.902439
37 OAD 0.467626 0.876543
38 GTA 0.465753 0.892857
39 AN2 0.465116 0.841463
40 AD9 0.462121 0.831325
41 3OD 0.460993 0.876543
42 RBF 0.460938 0.790123
43 FB0 0.460606 0.835165
44 139 0.460526 0.858824
45 AP0 0.46 0.835294
46 A22 0.459854 0.864198
47 ACP 0.458015 0.853659
48 8QN 0.456522 0.864198
49 PRX 0.454545 0.831325
50 A1R 0.453237 0.86747
51 G3A 0.452055 0.902439
52 T5A 0.45098 0.872093
53 G5P 0.44898 0.902439
54 ATF 0.448529 0.821429
55 50T 0.44697 0.819277
56 ACQ 0.444444 0.853659
57 PAJ 0.442857 0.847059
58 ADQ 0.442857 0.853659
59 5AL 0.441176 0.864198
60 ADX 0.439394 0.775281
61 CA0 0.439394 0.853659
62 A4P 0.437909 0.831461
63 25L 0.4375 0.864198
64 P33 FDA 0.436464 0.817204
65 5SV 0.435714 0.793103
66 TXE 0.434211 0.890244
67 OMR 0.434211 0.818182
68 ABM 0.434109 0.829268
69 A 0.433071 0.82716
70 AMP 0.433071 0.82716
71 4AD 0.432624 0.855422
72 ADJ 0.432258 0.818182
73 BIS 0.430556 0.802326
74 SRA 0.429688 0.788235
75 AFH 0.42953 0.825581
76 TXD 0.427632 0.890244
77 NXX 0.427632 0.865854
78 UP5 0.427632 0.878049
79 DND 0.427632 0.865854
80 6V0 0.427632 0.857143
81 SRP 0.42446 0.843373
82 PR8 0.423611 0.837209
83 TAT 0.423358 0.821429
84 AMO 0.422535 0.865854
85 PTJ 0.42069 0.835294
86 FYA 0.42069 0.864198
87 TXA 0.42069 0.865854
88 CNA 0.420382 0.865854
89 00A 0.41958 0.823529
90 AHX 0.41958 0.835294
91 MAP 0.41844 0.811765
92 NAI 0.418301 0.845238
93 AU1 0.41791 0.831325
94 AP2 0.416667 0.843373
95 A12 0.416667 0.843373
96 25A 0.415493 0.851852
97 AMP MG 0.415385 0.785714
98 COD 0.415094 0.842697
99 ADP BEF 0.414815 0.77907
100 BEF ADP 0.414815 0.77907
101 4TC 0.412903 0.879518
102 APC 0.411765 0.843373
103 NB8 0.410959 0.835294
104 ME8 0.410959 0.806818
105 1ZZ 0.410959 0.806818
106 4UW 0.409091 0.825581
107 NAX 0.409091 0.837209
108 RBY 0.408759 0.843373
109 ADV 0.408759 0.843373
110 ADP MG 0.407407 0.797619
111 P1H 0.405882 0.818182
112 OOB 0.405594 0.864198
113 A A 0.40411 0.829268
114 LAD 0.40411 0.825581
115 UPA 0.403846 0.86747
116 4UU 0.401316 0.833333
117 A3D 0.401235 0.876543
118 DLL 0.4 0.864198
119 XAH 0.4 0.806818
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2YG3; Ligand: FAD; Similar sites found: 488
This union binding pocket(no: 1) in the query (biounit: 2yg3.bio1) has 41 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2BH9 NAP 0.001759 0.46332 1.10375
2 1EZ4 NAD 0.0002148 0.46905 1.25786
3 1Q1R FAD 0.0000001702 0.54799 1.54525
4 1GQ2 NAP 0.001072 0.43431 1.54525
5 1Z45 NAD 0.001167 0.43003 1.54525
6 4DPL NAP 0.001471 0.42609 1.67131
7 3L9W AMP 0.0000859 0.41678 1.69492
8 5AOA PPI 0.03079 0.40714 1.74825
9 4M38 SAH 0.0004612 0.47378 1.74927
10 4Z24 FAD 0.000000004245 0.59367 1.766
11 3CGB FAD 0.0000001677 0.52533 1.766
12 2WET FAD 0.000004559 0.48894 1.766
13 5JCM FAD 0.000001211 0.53255 1.77384
14 5JCM NAD 0.00000129 0.53255 1.77384
15 5JCM ISD 0.000001373 0.53156 1.77384
16 4XYB NDP 0.001402 0.41669 1.79028
17 2IXB NAD 0.0005179 0.44095 1.8018
18 2IXB A2G 0.001678 0.40486 1.8018
19 1HDG NAD 0.001195 0.44145 1.80723
20 2VHW NAI 0.0001426 0.42501 1.85676
21 2O07 MTA 0.001062 0.43741 1.97368
22 2O07 SPD 0.00149 0.42587 1.97368
23 3GD4 NAD 0.0000004782 0.55585 1.98676
24 3GD4 FAD 0.0000002888 0.5496 1.98676
25 4BV6 FAD 0.0000001176 0.54289 1.98676
26 2RGH FAD 0.0000001672 0.5361 1.98676
27 2RGO FAD 0.0000001969 0.52271 1.98676
28 4AMV F6R 0.02281 0.4089 1.98676
29 2VDV SAM 0.001678 0.46878 2.03252
30 4JNA FAD 0.00000002931 0.56506 2.05882
31 1R6D NAD 0.002212 0.4077 2.07715
32 1R6D DAU 0.00259 0.40447 2.07715
33 1XFF GLU 0.04094 0.40252 2.08333
34 2I7C AAT 0.003201 0.40569 2.12014
35 3Q9T FAY 0.000000416 0.5165 2.20751
36 1M2W NAD 0.008666 0.41062 2.20751
37 1TV5 N8E 0.04386 0.41009 2.20751
38 1B1C FMN 0.01014 0.41943 2.20994
39 2DVZ GLU 0.03109 0.41223 2.2293
40 3B1J NAD 0.0009456 0.43362 2.35988
41 2DT5 NAD 0.00005641 0.48531 2.36967
42 3KU0 ADE 0.03978 0.4163 2.39044
43 4QTU SAM 0.001078 0.46102 2.40385
44 5VN0 FAD 0.0000005253 0.5268 2.42826
45 5VN0 NAI 0.000008831 0.41831 2.42826
46 5M67 NAD 0.0009411 0.41727 2.42826
47 5M67 ADE 0.0009758 0.41673 2.42826
48 5M67 3D1 0.0009908 0.4165 2.42826
49 1IM8 SAI 0.003539 0.43392 2.45902
50 4IQY AR6 0.006725 0.41542 2.5
51 4JZ8 CIT 0.04601 0.40996 2.52366
52 3WQD PLP 999 0.0104 0.42218 2.5641
53 5H81 NAP 0.0004091 0.4721 2.57069
54 1NYT NAP 0.00245 0.42837 2.58303
55 1OC2 TDX 0.001107 0.41997 2.58621
56 1OC2 NAD 0.001107 0.41997 2.58621
57 3VYW SAM 0.0006635 0.46666 2.5974
58 1E1M FAD 0.0000002342 0.54805 2.64901
59 5MZI FYK 0.00000179 0.52339 2.64901
60 5MZI FAD 0.000001674 0.52339 2.64901
61 1E1M NAP 0.0000002342 0.47582 2.64901
62 5JJR SAH 0.005067 0.43356 2.64901
63 1OBB NAD 0.00838 0.40854 2.64901
64 2PV7 NAD 0.0001206 0.4757 2.68456
65 1Z82 NDP 0.00118 0.43556 2.68657
66 1JQ3 AAT 0.000636 0.43199 2.7027
67 3ABI NAD 0.0002014 0.45998 2.73973
68 2NXE SAM 0.0008609 0.4696 2.75591
69 1WP4 NDP 0.0001623 0.40071 2.76817
70 1KEW NAD 0.002699 0.40301 2.77008
71 3OJO NAD 0.000003212 0.42798 2.78422
72 1ELI PYC 0.000005173 0.47963 2.82776
73 2I3G NAP 0.0005482 0.43999 2.84091
74 1BZL FAD 0.0000006342 0.56492 2.86976
75 3ICS FAD 0.00000003925 0.54977 2.86976
76 3ICR FAD 0.00000005816 0.53987 2.86976
77 3ICT FAD 0.00000006263 0.53954 2.86976
78 1O0S NAI 0.0006201 0.4604 2.86976
79 2Q1S NAI 0.0004779 0.4225 2.86976
80 3ICT ADP 0.00000009185 0.4113 2.86976
81 3ICS ADP 0.0000001251 0.40992 2.86976
82 2FR1 NDP 0.003672 0.40573 2.88066
83 4NTD FAD 0.00000005379 0.54505 2.94118
84 2A8Y MTA 0.01657 0.40643 2.96296
85 5EVY FAD 0.0007272 0.45739 2.96804
86 1I2L DCS 0.02223 0.40052 2.97398
87 2Q1W NAD 0.0002733 0.44866 3.003
88 3BAZ NAP 0.002069 0.43145 3.003
89 3E3U NVC 0.02555 0.4097 3.04569
90 1JJ7 ADP 0.03404 0.41991 3.07692
91 5HSA FAS 0.0000001095 0.54395 3.09051
92 2XVF FAD 0.0000001017 0.53173 3.09051
93 2V3A FAD 0.0000004968 0.51351 3.125
94 1A5Z NAD 0.00002178 0.40415 3.1348
95 1KPG SAH 0.00913 0.41243 3.13589
96 3OA2 NAD 0.002908 0.41702 3.14465
97 2FK8 SAM 0.01216 0.4097 3.14465
98 3G5S FAD 0.0000002546 0.51882 3.16027
99 1E3I CXF 0.002546 0.40273 3.19149
100 3G89 SAM 0.0003011 0.50591 3.21285
101 1DLJ NAI 0.0004058 0.43096 3.23383
102 1DLJ UGA 0.001154 0.41508 3.23383
103 1UXG NAD 0.0002847 0.42146 3.23625
104 5O4J SAH 0.0005276 0.40365 3.28467
105 5O4J 9KH 0.0005276 0.40365 3.28467
106 1J49 NAD 0.00007994 0.41105 3.3033
107 4MIG G3F 0.00000007441 0.56024 3.31126
108 1KNR FAD 0.00000006822 0.54926 3.31126
109 2C7G FAD 0.0000002855 0.54744 3.31126
110 2C7G ODP 0.0000002694 0.54713 3.31126
111 4HA6 FAD 0.00000003043 0.54384 3.31126
112 2XVE FAD 0.0000006645 0.53885 3.31126
113 3B9Q MLI 0.000963 0.48293 3.31126
114 2JJQ SAH 0.004282 0.44852 3.31126
115 1V8B NAD 0.0003634 0.41302 3.31126
116 4XQC 13D 0.001468 0.40679 3.31126
117 9LDB NAD 0.0002373 0.40451 3.31325
118 9LDT NAD 0.0002465 0.40396 3.31325
119 4K5S FAD 0.0000001993 0.50531 3.35821
120 4K5S PM0 0.00000318 0.5034 3.35821
121 3KLJ FAD 0.00000001839 0.53944 3.37662
122 3BBH SFG 0.02785 0.4016 3.41463
123 2X3N FAD 0.000001815 0.49146 3.50877
124 4ZRN NAD 0.001202 0.41915 3.52564
125 3QVP FAD 0.00000001768 0.57421 3.53201
126 2NVK FAD 0.00000001434 0.57393 3.53201
127 1Y8Q ATP 0.000004719 0.54716 3.53201
128 3NTA FAD 0.000000373 0.53198 3.53201
129 2DKH 3HB 0.0000002147 0.52892 3.53201
130 3NT6 FAD 0.000000297 0.52103 3.53201
131 3NTD FAD 0.0000003509 0.51836 3.53201
132 2DKH FAD 0.0000001313 0.51237 3.53201
133 4UOX PLP 0.02823 0.41087 3.53201
134 1N4W FAD 0.000000189 0.53898 3.57143
135 3HAD NAD 0.001574 0.40949 3.57143
136 1V6A TRE 0.002699 0.48035 3.61446
137 1HKU NAD 0.0002838 0.45104 3.63128
138 4EA7 JB2 0.001492 0.40246 3.63636
139 1YQZ FAD 0.0000009434 0.53232 3.65297
140 3NYC FAD 0.00000007222 0.49832 3.67454
141 3NYC IAR 0.00000007222 0.49832 3.67454
142 3A27 SAM 0.001272 0.46167 3.67647
143 2BRY FAD 0.0000001488 0.50917 3.75276
144 4TXI FAD 0.0000001258 0.50681 3.75276
145 1UGX GAL MGC 0.04807 0.40568 3.7594
146 1XHC FAD 0.00000002493 0.54766 3.81471
147 1MUU NAD 0.00006961 0.4932 3.89908
148 1MV8 NAD 0.0000452 0.41127 3.89908
149 1I0Z NAI 0.000358 0.45017 3.9039
150 4KOA NDP 0.00467 0.43883 3.9039
151 1DSS NAD 0.0000658 0.40382 3.9039
152 4YNU FAD 0.00000003111 0.5674 3.97351
153 4YNU LGC 0.00000005418 0.56504 3.97351
154 4G74 FAD 0.000001556 0.51783 3.97351
155 4G74 UQ5 0.000005458 0.45845 3.97351
156 2CDU FAD 0.0000002442 0.51658 3.9823
157 2CDU ADP 0.00000005579 0.44376 3.9823
158 2QA1 FAD 0.0000000314 0.58331 4
159 1XDS SAM 0.01398 0.42285 4.01069
160 3ZNN FAD 0.0000003203 0.54684 4.03458
161 3ZNN 4WL 0.0000003203 0.54684 4.03458
162 3WGT QSC 0.0000003632 0.53625 4.03458
163 3WGT FAD 0.0000003549 0.53526 4.03458
164 4YCA NDP 0.000031 0.50369 4.08163
165 3OU2 SAH 0.00354 0.42166 4.12844
166 2BKX F6R 0.008596 0.43342 4.13223
167 1FS5 TLA 0.008783 0.42923 4.13534
168 3RNM FAD 0.000000002194 0.60523 4.19426
169 1MO9 FAD 0.0000000316 0.60337 4.19426
170 1MO9 KPC 0.00000003771 0.60144 4.19426
171 2F5Z FAD 0.000000003465 0.59844 4.19426
172 1ZMD NAI 0.0000004641 0.58438 4.19426
173 1ZMD FAD 0.000000002717 0.57748 4.19426
174 3GDN HBX 0.0000001492 0.55239 4.19426
175 3GDN FAD 0.00000007559 0.55103 4.19426
176 1NAA 6FA 0.00000003301 0.54276 4.19426
177 1NAA ABL 0.00000007485 0.49026 4.19426
178 5UAO FAD 0.00001392 0.46535 4.19426
179 5KMS FAD 0.000002031 0.48684 4.19753
180 5KMS NAD 0.00003957 0.47327 4.19753
181 3DMH SAM 0.002432 0.44126 4.19948
182 3DMH GMP 0.005226 0.40933 4.19948
183 2JHF NAD 0.01703 0.40595 4.27807
184 4OBW SAM 0.02234 0.40325 4.28016
185 4AG5 ADP 0.01437 0.44013 4.33673
186 3GMB FAD 0.000006498 0.46271 4.33735
187 2GND MAN 0.01302 0.43953 4.36508
188 1Q8Q MAN MMA 0.01416 0.43946 4.36508
189 1Q8S MAN MMA 0.01691 0.43426 4.36508
190 2PHR MAN MAN BMA MAN 0.04045 0.40977 4.36508
191 1Q9I TEO 0.00000007289 0.56974 4.37828
192 1Q9I FAD 0.00000007289 0.47991 4.37828
193 1LLU NAD 0.00321 0.40341 4.38596
194 1LTH NAD 0.00007369 0.40205 4.38871
195 3SQP FAD 0.0000003452 0.60374 4.39331
196 5BVA FAD 0.00000001221 0.58135 4.40098
197 2RAB NAD 0.00000002384 0.59658 4.41501
198 2RAB FAD 0.000000004529 0.59616 4.41501
199 4M52 FAD 0.000000006094 0.58832 4.41501
200 2A8X FAD 0.000000008728 0.5614 4.41501
201 2R4J 13P 0.0000001393 0.55474 4.41501
202 2R4J FAD 0.0000001393 0.48756 4.41501
203 3IHG FAD 0.0000005352 0.47625 4.41501
204 1LDN NAD 0.00009087 0.41765 4.43038
205 2F5X ASP 0.02678 0.42356 4.48718
206 1KOL NAD 0.0002892 0.41528 4.52261
207 3OZ2 FAD 0.000000007783 0.58115 4.53401
208 4J36 FAD 0.0000006117 0.49076 4.57831
209 4J36 1HR 0.000006578 0.48621 4.57831
210 4JK3 NAD 0.00002093 0.42147 4.6332
211 4J4H NAI 0.001065 0.41353 4.6332
212 4J4H 1J1 0.001065 0.41353 4.6332
213 2E5V FAD 0.0000001769 0.53997 4.63576
214 5JE8 NAD 0.0001576 0.47833 4.63576
215 1QMG APX 0.01257 0.40358 4.63576
216 1BW9 NAD 0.0003815 0.47344 4.77528
217 4YSX FAD 0.00000003514 0.55901 4.78723
218 1C1X NAD 0.0002771 0.4645 4.78873
219 2B9I ADP 0.01084 0.42133 4.81586
220 4E5N NAD 0.0001808 0.40846 4.84848
221 1V59 FAD 0.000000002344 0.60768 4.85651
222 1PN0 FAD 0.0000004202 0.53271 4.85651
223 1PN0 IPH 0.0000004588 0.53271 4.85651
224 2V6O FAD 0.0000003693 0.42314 4.85651
225 1V59 NAD 0.00000003652 0.42188 4.85651
226 4CNK FAD 0.00000002185 0.55824 4.85933
227 3F8D FAD 0.00000002587 0.59962 4.95356
228 1E3W NAD 0.003169 0.413 4.98084
229 1M0S CIT 0.00847 0.44632 5.02283
230 3WV8 ATP 0.0000137 0.40723 5.04587
231 1LVL NAD 0.0000002599 0.62001 5.07726
232 5JCA FAD 0.00000001384 0.57618 5.07726
233 4JDR FAD 0.00000001774 0.5629 5.07726
234 5JCA NDP 0.0000001576 0.56242 5.07726
235 1LVL FAD 0.00000001346 0.55509 5.07726
236 3UCL FAD 0.000001578 0.52937 5.07726
237 3UCL CYH 0.000001578 0.52937 5.07726
238 3UCL NAP 0.000001887 0.52937 5.07726
239 3GGO NAI 0.001479 0.40365 5.09554
240 3GGO ENO 0.001479 0.40365 5.09554
241 1XCL SAH 0.003485 0.40659 5.10638
242 1WDK NAD 0.0000373 0.40213 5.12821
243 3VPH OXM 0.0003012 0.41212 5.16129
244 3VPH NAD 0.0002703 0.4072 5.16129
245 5JWC FAD 0.0000005467 0.50318 5.18234
246 4K28 NAD 0.0001204 0.48322 5.20446
247 1RYI FAD 0.0000001047 0.5446 5.2356
248 1RYI GOA 0.0009983 0.44271 5.2356
249 1GPE FAD 0.00000001408 0.58084 5.29801
250 4YRY FAD 0.00000001349 0.57655 5.29801
251 4YRY NAD 0.0000001344 0.55656 5.29801
252 5EB4 FAD 0.00000006743 0.54944 5.29801
253 5J7X FAD 0.0000001744 0.52815 5.29801
254 1COY FAD 0.0000003417 0.52044 5.29801
255 1DJN ADP 0.00000001165 0.49756 5.29801
256 1COY AND 0.000002101 0.4423 5.29801
257 3JQA NAP 0.004334 0.41263 5.29801
258 5JCJ NAP 0.003753 0.4126 5.29801
259 3BMO NAP 0.00392 0.41184 5.29801
260 4CMI NAP 0.003944 0.41174 5.29801
261 4CM4 NAP 0.003951 0.41171 5.29801
262 3JQB NAP 0.004594 0.41161 5.29801
263 3JQG NAP 0.004771 0.41094 5.29801
264 3BMQ NAP 0.003809 0.40986 5.29801
265 3JQF NAP 0.004018 0.40895 5.29801
266 4NEC SAH 0.01814 0.41379 5.30303
267 2NSJ C2R 0.02157 0.41689 5.32544
268 3GDH SAH 0.002771 0.42908 5.39419
269 1DXY NAD 0.00005203 0.40952 5.40541
270 5EOW FAD 0.00000117 0.48673 5.4321
271 2VYN NAD 0.000109 0.40734 5.43807
272 4O0L NDP 0.002753 0.4129 5.45455
273 2RGJ FAD 0.000000402 0.49705 5.47264
274 3AXB FAD 0.000000006977 0.59695 5.51876
275 1QO8 FAD 0.000000006231 0.58799 5.51876
276 5U8U FAD 0.00000007087 0.57828 5.51876
277 3E1T FAD 0.00000002557 0.56872 5.51876
278 2WPF WPF 0.000000823 0.562 5.51876
279 2WPF FAD 0.0000009328 0.5578 5.51876
280 3AXB PRO 0.00000001985 0.55528 5.51876
281 1GTE FAD 0.0000004259 0.44827 5.51876
282 3LXD FAD 0.00000007659 0.52941 5.54217
283 2HMT NAI 0.00001651 0.40853 5.55556
284 1H2B NAJ 0.0006844 0.4308 5.57103
285 3V1Y NAD 0.0001901 0.47124 5.63798
286 2EG5 SAH 0.009475 0.4313 5.64516
287 4REP FAD 0.0000000001376 0.63605 5.65657
288 3FG2 FAD 0.00000009494 0.5185 5.69307
289 2G5C NAD 0.0001334 0.4111 5.69395
290 5FJN FAD 0.00000005199 0.55657 5.70175
291 5FJN BE2 0.00000007114 0.55657 5.70175
292 3LAD FAD 0.000000005402 0.5901 5.73951
293 5BUK FAD 0.00000001021 0.58402 5.77778
294 4USQ FAD 0.0000000852 0.52302 5.81717
295 5AYV KPL 0.0006129 0.40192 5.82524
296 4D7E FAD 0.000003044 0.48095 5.82751
297 1G55 SAH 0.01317 0.41103 5.8309
298 2YVF NAD 0.000002065 0.52218 5.88235
299 2YVF FAD 0.000001935 0.52218 5.88235
300 3GF4 FAD 0.00000003837 0.49475 5.89744
301 3GF4 UPG 0.00000002983 0.48595 5.89744
302 4RDH AMP 0.00001352 0.5663 5.90278
303 5J60 FAD 0.000000003867 0.59143 5.9375
304 1FEC FAD 0.000000135 0.54842 5.96026
305 4EIP K2C 0.000001782 0.50964 5.96026
306 4EIP FAD 0.000001782 0.50964 5.96026
307 3OND ADN 0.001033 0.41493 5.96026
308 5HJM MTA 0.006406 0.42546 5.96591
309 4NTC FAD 0.00000001681 0.57159 5.97015
310 3GFB NAD 0.0007592 0.44332 6
311 3LST SAH 0.0254 0.40983 6.03448
312 2NPX FAD 0.0000006431 0.52761 6.04027
313 2NPX NAD 0.000003273 0.43126 6.04027
314 3HDY FAD 0.0000003575 0.54961 6.04534
315 3HDY FDA 0.0000004039 0.5477 6.04534
316 3HDY GDU 0.0000004324 0.5477 6.04534
317 5EZ7 FAD 0.00000007008 0.54534 6.12245
318 5TUK FAD 0.00001899 0.42851 6.12745
319 1PS9 FAD 0.000000004188 0.59209 6.18102
320 3UOY FAD 0.00000009605 0.57562 6.18102
321 3UOY NAP 0.00000009605 0.57562 6.18102
322 4AP3 FAD 0.0000002256 0.5557 6.18102
323 4AP3 NAP 0.0000002256 0.5557 6.18102
324 1ZK7 FAD 0.000000009133 0.54989 6.18102
325 3CGD FAD 0.0000011 0.54504 6.18102
326 3CGD NAD 0.0000011 0.54504 6.18102
327 3CGD COA 0.0000011 0.54504 6.18102
328 3G2O SAM 0.002359 0.44912 6.18102
329 1KYQ NAD 0.00001109 0.4 6.20438
330 4MO2 FDA 0.00000002628 0.57662 6.25
331 4MO2 FAD 0.00000002345 0.57378 6.25
332 2HQM FAD 0.000000002716 0.60028 6.26305
333 1KEV NDP 0.002289 0.40883 6.26781
334 5DXA SFG 0.002724 0.43249 6.30372
335 3LU1 NAD 0.003358 0.41201 6.31868
336 1C0I FAD 0.007883 0.41012 6.33609
337 1C0I BE2 0.007883 0.41012 6.33609
338 2B4R NAD 0.0002794 0.40228 6.37681
339 4D04 FAD 0.0000002408 0.55688 6.40177
340 4D04 NAP 0.0000002408 0.55688 6.40177
341 1VQW FAD 0.00000004393 0.52602 6.40177
342 3WMX NAD 0.006195 0.40885 6.42458
343 3QJ4 FAD 0.000000000000644 0.73248 6.43275
344 2GV8 FAD 0.00000001666 0.59836 6.4877
345 2GVC FAD 0.00000001216 0.5433 6.4877
346 2GV8 NDP 0.0009768 0.44841 6.4877
347 4RPL FAD 0.00000003773 0.58709 6.51629
348 4RPL 3UC 0.0000000497 0.58606 6.51629
349 3CTY FAD 0.000000000808 0.62188 6.58307
350 4BJZ P3A 0.00007023 0.47347 6.60377
351 4BJZ FAD 0.02297 0.40662 6.60377
352 2IVD FAD 0.0000000000427 0.68119 6.62252
353 1D4D FAD 0.000000008244 0.58555 6.62252
354 2AQJ FAD 0.000007709 0.49964 6.62252
355 2AQJ TRP 0.00001557 0.48774 6.62252
356 1UWK NAD 0.001247 0.4102 6.62252
357 1UWK URO 0.001247 0.4102 6.62252
358 1NVM NAD 0.0005099 0.44121 6.66667
359 5N53 8NB 0.01715 0.43369 6.66667
360 2Y6Q FAD 0.0000003106 0.49518 6.78392
361 2Y6Q I7T 0.000004681 0.49512 6.78392
362 1I8T FAD 0.00000001833 0.56488 6.81199
363 2GMH FAD 0.00000003561 0.55264 6.84327
364 4C3Y FAD 0.000000259 0.53125 6.84327
365 4C3Y ANB 0.0000009498 0.5191 6.84327
366 5BR7 FAD 0.00000002789 0.58951 6.87023
367 5BR7 FLC 0.0000001514 0.56305 6.87023
368 3QFA FAD 0.00000001213 0.56268 6.89655
369 3B1F NAD 0.000009172 0.41413 6.89655
370 4USR FAD 0.0000001545 0.51003 6.92521
371 1NPD NAD 0.001938 0.43572 6.94444
372 1LDM NAD 0.0005371 0.44326 6.99088
373 4EMI NAD 0.0000004409 0.54525 7.07317
374 4EMI FAD 0.00000006658 0.54219 7.07317
375 2Q0L FAD 0.000000006245 0.57777 7.07396
376 2Q0L NAP 0.00002628 0.55225 7.07396
377 4YUW S4M 0.01086 0.40475 7.23684
378 4YUW 4JU 0.01207 0.40339 7.23684
379 4H2D FMN 0.02602 0.40011 7.27273
380 1GET NAP 0.000000004458 0.62541 7.28477
381 1GET FAD 0.00000000387 0.62532 7.28477
382 1VDC FAD 0.000000007879 0.59269 7.28477
383 4UP3 FAD 0.000000007023 0.58266 7.32484
384 2AHR NAP 0.002568 0.41659 7.33591
385 2YVJ FAD 0.0000004698 0.51023 7.33945
386 2YVJ NAI 0.0000002963 0.43202 7.33945
387 3TLJ SAH 0.009382 0.40912 7.5067
388 3LZW NAP 0.0000001924 0.5559 7.53012
389 3LZW FAD 0.00000003303 0.55186 7.53012
390 3JV7 NAD 0.001014 0.43244 7.53623
391 1CER NAD 0.0004262 0.45679 7.55287
392 1TDF FAD 0.000000007022 0.59286 7.59494
393 1TDF NAP 0.00000005186 0.58852 7.59494
394 4X9M FAD 0.0000001142 0.5417 7.6555
395 2Q7V FAD 0.0000000003157 0.6205 7.69231
396 2Z3Y F2N 0.000000000000006883 0.79358 7.72627
397 4AT0 FAD 0.0000008576 0.52195 7.94702
398 1O94 ADP 0.00000001442 0.65438 7.95455
399 3S5W FAD 0.0000007794 0.47896 7.99136
400 4RSL FAD 0.000002321 0.4855 8.08989
401 2ZXI FAD 0.000001665 0.51303 8.16777
402 5MQ6 NDP 0.00004332 0.51055 8.16777
403 2CUL FAD 0.0000001213 0.52151 8.18966
404 3T31 FAD 0.000003955 0.50582 8.23799
405 3T31 DCQ 0.000004541 0.50582 8.23799
406 3AYI HCI 0.000000000007628 0.70646 8.38852
407 3AYI FAD 0.000000000006804 0.70646 8.38852
408 4MOP 2H5 0.00000009499 0.56059 8.38852
409 4EMJ FAD 0.00000008814 0.54191 8.41121
410 3CIF NAD 0.0001554 0.40365 8.6351
411 1FL2 FAD 0.000000003452 0.58906 8.70968
412 2B9W FAD 0.0000000002624 0.65529 8.72641
413 5BXV MGP 0.03709 0.41752 8.85417
414 3ITJ FAD 0.00000002067 0.57963 8.87574
415 3U31 NAD 0.007655 0.41582 8.96552
416 5UAV TFB 0.0001013 0.43031 9.00621
417 5UAV NDP 0.0001013 0.43031 9.00621
418 3FPZ AHZ 0.0018 0.45554 9.20245
419 4ZCC NAI 0.000000000003382 0.71533 9.22619
420 4ZCC FAD 0.000000000003382 0.71533 9.22619
421 1XXR MAN 0.02448 0.42631 9.31677
422 1JG3 ADN 0.0002519 0.49457 9.3617
423 3WE0 FAD 0.000000000009779 0.68571 9.49227
424 3FZG SAM 0.02405 0.40776 9.5
425 5I39 FAD 0.00000009446 0.53685 9.55882
426 3EGI ADP 0.003849 0.46984 9.70874
427 4IV9 FAD 0.000000000002764 0.69783 9.71302
428 5WGR FAD 0.0000001828 0.53479 9.71302
429 5TUF FAD 0.000002569 0.52573 9.77995
430 5TUF TDC 0.00001808 0.41044 9.77995
431 3NKS FAD 0.00000000002048 0.68633 10.1545
432 1E6E FAD 0.000000019 0.55228 10.1562
433 3EGV SAH 0.001084 0.46913 10.2041
434 3OFK SAH 0.0005921 0.465 10.6481
435 2V3B FAD 0.0000008172 0.50272 10.9091
436 2GAG NAD 0.000000004624 0.57622 11.1111
437 2GAG FAD 0.0000002818 0.53595 11.1111
438 2GAG FOA 0.0000003767 0.53161 11.1111
439 1JNR FAD 0.0000001455 0.57496 11.3333
440 3NJ4 NAD 0.004184 0.42581 11.4943
441 3NJ4 AFX 0.009663 0.41152 11.4943
442 4OPC PGT 0.0000004944 0.57462 11.6998
443 4OPC FDA 0.0000003694 0.57462 11.6998
444 2HJR APR 0.0002093 0.48087 12.5
445 2F1K NAP 0.00004171 0.49838 12.9032
446 1YKJ FAD 0.00001341 0.49383 12.9442
447 1YKJ PHB 0.00001341 0.49383 12.9442
448 4DSG UDP 0.00000001321 0.59997 13.0243
449 4DSG FAD 0.00000001321 0.59997 13.0243
450 3AD8 NAD 0.000000001121 0.58168 13.3005
451 3AD8 PYC 0.00000103 0.53707 13.3005
452 3AD8 FAD 0.00000103 0.53707 13.3005
453 5ODQ FAD 0.00000008056 0.55009 13.5714
454 1RP0 AHZ 0.0000001117 0.50749 13.7324
455 1INN MET 0.04736 0.40881 13.8554
456 4II2 ATP 0.000006767 0.41177 14.3488
457 4J56 FAD 0.000000004384 0.59664 14.9123
458 1HYH NAD 0.00009371 0.46962 15.534
459 4TM3 FAD 0.00002042 0.49155 15.5756
460 4U8P FDA 0.000000005834 0.47572 15.6733
461 4U8P UDP 0.000000006731 0.46803 15.6733
462 1J0X NAD 0.0008913 0.41323 16.5663
463 5E8J SAH 0.0006759 0.48844 18.1818
464 3AB1 FAD 0.00000002381 0.56473 18.3333
465 2VOH CIT 0.03575 0.40017 19.2308
466 1LSS NAD 0.00001636 0.40371 23.5714
467 5G3U FDA 0.0000000000004968 0.71207 26.2411
468 5G3U ITW 0.000000000005114 0.69743 26.2411
469 1YY5 FAD 0.00000000000000433 0.80288 26.7108
470 1RSG FAD 0.00000000000001099 0.78424 26.7108
471 5TTJ FAD 0.000000000000003442 0.78953 38.1898
472 5MBX FAD 0.0000000000002359 0.76163 38.1898
473 5MBX SP5 0.0000000000002359 0.76163 38.1898
474 2JB2 FAD 0.0000000000005301 0.72867 40.0818
475 2JB2 PHE 0.0000000000007704 0.7166 40.0818
476 2VVL FAD 7.772e-16 0.80771 41.0596
477 2VVM FAD 4.286e-16 0.82669 41.2804
478 2IID PHE 0.00000000000466 0.59841 42.3841
479 2IID FAD 0.00000000000466 0.59841 42.3841
480 3K7M FAD 0.00000000000006029 0.6544 43.1555
481 4GUS FAD 7.772e-16 0.82859 43.2671
482 4GUT FAD 0.00000000000000111 0.82848 43.2671
483 4FWE FAD 8.882e-16 0.82358 43.2671
484 4HSU FAD 0.000000000000002442 0.81137 43.2671
485 1REO FAD 0.0000000000009643 0.70785 43.4879
486 5TS5 FAD 0.0000000000004045 0.71674 43.7086
487 1H82 FAD 0.0000000000000544 0.78609 43.9294
488 1H82 GZZ 0.00000000000009714 0.78609 43.9294
Pocket No.: 2; Query (leader) PDB : 2YG3; Ligand: FAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2yg3.bio1) has 41 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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