Receptor
PDB id Resolution Class Description Source Keywords
3C8F 2.25 Å EC: 1.97.1.4 4FE-4S-PYRUVATE FORMATE-LYASE ACTIVATING ENZYME WITH PARTIAL DISORDERED ADOMET ESCHERICHIA COLI ADOMET RADICAL SAM RADICAL ACTIVASE GLYCYL RADICAL CARBOMETABOLISM GLUCOSE METABOLISM IRON IRON-SULFUR METAL-BIOXIDOREDUCTASE S-ADENOSYL-L-METHIONINE
Ref.: STRUCTURAL BASIS FOR GLYCYL RADICAL FORMATION BY PY FORMATE-LYASE ACTIVATING ENZYME. PROC.NATL.ACAD.SCI.USA V. 105 16137 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MT2 A:501;
Valid;
none;
submit data
178.272 C7 H16 N O2 S CC[S@...
PGE A:502;
Invalid;
none;
submit data
150.173 C6 H14 O4 C(COC...
SF4 A:500;
Part of Protein;
none;
submit data
351.64 Fe4 S4 [S]12...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3C8F 2.25 Å EC: 1.97.1.4 4FE-4S-PYRUVATE FORMATE-LYASE ACTIVATING ENZYME WITH PARTIAL DISORDERED ADOMET ESCHERICHIA COLI ADOMET RADICAL SAM RADICAL ACTIVASE GLYCYL RADICAL CARBOMETABOLISM GLUCOSE METABOLISM IRON IRON-SULFUR METAL-BIOXIDOREDUCTASE S-ADENOSYL-L-METHIONINE
Ref.: STRUCTURAL BASIS FOR GLYCYL RADICAL FORMATION BY PY FORMATE-LYASE ACTIVATING ENZYME. PROC.NATL.ACAD.SCI.USA V. 105 16137 2008
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 3C8F - MT2 C7 H16 N O2 S CC[S@@+](C....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 3C8F - MT2 C7 H16 N O2 S CC[S@@+](C....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 3C8F - MT2 C7 H16 N O2 S CC[S@@+](C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: MT2; Similar ligands found: 3
No: Ligand ECFP6 Tc MDL keys Tc
1 MT2 1 1
2 NVA 0.484848 0.657143
3 NLE 0.432432 0.666667
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3C8F; Ligand: MT2; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 3c8f.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
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