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Receptor
PDB id Resolution Class Description Source Keywords
3AJ4 1 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE PH DOMAIN OF EVECTIN-2 FROM HUMAN C WITH O-PHOSPHO-L-SERINE HOMO SAPIENS ANTIPARALLEL BETA SHEET PROTEIN TRANSPORT
Ref.: INTRACELLULAR PHOSPHATIDYLSERINE IS ESSENTIAL FOR R MEMBRANE TRAFFIC THROUGH ENDOSOMES PROC.NATL.ACAD.SCI.USA V. 108 15846 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
EDO A:112;
B:111;
B:112;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
62.068 C2 H6 O2 C(CO)...
SEP A:111;
Valid;
none;
submit data
185.072 C3 H8 N O6 P C([C@...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3AJ4 1 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE PH DOMAIN OF EVECTIN-2 FROM HUMAN C WITH O-PHOSPHO-L-SERINE HOMO SAPIENS ANTIPARALLEL BETA SHEET PROTEIN TRANSPORT
Ref.: INTRACELLULAR PHOSPHATIDYLSERINE IS ESSENTIAL FOR R MEMBRANE TRAFFIC THROUGH ENDOSOMES PROC.NATL.ACAD.SCI.USA V. 108 15846 2011
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 3AJ4 - SEP C3 H8 N O6 P C([C@@H](C....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 3AJ4 - SEP C3 H8 N O6 P C([C@@H](C....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 3AJ4 - SEP C3 H8 N O6 P C([C@@H](C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SEP; Similar ligands found: 14
No: Ligand ECFP6 Tc MDL keys Tc
1 SEP 1 1
2 3PG 0.515152 0.74359
3 4TP 0.513514 0.833333
4 GSE 0.512195 0.833333
5 DG2 0.459459 0.675
6 DEZ 0.459459 0.707317
7 DER 0.459459 0.707317
8 RGP 0.45 0.871795
9 R10 0.425 0.707317
10 PA5 0.425 0.707317
11 PGA 0.40625 0.710526
12 OSE 0.405405 0.733333
13 LG6 0.404762 0.707317
14 6PG 0.404762 0.707317
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3AJ4; Ligand: SEP; Similar sites found with APoc: 160
This union binding pocket(no: 1) in the query (biounit: 3aj4.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 2ICK DMA None
2 5EOU ATP None
3 1EKX PAL None
4 1SQL GUN None
5 2Y6P CTP None
6 5BSH PRO None
7 1U1W 3HA None
8 5JVB 2PO None
9 4K49 HFQ None
10 1O44 852 None
11 2BTM PGA None
12 3SXS PP2 None
13 6HOY AR6 1.78571
14 5LLT DND 1.78571
15 1QK3 5GP 1.78571
16 4EVQ PHB 1.78571
17 2PTR 2SA 2.67857
18 3R5W F42 2.67857
19 3ZKK XYP XYP XYP XYP 2.67857
20 1OTH PAO 2.67857
21 2OZ5 7XY 2.67857
22 3O3R NAP 2.67857
23 4WW8 VD9 2.67857
24 2FNU PMP UD1 2.67857
25 5FIT AP2 2.67857
26 1JYQ MAZ PTR PTM ASN 3.125
27 1P9B HDA 3.57143
28 2FKF G16 3.57143
29 6CAY ERG 3.57143
30 1KZL CRM 3.57143
31 1SB8 NAD 3.57143
32 3E4O SIN 3.57143
33 2A92 NAI 3.57143
34 2C6Q NDP 3.57143
35 1TD2 PXL 3.57143
36 1IYE PGU 3.57143
37 2C6Q IMP 3.57143
38 3X27 TRP 4.46429
39 1IID NHM 4.46429
40 1JDC GLC GLC GLC GLC 4.46429
41 1CL2 PPG 4.46429
42 5XQL C2E 4.46429
43 3OZG SSI 4.46429
44 1MDZ PLP 4.46429
45 1MDZ DCS 4.46429
46 3WCZ NAP 4.46429
47 2GSD NAD 4.46429
48 5ZA2 NXL 4.46429
49 3M6W SAM 4.46429
50 4INI AMP 4.46429
51 1YQZ FAD 4.46429
52 3OZ2 OZ2 5.35714
53 2BNF UTP 5.35714
54 1WUU ANP 5.35714
55 5KJK SAM 5.35714
56 5KJK 6T1 5.35714
57 5HES 032 5.35714
58 4XQC 13D 5.35714
59 2D4V NAD 5.35714
60 6BYM HC3 5.35714
61 5FFF 5XC 5.35714
62 4HA9 NDP 5.35714
63 5GT9 NAP 5.35714
64 4P7X AKG 5.35714
65 4P7X YCP 5.35714
66 5O2J 2PO 5.35714
67 3R7F CP 5.35714
68 1DUV PSQ 5.35714
69 3KEE 30B 5.35714
70 1LBZ FBP 5.35714
71 3N26 ARG 5.35714
72 2O4C NAD 5.35714
73 2QHD DAO 6.25
74 5NEA 8V8 6.25
75 2H29 DND 6.25
76 3OZV FAD 6.25
77 4GJ3 0XP 6.25
78 4CNE SAH 6.25
79 5F1R 42O 6.25
80 3LL5 IPE 6.25
81 3LL5 ADP 6.25
82 4BI7 PGA 6.25
83 5N6C NAD 6.25
84 5EYW PGA 6.25
85 1G60 SAM 6.25
86 4FN4 NAD 6.25
87 2NTK IMP 6.25
88 3EEL 53T 6.25
89 5AVF TAU 7.14286
90 3MHP FAD 7.14286
91 3VO1 FAD 7.14286
92 5GXU FAD 7.14286
93 5D63 FUC GAL GLA 7.14286
94 5X2Z 3LM 7.14286
95 4L9Z OXL 7.14286
96 4L9Z COA 7.14286
97 1PVN MZP 7.14286
98 5G48 1FL 7.14286
99 5KL0 G16 7.14286
100 4L80 OXL 7.14286
101 1JQN DCO 7.14286
102 4R5M NAP 7.14286
103 3VRY B43 7.14286
104 1GAW FAD 7.14286
105 1IWE IMP 8.03571
106 3KJS NAP 8.03571
107 6C1S EFV 8.03571
108 1BZY IMU 8.03571
109 4CNG SAH 8.03571
110 2FR3 REA 8.03571
111 4MO4 ACP 8.03571
112 2VWT PYR 8.03571
113 4K2G 1OQ 8.23529
114 1QF5 RPL 8.92857
115 1QF5 GDP 8.92857
116 6G3F FUM 8.92857
117 3PE2 E1B 8.92857
118 3BY9 SIN 8.92857
119 1ML4 PAL 8.92857
120 5AB7 MLC 8.92857
121 5E2N V14 8.92857
122 2ZKJ ADP 9.82143
123 1SQF SAM 9.82143
124 1XSE NDP 9.82143
125 2OFV 242 9.82143
126 2H8H H8H 10.7143
127 5USZ SKE 10.7143
128 3W0O ADP 10.7143
129 3W0O HY0 10.7143
130 1PI5 SM2 11.6071
131 4A8T PAO 11.6071
132 4A8H PUW 11.6071
133 5N69 2OW 11.6071
134 1BVY FMN 11.6071
135 4WUP 3UF 12.5
136 1IA9 ANP 12.5
137 1NFS DED 12.5
138 4IPE ANP 12.5
139 1P1C SAH 13.3929
140 1QDS PGA 13.3929
141 5O9X G16 14.2857
142 4IYO 0JO 16.0714
143 2AMV BIN 16.9643
144 4OPC PGT 16.9643
145 4YMZ 13P 16.9643
146 2QRD ATP 18.75
147 1EM6 CP4 20.5357
148 3RG9 WRA 21.4286
149 3RG9 NDP 21.4286
150 2QZS ADP 21.4286
151 2QZS 250 21.4286
152 2QZS GLC 21.4286
153 2RC5 FAD 23.2143
154 4GN8 ASO 24.1071
155 2NYA MGD 28.5714
156 1UNQ 4IP 33.0357
157 1FAO 4IP 36.6071
158 1FHX 4IP 39.2857
159 1FHW I5P 39.2857
160 1U29 I3P 40.1786
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