-->
Receptor
PDB id Resolution Class Description Source Keywords
2ZFZ 1.85 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN HEXAMER OF ARGR F MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH ARGININE MYCOBACTERIUM TUBERCULOSIS L-ARGININE REPRESSOR DNA BINDING PROTEIN CORE OLIGOMERIZADOMAIN ALPHA/BETA TOPOLOGY STRUCTURAL GENOMICS TB STRUCTGENOMICS CONSORTIUM TBSGC AMINO-ACID BIOSYNTHESIS ARGINIBIOSYNTHESIS DNA-BINDING TRANSCRIPTION TRANSCRIPTION REGPSI-2 PROTEIN STRUCTURE INITIATIVE
Ref.: STRUCTURE OF THE C-TERMINAL DOMAIN OF THE ARGININE PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS. ACTA CRYSTALLOGR.,SECT.D V. 64 950 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ARG A:300;
B:300;
C:300;
D:300;
E:300;
F:300;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
submit data
175.209 C6 H15 N4 O2 C(C[C...
GAI A:400;
E:400;
Invalid;
Invalid;
none;
none;
submit data
59.07 C H5 N3 C(=N)...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2ZFZ 1.85 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN HEXAMER OF ARGR F MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH ARGININE MYCOBACTERIUM TUBERCULOSIS L-ARGININE REPRESSOR DNA BINDING PROTEIN CORE OLIGOMERIZADOMAIN ALPHA/BETA TOPOLOGY STRUCTURAL GENOMICS TB STRUCTGENOMICS CONSORTIUM TBSGC AMINO-ACID BIOSYNTHESIS ARGINIBIOSYNTHESIS DNA-BINDING TRANSCRIPTION TRANSCRIPTION REGPSI-2 PROTEIN STRUCTURE INITIATIVE
Ref.: STRUCTURE OF THE C-TERMINAL DOMAIN OF THE ARGININE PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS. ACTA CRYSTALLOGR.,SECT.D V. 64 950 2008
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 291 families.
1 3CAG - ARG C6 H15 N4 O2 C(C[C@@H](....
2 2ZFZ - ARG C6 H15 N4 O2 C(C[C@@H](....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 247 families.
1 3CAG - ARG C6 H15 N4 O2 C(C[C@@H](....
2 2ZFZ - ARG C6 H15 N4 O2 C(C[C@@H](....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 3CAG - ARG C6 H15 N4 O2 C(C[C@@H](....
2 2ZFZ - ARG C6 H15 N4 O2 C(C[C@@H](....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ARG; Similar ligands found: 42
No: Ligand ECFP6 Tc MDL keys Tc
1 ARG 1 1
2 DAR 1 1
3 CIR 0.735294 0.763158
4 AAR 0.705882 0.783784
5 ILO 0.615385 0.783784
6 3AR 0.595238 0.891892
7 4JK 0.585366 0.789474
8 NMM 0.585366 0.888889
9 VUR 0.585366 0.810811
10 HAR 0.585366 0.780488
11 VIO 0.581395 0.769231
12 WT2 0.571429 0.805556
13 DA2 0.55814 0.744186
14 2MR 0.545455 0.864865
15 2YH 0.545455 0.65
16 3KJ 0.545455 0.680851
17 1KJ 0.533333 0.744186
18 JM2 0.533333 0.731707
19 NRG 0.521739 0.622642
20 RPI 0.521739 0.64
21 2YJ 0.521739 0.619048
22 API 0.515152 0.611111
23 LN6 0.510638 0.725
24 HRG 0.5 0.941176
25 JM7 0.5 0.731707
26 2KJ 0.489796 0.727273
27 D20 0.489796 0.744186
28 AS1 0.489796 0.8
29 ORN 0.472222 0.757576
30 JM8 0.470588 0.714286
31 JM6 0.470588 0.697674
32 JM4 0.470588 0.697674
33 LYS ARG LYS ARG LYS ARG LYS ARG 0.463415 0.848485
34 MLZ 0.463415 0.65
35 JM5 0.461538 0.714286
36 DLY 0.447368 0.735294
37 DAB 0.441176 0.685714
38 LYS 0.435897 0.764706
39 0TF 0.428571 0.619048
40 2YG 0.42 0.619048
41 PG3 0.416667 0.756757
42 6CL 0.414634 0.638889
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: 231
This union binding pocket(no: 1) in the query (biounit: 2zfz.bio1) has 94 residues
No: Leader PDB Ligand Sequence Similarity
1 2HHP FLC None
2 1KNM LAT None
3 4NTO 1PW None
4 3KPE TM3 None
5 1T0S BML None
6 2YLD CMO None
7 1GXU 2HP None
8 1GOJ ADP None
9 5V4R MGT None
10 5URY PAM None
11 4TV1 36M None
12 4RYV ZEA None
13 2FMD MAN MAN None
14 4CQK PIO None
15 5EE7 5MV None
16 2E1A MSE None
17 2VWA PTY None
18 1RL4 BRR None
19 5C9J DAO None
20 6BR8 PGV None
21 2WD7 VGD None
22 3FAL REA None
23 5JDI 6JO None
24 3B9Q MLI None
25 4TUZ 36J None
26 5BQ5 ADP BEF None
27 6BR9 6OU None
28 4OJ8 2TQ None
29 5HYR EST None
30 4MG8 27J None
31 5H67 ATP None
32 6BR8 6OU None
33 2VSS V55 None
34 4MGD 27N None
35 4WCX SAM None
36 1KA1 A3P None
37 4RHP PEF None
38 4XCL AGS None
39 1Q7E MET None
40 1T0A FPP None
41 2VZZ SCA None
42 4RC8 STE None
43 5XVR TRH None
44 4OAS 2SW None
45 4POW OP1 None
46 1DJL NAP None
47 3MN6 ATP None
48 1Q2C COA None
49 5K53 STE None
50 2ZRU FMN None
51 1D4O NAP None
52 2EV9 NAP None
53 2EV9 SKM None
54 4C8E C5P None
55 4O4Z N2O None
56 4BVM VCA None
57 3O61 GDD None
58 3MN7 ATP None
59 5FVJ ACO None
60 4MOB COA None
61 1YAG ATP None
62 2QQ0 TMP None
63 2QQ0 ADP None
64 5HA0 LTD None
65 4R5M 4NO None
66 1QSR ACO None
67 4CVN ADP 1.45985
68 1I0B PEL 2.53165
69 3AQT RCO 2.53165
70 2PYW ADP 2.53165
71 4BNU 9KQ 2.53165
72 5IDM ANP 2.53165
73 4NST ADP 2.53165
74 4Z9D NAD 2.53165
75 2VK4 TPP 2.53165
76 1EWY FAD 2.53165
77 4B0T ADP 2.53165
78 1QVJ RP5 3.79747
79 4PL9 ADP 3.79747
80 1ORR CDP 3.79747
81 1SJD NPG 3.79747
82 2D2F ADP 3.79747
83 2E2P ADP 3.79747
84 3QDV A2G 3.79747
85 5LJW ANP 3.79747
86 3LN9 FLC 3.79747
87 5DEX 5E0 3.79747
88 2VBA P4T 3.79747
89 1BGQ RDC 3.79747
90 2WOR 2AN 5.06329
91 5CX6 CDP 5.06329
92 3H4L ANP 5.06329
93 1XPJ TLA 5.06329
94 1XNK XS2 5.06329
95 6CB2 OLC 5.06329
96 5L9O GOP 5.06329
97 4LIK CIT 5.06329
98 5YAK YOF 5.06329
99 1Z0K GTP 5.06329
100 2PIA FMN 5.06329
101 3K5I ADP 5.06329
102 4FL3 ANP 5.06329
103 4HMT NNV 5.06329
104 4HMT FMN 5.06329
105 4NJH 2K8 5.06329
106 6EKZ SNP 5.06329
107 4NJH SAM 5.06329
108 3ZLM ANP 5.31915
109 3SE5 ANP 6.09756
110 5LWY OLB 6.32911
111 5GVR LMR 6.32911
112 4G86 BNT 6.32911
113 4ZGM 32M 6.32911
114 4OGQ 7PH 6.32911
115 5LX9 OLB 6.32911
116 4AG5 ADP 6.32911
117 2YW2 ATP 6.32911
118 1T5B FMN 6.32911
119 2CNT COA 6.32911
120 5ICE SAH 6.32911
121 3RUV ANP 6.32911
122 6E1Q CFA 7.59494
123 5WS9 ATP 7.59494
124 3VPD BUA 7.59494
125 4LC1 GDP 7.59494
126 2CDN ADP 7.59494
127 5ZBL AMP 7.59494
128 3ETG GWD 7.59494
129 5GXU FMN 7.59494
130 2QXL ATP 7.59494
131 4PYW ACE THR THR ALA ILE NH2 7.59494
132 5V7P SAH 7.59494
133 4CBU ATP 7.59494
134 2R40 EPH 7.59494
135 4QYS PLP SEP 7.59494
136 2HQM FAD 7.59494
137 5AE9 OKO 7.59494
138 3B9Z CO2 8.86076
139 1WD4 AHR 8.86076
140 5OLK DTP 8.86076
141 6C0B MLI 8.86076
142 1BW9 PPY 8.86076
143 1C1X HFA 8.86076
144 1Y8O ADP 8.86076
145 3KIF GDL 8.86076
146 3GZ8 APR 8.86076
147 3WQT ANP 8.86076
148 1YYE 196 8.86076
149 4ZON 4Q1 8.86076
150 3PFD FDA 8.86076
151 1J0D 5PA 8.86076
152 4YDS ATP 10.1266
153 1I4D GDP 10.1266
154 3N9R TD3 10.1266
155 2X24 X24 10.1266
156 1ZGA HMK 10.1266
157 4GCZ ADP 10.1266
158 5BVT PAM 10.1266
159 5K8S CMP 10.1266
160 2ZYJ PGU 10.1266
161 4A59 AMP 10.1266
162 3WCA FPS 10.1266
163 4HK8 XYP XYP XYP XYP XYP XYP 10.1266
164 1DKU AP2 10.1266
165 5W7B MYR 11.3924
166 5OSW DIU 11.3924
167 5Z3I ADE 11.3924
168 3E70 GDP 11.3924
169 4QM7 GTP 11.3924
170 1R0X ATP 11.3924
171 3U4L ATP 11.3924
172 1YKD CMP 11.3924
173 4IPE ANP 11.3924
174 4OKZ 3E9 11.3924
175 5UWA 8ND 11.3924
176 5GLN XYP XYP XYP 11.3924
177 5GLN XYS 11.3924
178 1ZXM ANP 11.3924
179 4RJK TPP 11.3924
180 3LRE ADP 12.6582
181 2AWN ADP 12.6582
182 1OLT SAM 12.6582
183 2PZE ATP 12.6582
184 3RLF MAL 12.6582
185 1G6O ADP 12.6582
186 3IAE D7K 12.6582
187 5M37 9SZ 13.9241
188 5M36 9SZ 13.9241
189 2H6T IVA VAL VAL STA ALA STA 13.9241
190 3F6R FMN 13.9241
191 5MR6 FAD 13.9241
192 5AOA PPI 15.1899
193 4MRP GSH 15.1899
194 5E9G GLV 15.1899
195 3DFR MTX 15.1899
196 4Q0A 4OA 15.1899
197 2GJN FMN 15.1899
198 5Z84 CHD 16.4557
199 5ZCO CHD 16.4557
200 5W97 CHD 16.4557
201 3TK1 GDP 16.4557
202 3AI3 SOE 16.4557
203 3DVA TPW 16.4557
204 1YQT ADP 17.7215
205 5MEX PAP 17.7215
206 3QFU ADP 18.9873
207 1C7S CBS 18.9873
208 5K52 OCD 18.9873
209 2BUP ATP 18.9873
210 2BUP ADP 18.9873
211 2A5F GTP 18.9873
212 5EXW 7DT 18.9873
213 4B4U NAP 20.2532
214 5IM3 DTP 20.2532
215 4D86 ADP 20.2532
216 4LNL 2BO 21.519
217 4LNL 2BK 21.519
218 4LNL PLG 21.519
219 1Q19 SSC 21.519
220 5YJF 8WO 22.7848
221 6A5Y 9CR 25.3165
222 3OKI OKI 25.3165
223 1ZPD CIT 29.1139
224 2VBF TPP 29.1139
225 2Q1H AS4 30.3797
226 1UKQ GLC ACI G6D GLC 31.6456
227 5OCA 9QZ 32.9114
228 1NLI ADE 34.1772
229 2UZH IPE 35.443
230 2VHJ ADP 36.7089
231 5LUN ARG 37.9747
Pocket No.: 2; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2zfz.bio1) has 94 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: 68
This union binding pocket(no: 3) in the query (biounit: 2zfz.bio1) has 102 residues
No: Leader PDB Ligand Sequence Similarity
1 3A4M ADP None
2 5KUT GDP None
3 2FR3 REA None
4 1Z0A GDP None
5 4U0S ADP None
6 3KAP FMN None
7 5L3W GDP None
8 4R57 ACO None
9 2OFW ADX None
10 2J9D ADP None
11 2EW1 GNP None
12 1GHE ACO None
13 3KRU FMN None
14 4UTG ANP None
15 4RKS MEV 3.2641
16 2VVG ADP 3.79747
17 5TWO 7MV 3.79747
18 4L9Z COA 3.79747
19 2GSD NAD 3.79747
20 1RJW ETF 5.06329
21 5OES ADP 5.06329
22 1LBF 137 5.06329
23 4FRZ ADP 6.32911
24 3H4S ADP 6.32911
25 3LPF Z77 6.32911
26 5ZYN SIN 7.59494
27 4HSE ADP 7.59494
28 5C2H 4XU 7.59494
29 5L3V GDP 7.59494
30 2WMH GAL FUC 7.59494
31 5XDT MB3 7.59494
32 5Y77 FAD 7.59494
33 1YP4 ADQ 7.59494
34 1RRC ADP 8.86076
35 4LO2 GAL BGC 8.86076
36 4Y4V DAL 10.1266
37 3B6C SDN 10.1266
38 4YSX E23 10.1266
39 1P3D ANP 10.1266
40 4D81 ADP 10.1266
41 1H5T DAU 10.1266
42 1DDG FAD 10.1266
43 4D9C PMP 10.1266
44 2RDT 2RD 10.1266
45 9LDT NAD 10.1266
46 1GQY ACP 11.3924
47 4IVG ANP 11.3924
48 3D3X ARG ILE MET GLU NH2 11.3924
49 1TLL FMN 12.6582
50 2UZ1 TPP 12.6582
51 2CVZ NDP 12.6582
52 5CHR 4NC 13.9241
53 5KGS 6SR 13.9241
54 4C5N ACP 13.9241
55 5CK5 GDP 15.1899
56 1GKZ ADP 15.1899
57 3BFX A3P 16.4557
58 5YV5 ADP 17.7215
59 5G5W R8C 17.7215
60 4A38 BZS 18.9873
61 5UY8 AMZ 18.9873
62 5UY8 8UM 18.9873
63 4IXH IMP 20.2532
64 4O1M NAD 21.519
65 6CD1 PLG 24.0506
66 3GAY P6T 25.3165
67 4JNE ATP 25.3165
68 3IB1 IMN 39.2405
Pocket No.: 4; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2zfz.bio1) has 94 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: 60
This union binding pocket(no: 5) in the query (biounit: 2zfz.bio1) has 78 residues
No: Leader PDB Ligand Sequence Similarity
1 6BMS POV None
2 1TV5 N8E None
3 5JCJ 6JM None
4 2CJW GDP None
5 6CAM BGC None
6 4R29 SAM None
7 3ZBQ GDP None
8 4TR9 ASP TRP ASN None
9 3KTA AP5 None
10 1AQU A3P None
11 6CGN DA None
12 3T7S SAM None
13 1U8Z GDP None
14 4B1W ATP None
15 5IDM C2E 2.53165
16 2HMT NAI 2.53165
17 4A2A ATP 2.53165
18 3HF3 FMN 2.53165
19 6BFG FMN 2.53165
20 2BCG GER 3.79747
21 4M4K GDU 3.79747
22 4M4K XYP XYP 3.79747
23 3HYW DCQ 5.06329
24 1IGW PYR 5.06329
25 1LYX PGA 5.06329
26 2BUC 008 5.06329
27 6APL C5P 5.06329
28 1DEK DGP 5.06329
29 2OEG UPG 5.06329
30 3T5M AMP 6.32911
31 4TQK NAG 6.32911
32 6C4A PYR 6.32911
33 1F06 NDP 6.32911
34 1S16 ANP 6.32911
35 6GZD LCI 6.32911
36 2AZC 3TL 6.32911
37 4UBS DIF 7.59494
38 3GVL SLB SIA 7.59494
39 3ASZ C5P 7.59494
40 3EDF CE6 7.59494
41 1IT7 GUN 8.86076
42 3ZRR PXG 8.86076
43 5GK9 ACO 8.86076
44 4RLT FSE 10.1266
45 1C3X 8IG 10.1266
46 5UGW GSH 11.3924
47 3TLC 7MD 12.6582
48 2YY8 SAM 12.6582
49 4DQL FAD 12.6582
50 4F4S EFO 13.1579
51 1SBZ FMN 13.9241
52 5LU5 M7P 13.9241
53 6B2M COA 15.1899
54 4COL DTP 15.1899
55 3SBZ MLI 17.7215
56 2PW0 TRC 20.2532
57 1ZPD DPX 29.1139
58 4DXJ 0M9 30.3797
59 5TDF 7A3 30.3797
60 2X3J ATP 31.6456
Pocket No.: 6; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 2zfz.bio1) has 102 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: 93
This union binding pocket(no: 7) in the query (biounit: 2zfz.bio2) has 102 residues
No: Leader PDB Ligand Sequence Similarity
1 4QO5 NAG None
2 6DW2 HD4 None
3 4U00 ADP None
4 5U32 GDP None
5 3KO0 TFP None
6 6FX2 FUC C4W NAG BMA MAN NAG GAL None
7 1P4V GLY None
8 4R2I ANP None
9 5MWE TCE None
10 3I0O SMI None
11 6BKL EU7 None
12 3QX9 ATP None
13 5CXX FER None
14 4HBM 0Y7 None
15 5LQ8 GB None
16 1G16 GDP None
17 3MGB GHP 3MY 3FG GHP GHP OMY 3FG None
18 3Q2K HP7 None
19 5TAR GDP None
20 3QF7 ANP None
21 5VL2 9EG None
22 5H2U 1N1 None
23 5OKT 9XK 2.53165
24 5OEC GDP 2.53165
25 1UJ5 5RP 3.79747
26 3Q72 GNP 3.79747
27 1RV1 IMZ 3.79747
28 3QDW A2G 3.79747
29 3Q85 GNP 3.79747
30 4Q86 AMP 3.79747
31 4WZ6 ATP 5.06329
32 5KAX RHQ 5.06329
33 2D7I NGA 5.06329
34 2CHT TSA 5.06329
35 4QAR ADE 5.06329
36 1XMY ROL 5.06329
37 5MJA 7O3 5.06329
38 3ITA AIC 7.59494
39 4UCC ZKW 7.59494
40 2HT6 GDP 7.59494
41 2HZL PYR 7.59494
42 1YRB GDP 7.59494
43 4U60 SIA 7.59494
44 4U60 SIA GAL NGA 7.59494
45 1OG1 TAD 7.59494
46 2WPW ACO 7.59494
47 2UW1 GVM 8.86076
48 4G8R 96P 8.86076
49 4UMJ BFQ 8.86076
50 3COB ADP 8.86076
51 4DKX GDP 8.86076
52 2JGV ADP 8.86076
53 4O08 PO6 8.86076
54 5O74 GDP 10.1266
55 1VG1 GDP 10.1266
56 5TE1 7A2 10.1266
57 3UPY FOM 10.1266
58 1M5W DXP 10.1266
59 3ZIA ADP 11.3924
60 2WC1 FMN 11.3924
61 3IUY AMP 11.3924
62 2EFE GNH 11.3924
63 3GJ0 GDP 11.3924
64 5A96 GTP 11.3924
65 2ZHZ ATP 11.3924
66 4O8A 2OP 11.3924
67 5TCI MLI 12.6582
68 1LK7 DER 12.6582
69 2CBZ ATP 13.9241
70 1TL2 NDG 13.9241
71 1ZOY UQ1 13.9241
72 1JJ7 ADP 13.9241
73 3ZVS MLI 13.9241
74 2HIM ASP 15.1899
75 3MD0 GDP 16.4557
76 2Y69 CHD 16.4557
77 4I90 CHT 16.4557
78 2OG2 MLI 17.7215
79 2V7Q ADP 17.7215
80 1B0U ATP 17.7215
81 3WY9 GDP 17.7215
82 4J0Q GDP 17.7215
83 3ZKI WZV 17.7215
84 4P3Y GDP 18.9873
85 3KU0 ADE 18.9873
86 3U6B GDP 18.9873
87 4JZX 476 24.0506
88 4B9Q ATP 25.3165
89 3AKI AH8 26.5823
90 3ZZH ARG 29.1139
91 3CPJ GDP 32.9114
92 1WDK N8E 34.1772
93 4KRG SAH 35.443
Pocket No.: 8; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: 35
This union binding pocket(no: 8) in the query (biounit: 2zfz.bio2) has 94 residues
No: Leader PDB Ligand Sequence Similarity
1 5T52 NGA None
2 1MID LAP None
3 6BOC EU7 None
4 4KFU ACP None
5 6BKL RIM None
6 2QES ADE None
7 5NNT DPV None
8 6FTB M0E None
9 2ED4 NAD 2.53165
10 2DQA NAG NAG NAG 2.53165
11 3LL2 MAN MAN MAN MAN MAN MAN MAN MAN 3.79747
12 3OF1 CMP 3.79747
13 2EB5 OXL 5.06329
14 1G6H ADP 5.06329
15 5NM7 GLY 6.32911
16 3S6X SIA GAL BGC 7.59494
17 4XSH GSP 7.59494
18 4XZ3 ACP 8.86076
19 5ZXD ATP 8.86076
20 3B0X DGT 8.86076
21 1H5R THM 10.1266
22 6D5J FV4 10.1266
23 5AZC PGT 10.1266
24 5X2N ALA 11.3924
25 1OXV ANP 12.6582
26 2FAR DTP 12.6582
27 3SQP 3J8 13.9241
28 3EWA ANP 13.9241
29 1VG9 GDP 13.9241
30 3EC1 GDP 16.4557
31 2XT3 ADP 17.7215
32 4LI4 AMP 17.7215
33 2F6U CIT 24.0506
34 4LHD GLY 27.8481
35 6A20 ADP 27.8481
Pocket No.: 9; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: 23
This union binding pocket(no: 9) in the query (biounit: 2zfz.bio2) has 78 residues
No: Leader PDB Ligand Sequence Similarity
1 5C1M OLC None
2 4JLS 3ZE None
3 6BOC RIM None
4 4RJD TFP None
5 4MG9 27K None
6 6BYF CIT None
7 1T5C ADP 2.53165
8 2PKA BEN 7.59494
9 1G4U AF3 7.59494
10 3PTG 932 10.1266
11 2BQP GLC 10.1266
12 1U4J MAN 11.3924
13 4V3I ASP LEU THR ARG PRO 11.3924
14 4UP4 GAL NAG 11.3924
15 1PVC ILE SER GLU VAL 12.6582
16 2WHX ADP 12.6582
17 2IMG MLT 12.6582
18 2HIM ASN 15.1899
19 4C2C ALA ALA ALA 18.9873
20 1BGV GLU 21.519
21 1G51 AMP 21.519
22 3NHB ADP 27.8481
23 1NC2 DOE 36.7089
Pocket No.: 10; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: 40
This union binding pocket(no: 10) in the query (biounit: 2zfz.bio3) has 94 residues
No: Leader PDB Ligand Sequence Similarity
1 5A7C 5D4 None
2 3GD8 GOL None
3 1RZ1 NAD None
4 2VOH CIT None
5 4AVV CD None
6 4AVV GHE None
7 1IK4 PGH None
8 2QIE 8CS None
9 4LWU 20U None
10 3WUR O4B None
11 3ZC7 ATP None
12 2GMH UQ5 None
13 3LE7 ADE 3.79747
14 2PRG BRL 3.79747
15 2VSU ACO 3.79747
16 2H92 C5P 3.79747
17 3G58 988 5.06329
18 5EE5 GTP 5.06329
19 3GFS FMN 5.06329
20 4JEJ 1GP 6.32911
21 4R98 GNH 6.32911
22 4HEQ FMN 7.59494
23 4YLG GDP 7.59494
24 4ZH7 FUC GAL NAG GAL FUC 8.86076
25 6HKE MLT 8.86076
26 3B00 16A 8.86076
27 3CV2 COA 10.1266
28 5VZ0 2BA 10.1266
29 5V3Y 5V8 10.1266
30 1KBJ FMN 10.1266
31 3C56 PH4 10.1266
32 3K56 IS3 11.3924
33 2O1V ADP 12.6582
34 4V1F BQ1 13.9535
35 2J5V PCA 15.1899
36 4JE7 BB2 16.4557
37 1DCP HBI 16.4557
38 4EIL FOL 18.9873
39 1JG3 VAL TYR PRO IAS HIS ALA 22.7848
40 2ZUX RAM 22.7848
Pocket No.: 11; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 2zfz.bio3) has 94 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 2ZFZ; Ligand: ARG; Similar sites found with APoc: 19
This union binding pocket(no: 12) in the query (biounit: 2zfz.bio3) has 102 residues
No: Leader PDB Ligand Sequence Similarity
1 1F9V ADP None
2 4J6W CTP None
3 5TB5 GDP None
4 1KY3 GDP None
5 3ZCB ATP None
6 2F9L GDP None
7 2A9K GDP None
8 3WBZ ATP None
9 1KAO GDP None
10 2X77 GDP 2.53165
11 5F7U GLC GLC 7.59494
12 5M04 GDP 7.59494
13 1MR3 G3D 11.3924
14 5TSH ADP 12.6582
15 1MKY GDP 16.4557
16 5W7Q GDP 18.9873
17 1D8T GDP 18.9873
18 5W76 GDP 18.9873
19 5W75 GDP 18.9873
APoc FAQ
Feedback