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Receptor
PDB id Resolution Class Description Source Keywords
2YX1 2.2 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF M.JANNASCHII TRNA M1G37 METHYLTRANSFERA METHANOCALDOCOCCUS JANNASCHII METHYL TRANSFERASE TRNA MODIFICATION ENZYME TRANSFERASE
Ref.: CRYSTAL STRUCTURE OF ARCHAEAL TRNA(M(1)G37)METHYLTR ATRM5. PROTEINS V. 72 1274 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SFG A:401;
B:402;
Valid;
Valid;
none;
none;
submit data
381.387 C15 H23 N7 O5 c1nc(...
ZN A:501;
A:502;
A:503;
A:504;
B:505;
B:506;
B:507;
B:508;
B:509;
B:510;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2YX1 2.2 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF M.JANNASCHII TRNA M1G37 METHYLTRANSFERA METHANOCALDOCOCCUS JANNASCHII METHYL TRANSFERASE TRNA MODIFICATION ENZYME TRANSFERASE
Ref.: CRYSTAL STRUCTURE OF ARCHAEAL TRNA(M(1)G37)METHYLTR ATRM5. PROTEINS V. 72 1274 2008
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 2YX1 - SFG C15 H23 N7 O5 c1nc(c2c(n....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 2YX1 - SFG C15 H23 N7 O5 c1nc(c2c(n....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 2YX1 - SFG C15 H23 N7 O5 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SFG; Similar ligands found: 231
No: Ligand ECFP6 Tc MDL keys Tc
1 SFG 1 1
2 0UM 0.689655 0.887324
3 SAI 0.654762 0.940298
4 SA8 0.642857 0.9
5 SAH 0.635294 0.954545
6 EEM 0.62069 0.875
7 5X8 0.619048 0.924242
8 S7M 0.606742 0.875
9 ADN 0.597222 0.850746
10 RAB 0.597222 0.850746
11 XYA 0.597222 0.850746
12 5CD 0.594595 0.863636
13 5N5 0.581081 0.850746
14 62X 0.574468 0.84
15 A4D 0.573333 0.850746
16 K15 0.568421 0.863014
17 DTA 0.564103 0.84058
18 6RE 0.560976 0.833333
19 SAM 0.555556 0.875
20 EP4 0.551282 0.802817
21 KB1 0.55102 0.887324
22 M2T 0.544304 0.780822
23 SMM 0.537634 0.84
24 MTA 0.5375 0.826087
25 AMP 0.53012 0.77027
26 A 0.53012 0.77027
27 ZAS 0.53012 0.816901
28 LMS 0.53012 0.678571
29 J7C 0.529412 0.84507
30 3DH 0.52439 0.826087
31 GJV 0.523256 0.821918
32 SON 0.522727 0.813333
33 0XU 0.522222 0.938462
34 SRP 0.521277 0.813333
35 SSA 0.521277 0.697674
36 AOC 0.517647 0.826087
37 CA0 0.516854 0.776316
38 5AL 0.516129 0.786667
39 DSZ 0.515464 0.717647
40 AMO 0.515464 0.813333
41 GSU 0.515152 0.738095
42 KH3 0.514286 0.851351
43 ABM 0.511628 0.75
44 A2D 0.511628 0.75
45 A3N 0.511628 0.814286
46 A5A 0.510638 0.682353
47 5CA 0.510417 0.697674
48 SRA 0.505882 0.730769
49 S4M 0.505747 0.792208
50 A3S 0.505618 0.895522
51 A7D 0.505618 0.882353
52 AN2 0.505618 0.74026
53 GAP 0.505376 0.776316
54 54H 0.5 0.666667
55 M33 0.5 0.74026
56 LAD 0.5 0.818182
57 A12 0.5 0.766234
58 ADX 0.5 0.678571
59 Y3J 0.5 0.80303
60 DSH 0.5 0.871429
61 LSS 0.5 0.681818
62 KAA 0.5 0.712644
63 VMS 0.5 0.666667
64 AP2 0.5 0.766234
65 BA3 0.5 0.75
66 SXZ 0.49505 0.875
67 ME8 0.49505 0.775
68 AHX 0.494949 0.759494
69 53H 0.494845 0.659091
70 DAL AMP 0.494845 0.786667
71 TSB 0.494845 0.674419
72 G5A 0.494624 0.697674
73 50T 0.494505 0.74026
74 ADP 0.494382 0.75
75 5AS 0.494382 0.640449
76 AP5 0.494382 0.75
77 B4P 0.494382 0.75
78 F0P 0.490909 0.9
79 GEK 0.489796 0.913043
80 8QN 0.489796 0.786667
81 AT4 0.488889 0.721519
82 5AD 0.486842 0.828125
83 PAJ 0.484848 0.728395
84 52H 0.484536 0.659091
85 AU1 0.483516 0.730769
86 MAO 0.483146 0.782051
87 A3G 0.482759 0.882353
88 NEC 0.482759 0.797101
89 3AM 0.482353 0.733333
90 YAP 0.480769 0.802632
91 7D7 0.480519 0.794118
92 NB8 0.480392 0.782051
93 TXA 0.480392 0.766234
94 NVA LMS 0.48 0.693182
95 ATF 0.479167 0.721519
96 HEJ 0.478261 0.75
97 A3T 0.478261 0.852941
98 ACP 0.478261 0.753247
99 ATP 0.478261 0.75
100 7MD 0.476636 0.775
101 YSA 0.47619 0.697674
102 XAH 0.47619 0.775
103 9ZA 0.474747 0.746835
104 9ZD 0.474747 0.746835
105 APR 0.473118 0.773333
106 5FA 0.473118 0.75
107 AR6 0.473118 0.773333
108 AQP 0.473118 0.75
109 PRX 0.473118 0.753247
110 APC 0.473118 0.766234
111 WAQ 0.470588 0.815789
112 4AD 0.47 0.802632
113 NSS 0.47 0.697674
114 F2R 0.469565 0.756098
115 A5D 0.468085 0.84058
116 RBY 0.468085 0.789474
117 ADV 0.468085 0.789474
118 AD9 0.468085 0.730769
119 AGS 0.468085 0.7125
120 SAP 0.468085 0.7125
121 ADP PO3 0.468085 0.77027
122 MHZ 0.467391 0.782051
123 FA5 0.466667 0.813333
124 PTJ 0.466019 0.7375
125 00A 0.465347 0.746835
126 8X1 0.464646 0.693182
127 D3Y 0.464646 0.869565
128 VRT 0.463158 0.871429
129 GA7 0.462963 0.74359
130 LEU LMS 0.460784 0.674157
131 S8M 0.46 0.859155
132 OOB 0.46 0.786667
133 ADP VO4 0.459184 0.74026
134 VO4 ADP 0.459184 0.74026
135 T99 0.458333 0.721519
136 ANP 0.458333 0.730769
137 TAT 0.458333 0.721519
138 ACQ 0.458333 0.753247
139 B5V 0.456311 0.766234
140 AAT 0.453608 0.847222
141 2AM 0.453488 0.723684
142 8PZ 0.45283 0.697674
143 FYA 0.451923 0.786667
144 YLC 0.451327 0.797468
145 DLL 0.45098 0.786667
146 A3P 0.450549 0.746667
147 YLP 0.45045 0.777778
148 A22 0.45 0.74026
149 ARG AMP 0.449541 0.765432
150 ADP ALF 0.44898 0.7125
151 ALF ADP 0.44898 0.7125
152 2VA 0.446809 0.828571
153 OAD 0.446602 0.776316
154 3UK 0.446602 0.776316
155 80F 0.445378 0.73494
156 TYR AMP 0.444444 0.802632
157 6YZ 0.444444 0.753247
158 IOT 0.443478 0.768293
159 9SN 0.443396 0.7375
160 PR8 0.442308 0.807692
161 P5A 0.442308 0.704545
162 7D5 0.44186 0.714286
163 A1R 0.441176 0.769231
164 7C5 0.440367 0.797297
165 TT8 0.44 0.926471
166 YLA 0.439655 0.777778
167 YLB 0.438596 0.777778
168 3OD 0.438095 0.776316
169 9K8 0.438095 0.655556
170 BIS 0.438095 0.725
171 1ZZ 0.438095 0.753086
172 NVA 2AD 0.4375 0.859155
173 MAP 0.435644 0.7125
174 MYR AMP 0.433962 0.753086
175 NAI 0.433628 0.725
176 SO8 0.43299 0.816901
177 9X8 0.432692 0.734177
178 A6D 0.432692 0.74359
179 25A 0.431373 0.75
180 5SV 0.431373 0.7375
181 TYM 0.429825 0.813333
182 WSA 0.429825 0.705882
183 LAQ 0.428571 0.753086
184 3NZ 0.428571 0.833333
185 A3R 0.427184 0.769231
186 ADQ 0.427184 0.753247
187 8Q2 0.426087 0.674157
188 7MC 0.426087 0.756098
189 B5Y 0.425926 0.75641
190 B5M 0.425926 0.75641
191 LPA AMP 0.424779 0.753086
192 48N 0.424779 0.759494
193 JB6 0.424528 0.746835
194 PPS 0.424242 0.658824
195 AYB 0.423729 0.768293
196 PAP 0.42268 0.736842
197 OVE 0.422222 0.696203
198 3AD 0.421687 0.863636
199 4YB 0.419643 0.72093
200 A2P 0.419355 0.733333
201 CMP 0.419355 0.753425
202 2BA 0.419355 0.743243
203 ADP BMA 0.419048 0.753247
204 4UV 0.418182 0.75641
205 AHZ 0.415929 0.731707
206 QQX 0.41573 0.670886
207 A A 0.415094 0.75
208 AP0 0.413793 0.695122
209 ATP A A A 0.412844 0.76
210 SP1 0.411111 0.705128
211 QQY 0.411111 0.679487
212 ACK 0.411111 0.716216
213 RP1 0.411111 0.705128
214 AFH 0.410714 0.728395
215 4UU 0.410714 0.75641
216 DND 0.408696 0.766234
217 NXX 0.408696 0.766234
218 TXD 0.408696 0.725
219 7D3 0.408602 0.696203
220 CC5 0.407407 0.876923
221 25L 0.407407 0.74026
222 TAD 0.40708 0.75
223 DQV 0.40708 0.763158
224 AMP DBH 0.405405 0.753247
225 TXE 0.405172 0.725
226 AF3 ADP 3PG 0.405172 0.75
227 OMR 0.405172 0.743902
228 MTP 0.404762 0.72973
229 N0B 0.401575 0.777778
230 V3L 0.4 0.773333
231 YLY 0.4 0.768293
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2YX1; Ligand: SFG; Similar sites found with APoc: 842
This union binding pocket(no: 1) in the query (biounit: 2yx1.bio3) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 3RFV 15L 0.749064
2 3RFV NAI 0.749064
3 3LKZ SFG 0.934579
4 1XSE NDP 1.01695
5 4EMI NAD 1.19048
6 4EMI FAD 1.19048
7 3H9E NAD 1.19048
8 6GAR FAD 1.4881
9 5BRT FAD 1.4881
10 5BRT CH9 1.4881
11 3V1Y NAD 1.4881
12 1UDB UFG 1.4881
13 1UDB NAD 1.4881
14 1SAY PYR 1.4881
15 5MIT FAD 1.52905
16 5MIT NAP 1.52905
17 3A4V PYR 1.57729
18 3A4V NAD 1.57729
19 4MOP 2H5 1.57978
20 2EWM NAD 1.60643
21 1IM8 SAI 1.63934
22 1JQD SAH 1.71233
23 2AOT SAH 1.71233
24 1JQD HSM 1.71233
25 3HDY GDU 1.78571
26 3HDY FDA 1.78571
27 3HDY FAD 1.78571
28 1E1M NAP 1.78571
29 1E1M FAD 1.78571
30 4X9M FAD 1.78571
31 5KOK S9T 1.78571
32 3UCL NAP 1.78571
33 3UCL CYH 1.78571
34 3UCL FAD 1.78571
35 5KOK SAH 1.78571
36 5KOK R9T 1.78571
37 6ER9 FAD 1.78571
38 6ER9 NAP 1.78571
39 4NTD FAD 1.78571
40 3WGT FAD 1.78571
41 4USQ FAD 1.78571
42 3WGT QSC 1.78571
43 5DF1 58X 1.78571
44 5DF1 NAP 1.78571
45 3LXD FAD 1.78571
46 1XKQ NDP 1.78571
47 5EOW FAD 1.78571
48 1ORR NAD 1.78571
49 3ABI NAD 1.78571
50 4Z0H NAD 1.79641
51 1DSS NAD 1.8018
52 2WA2 SAM 1.81159
53 3CTY FAD 1.88088
54 5W7M SAH 1.92308
55 4PNE SAH 1.98676
56 1N2X SAM 1.99336
57 5BSZ SAH 2
58 1COY FAD 2.08333
59 1MO9 KPC 2.08333
60 1MO9 FAD 2.08333
61 1D4D FAD 2.08333
62 1BZL GCG 2.08333
63 5G3U FDA 2.08333
64 1BZL FAD 2.08333
65 1GPE FAD 2.08333
66 1COY AND 2.08333
67 2CDU FAD 2.08333
68 5G3U ITW 2.08333
69 1V5F FAD 2.08333
70 1V5F TPP 2.08333
71 5GSN FAD 2.08333
72 5GSN NAP 2.08333
73 4MIG G3F 2.08333
74 5GSN MMZ 2.08333
75 3NYC IAR 2.08333
76 3NYC FAD 2.08333
77 4E70 N7I 2.08333
78 2R4J 13P 2.08333
79 2R4J FAD 2.08333
80 5XNC MTA 2.08333
81 1GY8 NAD 2.08333
82 5UAO FAD 2.08333
83 5TUF TDC 2.08333
84 5TUF FAD 2.08333
85 3L4S NAD 2.08333
86 3L4S 3PG 2.08333
87 1RZM E4P 2.08333
88 2CDU ADP 2.08333
89 4J1Q NDP 2.08333
90 1KPH SAH 2.09059
91 1KPG SAH 2.09059
92 6GAS FAD 2.1148
93 6BWL NAD 2.13415
94 4TQG NDP 2.16718
95 1TDF FAD 2.21519
96 1TDF NAP 2.21519
97 5VW2 FDA 2.21519
98 5VW2 NAP 2.21519
99 3VC1 GST 2.24359
100 3VC1 SAH 2.24359
101 5KKA 6V0 2.24359
102 5BW4 SAM 2.24719
103 5EJ2 NAD 2.27273
104 1E3W NAD 2.29885
105 4YUW S4M 2.30263
106 4YUW 4JU 2.30263
107 1E6W NAD 2.30769
108 5OJI NAP 2.30769
109 5OJI ISN 2.30769
110 1YXM ADE 2.31023
111 5JE8 NAD 2.31788
112 2DT5 NAD 2.36967
113 1PS9 FAD 2.38095
114 2HQM FAD 2.38095
115 1XHC FAD 2.38095
116 4HA6 FAD 2.38095
117 2RAB NAD 2.38095
118 1KNR FAD 2.38095
119 2Q28 ADP 2.38095
120 2RAB FAD 2.38095
121 4USR FAD 2.38095
122 4XQC NAD 2.38095
123 4XQC 13D 2.38095
124 4C3Y FAD 2.38095
125 4C3Y ANB 2.38095
126 5I39 FAD 2.38095
127 3NKS FAD 2.38095
128 3G5S FAD 2.38095
129 2Y6Q FAD 2.38095
130 2Y6Q I7T 2.38095
131 6D6Y SAH 2.38095
132 5TTJ FAD 2.38095
133 1H82 GZZ 2.38095
134 1G8K MGD 2.38095
135 6C5B SAH 2.38095
136 1H82 FAD 2.38095
137 3T31 FAD 2.38095
138 3T31 DCQ 2.38095
139 3FG2 FAD 2.38095
140 2IXB A2G 2.38095
141 2IXB NAD 2.38095
142 3GMB FAD 2.38095
143 1RM0 D6P 2.38095
144 1RM0 NAI 2.38095
145 2YYY NAP 2.38095
146 1P31 EPU 2.38095
147 1SB8 UD2 2.38095
148 1SB8 NAD 2.38095
149 5LY1 PPI 2.38095
150 1U1I NAD 2.38095
151 1P3D UMA 2.38095
152 1V8B NAD 2.38095
153 5K0A FAD 2.42424
154 6GNA FAD 2.43056
155 3LCV SAM 2.4911
156 3EVF GTA 2.52708
157 3EVF SAH 2.52708
158 4K26 SFF 2.53623
159 4K26 NDP 2.53623
160 4UP3 FAD 2.54777
161 3KLJ FAD 2.5974
162 2O07 SPD 2.63158
163 2O07 MTA 2.63158
164 2A14 SAH 2.6616
165 3ELW SAM 2.66667
166 3ELW GP3 2.66667
167 1NAA ABL 2.67857
168 1NAA 6FA 2.67857
169 1FP1 SAH 2.67857
170 4B63 NAP 2.67857
171 4B63 FAD 2.67857
172 4B63 ORN 2.67857
173 3ICT FAD 2.67857
174 3ICS FAD 2.67857
175 1U2Z SAH 2.67857
176 3ICR FAD 2.67857
177 6C8R EQV 2.67857
178 5MPT SAH 2.67857
179 1FEC FAD 2.67857
180 2RGO FAD 2.67857
181 1Q9I TEO 2.67857
182 1Q9I FAD 2.67857
183 6H3O FAD 2.67857
184 1I8T FAD 2.67857
185 1XDS SAM 2.67857
186 2VVL FAD 2.67857
187 2C31 ADP 2.67857
188 2C31 TZD 2.67857
189 2VVM FAD 2.67857
190 5EIN NAP 2.67857
191 5FJN FAD 2.67857
192 5FJN BE2 2.67857
193 3UOY NAP 2.67857
194 3UOY FAD 2.67857
195 6DNT NAD 2.67857
196 1QZZ SAM 2.67857
197 5AHO TLA 2.67857
198 6C8R SAH 2.67857
199 3EYA FAD 2.67857
200 3WMX NAD 2.67857
201 3OND NAD 2.67857
202 3OND ADN 2.67857
203 5X68 FAD 2.67857
204 3K7M FAD 2.67857
205 1TZJ A3B 2.67857
206 6GKV SAH 2.67857
207 4UP4 GAL NAG 2.67857
208 2B4R NAD 2.67857
209 2B4R AES 2.67857
210 1U8X NAD 2.67857
211 5ZI2 NAD 2.67857
212 5YB7 ORN 2.67857
213 5YB7 FAD 2.67857
214 5ZI2 ADP 2.67857
215 5J7X FAD 2.67857
216 3ICT ADP 2.67857
217 1Z3C SA8 2.68456
218 4YAC NAI 2.6936
219 5GM1 SAH 2.6936
220 1J0X NAD 2.71084
221 2PWY SAH 2.71318
222 3OID NDP 2.71318
223 4NBW NAD 2.72374
224 3H8V ATP 2.73973
225 3OU2 SAH 2.75229
226 1L1E SAH 2.78746
227 4RL4 PPV 2.83019
228 3ZV6 NAD 2.84698
229 3ZV6 4HB 2.84698
230 1BDB NAD 2.88809
231 6EQS BV8 2.90909
232 5O42 9JW 2.91971
233 5O42 BGC 2.91971
234 5O42 NAD 2.91971
235 3RIY NAD 2.9304
236 5MGZ SAH 2.9661
237 4ONQ SFG 2.97619
238 5DNK SAH 2.97619
239 4ZCC FAD 2.97619
240 4ZCC NAI 2.97619
241 3AXB PRO 2.97619
242 3AXB FAD 2.97619
243 4CNK FAD 2.97619
244 3ZNN 4WL 2.97619
245 3ZNN FAD 2.97619
246 4RSL FAD 2.97619
247 5XWV 8H6 2.97619
248 2V6G NAP 2.97619
249 2EFJ SAH 2.97619
250 1H9A NAP 2.97619
251 3CGB FAD 2.97619
252 2DKH FAD 2.97619
253 2DKH 3HB 2.97619
254 5XWV NDP 2.97619
255 2WET FAD 2.97619
256 1KYZ FER 2.97619
257 3OZ2 FAD 2.97619
258 1DJN ADP 2.97619
259 1KYZ SAH 2.97619
260 5MBX SP5 2.97619
261 5MBX FAD 2.97619
262 2IV2 MGD 2.97619
263 4UCI SAM 2.97619
264 1VKO NAD 2.97619
265 5ULP KB1 2.98507
266 1RJD SAM 2.99401
267 2CUL FAD 3.01724
268 1H5Q NAP 3.01887
269 1CER NAD 3.02115
270 3WDM ADN 3.06513
271 1OAA OAA 3.0888
272 4RDH AMP 3.125
273 4RDI ATP 3.125
274 1GZ6 NAI 3.1348
275 2WSB NAD 3.14961
276 5E9W SAH 3.20513
277 5E8J SAH 3.20513
278 4URF NAD 3.22581
279 3NUG NAD 3.23887
280 1QFY FAD 3.24675
281 1QFY NAP 3.24675
282 4D79 ATP 3.26087
283 5F8F SFG 3.27381
284 4N49 SAM 3.27381
285 1QO8 FAD 3.27381
286 3TKA SAM 3.27381
287 1GET FAD 3.27381
288 1GET NAP 3.27381
289 1ELI PYC 3.27381
290 5NA1 FAD 3.27381
291 3P9C SAH 3.27381
292 2FR1 NDP 3.27381
293 4OPC PGT 3.27381
294 4OPC FDA 3.27381
295 5EEH SAH 3.27381
296 5EEH P9P 3.27381
297 1UWK NAD 3.27381
298 1UWK URO 3.27381
299 3ITJ FAD 3.27381
300 2AQJ TRP 3.27381
301 2AQJ FAD 3.27381
302 1PJS NAD 3.27381
303 1OC2 NAD 3.27381
304 1OC2 TDX 3.27381
305 6F7L FAD 3.27381
306 3V1U NAD 3.27381
307 3CIF G3H 3.27381
308 3CIF NAD 3.27381
309 1CDO NAD 3.27381
310 4YT4 FE9 3.27381
311 2XYQ SAH 3.27869
312 1UAY ADN 3.30579
313 1W8D NAP 3.31126
314 1W6U NAP 3.31126
315 1W73 NAP 3.31126
316 1EJ0 SAM 3.33333
317 1BC5 SAH 3.34572
318 5DM1 5D7 3.37079
319 5DM1 SAH 3.37079
320 2DTX BMA 3.40909
321 5OJ7 AR6 3.4965
322 5GWX SAM 3.52113
323 5GWX SAR 3.52113
324 1I1N SAH 3.53982
325 3P2E SAH 3.55556
326 5JJR SAH 3.57143
327 6F97 FAD 3.57143
328 3SQP FAD 3.57143
329 2IVD FAD 3.57143
330 3QJ4 FAD 3.57143
331 2GN4 NDP 3.57143
332 3AB1 FAD 3.57143
333 3GDN HBX 3.57143
334 3GDN FAD 3.57143
335 5ICE 2H4 3.57143
336 5ICE SAH 3.57143
337 2QA1 FAD 3.57143
338 2Q1S NAI 3.57143
339 2ZJ1 NAD 3.57143
340 2ZJ1 ARJ 3.57143
341 1OBB NAD 3.57143
342 2GN4 UD1 3.57143
343 4G5H NAP 3.57143
344 4G5H UD7 3.57143
345 3SJ7 NDP 3.57143
346 4YKG NAD 3.57143
347 4YKG FAD 3.57143
348 1XG5 NAP 3.58423
349 4NBU NAI 3.6
350 2Q1W NAD 3.6036
351 3LZW FAD 3.61446
352 3LZW NAP 3.61446
353 1AE1 NAP 3.663
354 3HB5 NAP 3.66972
355 2A8Y MTA 3.7037
356 5E1M PRO PRO LYS ARG ILE ALA 3.73444
357 5E1M SAH 3.73444
358 2PK3 A2R 3.73832
359 3O7W SAM 3.7415
360 5GT9 NAP 3.80228
361 4YAG NAI 3.80623
362 5TWB FAD 3.86905
363 5JAQ NAI 3.86905
364 5J5Z FAD 3.86905
365 3S5W FAD 3.86905
366 4BV6 FAD 3.86905
367 1Q1R FAD 3.86905
368 1RSG FAD 3.86905
369 1YY5 FAD 3.86905
370 4TXI FAD 3.86905
371 4A6D SAM 3.86905
372 6FHO FAD 3.86905
373 1Y8Q ATP 3.86905
374 5X7Q GLC GLC GLC GLC 3.86905
375 1H2B NAJ 3.86905
376 3CMC NAD 3.89222
377 1GEG NAD 3.90625
378 3U4C NDP 3.91459
379 2DKN NAI 3.92157
380 6BQ6 TER 3.92749
381 4Y9D NAI 3.93443
382 4FC7 NAP 3.97112
383 4FC7 COA 3.97112
384 1KYQ NAD 4.0146
385 4X7Y SAH 4.0146
386 2JAH NDP 4.04858
387 2JAP NDP 4.04858
388 1JQ3 AAT 4.05405
389 1EDO NAP 4.09836
390 3DXY SAM 4.12844
391 4BLW SAH 4.15225
392 4BLW AMP 4.15225
393 1A27 NAP 4.15225
394 3QOX SAH 4.16667
395 1YBH FAD 4.16667
396 4RPL 3UC 4.16667
397 4RPL FAD 4.16667
398 5OC1 FAD 4.16667
399 5BVA FAD 4.16667
400 5Y77 FAD 4.16667
401 5MZI FAD 4.16667
402 5MZI FYK 4.16667
403 3OBT SLB 4.16667
404 1E5Q NDP 4.16667
405 3PFG TLO 4.18251
406 3PFG SAM 4.18251
407 4FZV SAM 4.1841
408 5MW4 5JU 4.19162
409 3CH6 311 4.1958
410 3CH6 NAP 4.1958
411 4XZ3 COA 4.34783
412 2BOS GLA GAL GLC 4.41176
413 2BOS GLA GAL GLC NBU 4.41176
414 5N5D SAM 4.42478
415 5T2U NAP 4.43548
416 5YF1 SFG 4.46429
417 1YQZ FAD 4.46429
418 4AP3 NAP 4.46429
419 4AP3 FAD 4.46429
420 5YF1 8V0 4.46429
421 2YG3 FAD 4.46429
422 5ERG SAM 4.46429
423 4DSG UDP 4.46429
424 4DSG FAD 4.46429
425 4D5G FAD 4.46429
426 4D5G TPP 4.46429
427 5UR0 NAD 4.46429
428 1Z45 NAD 4.46429
429 5TUK FAD 4.46429
430 6B3A SAM 4.46429
431 1X87 NAD 4.46429
432 5CUQ NSC 4.49438
433 2OBF SAH 4.49827
434 2OBF F83 4.49827
435 6DUB SAH 4.5045
436 5DLY 5D7 4.51128
437 5DLY SAH 4.51128
438 3MAG SAH 4.56026
439 3GU3 SAH 4.57746
440 3OFK SAH 4.62963
441 3F8D FAD 4.64396
442 2VT3 ATP 4.65116
443 1FK8 NAD 4.66926
444 5FTW SAH 4.6875
445 1EFV AMP 4.70588
446 1EFV FAD 4.70588
447 4YRY FAD 4.71014
448 4YRY NAD 4.71014
449 3MCT SAH 4.7138
450 1XHL NDP 4.7138
451 1DL5 SAH 4.73186
452 2WPF FAD 4.7619
453 2WPF WPF 4.7619
454 4IV9 FAD 4.7619
455 4J36 1HR 4.7619
456 4D7E FAD 4.7619
457 1ZK7 FAD 4.7619
458 4J36 FAD 4.7619
459 1RYI GOA 4.7619
460 2Z3Y F2N 4.7619
461 1RYI FAD 4.7619
462 3TKY SAH 4.7619
463 2NPX FAD 4.7619
464 2NPX NAD 4.7619
465 2ZWA SAH 4.7619
466 1JNR FAD 4.7619
467 2GMH FAD 4.7619
468 3Q9T FAY 4.7619
469 4EDF UPG 4.7619
470 1R6D DAU 4.7619
471 1R6D NAD 4.7619
472 1KOL NAD 4.7619
473 6F9Q NAD 4.77941
474 2CFC NAD 4.8
475 4YDD MGD 4.8048
476 4YDD MD1 4.8048
477 3G89 SAM 4.81928
478 2PZM UDP 4.84848
479 2PZM NAD 4.84848
480 2HMT NAI 4.86111
481 1YC5 NCA 4.87805
482 4BUZ NAD 4.87805
483 4BUZ OCZ 4.87805
484 4BUZ OAD 4.87805
485 1G0N PHH 4.947
486 1G0N NDP 4.947
487 1LSS NAD 5
488 3BXO SAM 5.02092
489 3A28 NAD 5.03876
490 5NMX FAD 5.05952
491 5NMX NAP 5.05952
492 2C5A GDC 5.05952
493 2C5A NAD 5.05952
494 4GUT FAD 5.05952
495 4GUS FAD 5.05952
496 3AYI HCI 5.05952
497 3AYI FAD 5.05952
498 4HSU FAD 5.05952
499 4FWE FAD 5.05952
500 5JWC FAD 5.05952
501 4BJZ FAD 5.05952
502 4BJZ P3A 5.05952
503 5ZBC FAD 5.05952
504 3RHJ NAP 5.05952
505 1JG3 ADN 5.10638
506 3RJ5 NAD 5.11811
507 5FEU NAP 5.15464
508 5Y1G NAD 5.18293
509 5Y1G AKB 5.18293
510 2Q7V FAD 5.23077
511 1WG8 SAM 5.26316
512 1R18 SAH 5.28634
513 4NEC SAH 5.30303
514 1NW5 SAM 5.32915
515 2FK8 SAM 5.34591
516 1I9G SAM 5.35714
517 4KRI SAH 5.35714
518 2XVF FAD 5.35714
519 2XVE FAD 5.35714
520 2EG5 SAH 5.35714
521 4REP FAD 5.35714
522 2A8X FAD 5.35714
523 3LST SAH 5.35714
524 6FP4 E1T 5.35714
525 6FP4 FAD 5.35714
526 2JB2 FAD 5.35714
527 2JB2 PHE 5.35714
528 4M52 M52 5.35714
529 2C7G ODP 5.35714
530 2C7G FAD 5.35714
531 4M52 FAD 5.35714
532 5L95 AMP 5.37634
533 1NFQ NAI 5.38462
534 2HNK SAH 5.43933
535 6B92 SAH 5.44218
536 1ZBQ NAD 5.50459
537 3FRH SAH 5.5336
538 4J7U YTZ 5.55556
539 4J7U NAP 5.55556
540 1TPY SAH 5.57491
541 4ITU 1HS 5.57621
542 4ITU NAI 5.57621
543 6ECT SAM 5.60748
544 5K4W NAI 5.60748
545 5K4W THR 5.60748
546 1VL8 NAP 5.61798
547 5J60 FAD 5.625
548 3PT9 SAH 5.65476
549 1V59 FAD 5.65476
550 4RVG SAM 5.65476
551 4RVG TYD 5.65476
552 1FP2 SAH 5.65476
553 1FP2 HMO 5.65476
554 1V59 NAD 5.65476
555 3M6W SAM 5.65476
556 2YVF NAD 5.65476
557 2YVF FAD 5.65476
558 2YVJ FAD 5.65476
559 2ZXI FAD 5.65476
560 2RGJ FAD 5.65476
561 4K5S FAD 5.65476
562 4K5S PM0 5.65476
563 1UP7 NAD 5.65476
564 1Z6Z NAP 5.67376
565 2WK1 SAH 5.67376
566 2VDV SAM 5.69106
567 2BD0 NAP 5.7377
568 1PR9 NAP 5.7377
569 3D3W NAP 5.7377
570 2YY7 NAD 5.76923
571 1VMK GUN 5.77617
572 5Z75 NAD 5.8104
573 2P41 SAH 5.90164
574 4C4A SAH 5.95238
575 4YNU FAD 5.95238
576 4YNU LGC 5.95238
577 3LAD FAD 5.95238
578 4U8P FDA 5.95238
579 4U8P UDP 5.95238
580 3X0V FAD 5.95238
581 3LCC SAH 5.95745
582 3QFA FAD 6.03448
583 3BGD SAH 6.15385
584 3BGD PM6 6.15385
585 3O03 NAP 6.18557
586 4PIO SAH 6.19195
587 4PIO AVI 6.19195
588 3U31 NAD 6.2069
589 5FFF 5XC 6.22568
590 5FFF NAP 6.22568
591 4MO2 FDA 6.25
592 5ZYN FAD 6.25
593 4MO2 FAD 6.25
594 3CGD FAD 6.25
595 3CGD COA 6.25
596 1GTE FAD 6.25
597 3CGD NAD 6.25
598 1BXK NAD 6.25
599 3NJ4 NAD 6.25
600 6GFK SAH 6.3745
601 1NM5 NAP 6.40394
602 1NM5 NAD 6.40394
603 2BZG SAH 6.46552
604 2BGM NAJ 6.47482
605 4CQM NAP 6.51341
606 5M58 SAH 6.52174
607 3X0D SAH 6.54762
608 4KRG SAH 6.54762
609 5U8U FAD 6.54762
610 1T9D P25 6.54762
611 1T9D 1MM 6.54762
612 1T9D PYD 6.54762
613 5WKC FAD 6.54762
614 1T9D FAD 6.54762
615 3MB5 SAM 6.66667
616 1XTP SAI 6.69291
617 5UFN SAH 6.72269
618 4ZRN UPG 6.73077
619 4ZRN NAD 6.73077
620 4YSX FAD 6.73759
621 2Q0L FAD 6.75241
622 1UXG NAD 6.79612
623 1UXG FUM 6.79612
624 2B9W FAD 6.83962
625 5X62 SAH 6.84524
626 2NVK FAD 6.84524
627 3E1T FAD 6.84524
628 3GE7 AFQ 6.84524
629 2PT9 2MH 6.85358
630 2PT9 S4M 6.85358
631 2B4Q NAP 6.88406
632 6FDF SAH 6.88623
633 5THQ NDP 6.98529
634 3FZG SAM 7
635 5JCA NDP 7.04225
636 5JCA FAD 7.04225
637 2PX8 SAH 7.0632
638 3AD8 NAD 7.07071
639 2GAG NAD 7.07071
640 3AD8 FAD 7.07071
641 3AD8 PYC 7.07071
642 2GAG FAD 7.07071
643 2GAG FOA 7.07071
644 1IY8 NAD 7.11611
645 4DCM SAM 7.14286
646 1ZGA SAH 7.14286
647 6DEN TP9 7.14286
648 6DEN G8A 7.14286
649 6DEN FAD 7.14286
650 1KEW NAD 7.14286
651 1PNO NAP 7.22222
652 1DJL NAP 7.24638
653 1U7T TDT 7.27969
654 1U7T NAD 7.27969
655 1Q0S SAH 7.33591
656 1NV8 MEQ 7.39437
657 1NV8 SAM 7.39437
658 5HSA FAS 7.44048
659 5VN0 NAI 7.44048
660 5VN0 FAD 7.44048
661 2OOR TXP 7.47126
662 3I53 SAH 7.53012
663 3TLJ SAH 7.7381
664 1U3U BNF 7.7381
665 1U3U NAD 7.7381
666 1D1T NAD 7.7381
667 2ZIF SAM 7.74411
668 5Z2L NDP 7.7551
669 2I7C AAT 7.77385
670 2ZFU SAH 7.90698
671 5JGL SAM 7.95848
672 5WGR FAD 8.03571
673 4JDR FAD 8.03571
674 6EL3 NAP 8.03571
675 3SSO SAH 8.03571
676 3GEG NAD 8.09717
677 5JE0 SAH 8.09717
678 5JE0 AZ8 8.09717
679 3QWI CUE 8.14815
680 3QWI NAP 8.14815
681 1D4O NAP 8.15217
682 5KVA SAM 8.27338
683 3C6K SPD 8.33333
684 3C6K MTA 8.33333
685 5BUK FAD 8.33333
686 1REO FAD 8.33333
687 4GKV NAD 8.33333
688 5ZW3 SAH 8.44444
689 6CI9 NAP 8.49421
690 3GCZ SAM 8.51064
691 1XCL SAH 8.51064
692 4R6W PC 8.52713
693 4R6W SAH 8.52713
694 5ODQ FAD 8.69565
695 2AE2 PTO 8.84615
696 2AE2 NAP 8.84615
697 5K7U SAM 8.88889
698 4GQB 0XU 8.92857
699 5FA5 MTA 8.92857
700 3S1S SAH 8.92857
701 4D04 FAD 8.92857
702 4D04 NAP 8.92857
703 4X60 SFG 8.92857
704 4X60 3XV 8.92857
705 5TS5 FAD 8.92857
706 5XHA FRU 8.92857
707 3TN7 NJP 8.94942
708 3SJU NDP 8.96057
709 2NXE SAM 9.05512
710 3MQ2 SAH 9.17431
711 3Q9N COA 9.21986
712 3FUU ADN 9.22509
713 5WP5 SAH 9.22619
714 5WP4 SAH 9.22619
715 1RLZ NAD 9.22619
716 5HXI 5HN 9.22619
717 5HXI FAD 9.22619
718 1G60 SAM 9.23077
719 5MLR GRQ 9.24574
720 5MLR NAP 9.24574
721 2RH4 EMO 9.38628
722 5IL1 SAM 9.43396
723 1L7N ALF 9.47867
724 4M37 SAH 9.52381
725 1G55 SAH 9.52381
726 4M38 SAH 9.52381
727 5M67 NAD 9.52381
728 5M67 3D1 9.52381
729 5M67 ADE 9.52381
730 4YMH SAH 9.58333
731 4XUC SAM 9.63303
732 4XUC 43G 9.63303
733 1M2K APR 9.63855
734 3GF4 FAD 9.82143
735 3GF4 UPG 9.82143
736 4AT0 FAD 9.82143
737 4Y30 SAH 9.82143
738 4Y30 49L 9.82143
739 4FN4 NAD 9.84252
740 1O97 FAD 9.84848
741 1O97 AMP 9.84848
742 1O94 ADP 9.84848
743 3HVJ 705 9.95475
744 1P1C SAH 10.0503
745 2GDZ NAD 10.1124
746 1SQF SAM 10.119
747 5F7J ADE 10.625
748 1S7G NAD 10.6719
749 1S7G APR 10.6719
750 5FUB SAH 10.7143
751 3NT6 FAD 10.7143
752 3NTA FAD 10.7143
753 6F5Z SAH 10.8225
754 4II2 ATP 10.8434
755 1FL2 FAD 10.9677
756 4POO SAM 11
757 1PN0 IPH 11.0119
758 1PN0 FAD 11.0119
759 3NTD FAD 11.0119
760 3RKR NAP 11.0687
761 2EJU SAH 11.3095
762 6ARJ BW4 11.3095
763 6ARJ SAH 11.3095
764 5DX8 SFG 11.3095
765 5DXA SFG 11.3095
766 5DX1 SFG 11.3095
767 5DWQ SFG 11.3095
768 5DX0 SFG 11.3095
769 3GD4 FAD 11.3095
770 3GD4 NAD 11.3095
771 6ECU SAH 11.3095
772 1F3L SAH 11.5265
773 1R37 NAD 11.5274
774 4LWP SAH 11.6071
775 3QVP FAD 11.6071
776 3EVG SAH 11.6364
777 1QAN SAH 11.8852
778 4Z24 FAD 11.9048
779 2DPM SAM 11.9718
780 5YJI 8WO 11.9718
781 5YJI SAH 11.9718
782 6ECW SAH 12.0635
783 5FWA J7C 12.2024
784 2IID FAD 12.2024
785 2IID PHE 12.2024
786 5U19 SAH 12.2024
787 5U19 827 12.2024
788 5LOG SAH 12.4464
789 3GDH SAH 12.4481
790 4RF2 NAP 12.5
791 3DUW SAH 12.5561
792 3A4T SFG 12.7737
793 5F2K OCA 12.7976
794 5F2K SAH 12.7976
795 1YB5 NAP 12.8205
796 5GWT SIN 12.9496
797 5GWT NAD 12.9496
798 5YJF SAH 13.0282
799 5YJF 8WO 13.0282
800 4EUE NAI 13.0952
801 1C0I BE2 13.9881
802 1C0I FAD 13.9881
803 4QTU SAM 14.0741
804 1ZEM NAD 14.1221
805 5KOX FAD 14.2857
806 5KOX RFP 14.2857
807 2E5V FAD 14.2857
808 3EGI ADP 14.5631
809 4KIB SAH 14.5833
810 2BVL GLC 14.5833
811 2BVL UDP 14.5833
812 3C3Y SAH 14.7679
813 1E6E FAD 14.8438
814 4IWN GEK 14.8472
815 4M73 M72 14.881
816 4M73 SAH 14.881
817 1L3I SAH 15.1042
818 4KGD FAD 15.1786
819 4KGD TDP 15.1786
820 3NDJ JHZ 15.7738
821 3NDJ SAH 15.7738
822 5T67 SAH 15.7738
823 5T67 JHZ 15.7738
824 1ZQ9 SAM 15.7895
825 3DMH SAM 16.0714
826 3DMH GMP 16.0714
827 3T7S SAM 16.4179
828 1LVL NAD 16.6667
829 1LVL FAD 16.6667
830 2AG5 NAD 17.0732
831 2F5Z FAD 17.1875
832 4OBW SAM 17.8988
833 5XLX SAH 18.0851
834 3H2B SAH 18.2266
835 2JJQ SAH 18.4524
836 3RNM FAD 18.9655
837 3CBG SAH 19.8276
838 5E72 SAM 19.9405
839 5FA8 SAM 20.4969
840 3GRU AMP 23.7288
841 1WY7 SAH 25.1208
842 4J56 FAD 27.193
Pocket No.: 2; Query (leader) PDB : 2YX1; Ligand: SFG; Similar sites found with APoc: 13
This union binding pocket(no: 2) in the query (biounit: 2yx1.bio3) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 1CF2 NAP 1.78571
2 2RGH FAD 2.67857
3 6F3M NAD 2.67857
4 1K27 MTM 2.82686
5 1RJW ETF 2.97619
6 1FUR MLT 3.27381
7 3LU1 NAD 3.27381
8 1PVN MZP 3.27381
9 4GLL NAD 3.86905
10 1QPB PYM 4.16667
11 2YVJ NAI 5.65476
12 4XYM COA 10.1293
13 2VPY PCI 10.2564
Pocket No.: 3; Query (leader) PDB : 2YX1; Ligand: SFG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2yx1.bio2) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2YX1; Ligand: SFG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2yx1.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
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