Receptor
PDB id Resolution Class Description Source Keywords
3BC1 1.8 Å EC: 3.6.5.2 CRYSTAL STRUCTURE OF THE COMPLEX RAB27A-SLP2A MUS MUSCULUS RAB27 GTPASE RAB SIGNALING PROTEIN GDPNP SLP2A EXOPHILGTP-BINDING LIPOPROTEIN MEMBRANE METHYLATION NUCLEOTIDEPRENYLATION SIGNALING PROTEIN-TRANSPORT PROTEIN COMPLEX
Ref.: ELUCIDATION OF RAB27 RECRUITMENT BY ITS EFFECTORS: OF RAB27A BOUND TO EXOPHILIN4/SLP2-A STRUCTURE V. 16 1468 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP A:195;
E:195;
Valid;
Valid;
none;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG A:194;
E:194;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3BC1 1.8 Å EC: 3.6.5.2 CRYSTAL STRUCTURE OF THE COMPLEX RAB27A-SLP2A MUS MUSCULUS RAB27 GTPASE RAB SIGNALING PROTEIN GDPNP SLP2A EXOPHILGTP-BINDING LIPOPROTEIN MEMBRANE METHYLATION NUCLEOTIDEPRENYLATION SIGNALING PROTEIN-TRANSPORT PROTEIN COMPLEX
Ref.: ELUCIDATION OF RAB27 RECRUITMENT BY ITS EFFECTORS: OF RAB27A BOUND TO EXOPHILIN4/SLP2-A STRUCTURE V. 16 1468 2008
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 17 families.
1 3BC1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 14 families.
1 3BC1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 3BC1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 GDP 0.839506 0.973684
3 GP3 0.82716 0.948718
4 GTP 0.809524 0.973684
5 GNH 0.807229 0.986842
6 G1R 0.77907 0.961039
7 GCP 0.77907 0.948718
8 GSP 0.770115 0.925
9 5GP 0.756098 0.960526
10 G 0.756098 0.960526
11 G2R 0.747253 0.936709
12 GMV 0.747126 0.948718
13 GAV 0.714286 0.936709
14 GP2 0.712644 0.936709
15 G2P 0.711111 0.936709
16 Y9Z 0.708333 0.880952
17 GDP MG 0.696629 0.9
18 GDD 0.690722 0.936709
19 GDC 0.690722 0.936709
20 GKE 0.690722 0.936709
21 GDP BEF 0.688889 0.878049
22 G5P 0.686869 0.948718
23 GPG 0.684211 0.936709
24 GTG 0.683673 0.91358
25 GFB 0.683673 0.936709
26 GDR 0.683673 0.936709
27 JB2 0.68 0.936709
28 GKD 0.68 0.936709
29 G3A 0.676768 0.948718
30 6CK 0.676768 0.91358
31 GDX 0.673267 0.948718
32 ALF 5GP 0.67033 0.86747
33 GTP MG 0.666667 0.9
34 BEF GDP 0.666667 0.86747
35 YGP 0.663265 0.879518
36 GCP G 0.659574 0.911392
37 GPD 0.656863 0.902439
38 GDP AF3 0.645833 0.86747
39 GDP ALF 0.645833 0.86747
40 JB3 0.641509 0.925
41 DBG 0.640351 0.974359
42 G3D 0.638298 0.960526
43 G4P 0.625 0.960526
44 GMP 0.621951 0.857143
45 NGD 0.62037 0.936709
46 GGM 0.618182 0.925926
47 0O2 0.616162 0.960526
48 G G 0.61 0.911392
49 2MD 0.603604 0.870588
50 CAG 0.60177 0.904762
51 U2G 0.590909 0.91358
52 FEG 0.590909 0.858824
53 GDP 7MG 0.590476 0.888889
54 MGD 0.587719 0.870588
55 ZGP 0.585586 0.848837
56 CG2 0.580357 0.91358
57 ANP 0.568421 0.922078
58 PGD 0.567797 0.902439
59 MD1 0.567797 0.870588
60 3GP 0.56044 0.922078
61 TPG 0.558333 0.822222
62 GH3 0.55 0.948052
63 FE9 0.546219 0.778947
64 GPX 0.539216 0.922078
65 G4M 0.539062 0.860465
66 DGI 0.536082 0.9
67 BGO 0.535088 0.901235
68 IDP 0.53125 0.947368
69 DGT 0.53 0.9
70 2GP 0.526882 0.935065
71 G1R G1R 0.520325 0.901235
72 I2C FE2 CMO CMO 0.516667 0.811111
73 U A G G 0.512605 0.911392
74 AGO 0.504202 0.91358
75 G A A A 0.504202 0.9
76 P2G 0.5 0.860759
77 G1G 0.5 0.902439
78 MGP 0.49505 0.936709
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 DGP 0.474227 0.8875
83 DG 0.474227 0.8875
84 G G U 0.473684 0.911392
85 IMP 0.463918 0.934211
86 G2Q 0.462963 0.936709
87 GPC 0.459677 0.858824
88 G C 0.459016 0.878049
89 GTA 0.448276 0.91358
90 G7M 0.444444 0.924051
91 MAP 0.439252 0.898734
92 G G G RPC 0.435484 0.853659
93 B4P 0.434343 0.871795
94 AP5 0.434343 0.871795
95 ADP 0.434343 0.896104
96 A2D 0.43299 0.871795
97 U G A 0.431655 0.86747
98 G G G C 0.426357 0.890244
99 SGP 0.425743 0.807229
100 AU1 0.425743 0.922078
101 BA3 0.424242 0.871795
102 35G 0.423077 0.909091
103 PCG 0.423077 0.909091
104 A G C C 0.423077 0.888889
105 C2E 0.423077 0.897436
106 APC G U 0.421875 0.864198
107 ATP 0.421569 0.896104
108 ACQ 0.419048 0.873418
109 5GP 5GP 0.419048 0.860759
110 AQP 0.417476 0.896104
111 5FA 0.417476 0.896104
112 01G 0.417391 0.880952
113 UNP 0.415842 0.810127
114 AN2 0.415842 0.909091
115 6AD 0.415094 0.821429
116 ITT 0.411765 0.846154
117 M33 0.411765 0.860759
118 G C C C 0.410448 0.901235
119 G U34 0.408 0.86747
120 ACP 0.407767 0.873418
121 APR 0.403846 0.871795
122 AR6 0.403846 0.871795
123 DG DG 0.403509 0.845238
124 A4P 0.403226 0.848837
125 UCG 0.402985 0.888889
126 AD9 0.4 0.873418
127 SAP 0.4 0.851852
128 AGS 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3BC1; Ligand: GNP; Similar sites found: 483
This union binding pocket(no: 1) in the query (biounit: 3bc1.bio1) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1JJ7 ADP 0.0000007735 0.6705 None
2 1GXU 2HP 0.0002669 0.49442 None
3 4E03 ADP 0.0000118 0.44596 None
4 1PTR PRB 0.02163 0.41681 None
5 2IL4 COA 0.009075 0.41057 None
6 2O66 FLC 0.0306 0.40517 None
7 4DE1 0J6 0.02125 0.40024 None
8 2YIP YIO 0.03438 0.40676 1.44928
9 3UIE ANP 0.00002233 0.53731 1.53846
10 2WIC GNP 0.00000002332 0.6879 2.05128
11 3B7G ANP 0.0003303 0.48768 2.05128
12 1LVG ADP 0.0000003044 0.45195 2.05128
13 2KIN ADP 0.0000003102 0.41697 2.05128
14 1SVI GDP 0.000000000197 0.56384 2.5641
15 1XP8 AGS 0.0001307 0.52013 2.5641
16 4QOS ADP 0.0002822 0.48539 3.07692
17 5K5Z ANP 0.00007364 0.4771 3.07692
18 2VVG ADP 0.00000007623 0.43076 3.07692
19 1NN5 ANP 0.003863 0.4113 3.07692
20 4WEI GLC GAL 0.02243 0.41008 3.07692
21 4OHY ANP 0.00004601 0.48543 3.58974
22 1ION ADP 0.00003883 0.43336 3.58974
23 4Z7X 3CX 0.03525 0.40898 3.58974
24 2XT3 ADP 0.000000326 0.67954 4.10256
25 3NHB ADP 0.000004112 0.61354 4.10256
26 4AG5 ADP 0.000006202 0.60376 4.10256
27 5FG3 GDP 0.00000000003796 0.5781 4.10256
28 3DZD ADP 0.0002152 0.48554 4.10256
29 2WOJ ADP ALF 0.00002781 0.48217 4.10256
30 3BFX A3P 0.002379 0.42945 4.10256
31 4FRZ ADP 0.000001398 0.4272 4.10256
32 5X40 ACP 0.0007082 0.4232 4.10256
33 4KFU ACP 0.00001652 0.40145 4.10256
34 2WJG GDP 0.0000000151 0.70792 4.25532
35 2ZFI ADP 0.000001683 0.6068 4.61538
36 4WZ6 ATP 0.000006347 0.60367 4.61538
37 1JI0 ATP 0.00001536 0.57565 4.61538
38 4P32 ADP 0.001578 0.42976 4.61538
39 1CR1 TTP 0.0003158 0.42557 4.61538
40 2PZE ATP 0.000001206 0.41062 4.61538
41 1BO4 COA 0.01261 0.41525 4.7619
42 2WJH GDP 0.00000001447 0.54684 4.81928
43 2WJH FLC 0.000001507 0.48494 4.81928
44 1Y63 ADP 0.000007094 0.57593 4.8913
45 1HTW ADP 0.00002391 0.43007 5.06329
46 1G6H ADP 0.000001126 0.65979 5.08475
47 3EZ2 ADP 0.0001085 0.52422 5.08475
48 3ZQ6 ADP ALF 0.0000195 0.49799 5.08475
49 1YTM ATP 0.0001883 0.47339 5.08475
50 1L2T ATP 0.0003741 0.44832 5.08475
51 2RCN GDP 0.00000000002059 0.60426 5.12821
52 1IN4 ADP 0.0001321 0.4849 5.12821
53 3FWY ADP 0.000005439 0.4764 5.12821
54 2OFW ADX 0.0004575 0.4589 5.12821
55 1NJF AGS 0.00009395 0.45224 5.12821
56 1NJF ADP 0.00006807 0.44431 5.12821
57 1D2N ANP 0.001641 0.43272 5.12821
58 1QAN SAH 0.001527 0.42682 5.12821
59 4O48 ASP 0.01345 0.42496 5.12821
60 2B4G ORO 0.0214 0.41196 5.12821
61 3LRE ADP 0.0000002318 0.6939 5.64103
62 4ZKD GDP 0.000000000101 0.6925 5.64103
63 5MZN ADP 0.001235 0.47659 5.64103
64 5J1J ANP 0.00005127 0.48809 5.96491
65 1TAD GDP 0.0000000005753 0.68602 6.15385
66 1TAD ALF 0.0000000005753 0.64139 6.15385
67 3AB3 GDP 0.00000003433 0.57627 6.15385
68 1ZCB GDP 0.0000002034 0.57521 6.15385
69 4XTR ADP 0.00005567 0.50146 6.15385
70 4XTR ATP 0.00005785 0.48591 6.15385
71 4XVU ATP 0.00005906 0.48553 6.15385
72 2BEK ATP 0.0001127 0.47836 6.15385
73 3E70 GDP 0.000003503 0.46397 6.15385
74 4U60 SIA GAL NGA 0.00487 0.44523 6.15385
75 4U60 SIA 0.006254 0.43872 6.15385
76 4MKF AP5 0.001649 0.43763 6.15385
77 1XMV ADP 0.00009007 0.4102 6.15385
78 4U60 SIA GAL BGC NGA GAL 0.03106 0.40345 6.15385
79 5G09 6DF 0.008343 0.40212 6.15385
80 4BQS ADP 0.00003657 0.54074 6.25
81 4DCT GDP 0.0000000001408 0.79493 6.66667
82 4LC1 GDP 0.000000001227 0.76178 6.66667
83 4YDS ATP 0.000009151 0.58735 6.66667
84 5I34 GDP 0.0000617 0.52282 6.66667
85 4MKG AP5 0.001248 0.44164 6.66667
86 2QN6 GDP 0.0000000004033 0.79926 6.77966
87 4RD0 GDP 0.00000000002268 0.76217 6.77966
88 2DPY ADP 0.00007258 0.5406 6.77966
89 1ZUI SKM 0.0002341 0.46718 6.77966
90 4PJ3 ANP 0.003602 0.42912 6.77966
91 3BER AMP 0.007141 0.4275 6.77966
92 5H68 AGS 0.0007431 0.40455 6.77966
93 3DCJ THH 0.01845 0.40322 6.77966
94 4M6T SAM 0.0258 0.40219 6.77966
95 4NON GDP 0.000000116 0.56372 7.17949
96 1FP6 ADP 0.00002175 0.53141 7.17949
97 2CHG ANP 0.0002346 0.47872 7.17949
98 2IXE ATP 0.0002876 0.46111 7.17949
99 4R98 GNH 0.0000008702 0.62095 7.38007
100 5BQ5 ADP BEF 0.00007515 0.51247 7.40741
101 3CNL GNP 0.000000003577 0.75124 7.69231
102 3DC4 ADP 0.0000003391 0.66175 7.69231
103 1W5T ANP 0.0009512 0.44297 7.69231
104 1W5T ADP 0.00165 0.44052 7.69231
105 2X7I CIT 0.006804 0.42854 7.79221
106 4CVN ADP 0.00000577 0.59776 8.0292
107 5GJC ATP 0.00003885 0.53944 8.20513
108 2FNA ADP 0.000237 0.46467 8.20513
109 2OZE AGS 0.0001891 0.42945 8.20513
110 3RC3 ANP 0.009609 0.42549 8.20513
111 3A4M ADP 0.000002313 0.6184 8.47458
112 1MKY GDP 0.00000000007855 0.58488 8.47458
113 3B5J 12D 0.00002038 0.56928 8.47458
114 5LB3 ADP 0.0001062 0.5247 8.47458
115 5IRN ADP 0.00003981 0.51931 8.47458
116 2QZ4 ADP 0.00006363 0.51588 8.47458
117 5FTB ANP 0.0001263 0.50186 8.47458
118 4ZNL BEF ADP 0.0003063 0.48925 8.47458
119 5VGR GDP 0.0002928 0.47438 8.47458
120 5FHD ADP ALF 0.0002849 0.46562 8.47458
121 2ZTS ADP 0.0004342 0.46208 8.47458
122 4YS0 ADP 0.0007878 0.455 8.47458
123 1F9V ADP 0.000001157 0.43086 8.47458
124 1G8S MET 0.01024 0.42979 8.47458
125 2GWH A3P 0.00409 0.42272 8.47458
126 2Y65 ADP 0.000001017 0.41826 8.47458
127 1BG2 ADP 0.0000002857 0.41765 8.47458
128 1KO8 6PG 0.0004407 0.41426 8.47458
129 2XAU ADP 0.0001572 0.41198 8.47458
130 4NCN GTP 0.00000000001111 0.76505 8.71795
131 4TMZ GSP 0.00000000006508 0.73315 8.71795
132 1TQ4 GDP 0.00000001271 0.65376 8.71795
133 1G41 ADP 0.00005938 0.5173 8.71795
134 1OFH ADP 0.00008656 0.42134 8.71795
135 4PU6 ASP 0.006531 0.43893 9.16031
136 2AWN ADP 0.00000006718 0.73861 9.23077
137 4PPF FLC 0.000003169 0.62918 9.23077
138 2HF9 GSP 0.000000251 0.61267 9.23077
139 5XDR ADP 0.0001558 0.50342 9.23077
140 1M7G ADX 0.0004022 0.45163 9.23077
141 1M7G ADP 0.0005789 0.44206 9.23077
142 1M7G AV2 0.000003627 0.4365 9.23077
143 5H56 TYD 0.001517 0.42653 9.23077
144 5H56 ADP 0.001517 0.42653 9.23077
145 1BH2 GSP 0.0000000022 0.62088 9.74359
146 1Y3A GDP 0.0000001108 0.59886 9.74359
147 2OM2 GDP 0.000001354 0.56608 9.74359
148 4WOP CTP 0.00003978 0.5026 9.74359
149 4XGU ADP 0.0001569 0.4866 9.74359
150 1GOJ ADP 0.00000006939 0.72392 10.1695
151 1M2O GNP 0.000000001432 0.66134 10.1695
152 1W7J ADP BEF 0.000003112 0.56336 10.1695
153 4LYA ATP 0.00001994 0.54649 10.1695
154 1G3Q ADP 0.00002249 0.54396 10.1695
155 1SQ5 ADP 0.00003959 0.53212 10.1695
156 2PL3 ADP 0.0001263 0.52088 10.1695
157 3RLF ANP 0.00008598 0.47875 10.1695
158 2GK6 ADP 0.001406 0.47366 10.1695
159 5G41 AP5 0.002205 0.43636 10.1695
160 1QHG ATP 0.008291 0.41239 10.1695
161 1UKZ ADP 0.004701 0.41036 10.1695
162 1NT4 G1P 0.02843 0.40598 10.1695
163 5CK5 GDP 0.0000000008556 0.78271 10.2564
164 1SVK ALF GDP 0.0000000007059 0.68513 10.2564
165 3Q9L ATP 0.00002058 0.52637 10.2564
166 2C04 GCP 0.00005857 0.50589 10.2564
167 2CK3 ANP 0.0003536 0.46602 10.2564
168 2CK3 ADP 0.0005304 0.44591 10.2564
169 1W0J ADP 0.00005852 0.4336 10.2564
170 1P4V GLY 0.01184 0.42654 10.2564
171 2JLR ANP 0.0001166 0.42265 10.2564
172 1W0J ADP BEF 0.0003516 0.41927 10.2564
173 5KSP GDP 0.00000006689 0.66582 10.5263
174 4R2I ANP 0.002642 0.45941 10.7692
175 3COB ADP 0.000000204 0.43689 10.7692
176 2CBZ ATP 0.0000002769 0.6944 11.2821
177 2Z5F A3P 0.007363 0.40448 11.2821
178 2QTV GNP 0.000000001008 0.65856 11.3772
179 4J0Q GDP 0.000000000822 0.78359 11.8644
180 3VMF GTP 0.00000000008822 0.70977 11.8644
181 2W58 ADP 0.0000005494 0.68114 11.8644
182 3A1S GDP 0.0000000387 0.67729 11.8644
183 1CS4 GSP 0.0000000007306 0.64901 11.8644
184 1AZT GSP 0.0000000005947 0.64109 11.8644
185 1JWY GDP 0.00000103 0.59244 11.8644
186 1JWY ADP 0.000002746 0.58801 11.8644
187 2WHX ADP 0.00001539 0.58271 11.8644
188 2XTN GTP 0.0000007706 0.56385 11.8644
189 5LTJ ADP 0.0000202 0.54621 11.8644
190 3ZFD ANP 0.00000002292 0.53966 11.8644
191 5LTJ BEF 0.0004455 0.51723 11.8644
192 3DKP ADP 0.0001299 0.51354 11.8644
193 2C9O ADP 0.0001837 0.47386 11.8644
194 3IO3 ADP 0.00006973 0.44536 11.8644
195 3FB4 AP5 0.001708 0.43587 11.8644
196 4IOK ADP 0.0008473 0.43374 11.8644
197 4IOK XPO 0.0007033 0.42946 11.8644
198 1XKV ATP 0.00008121 0.42243 11.8644
199 5JBE MAL 0.03557 0.40189 11.8644
200 3T34 GDP 0.00000759 0.52257 12.3077
201 2Q2Y ADP 0.0003684 0.4641 12.8205
202 2Q2Y MKR 0.0003938 0.46164 12.8205
203 1QHH ATP 0.01587 0.4064 13.0178
204 3H86 AP5 0.000477 0.45292 13.0208
205 1KK1 GNP 0.000000003882 0.74944 13.3333
206 1G7S GDP 0.00000000179 0.74166 13.5593
207 2XTZ GSP 0.0000000002611 0.69091 13.5593
208 5TSH ADP 0.00003149 0.56464 13.5593
209 5TSH ANP 0.00002071 0.55294 13.5593
210 4PX9 ADP 0.00004083 0.54572 13.5593
211 2ZR9 DTP 0.00008906 0.52164 13.5593
212 4RZ3 ADP 0.00008915 0.49767 13.5593
213 1VHT BA3 0.0004657 0.47514 13.5593
214 3KTA AP5 0.0004081 0.47273 13.5593
215 5M7P ADP 0.0004566 0.46111 13.5593
216 1OYY AGS 0.003791 0.44112 13.5593
217 1UJ2 ADP 0.002559 0.41276 13.5593
218 1UJ2 C5P 0.002688 0.4119 13.5593
219 3R7F CP 0.02886 0.40724 13.5593
220 1T5C ADP 0.0000008683 0.40723 13.5593
221 4OKD GLC GLC GLC 0.02899 0.40608 13.5593
222 2VF7 ADP 0.0001473 0.40462 13.5593
223 1R0X ATP 0.00003457 0.4018 13.5593
224 1XEX ATP 0.004506 0.4013 13.5593
225 4GBM A3P 0.006352 0.40104 13.5593
226 5HCN GCP 0.0000000003121 0.77825 13.8462
227 1SKQ GDP 0.000000008329 0.73265 13.8462
228 1FQJ ALF 0.00000004996 0.71496 13.8462
229 1FQK ALF 0.0000001974 0.69093 13.8462
230 1FQJ GDP 0.00000001419 0.63596 13.8462
231 3W5J GDP 0.000001822 0.63309 13.8462
232 1FQK GDP 0.00000002923 0.62291 13.8462
233 2VOH CIT 0.008452 0.40853 14.0127
234 1YRB GDP 0.0000000001175 0.77412 14.359
235 3P4X ADP 0.00001464 0.42077 14.359
236 2B8W ALF 5GP 0.00001232 0.49828 14.8718
237 5GOE GDP 0.000000003563 0.71625 15.2542
238 3WXM GTP 0.0000000001592 0.69951 15.2542
239 1NRJ GTP 0.000000001468 0.62631 15.2542
240 4PFO ADP 0.00002691 0.49032 15.2542
241 3FVQ ATP 0.00008718 0.48786 15.2542
242 4LJ9 ACP 0.0006417 0.47926 15.2542
243 5H67 ATP 0.004212 0.43431 15.2542
244 4FCW ADP 0.0002587 0.40425 15.2542
245 4P4T GDP 0.000001336 0.57297 15.8974
246 4IDN GNP 0.00006053 0.4898 16.4103
247 2V7Q ADP 0.00006837 0.52731 16.6667
248 2V7Q ATP 0.00003921 0.52579 16.6667
249 2GJ8 ALF GDP 0.0000000003699 0.67061 16.9492
250 1WDT GTP 0.0000000107 0.66551 16.9492
251 4ZG4 VO4 ADP 0.0000002695 0.58281 16.9492
252 4TTQ ATP 0.0001405 0.51186 16.9492
253 1IHU AF3 0.00005146 0.49278 16.9492
254 3VX3 ADP 0.0001158 0.48743 16.9492
255 1IHU ADP 0.00006228 0.48457 16.9492
256 2BIF SIN 0.002479 0.43218 16.9492
257 2BIF ANP 0.001399 0.43218 16.9492
258 1K6M AGS 0.001682 0.42507 16.9492
259 3EWA ANP 0.0000521 0.40931 16.9492
260 1APZ ASP 0.008799 0.43218 17.0213
261 5L3W GDP 0.000008589 0.55687 17.4359
262 5M04 GDP 0.0000000004432 0.79718 17.9487
263 1PUJ GNP 0.000000004121 0.57745 17.9487
264 3EC1 GDP 0.0000000017 0.56608 17.9487
265 1OS1 ATP 0.0009879 0.41108 17.9487
266 1OS1 PYR 0.001034 0.40548 17.9487
267 3U6B GDP 0.0000000001338 0.82353 18.4615
268 2BVN GNP 0.00000000004292 0.79428 18.4615
269 5JBQ GDP 0.0000000004665 0.78253 18.4615
270 4G5G GDP 0.0000000005298 0.7798 18.4615
271 3U6K GDP 0.000000001273 0.76099 18.4615
272 4PC3 GDP 0.00000004307 0.65597 18.4615
273 1D8T GDP 0.0000000003853 0.56649 18.4615
274 2HCJ GDP 0.000000000149 0.56538 18.4615
275 4P3Y GDP 0.0000000001751 0.56377 18.4615
276 3QXC ATP 0.0009367 0.42286 18.4615
277 5IRR GSP 0.000000004901 0.66322 18.6441
278 3BFV ADP 0.00001701 0.55716 18.6441
279 4HSE ADP 0.00002988 0.53801 18.6441
280 3FKQ ATP 0.00003522 0.51586 18.6441
281 4R43 GDP 0.000132 0.51319 18.6441
282 1P9B GDP 0.00009428 0.49657 18.6441
283 1F5N GNP 0.00001261 0.49551 18.6441
284 1FNN ADP 0.0003036 0.46894 18.6441
285 1P9B HDA 0.01171 0.42806 18.6441
286 3VM7 GLC 0.01661 0.42804 18.6441
287 5J1S ATP 0.001525 0.42342 18.6441
288 4HI0 GDP 0.000001379 0.56574 20.339
289 4H1V GNP 0.000002782 0.56556 20.339
290 5KDO GDP 0.00000159 0.56306 20.339
291 5MVR ADP 0.00002401 0.54976 20.339
292 3BOS CDP 0.0001212 0.51502 20.339
293 4IEE AGS 0.0005723 0.48764 20.339
294 5HR5 ADP 0.0004924 0.4642 20.339
295 3KJI ADP 0.00001677 0.45767 20.339
296 4KVA GTP 0.00005773 0.40407 20.339
297 4WZA ACP 0.00002292 0.53582 20.5128
298 4WZA ADP 0.00002292 0.53582 20.5128
299 2OBM ADP 0.000256 0.51925 21.0256
300 4D81 ADP 0.0001467 0.49321 21.0256
301 1G7C 5GP 0.0000004353 0.63581 21.2766
302 2ODE ALF GDP 0.0000000002887 0.65204 21.5385
303 3QF7 ANP 0.0005965 0.40919 22
304 3WY9 GDP 0.00000000007498 0.83626 22.0339
305 3WYA GDP 0.0000000004866 0.78163 22.0339
306 1D2E GDP 0.0000000118 0.68188 22.0339
307 3CX8 GSP 0.0000000006832 0.63845 22.0339
308 4YMU ATP 0.00001237 0.572 22.0339
309 1GOT GDP 0.0000007441 0.57076 22.0339
310 5I0H ADP BEF 0.0000001084 0.55316 22.0339
311 3IIJ ADP 0.000004863 0.44069 22.0339
312 4OI4 ATP 0.0009632 0.43514 22.0339
313 5E58 CPZ 0.03085 0.40435 22.0339
314 2F5X ASP 0.03682 0.40022 22.0339
315 1GP2 GDP 0.000002028 0.54639 22.5352
316 4B47 GDP 0.00000000007992 0.83486 22.5641
317 3Q85 GNP 0.000000000002401 0.62707 23.0769
318 4V03 ADP 0.0000095 0.5548 23.5897
319 3MD0 GDP 0.0000000009172 0.78118 23.7288
320 1V8K ANP 0.0000002108 0.65137 23.7288
321 4LPS GDP 0.0000002004 0.64284 23.7288
322 1H65 GDP 0.00000544 0.53415 23.7288
323 5GVR LMR 0.0001946 0.52096 23.7288
324 2QEN ADP 0.00005237 0.44161 23.7288
325 1NY5 ADP 0.0002632 0.41956 23.7288
326 2ZPA ADP 0.000372 0.41662 23.7288
327 2GDJ ANP 0.0001304 0.51346 24.1026
328 1R6B ADP 0.00007217 0.41801 24.1026
329 3FYH ADP 0.002594 0.41401 24.1026
330 5DI3 GNP 0.00000000002522 0.76021 25.1282
331 5N69 ADP 0.000006269 0.5563 25.4237
332 1G6O ADP 0.00007766 0.5118 25.4237
333 1Z6T ADP 0.0002255 0.4795 25.4237
334 2PEZ DAT 0.0004484 0.45119 25.4237
335 2FAH GDP 0.0001547 0.42398 25.4237
336 1X6V ADP 0.0004354 0.42344 25.4237
337 3ZIA ADP 0.0001312 0.42153 25.4237
338 3ZIA ATP 0.00006003 0.41946 25.4237
339 5E5U MLI 0.01436 0.41445 25.4237
340 5IFS ADP 0.0001322 0.41361 25.4237
341 2PEZ GGZ 0.0004484 0.40719 25.4237
342 5KSZ GCP 0.0000001845 0.63547 26.1538
343 1WF3 GNP 0.000000001206 0.6673 26.6667
344 2C78 GNP 0.00000000004615 0.74909 27.1186
345 2C77 GNP 0.00000000006258 0.67285 27.1186
346 2VB6 ADP BEF 0.00001348 0.5122 27.1186
347 1B0U ATP 0.0003635 0.47505 27.1186
348 3H4S ADP 0.0000003485 0.42908 27.1186
349 3QKT ANP 0.0005465 0.43298 27.1795
350 3TK1 GDP 0.0000000001184 0.84146 27.6923
351 2IYL GDP 0.000003752 0.58959 28.8136
352 1JJV ATP 0.00002002 0.57457 28.8136
353 4QM7 GTP 0.00002325 0.42009 28.8136
354 4GOX A3P 0.002257 0.41976 28.8136
355 1OXV ANP 0.00001337 0.41423 28.8136
356 4U00 ADP 0.000000877 0.40429 28.8136
357 1ZJ6 G3D 0.00000000284 0.73199 28.877
358 1YZG GDP 0.000000003114 0.5571 29.0503
359 5KUT GDP 0.000000001936 0.55709 29.6296
360 5L3V GDP 0.000002732 0.58031 30.5085
361 5L3S GNP 0.000007113 0.51849 30.5085
362 2IS6 ADP 0.000127 0.51404 30.5085
363 5L3S G 0.03672 0.40326 30.5085
364 2FH5 GTP 0.000000000003908 0.80563 30.7692
365 4ZI2 GNP 0.000000000008237 0.78081 31.0526
366 4GOJ GNP 0.000000000008842 0.71452 31.2169
367 4V0K GDP 0.000000365 0.57107 31.9527
368 2NCD ADP 0.000001504 0.63605 32.2034
369 2OG2 MLI 0.00001369 0.58165 32.2034
370 3B9Q MLI 0.00003501 0.56014 32.2034
371 5L3R GCP 0.000001479 0.5463 32.2034
372 4A4Z ANP 0.002566 0.44951 32.2034
373 1FZQ GDP 0.0000000002455 0.7963 32.5967
374 1YQT ADP 0.0000138 0.58569 33.8983
375 2CE7 ADP 0.0001162 0.41405 33.8983
376 3ZS9 ADP ALF 0.00001993 0.48767 34.2105
377 2A5F GTP 0.0000000005444 0.66915 34.2857
378 3AQ4 GDP 0.000000003224 0.72934 35.3261
379 1F6B GDP 0.00000002006 0.69105 35.3846
380 1I4D GDP 0.00000000006642 0.83893 35.4167
381 2X77 GDP 0.0000000002283 0.7848 35.4497
382 1MH1 GNP 0.000000000003273 0.7504 35.4839
383 1F2U ATP 0.0008282 0.43248 35.8108
384 1G4U GDP 0.00000001542 0.6585 35.8696
385 1G4U AF3 0.00006812 0.54618 35.8696
386 1E96 GTP 0.000000000003006 0.76849 35.9375
387 4KAX GTP 0.00000000001874 0.70379 36.0947
388 1ZD9 GDP 0.00000000004458 0.77058 36.1702
389 3SBD GNP 0.0000000000001384 0.82197 36.3636
390 2W83 GTP 0.0000000000755 0.73047 36.9697
391 3N5C GDP 0.00000000136 0.75957 37.037
392 3PCR GTP 0.0000000002083 0.71215 37.037
393 1DAR GDP 0.00000002416 0.52556 37.2881
394 3DOE GTP 0.0000000000448 0.73988 37.5
395 2FJU GSP 0.000000000005682 0.71086 37.6404
396 2WKQ GTP 0.000000000006023 0.77611 37.9487
397 1DS6 GDP 0.00000000008968 0.58415 38.0208
398 1HE1 GDP 0.000000002941 0.68124 38.0682
399 1HE1 AF3 0.00000948 0.58655 38.0682
400 1KSH GDP 0.000000000003831 0.71332 38.8158
401 2W2X GSP 0.000000000004887 0.71394 38.9189
402 2GCO GNP 0.00000000005413 0.64978 38.9744
403 2GCN GDP 0.000000001761 0.62988 38.9744
404 1KK8 BEF ADP 0.000002171 0.57042 38.9831
405 1B7T ADP 0.000008567 0.55692 38.9831
406 5JCP GDP ALF 0.0000000001653 0.75611 39.4872
407 1S9D GDP 0.000000005196 0.71934 39.6341
408 1RE0 GDP 0.0000000005147 0.5541 39.6341
409 1J2J GTP 0.0000000001248 0.72139 39.759
410 2J59 GTP 0.0000000001513 0.71792 39.759
411 1O3Y GTP 0.0000000002139 0.71167 39.759
412 4DID GDP 0.0000000009268 0.75545 39.8964
413 1OW3 GDP 0.0000000008652 0.61103 39.8964
414 1NF3 GNP 0.00000000004875 0.72008 40
415 1GRN GDP 0.0000000001555 0.7573 40.3141
416 1A4R GNH 0.0000000002126 0.75118 40.3141
417 1A4R GDP 0.0000000002502 0.73751 40.3141
418 1GRN AF3 0.0000002225 0.67126 40.3141
419 2NGR GDP 0.00000000003477 0.61505 40.3141
420 4ITR GDP 0.00000001418 0.57601 40.3141
421 2NGR AF3 0.00000004938 0.48514 40.3141
422 2WMO GTP 0.00000000002333 0.81917 40.5263
423 3T5G GDP 0.00000000001672 0.63419 40.884
424 5IRC GDP 0.000000005838 0.70614 41.3979
425 3PQC GDP 0.00000001077 0.69361 41.5385
426 5HPY GDP 0.00000000107 0.60723 41.6216
427 1XTQ GDP 0.00000000001838 0.71511 41.8079
428 1M7B GTP 0.00000000001879 0.77615 41.8478
429 1MR3 G3D 0.000000001278 0.56825 41.9889
430 3M1I GTP 0.0000000000001771 0.82152 42.0513
431 3WYF GTP 0.0000000000002986 0.81601 42.0513
432 1GWN GTP 0.0000000000137 0.70013 42.0513
433 3LXR GDP 0.000000002128 0.7268 42.1622
434 3REF GDP 0.000000001382 0.68652 42.268
435 1KMQ GNP 0.00000000001512 0.71955 42.3913
436 4YC7 GNP 0.000000000005137 0.72546 42.5414
437 4YLG GDP 0.00000000326 0.69772 42.7746
438 1CXZ GSP 0.00000000001326 0.71123 42.8571
439 4XSH GSP 0.0000000001019 0.75474 43.0168
440 2CJW GDP 0.000000000004088 0.88417 43.2292
441 4XOI GTP 0.000000000009037 0.75888 43.3333
442 1TX4 ALF GDP 0.00000000002903 0.74772 43.5028
443 3WYG GTP 0.0000000000001399 0.7878 45.0549
444 2ZEJ GDP 0.0000002927 0.57136 45.1087
445 3E5H GNP 0.00000000000006395 0.83539 45.5056
446 1UPT GTP 0.00000000003477 0.69329 45.614
447 4HAT GNP 0.00000000000007305 0.84075 45.641
448 3GJ7 GDP 0.00000000003627 0.83734 45.641
449 3GJ4 GDP 0.0000000000392 0.83567 45.641
450 5UWT GNP 0.00000000000007916 0.83557 45.641
451 5UWW GNP 0.00000000000006173 0.81783 45.641
452 5DIF GNP 0.00000000000006184 0.8178 45.641
453 5UWJ GNP 0.00000000000006306 0.81748 45.641
454 5UWR GNP 0.00000000000006406 0.81723 45.641
455 5UWQ GNP 0.00000000000006428 0.81717 45.641
456 5UWO GNP 0.00000000000007039 0.81566 45.641
457 5UWI GNP 0.0000000000000735 0.81497 45.641
458 5UWU GNP 0.00000000000007661 0.81427 45.641
459 1IBR GNP 0.00000000000009404 0.81077 45.641
460 5UWH GNP 0.00000000000009703 0.81037 45.641
461 5DHF GNP 0.0000000000001025 0.80947 45.641
462 3GJ5 GDP 0.0000000001107 0.79996 45.641
463 3GJ8 GDP 0.0000000001139 0.79936 45.641
464 5UWP GNP 0.00000000000008382 0.79581 45.641
465 5DI9 GNP 0.000000000000116 0.79068 45.641
466 5UWS GNP 0.0000000000001522 0.78642 45.641
467 3CH5 GDP 0.0000000002215 0.78544 45.641
468 5BXQ GDP 0.00000000009621 0.59797 45.641
469 3GJ0 GDP 0.00000000004345 0.83346 46.1538
470 3GJX GTP 0.000000000000166 0.82264 46.1538
471 3GJ3 GDP 0.00000000003631 0.59602 46.1538
472 2J0V GDP 0.0000000002598 0.5849 46.1538
473 4DKX GDP 0.000000000001095 0.91244 46.6667
474 5EE5 GTP 0.000000000004791 0.79079 47.3684
475 2HT6 GDP 0.000000000002699 0.61147 47.7011
476 1X1R GDP 0.00000000004278 0.7068 47.7528
477 1R4A GNP 0.00000000001105 0.75532 47.8788
478 4DSU GDP 0.000000000007075 0.75708 48.1481
479 5UQW GDP 0.00000000001287 0.75261 48.1481
480 2G77 GDP 0.00000000005156 0.77891 48.7179
481 2G77 AF3 0.00000001265 0.74743 48.7179
482 5TB5 GDP 0.00000000002116 0.82116 49.1892
483 5TAR GDP 0.00000000003896 0.79622 49.1892
Pocket No.: 2; Query (leader) PDB : 3BC1; Ligand: GNP; Similar sites found: 10
This union binding pocket(no: 2) in the query (biounit: 3bc1.bio2) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3DGY 2GP 0.01568 0.42146 4.12371
2 4KJU 1RH 0.0291 0.40736 5.08475
3 1A0J BEN 0.03221 0.40306 5.08475
4 3DOO SKM 0.04314 0.40272 6.15385
5 3TW1 AHN 0.03473 0.40323 6.77966
6 5TP0 BRN 0.0228 0.41121 7.69231
7 4TQK NAG 0.02915 0.40638 9.23077
8 1FNZ A2G 0.03448 0.40035 12.3077
9 5E50 ALA TYR ASP GLU SEP TPO ASP GLU GLU 0.02764 0.40204 16.9492
10 3IWD M2T 0.03469 0.4049 19.1176
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