Receptor
PDB id Resolution Class Description Source Keywords
2a5c 2.5 Å NON-ENZYME: BINDING STRUCTURE OF AVIDIN IN COMPLEX WITH THE LIGAND 8-OXODEOXYADE GALLUS GALLUS AVIDIN DAMAGED DNA 8-OXODEOXYADENOSINE UNKNOWN FUNCTION
Ref.: RECOGNITION OF OXIDATIVELY MODIFIED BASES WITHIN TH BIOTIN-BINDING SITE OF AVIDIN. J.MOL.BIOL. V. 357 263 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
8DA A:303;
B:201;
 Valid;
Valid;
 none;
none;
 Kd = 24 uM
269.257 C10 H15 N5 O4 C1[C@...
NAG A:302;
B:301;
 Invalid;
Invalid;
 none;
none;
 submit data
221.208 C8 H15 N O6 CC(=O...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3VHH 2.26 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF DIME-BIOTIN-AVIDIN COMPLEX GALLUS GALLUS BETA BARREL BIOTIN-BINDING PROTEIN
Ref.: RATIONAL DEVELOPMENT OF CAGED-BIOTIN PROTEIN-LABELI AND SOME APPLICATIONS IN LIVE CELLS CHEM.BIOL. V. 18 1261 2011
Members (12)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 552 families.
1 3VHH Ka = 400000000 M^-1 VHH C12 H20 N2 O3 S CN1[C@H]2C....
2 2A5B Kd = 117 uM 8HG C10 H13 N5 O5 C1[C@@H]([....
3 3VHM Ka = 15000 M^-1 NPK C20 H23 N3 O9 S C[C@H](c1c....
4 5IRU - B9P C26 H24 N2 O2 S c1cc2ccc3c....
5 1LDO - SNR C9 H14 N2 O3 S C1[C@H]2[C....
6 2A5C Kd = 24 uM 8DA C10 H15 N5 O4 C1[C@H]([C....
7 3VGW Ka = 200000 M^-1 NVZ C12 H18 N2 O4 S CC(=O)N1[C....
8 1IJ8 - BNI C16 H20 N4 O4 S c1cc(ccc1N....
9 3VHI Ka = 2300000 M^-1 VHI C18 H22 N2 O5 S c1ccc(cc1)....
10 2A8G Kd = 205 uM GNG C10 H13 N5 O4 c1nc2c(n1[....
11 4I60 Kd = 1.87 uM B1R C20 H16 N2 O2 Ru S C1[C@H]2[C....
12 5IRW - D9P C26 H26 N2 O2 C[C@H]1[C@....
70% Homology Family (24)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 426 families.
1 1Y55 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
2 1Y52 Kd = 0.000000064 M BTN C10 H16 N2 O3 S C1[C@H]2[C....
3 2FHN - BNI C16 H20 N4 O4 S c1cc(ccc1N....
4 2OF8 - BNI C16 H20 N4 O4 S c1cc(ccc1N....
5 2FHL - BNI C16 H20 N4 O4 S c1cc(ccc1N....
6 2OFB - BNI C16 H20 N4 O4 S c1cc(ccc1N....
7 1WBI - BTN C10 H16 N2 O3 S C1[C@H]2[C....
8 3VHH Ka = 400000000 M^-1 VHH C12 H20 N2 O3 S CN1[C@H]2C....
9 2A5B Kd = 117 uM 8HG C10 H13 N5 O5 C1[C@@H]([....
10 3VHM Ka = 15000 M^-1 NPK C20 H23 N3 O9 S C[C@H](c1c....
11 5IRU - B9P C26 H24 N2 O2 S c1cc2ccc3c....
12 1LDO - SNR C9 H14 N2 O3 S C1[C@H]2[C....
13 2A5C Kd = 24 uM 8DA C10 H15 N5 O4 C1[C@H]([C....
14 3VGW Ka = 200000 M^-1 NVZ C12 H18 N2 O4 S CC(=O)N1[C....
15 1IJ8 - BNI C16 H20 N4 O4 S c1cc(ccc1N....
16 3VHI Ka = 2300000 M^-1 VHI C18 H22 N2 O5 S c1ccc(cc1)....
17 2A8G Kd = 205 uM GNG C10 H13 N5 O4 c1nc2c(n1[....
18 4I60 Kd = 1.87 uM B1R C20 H16 N2 O2 Ru S C1[C@H]2[C....
19 5IRW - D9P C26 H26 N2 O2 C[C@H]1[C@....
20 2C1S - BSO C10 H16 N2 O4 S C1[C@H]2[C....
21 2C1Q Kd ~ 0.1 pM BTN C10 H16 N2 O3 S C1[C@H]2[C....
22 2UYW - BTN C10 H16 N2 O3 S C1[C@H]2[C....
23 2UZ2 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
24 4BCS Kd = 103 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
50% Homology Family (123)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 322 families.
1 2G5L - FME ASP VAL GLU ALA TRP LEU n/a n/a
2 3WZO - ZOE C16 H27 N3 O5 S C1[C@H]2[C....
3 2RTM - IMI C10 H17 N3 O2 S C1[C@H]2[C....
4 4Y59 Kd = 5.8 uM T21 C14 H8 F3 N O2 c1cc(cc(c1....
5 1NQM - BTN C10 H16 N2 O3 S C1[C@H]2[C....
6 1VWQ - HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
7 1NC9 - IMI C10 H17 N3 O2 S C1[C@H]2[C....
8 2RTI - GLL C4 H6 N4 O2 C12C(NC(=O....
9 5B5G Kd = 5.6 uM 6FX C14 H10 N2 O4 COC(=O)c1c....
10 4Y5D Kd = 1.2 uM MT6 C15 H11 N O4 COC(=O)c1c....
11 1SRJ - NAB C17 H12 N2 O3 c1ccc2c(c1....
12 4CPF - LH3 C32 H34 N4 O6 S COC(=O)c1c....
13 1NDJ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
14 2IZL Kd = 1 uM IMI C10 H17 N3 O2 S C1[C@H]2[C....
15 2RTJ - GLL C4 H6 N4 O2 C12C(NC(=O....
16 1SWR Kd = 0.12 uM BTN C10 H16 N2 O3 S C1[C@H]2[C....
17 1SWE - BTN C10 H16 N2 O3 S C1[C@H]2[C....
18 1SRF - MTB C17 H18 N2 O3 CC(C)(C)c1....
19 1SLE Kd = 670 nM ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2 n/a n/a
20 4CPE - LUV C31 H34 N4 O3 S c1ccc(cc1)....
21 2RTE - BTN C10 H16 N2 O3 S C1[C@H]2[C....
22 3WZP - ZOF C16 H28 N4 O3 S [H]/N=C/1N....
23 1VWF Kd = 2200 nM ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2 n/a n/a
24 2RTO - IMI C10 H17 N3 O2 S C1[C@H]2[C....
25 1SWT - BTN C10 H16 N2 O3 S C1[C@H]2[C....
26 1SWP Ka = 100000000 M^-1 BTN C10 H16 N2 O3 S C1[C@H]2[C....
27 1VWG - ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2 n/a n/a
28 6M9B - BTN C10 H16 N2 O3 S C1[C@H]2[C....
29 2RTF - BTN C10 H16 N2 O3 S C1[C@H]2[C....
30 1VWC - ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
31 1STS Kd = 10 uM PHE CYS HIS PRO GLN ASN THR NH2 n/a n/a
32 2IZI - BTN C10 H16 N2 O3 S C1[C@H]2[C....
33 1VWN Kd = 1500 nM ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
34 2IZF - BTN C10 H16 N2 O3 S C1[C@H]2[C....
35 1SWD - BTN C10 H16 N2 O3 S C1[C@H]2[C....
36 1LCW - SHM C11 H18 N2 O3 S C1[C@H]2[C....
37 1RXK - BNI C16 H20 N4 O4 S c1cc(ccc1N....
38 1SRG Ka = 200000 M^-1 MHB C14 H12 N2 O3 Cc1cc(ccc1....
39 1I9H - BNI C16 H20 N4 O4 S c1cc(ccc1N....
40 1VWR - HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
41 2IZH - BTN C10 H16 N2 O3 S C1[C@H]2[C....
42 2RTP - IMI C10 H17 N3 O2 S C1[C@H]2[C....
43 1SLD Kd = 270 nM ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
44 1KL3 Kd = 1.37 uM ASN TRP SER HIS PRO GLN PHE GLU LYS n/a n/a
45 1DF8 Kd = 0.2 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
46 3T6F - BTN C10 H16 N2 O3 S C1[C@H]2[C....
47 1VWO - ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2 n/a n/a
48 1VWK - HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
49 1SLG Kd = 125 uM PHE SER HIS PRO GLN ASN THR n/a n/a
50 2RTQ - IMI C10 H17 N3 O2 S C1[C@H]2[C....
51 1N43 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
52 3WZN - BTN C10 H16 N2 O3 S C1[C@H]2[C....
53 1VWD - ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
54 2Y3F - BTN C10 H16 N2 O3 S C1[C@H]2[C....
55 1VWL Kd = 2.33 uM HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
56 1VWA - PHE SER HIS PRO GLN ASN THR n/a n/a
57 2IZG - BTN C10 H16 N2 O3 S C1[C@H]2[C....
58 3MG5 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
59 1SRI Ka = 1200000 M^-1 DMB C15 H14 N2 O3 Cc1cc(cc(c....
60 1KL5 Kd = 1.02 uM ASN TRP SER HIS PRO GLN PHE GLU LYS n/a n/a
61 1VWH - ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2 n/a n/a
62 1PTS - PHE SER HIS PRO GLN ASN THR n/a n/a
63 1MK5 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
64 1LUQ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
65 1VWB - ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
66 2IZK - GLL C4 H6 N4 O2 C12C(NC(=O....
67 1VWE - ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
68 2RTN - IMI C10 H17 N3 O2 S C1[C@H]2[C....
69 1MEP - BTN C10 H16 N2 O3 S C1[C@H]2[C....
70 3WYP - BTN C10 H16 N2 O3 S C1[C@H]2[C....
71 2RTL - IMI C10 H17 N3 O2 S C1[C@H]2[C....
72 1N9M - BTN C10 H16 N2 O3 S C1[C@H]2[C....
73 1VWI - HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
74 2IZJ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
75 1STR Kd = 17 uM ACE CYS HIS PRO GLN ASN THR NH2 n/a n/a
76 1VWP - ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2 n/a n/a
77 1VWJ - HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
78 1LCV - SNR C9 H14 N2 O3 S C1[C@H]2[C....
79 1RSU Kd = 72 uM SER ASN TRP SER HIS PRO GLN PHE GLU LYS n/a n/a
80 2RTH - GLL C4 H6 N4 O2 C12C(NC(=O....
81 5B5F Kd = 5.6 uM 6F3 C14 H12 N2 O4 S CNS(=O)(=O....
82 2F01 Kd ~ 0.1 pM BTN C10 H16 N2 O3 S C1[C@H]2[C....
83 1VWM - ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
84 2GH7 Kd ~ 0.1 pM BTN C10 H16 N2 O3 S C1[C@H]2[C....
85 4JNJ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
86 2JGS Kd = 0.000000064 M BTN C10 H16 N2 O3 S C1[C@H]2[C....
87 3SZJ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
88 3T2W Kd = 0.000000064 M BTN C10 H16 N2 O3 S C1[C@H]2[C....
89 3RDQ Kd = 0.49 nM DTB C10 H18 N2 O3 C[C@H]1[C@....
90 3RDO Kd = 0.14 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
91 3RDM Kd = 0.14 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
92 2OF8 - BNI C16 H20 N4 O4 S c1cc(ccc1N....
93 2FHL - BNI C16 H20 N4 O4 S c1cc(ccc1N....
94 2OFB - BNI C16 H20 N4 O4 S c1cc(ccc1N....
95 3X00 Kd = 0.83 nM ZOF ZOF EDN n/a n/a
96 2A5C Kd = 24 uM 8DA C10 H15 N5 O4 C1[C@H]([C....
97 3VGW Ka = 200000 M^-1 NVZ C12 H18 N2 O4 S CC(=O)N1[C....
98 1IJ8 - BNI C16 H20 N4 O4 S c1cc(ccc1N....
99 3VHI Ka = 2300000 M^-1 VHI C18 H22 N2 O5 S c1ccc(cc1)....
100 2A8G Kd = 205 uM GNG C10 H13 N5 O4 c1nc2c(n1[....
101 4I60 Kd = 1.87 uM B1R C20 H16 N2 O2 Ru S C1[C@H]2[C....
102 5IRW - D9P C26 H26 N2 O2 C[C@H]1[C@....
103 5F2B - 9RU C31 H41 Cl2 N5 O2 Ru S Cc1cc(c(c(....
104 4OKA - 5IR C18 H26 Ir N5 O4 S2 c1cc(ccc1N....
105 6AUL - BTN C10 H16 N2 O3 S C1[C@H]2[C....
106 4GJV - 0OD C21 H32 Cl3 N3 O2 Rh S CC12=C3([R....
107 6ESU Ki = 249.3 mM 6IR C18 H27 N5 O4 S2 c1cc(ccc1N....
108 4GJS - 0OD C21 H32 Cl3 N3 O2 Rh S CC12=C3([R....
109 2WPU Kd < 60 nM KYT C24 H39 Cl N5 O2 Ru S CC1=[CH]2C....
110 3PK2 - 4IR C28 H45 Cl Ir N5 O4 S2 C[CH]12[CH....
111 6VJL Kd = 0.000000064 M BTN C10 H16 N2 O3 S C1[C@H]2[C....
112 6ESS - 4IR C28 H45 Cl Ir N5 O4 S2 C[CH]12[CH....
113 2ZSC - BTN C10 H16 N2 O3 S C1[C@H]2[C....
114 3EW2 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
115 5N99 Kd = 61.3 uM ASN GLN DPR TRP GLN n/a n/a
116 4GGZ Kd = 0.066 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
117 2UYW - BTN C10 H16 N2 O3 S C1[C@H]2[C....
118 2UZ2 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
119 4GDA - BTN C10 H16 N2 O3 S C1[C@H]2[C....
120 1SWG Kd = 43.9 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
121 4GD9 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
122 4BCS Kd = 103 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
123 4EKV Kd = 0.000000064 M BTN C10 H16 N2 O3 S C1[C@H]2[C....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: 8DA; Similar ligands found: 2
No: Ligand ECFP6 Tc MDL keys Tc
1 8DA 1 1
2 8HG 0.454545 0.934211
Similar Ligands (3D)
Ligand no: 1; Ligand: 8DA; Similar ligands found: 239
No: Ligand Similarity coefficient
1 3L1 0.9771
2 5AD 0.9385
3 LLT 0.9369
4 8OX 0.9300
5 ADN 0.9265
6 3D1 0.9242
7 X2M 0.9169
8 A 0.9158
9 5V7 0.9137
10 DTR 0.9134
11 HBI 0.9133
12 GNG 0.9128
13 THM 0.9125
14 NOS 0.9105
15 MDR 0.9095
16 3AK 0.9094
17 GMP 0.9091
18 TBN 0.9089
19 96R 0.9088
20 TRP 0.9080
21 EXG 0.9078
22 ETV 0.9068
23 ZIQ 0.9066
24 II4 0.9056
25 CL9 0.9047
26 5F1 0.9037
27 RVE 0.9036
28 NQ7 0.9035
29 CC5 0.9033
30 B86 0.9020
31 MCY 0.9015
32 0GA 0.9014
33 LDC 0.9013
34 Q5M 0.9009
35 AX8 0.9006
36 KF5 0.9002
37 5MD 0.9000
38 5ID 0.8999
39 MPU 0.8996
40 TMC 0.8994
41 2FD 0.8990
42 3BH 0.8988
43 FMC 0.8988
44 GA2 0.8986
45 RAB 0.8980
46 H7S 0.8976
47 FMB 0.8973
48 X0T 0.8970
49 EV2 0.8969
50 XTS 0.8957
51 DBS 0.8947
52 FTU 0.8945
53 EKH 0.8944
54 AC2 0.8941
55 B61 0.8940
56 ITW 0.8933
57 DTE 0.8928
58 ID2 0.8927
59 JY4 0.8919
60 5NB 0.8915
61 4OG 0.8911
62 5FD 0.8905
63 CDY 0.8904
64 0DN 0.8904
65 1ZC 0.8903
66 M3Q 0.8902
67 NEU 0.8898
68 0J4 0.8896
69 7D7 0.8896
70 ALN 0.8895
71 7AP 0.8892
72 MTP 0.8891
73 3DT 0.8889
74 DCF 0.8887
75 78U 0.8882
76 TQU 0.8880
77 H2B 0.8878
78 9UL 0.8873
79 DCZ 0.8873
80 9DI 0.8872
81 BIO 0.8867
82 IMH 0.8864
83 MBY 0.8861
84 RVB 0.8857
85 JMQ 0.8852
86 96U 0.8851
87 QMS 0.8845
88 IQZ 0.8841
89 AGV 0.8840
90 4KL 0.8839
91 UA2 0.8837
92 SCT 0.8837
93 ZYV 0.8836
94 NIY 0.8835
95 KP2 0.8833
96 3J8 0.8831
97 FWD 0.8827
98 ZYW 0.8824
99 19E 0.8823
100 3AD 0.8817
101 3Y7 0.8815
102 FM2 0.8814
103 5BX 0.8812
104 ARJ 0.8809
105 FM1 0.8808
106 A4G 0.8807
107 Z17 0.8806
108 B5A 0.8800
109 LL1 0.8796
110 GZV 0.8794
111 EVO 0.8792
112 XYA 0.8791
113 MTA 0.8790
114 NWW 0.8785
115 HPR 0.8784
116 LTT 0.8780
117 EXR 0.8780
118 PRH 0.8780
119 B52 0.8778
120 5I5 0.8778
121 NEO 0.8778
122 1DA 0.8775
123 5BT 0.8774
124 5N5 0.8772
125 EYY 0.8771
126 7CT 0.8762
127 5JT 0.8761
128 5WN 0.8761
129 1YE 0.8760
130 W8G 0.8756
131 96Z 0.8754
132 TAL 0.8754
133 M5H 0.8753
134 SY4 0.8751
135 EYA 0.8750
136 2FA 0.8749
137 BVD 0.8744
138 3TC 0.8743
139 EXL 0.8739
140 64C 0.8739
141 PUR 0.8737
142 PE2 0.8736
143 IOS 0.8735
144 NOC 0.8734
145 DXK 0.8733
146 3IB 0.8731
147 ARP 0.8728
148 CWD 0.8727
149 6CR 0.8725
150 2K8 0.8723
151 8MO 0.8723
152 VUP 0.8718
153 ACE TRP 0.8717
154 AD3 0.8716
155 5CD 0.8714
156 I59 0.8713
157 EY7 0.8712
158 DIH 0.8706
159 2UD 0.8705
160 Z21 0.8704
161 BA5 0.8703
162 MFR 0.8703
163 JF8 0.8703
164 2L2 0.8703
165 TRF 0.8698
166 5NS 0.8695
167 LP8 0.8692
168 CPW 0.8691
169 AP4 0.8688
170 9CE 0.8686
171 AHU 0.8686
172 DBM 0.8685
173 B56 0.8685
174 A4D 0.8684
175 LTN 0.8684
176 7QV 0.8680
177 NWD 0.8677
178 LZ2 0.8675
179 EYM 0.8672
180 EMO 0.8671
181 AKD 0.8670
182 0FR 0.8669
183 MN QAY 0.8667
184 0HY 0.8664
185 6MD 0.8661
186 DX2 0.8661
187 LFN 0.8658
188 L8J 0.8657
189 22T 0.8653
190 RH1 0.8653
191 64E 0.8651
192 CFE 0.8646
193 3IL 0.8643
194 SYE 0.8643
195 ZON 0.8638
196 VM1 0.8638
197 RFZ 0.8636
198 IM5 0.8636
199 IBM 0.8635
200 NIP 0.8634
201 KED 0.8632
202 2AN 0.8628
203 DNA 0.8625
204 MG7 0.8624
205 54X 0.8623
206 BG6 0.8622
207 7R7 0.8618
208 XIF XYP 0.8613
209 NCV 0.8612
210 Q0K 0.8611
211 DUR 0.8609
212 T28 0.8608
213 P9T 0.8606
214 5NN 0.8606
215 78P 0.8605
216 GTV 0.8604
217 XYS XYP 0.8603
218 6J9 0.8602
219 MUR 0.8596
220 7CI 0.8592
221 FUB FUB 0.8591
222 H5B 0.8591
223 ZME 0.8581
224 774 0.8581
225 F01 0.8576
226 MTH 0.8575
227 MTM 0.8574
228 VYM 0.8573
229 XYP XIF 0.8572
230 THA 0.8567
231 HDU 0.8567
232 GNV 0.8553
233 YKG 0.8550
234 G6P 0.8545
235 TWB 0.8538
236 LIP 0.8538
237 DPT 0.8534
238 WV7 0.8525
239 0Q2 0.8513
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3VHH; Ligand: VHH; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 3vhh.bio1) has 54 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 3VHH; Ligand: VHH; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3vhh.bio1) has 51 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 3VHH; Ligand: VHH; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 3vhh.bio1) has 54 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 3VHH; Ligand: VHH; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 3vhh.bio1) has 50 residues
No: Leader PDB Ligand Sequence Similarity
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