Receptor
PDB id Resolution Class Description Source Keywords
3CXH 2.5 Å EC: 1.10.2.2 STRUCTURE OF YEAST COMPLEX III WITH ISOFORM-2 CYTOCHROME C B DEFINITION OF A MINIMAL CORE INTERFACE FOR ELECTRON TRANSFE SACCHAROMYCES CEREVISIAE COMPLEX III CYTOCHROME C ISOFORM-2 ELECTRON TRANSFER COMPLCYTOCHROME BC1 COMPLEX MITOCHONDRIALTRANSMEMBRANE COMPLEXRESPIRATORY CHAIN TRANSIENT PROTEIN-PROTEIN INTERACTION ETRANSPORT INNER MEMBRANE MITOCHONDRION TRANSIT PEPTIDE TRANSPORT PHOSPHOPROTEIN HEME IRON METAL-BINDING IRON-OXIDOREDUCTASE
Ref.: STRUCTURE OF COMPLEX III WITH BOUND CYTOCHROME C IN STATE AND DEFINITION OF A MINIMAL CORE INTERFACE FO ELECTRON TRANSFER. J.BIOL.CHEM. V. 283 17542 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
6PH E:4013;
L:4113;
Invalid;
Invalid;
none;
none;
submit data
592.785 C31 H61 O8 P CCCCC...
7PH D:4014;
O:4114;
Invalid;
Invalid;
none;
none;
submit data
564.732 C29 H57 O8 P CCCCC...
8PE C:4010;
N:4110;
Invalid;
Invalid;
none;
none;
submit data
691.959 C37 H74 N O8 P CCCCC...
9PE C:4111;
N:4011;
Invalid;
Invalid;
none;
none;
submit data
593.773 C30 H60 N O8 P CCCCC...
CN6 C:4031;
N:4131;
Invalid;
Invalid;
none;
none;
submit data
764.73 C31 H58 O17 P2 CCCCC...
FES E:4004;
P:4024;
Part of Protein;
Part of Protein;
none;
none;
submit data
175.82 Fe2 S2 S1[Fe...
HEM C:4001;
C:4002;
D:4003;
N:4021;
N:4022;
O:4023;
W:4026;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
submit data
616.487 C34 H32 Fe N4 O4 Cc1c2...
SMA C:4005;
N:4025;
Valid;
Valid;
none;
none;
submit data
514.65 C30 H42 O7 C/C=C...
SUC O:4146;
Invalid;
none;
submit data
342.296 C12 H22 O11 C([C@...
UMQ A:4021;
L:4121;
Invalid;
Invalid;
none;
none;
submit data
496.589 C23 H44 O11 CCCCC...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3CXH 2.5 Å EC: 1.10.2.2 STRUCTURE OF YEAST COMPLEX III WITH ISOFORM-2 CYTOCHROME C B DEFINITION OF A MINIMAL CORE INTERFACE FOR ELECTRON TRANSFE SACCHAROMYCES CEREVISIAE COMPLEX III CYTOCHROME C ISOFORM-2 ELECTRON TRANSFER COMPLCYTOCHROME BC1 COMPLEX MITOCHONDRIALTRANSMEMBRANE COMPLEXRESPIRATORY CHAIN TRANSIENT PROTEIN-PROTEIN INTERACTION ETRANSPORT INNER MEMBRANE MITOCHONDRION TRANSIT PEPTIDE TRANSPORT PHOSPHOPROTEIN HEME IRON METAL-BINDING IRON-OXIDOREDUCTASE
Ref.: STRUCTURE OF COMPLEX III WITH BOUND CYTOCHROME C IN STATE AND DEFINITION OF A MINIMAL CORE INTERFACE FO ELECTRON TRANSFER. J.BIOL.CHEM. V. 283 17542 2008
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 3CXH - SMA C30 H42 O7 C/C=C(C)/C....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 5 families.
1 3CXH - SMA C30 H42 O7 C/C=C(C)/C....
2 3CX5 - SMA C30 H42 O7 C/C=C(C)/C....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 5 families.
1 3CXH - SMA C30 H42 O7 C/C=C(C)/C....
2 3CX5 - SMA C30 H42 O7 C/C=C(C)/C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SMA; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 SMA 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3CXH; Ligand: SMA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 3cxh.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 3CXH; Ligand: SMA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3cxh.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
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