Receptor
PDB id Resolution Class Description Source Keywords
2ZMK 2.5 Å NON-ENZYME: BINDING CRYSTL STRUCTURE OF BASIC WINGED BEAN LECTIN IN COMPLEX WITH ALPHA-1,4-GAL-BETA-ETHYLENE PSOPHOCARPUS TETRAGONOLOBUS LEGUME LECTIN SUGAR BINDING PROTEIN SUGAR SPECIFICITY GLYCOPROTEIN LECTIN
Ref.: STRUCTURE AND SUGAR-SPECIFICITY OF BASIC WINGED-BEA STRUCTURES OF NEW DISACCHARIDE COMPLEXES AND A COMP STUDY WITH OTHER KNOWN DISACCHARIDE COMPLEXES OF TH ACTA CRYSTALLOGR.,SECT.D V. 64 730 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BMA C:504;
Invalid;
none;
submit data
180.156 C6 H12 O6 C([C@...
CA A:303;
B:303;
C:303;
D:303;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
40.078 Ca [Ca+2...
GLA EGA A:308;
B:307;
C:303;
D:308;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
370.351 n/a O(C1O...
MN A:300;
B:300;
C:300;
D:300;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
54.938 Mn [Mn+2...
NAG C:501;
Part of Protein;
none;
submit data
221.208 C8 H15 N O6 CC(=O...
NAG FUC A:501;
B:501;
C:601;
D:501;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
367.351 n/a O=C(N...
NAG FUC NAG A:601;
D:601;
Part of Protein;
Part of Protein;
none;
none;
submit data n/a n/a n/a n/a
NAG NAG B:601;
Part of Protein;
none;
submit data
408.404 n/a O=C(N...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2D3S 2.35 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF BASIC WINGED BEAN LECTIN WITH TN-ANTIGE PSOPHOCARPUS TETRAGONOLOBUS LEGUME LECTIN GLYCOSYLATED PROTEIN AGGLUTININ TN-ANTIGENBINDING PROTEIN
Ref.: STRUCTURAL BASIS FOR THE SPECIFICITY OF BASIC WINGE LECTIN FOR THE TN-ANTIGEN: A CRYSTALLOGRAPHIC, THER AND MODELLING STUDY FEBS LETT. V. 579 6775 2005
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 473 families.
1 2DTW - 2GS C7 H14 O6 CO[C@@H]1[....
2 1WBL - AMG C7 H14 O6 CO[C@@H]1[....
3 2ZMK - GLA EGA n/a n/a
4 2D3S - TNR C11 H20 N2 O8 CC(=O)N[C@....
70% Homology Family (16)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 355 families.
1 1V00 - LAT C12 H22 O11 C([C@@H]1[....
2 3N3H - CIT C6 H8 O7 C(C(=O)O)C....
3 3N36 - GLA C6 H12 O6 C([C@@H]1[....
4 1AX0 Ka = 1340 M^-1 A2G C8 H15 N O6 CC(=O)N[C@....
5 1UZY - GAL BGC n/a n/a
6 1LTE - BGC GAL n/a n/a
7 1AX1 Ka = 1940 M^-1 BGC GAL n/a n/a
8 1AX2 Ka = 9730 M^-1 NDG GAL n/a n/a
9 1GZC Kd = 0.32 mM LAT C12 H22 O11 C([C@@H]1[....
10 3N35 - A2G C8 H15 N O6 CC(=O)N[C@....
11 1AXZ Ka = 1570 M^-1 GAL C6 H12 O6 C([C@@H]1[....
12 1GZ9 Kd = 0.31 mM FUC LAT n/a n/a
13 2DTW - 2GS C7 H14 O6 CO[C@@H]1[....
14 1WBL - AMG C7 H14 O6 CO[C@@H]1[....
15 2ZMK - GLA EGA n/a n/a
16 2D3S - TNR C11 H20 N2 O8 CC(=O)N[C@....
50% Homology Family (59)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 272 families.
1 5T54 Kd = 0.87 nM A2G GLA FUC n/a n/a
2 5T5J Kd = 0.73 nM ACA SER SER VAL GLY A2G n/a n/a
3 5T52 Kd = 0.54 nM NGA C8 H15 N O6 CC(=O)N[C@....
4 5T5L Kd = 0.73 nM ACE SER SER VAL GLY A2G n/a n/a
5 5T5P Kd = 0.71 nM ACE SER THR VAL GLY A2G n/a n/a
6 1FNZ - A2G C8 H15 N O6 CC(=O)N[C@....
7 1S1A - MAN MMA n/a n/a
8 2ARB Ka = 26000 M^-1 NAG MAN n/a n/a
9 1N3Q - GLC BDF n/a n/a
10 2AR6 Ka = 63000 M^-1 NAG MAN MAN MAN NAG n/a n/a
11 1N3O - GYP C7 H14 O6 CO[C@@H]1[....
12 1N3P - GLC FRU n/a n/a
13 2ARX - MAN MAN n/a n/a
14 2ARE Ka = 1900 M^-1 MAN C6 H12 O6 C([C@@H]1[....
15 1LED - FUC GAL MAG FUC n/a n/a
16 1GSL - FUC GAL MAG FUC n/a n/a
17 1V00 - LAT C12 H22 O11 C([C@@H]1[....
18 3N3H - CIT C6 H8 O7 C(C(=O)O)C....
19 3N36 - GLA C6 H12 O6 C([C@@H]1[....
20 1AX0 Ka = 1340 M^-1 A2G C8 H15 N O6 CC(=O)N[C@....
21 1UZY - GAL BGC n/a n/a
22 1LTE - BGC GAL n/a n/a
23 1AX1 Ka = 1940 M^-1 BGC GAL n/a n/a
24 1AX2 Ka = 9730 M^-1 NDG GAL n/a n/a
25 1GZC Kd = 0.32 mM LAT C12 H22 O11 C([C@@H]1[....
26 3N35 - A2G C8 H15 N O6 CC(=O)N[C@....
27 1AXZ Ka = 1570 M^-1 GAL C6 H12 O6 C([C@@H]1[....
28 1GZ9 Kd = 0.31 mM FUC LAT n/a n/a
29 3ZYR Kd = 4.6 uM ASN NAG NAG BMA MAN MAN NAG NAG n/a n/a
30 3ZVX - MAN MAN MAN n/a n/a
31 5KXE Kd = 5.45 uM 6Y2 C22 H31 N3 O13 CC(=O)N[C@....
32 5KXB - NGA C8 H15 N O6 CC(=O)N[C@....
33 5KXC - 6Y2 C22 H31 N3 O13 CC(=O)N[C@....
34 5KXD - 6Y2 C22 H31 N3 O13 CC(=O)N[C@....
35 4WV8 - LBT C12 H22 O11 C([C@@H]1[....
36 4U2A - A2G C8 H15 N O6 CC(=O)N[C@....
37 4U36 - TNR C11 H20 N2 O8 CC(=O)N[C@....
38 1JXN - MFU C7 H14 O5 C[C@H]1[C@....
39 3WCS - MAN NAG GAL n/a n/a
40 3WOG - MAN NAG n/a n/a
41 5EYX - MDM C13 H24 O11 CO[C@@H]1[....
42 5EYY - MDM C13 H24 O11 CO[C@@H]1[....
43 2BQP - GLC C6 H12 O6 C([C@@H]1[....
44 5T7P - XMM C14 H15 Br Cl N O6 c1cc(c(c2c....
45 2DVA - GAL MGC n/a n/a
46 2DV9 - GAL GAL n/a n/a
47 1V6K - GAL GLC n/a n/a
48 1V6L - GAL BGC n/a n/a
49 2DVD - GAL GAL n/a n/a
50 2TEP - GAL NGA n/a n/a
51 2DVB - GAL C6 H12 O6 C([C@@H]1[....
52 1V6I - GAL GLC n/a n/a
53 2PEL Ki = 1.37 mM LAT C12 H22 O11 C([C@@H]1[....
54 1G9F - GAL NAG GAL NAG GAL n/a n/a
55 2DTW - 2GS C7 H14 O6 CO[C@@H]1[....
56 1WBL - AMG C7 H14 O6 CO[C@@H]1[....
57 2ZMK - GLA EGA n/a n/a
58 2D3S - TNR C11 H20 N2 O8 CC(=O)N[C@....
59 2FMD - MAN MAN n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GLA EGA; Similar ligands found: 270
No: Ligand ECFP6 Tc MDL keys Tc
1 GLA EGA 1 1
2 GLA GAL BGC 5VQ 0.727273 0.945946
3 MAL EDO 0.716981 0.891892
4 GLA GAL GLC NBU 0.689655 0.897436
5 LAT GLA 0.68 0.942857
6 MMA MAN 0.673077 0.944444
7 DR5 0.673077 0.944444
8 LMT 0.666667 0.833333
9 LMU 0.666667 0.833333
10 UMQ 0.666667 0.833333
11 DMU 0.666667 0.833333
12 GLC GLC GLC GLC GLC GLC GLC GLC 0.648148 0.942857
13 GLC GAL GAL 0.648148 0.942857
14 MAN BMA BMA BMA BMA 0.648148 0.942857
15 GLC BGC BGC BGC BGC BGC 0.648148 0.942857
16 BMA BMA BMA 0.648148 0.942857
17 CTT 0.648148 0.942857
18 DXI 0.648148 0.942857
19 GLC BGC BGC 0.648148 0.942857
20 MT7 0.648148 0.942857
21 MTT 0.648148 0.942857
22 BGC GLC GLC GLC 0.648148 0.942857
23 GAL GAL GAL 0.648148 0.942857
24 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.648148 0.942857
25 GLA GAL GLC 0.648148 0.942857
26 BGC GLC GLC GLC GLC 0.648148 0.942857
27 MAN MAN BMA BMA BMA BMA 0.648148 0.942857
28 B4G 0.648148 0.942857
29 CEX 0.648148 0.942857
30 CTR 0.648148 0.942857
31 GLC BGC BGC BGC BGC 0.648148 0.942857
32 BMA BMA BMA BMA BMA BMA 0.648148 0.942857
33 BGC GLC GLC 0.648148 0.942857
34 BMA MAN BMA 0.648148 0.942857
35 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.648148 0.942857
36 MLR 0.648148 0.942857
37 BGC BGC BGC BGC BGC BGC 0.648148 0.942857
38 CE6 0.648148 0.942857
39 CE5 0.648148 0.942857
40 BGC BGC BGC GLC 0.648148 0.942857
41 GLC GLC GLC GLC GLC 0.648148 0.942857
42 CEY 0.648148 0.942857
43 CT3 0.648148 0.942857
44 BGC GLC GLC GLC GLC GLC GLC 0.648148 0.942857
45 MAN BMA BMA 0.648148 0.942857
46 GLC BGC GLC 0.648148 0.942857
47 GLC GLC GLC GLC GLC GLC GLC 0.648148 0.942857
48 BMA BMA BMA BMA BMA 0.648148 0.942857
49 GLC GLC BGC GLC GLC GLC GLC 0.648148 0.942857
50 GLC GLC BGC 0.648148 0.942857
51 CE8 0.648148 0.942857
52 GLC GLC GLC GLC GLC GLC 0.639344 0.942857
53 B2G 0.634615 0.942857
54 LBT 0.634615 0.942857
55 CBK 0.634615 0.942857
56 N9S 0.634615 0.942857
57 MAL 0.634615 0.942857
58 BMA BMA 0.634615 0.942857
59 GLC GAL 0.634615 0.942857
60 MAL MAL 0.634615 0.916667
61 GLA GAL 0.634615 0.942857
62 BMA GAL 0.634615 0.942857
63 GLA GLA 0.634615 0.942857
64 GAL BGC 0.634615 0.942857
65 CBI 0.634615 0.942857
66 GLC BGC 0.634615 0.942857
67 BGC GLC 0.634615 0.942857
68 GAL GLC 0.634615 0.942857
69 MAB 0.634615 0.942857
70 BGC BMA 0.634615 0.942857
71 LAT 0.634615 0.942857
72 BGC GAL 0.634615 0.942857
73 MAN BMA BMA BMA BMA BMA 0.631579 0.916667
74 BMA BMA BMA BMA BMA BMA MAN 0.631579 0.916667
75 BGC BGC GLC 0.603448 0.942857
76 6UZ 0.584615 0.804878
77 GAL BGC NAG GAL 0.571429 0.73913
78 BMA BMA GLA BMA BMA 0.560606 0.942857
79 MA4 0.557143 0.846154
80 BGC BGC BGC BGC BGC BGC BGC BGC 0.555556 0.942857
81 BGC BGC BGC BGC 0.555556 0.942857
82 GLC GLC GLC BGC 0.545455 0.942857
83 CM5 0.542857 0.846154
84 GLA GAL BGC 0.540984 0.942857
85 GLA GAL GAL 0.540984 0.942857
86 GLC GLC XYP 0.538462 0.942857
87 U63 0.534483 0.846154
88 G2F BGC BGC BGC BGC BGC 0.53125 0.825
89 GLA MBG 0.527273 0.944444
90 2M4 0.527273 0.942857
91 MAN MAN 0.527273 0.942857
92 BGC BGC 0.527273 0.942857
93 MVP 0.52459 0.702128
94 TRE 0.520833 0.942857
95 M3M 0.517857 0.942857
96 LB2 0.517857 0.942857
97 MAN GLC 0.517857 0.942857
98 G3I 0.515152 0.733333
99 OXZ BGC BGC 0.515152 0.66
100 G2I 0.515152 0.733333
101 LSE 0.514706 0.693878
102 BMA BMA MAN 0.508475 0.916667
103 GAL FUC 0.508475 0.942857
104 GAL NDG 0.507937 0.73913
105 NLC 0.507937 0.73913
106 NDG GAL 0.507937 0.73913
107 SOR GLC GLC 0.507463 0.916667
108 10M 0.507246 0.777778
109 GLC GLC XYS 0.5 0.916667
110 SOR GLC GLC GLC 0.492754 0.916667
111 BMA MAN 0.491525 0.864865
112 8VZ 0.484375 0.68
113 ABD 0.480519 0.755556
114 BGC BGC SGC MGL 0.479452 0.871795
115 MGL SGC GLC GLC 0.479452 0.871795
116 NPJ 0.478873 0.6
117 LAT SPH DAO 0.47619 0.648148
118 LAT SPH OLA 0.47619 0.648148
119 BGC BGC BGC ASO BGC BGC ASO 0.47541 0.942857
120 GLC BGC BGC BGC 0.47541 0.942857
121 GLC BGC BGC BGC BGC BGC BGC 0.47541 0.942857
122 BGC BGC BGC BGC BGC 0.47541 0.942857
123 BGC BGC BGC 0.47541 0.942857
124 BGC BGC BGC GLC BGC BGC 0.47541 0.942857
125 GAL MBG 0.474576 0.944444
126 MDM 0.474576 0.944444
127 M13 0.474576 0.944444
128 BGC BGC G2F SHG 0.472973 0.804878
129 MAN NAG GAL 0.472222 0.73913
130 GAL NAG MAN 0.472222 0.73913
131 BMA MAN MAN 0.46875 0.942857
132 VAM 0.467742 0.871795
133 MAN MAN BMA 0.467742 0.942857
134 BGC BGC BGC XYS BGC BGC 0.467532 0.891892
135 XYS BGC BGC XYS BGC XYS BGC BGC BGC 0.467532 0.891892
136 XYS BGC BGC BGC BGC XYS BGC BGC BGC 0.467532 0.891892
137 DOM 0.466667 0.891892
138 RCB 0.465753 0.6
139 GLO GLC GLC 0.465753 0.891892
140 GTM BGC BGC 0.464789 0.871795
141 FUC BGC GAL 0.462687 0.971429
142 GLC GLC BGC XYS BGC XYS 0.460526 0.891892
143 FMO 0.460317 0.825
144 NGA GAL BGC 0.458333 0.73913
145 GAL NGA GLA BGC GAL 0.455696 0.73913
146 GLO GLC GLC GLC 0.453333 0.891892
147 5QP 0.451613 0.837838
148 FRU GAL 0.451613 0.8
149 BMA FRU 0.451613 0.8
150 RZM 0.45 0.659574
151 BGC BGC BGC XYS GAL 0.448718 0.891892
152 GLC GAL NAG GAL 0.448718 0.73913
153 GAL BGC BGC XYS 0.445946 0.891892
154 NAG GAL GAL 0.444444 0.73913
155 BGC 18C GAL 0.444444 0.625
156 GLA GAL NAG 0.444444 0.73913
157 LAT SPH OCA 0.444444 0.625
158 MAN BMA NAG 0.444444 0.73913
159 MAN MNM 0.444444 0.717391
160 4MU BGC BGC 0.443038 0.772727
161 LAT NAG GAL 0.441558 0.73913
162 GAL NAG GAL BGC 0.441558 0.73913
163 BGC GAL NAG GAL 0.441558 0.73913
164 GLC GLC GLC GLC 0.441176 0.942857
165 MAN MMA MAN 0.441176 0.944444
166 NAG BMA 0.441176 0.66
167 BGC GLA GAL FUC 0.44 0.971429
168 GAL A2G 0.439394 0.73913
169 GAL NGA 0.439394 0.73913
170 A2G GAL 0.439394 0.73913
171 GAL MGC 0.439394 0.708333
172 RGG 0.438596 0.833333
173 4MU BGC BGC BGC BGC 0.4375 0.772727
174 GAL GAL GLC EMB MEC 0.436782 0.660377
175 M5S 0.43662 0.942857
176 MAN BMA MAN MAN MAN 0.43662 0.942857
177 NAG GAL GAL NAG GAL 0.435897 0.693878
178 GLC GLC G6D ACI GLC GLC GLC 0.435294 0.790698
179 BGC BGC XYS BGC 0.434211 0.891892
180 OPM MAN MAN 0.432432 0.853659
181 DEG 0.431034 0.820513
182 ABL 0.430769 0.673469
183 CGC 0.430769 0.888889
184 GLC GAL FUC 0.428571 0.971429
185 FUC LAT 0.428571 0.971429
186 NOY BGC 0.428571 0.717391
187 BGC GAL FUC 0.428571 0.971429
188 GAL NGT 0.428571 0.666667
189 NGT GAL 0.428571 0.666667
190 LAT FUC 0.428571 0.971429
191 FUC GAL GLC 0.428571 0.971429
192 FUC GAL GLA 0.426471 0.971429
193 GAL GAL FUC 0.426471 0.971429
194 GLA GLA FUC 0.426471 0.971429
195 FUC GLA GLA 0.426471 0.971429
196 GAL GAL SO4 0.426471 0.673469
197 GLA GAL FUC 0.426471 0.971429
198 NGA GLA GAL BGC 0.425 0.73913
199 ERA BGC GAL 0.424242 0.614035
200 AMG 0.423077 0.861111
201 GYP 0.423077 0.861111
202 MBG 0.423077 0.861111
203 MMA 0.423077 0.861111
204 MAN MAN MAN MAN 0.422535 0.942857
205 MAN MAN BMA MAN 0.422535 0.942857
206 9MR 0.421875 0.711111
207 IFM BMA 0.421875 0.711111
208 BGC OXZ 0.421875 0.64
209 ISX 0.421875 0.727273
210 BMA IFM 0.421875 0.711111
211 IFM BGC 0.421875 0.711111
212 GLC G6D ACI GLC 0.421687 0.790698
213 GLC ACI GLD GLC 0.421687 0.790698
214 GLC G6D ADH GLC 0.421687 0.790698
215 GLC ACI G6D BGC 0.421687 0.790698
216 BNG 0.419355 0.785714
217 BOG 0.419355 0.785714
218 HSJ 0.419355 0.785714
219 QV4 0.418605 0.73913
220 GAL NAG GAL NAG GAL NAG 0.417722 0.68
221 NAG GAL GAL NAG 0.417722 0.693878
222 GLC DMJ 0.415385 0.695652
223 NOJ GLC 0.415385 0.695652
224 MBG A2G 0.414286 0.708333
225 A2G MBG 0.414286 0.708333
226 MAN MAN MAN GLC 0.414286 0.942857
227 6SA 0.412371 0.73913
228 BGC BGC BGC XYS BGC XYS GAL 0.411765 0.891892
229 GAL BGC BGC BGC XYS BGC XYS 0.411765 0.891892
230 GAL NAG GAL 0.410256 0.708333
231 HEX GLC 0.409836 0.761905
232 BHG 0.409836 0.761905
233 MLB 0.409836 0.942857
234 BGC GLA 0.409836 0.942857
235 GLA BGC 0.409836 0.942857
236 GAL GAL 0.409836 0.942857
237 GLA BMA 0.409836 0.942857
238 JZR 0.409836 0.761905
239 BMA GLA 0.409836 0.942857
240 MAN BMA 0.409836 0.942857
241 GLC HEX 0.409836 0.761905
242 GLA GLC 0.409836 0.942857
243 LAK 0.409836 0.942857
244 GLC BGC BGC BGC XYS BGC XYS XYS 0.409639 0.868421
245 GLC AGL GLC HMC 0.409091 0.723404
246 IGC 0.408163 0.625
247 LGN 0.408163 0.625
248 MAN DGO 0.40625 0.864865
249 MAN H1M MAN 0.405405 0.871795
250 NAG NAG BMA 0.405063 0.641509
251 NAG NDG BMA 0.405063 0.641509
252 NAG MAN GAL MAN MAN NAG GAL 0.404494 0.693878
253 T6P 0.403226 0.733333
254 KGM 0.403226 0.785714
255 B7G 0.403226 0.785714
256 MAN MAN MAN BMA MAN 0.402597 0.942857
257 GLC SGC SGC MGL 0.402597 0.871795
258 BGC BGC XYS BGC XYS BGC XYS 0.4 0.891892
259 BGC BGC BGC XYS BGC XYS XYS 0.4 0.891892
260 GLC GLC AGL HMC GLC 0.4 0.73913
261 GLF B8D 0.4 0.780488
262 NAG BMA MAN MAN MAN MAN 0.4 0.73913
263 ARE 0.4 0.73913
264 GLC BGC BGC XYS BGC XYS XYS 0.4 0.891892
265 GLC GLC ACI G6D GLC GLC 0.4 0.73913
266 BMA BMA BMA BMA GLA BMA GLA 0.4 0.804878
267 GLC GLC DAF BGC 0.4 0.73913
268 WZ3 0.4 0.918919
269 ACR GLC GLC GLC 0.4 0.73913
270 AAO 0.4 0.73913
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2D3S; Ligand: TNR; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2d3s.bio2) has 17 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 2D3S; Ligand: TNR; Similar sites found: 19
This union binding pocket(no: 2) in the query (biounit: 2d3s.bio2) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5BUK FAD 0.04188 0.40215 2.89256
2 3E1T FAD 0.03572 0.40488 3.30579
3 4M52 FAD 0.04126 0.40086 3.30579
4 3LKF PC 0.01335 0.40549 3.71901
5 3HQP OXL 0.02449 0.40057 3.71901
6 1WB4 SXX 0.01739 0.40146 4.13223
7 5EB4 FAD 0.01207 0.42604 4.54545
8 3W8X FAD 0.02607 0.41268 4.54545
9 4BV6 FAD 0.02572 0.41044 4.54545
10 3OBT SLB 0.0238 0.40118 5.3719
11 2Z3Y F2N 0.04193 0.40132 6.19835
12 2HYR BGC GLC 0.00852 0.41701 6.55738
13 2GUE NAG 0.01311 0.41115 6.55738
14 2GUC MAN 0.01 0.40637 6.55738
15 2NU5 NAG 0.01055 0.40396 6.55738
16 4ZGR NGA GAL 0.0154 0.40205 7.85124
17 1RBL CAP 0.01142 0.40643 13.2231
18 3QVP FAD 0.0192 0.41859 14.4628
19 2DUR MAN MAN 0.01386 0.40119 28.9256
Pocket No.: 3; Query (leader) PDB : 2D3S; Ligand: TNR; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2d3s.bio1) has 17 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2D3S; Ligand: TNR; Similar sites found: 12
This union binding pocket(no: 4) in the query (biounit: 2d3s.bio1) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1RZM E4P 0.01014 0.42001 2.06612
2 2C0U FAD NBT 0.03286 0.40143 3.30579
3 3GD4 FAD 0.03204 0.40198 4.54545
4 3F3E LEU 0.03089 0.40277 4.95868
5 2YGM GLA NAG GAL FUC 0.005615 0.42241 6.19835
6 3AD8 NAD 0.02467 0.40461 6.19835
7 4S00 AKR 0.01604 0.40635 7.85124
8 1DQS NAD 0.03711 0.4015 7.85124
9 4GUT FAD 0.044 0.40259 10.4839
10 4HSU FAD 0.04435 0.40087 10.4839
11 3LAD FAD 0.02619 0.4109 10.7438
12 2F5Z FAD 0.02819 0.41012 12.5
Feedback