Receptor
PDB id Resolution Class Description Source Keywords
3D5Z 1.9 Å EC: 3.2.1.99 CRYSTAL STRUCTURE ANALYSIS OF 1,5-ALPHA-ARABINANASE CATALYTI (ABNBE201A) COMPLEXED TO ARABINOTRIOSE GEOBACILLUS STEAROTHERMOPHILUS ARABINANASE GLYCOSYL HYDROLASE BETA-PROPELLER GEOBACILLUSSTEAROTHERMOPHILUS HYDROLASE
Ref.: CRYSTAL STRUCTURE OF AN INVERTING GH 43 1,5-ALPHA-L-ARABINANASE FROM GEOBACILLUS STEAROTHER COMPLEXED WITH ITS SUBSTRATE BIOCHEM.J. V. 422 73 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CA A:400;
 Part of Protein;
 none;
 submit data
40.078 Ca [Ca+2...
FUB AHR AHR B:1;
 Valid;
 none;
 submit data
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6A8H 1.65 Å EC: 3.2.1.99 CRYSTAL STRUCTURE OF ENDO-ARABINANASE ABN-TS D27A MUTANT IN WITH ARABINOTRIOSE GEOBACILLUS THERMODENITRIFICANS ARABINANASE THERMOSTABLE ENZYME GLYCOSIDE HYDROLASE GH43HYDROLASE
Ref.: STRUCTURES OF ENDO-1,5-ALPHA-L-ARABINANASE MUTANTS BACILLUS THERMODENITRIFICANS TS-3 IN COMPLEX WITH ARABINO-OLIGOSACCHARIDES. ACTA CRYSTALLOGR F STRUCT V. 74 774 2018 BIOL COMMUN
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 6A8I - AHR AHR AHR AHR AHR AHR n/a n/a
2 3D5Z - FUB AHR AHR n/a n/a
3 6A8H - AHR AHR AHR n/a n/a
4 3D61 - FUB AHR n/a n/a
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 6A8I - AHR AHR AHR AHR AHR AHR n/a n/a
2 3D5Z - FUB AHR AHR n/a n/a
3 6A8H - AHR AHR AHR n/a n/a
4 3D61 - FUB AHR n/a n/a
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 6A8I - AHR AHR AHR AHR AHR AHR n/a n/a
2 3D5Z - FUB AHR AHR n/a n/a
3 6A8H - AHR AHR AHR n/a n/a
4 3D61 - FUB AHR n/a n/a
5 1GYE - AHR AHR AHR AHR AHR AHR n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: FUB AHR AHR; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: FUB AHR AHR; Similar ligands found: 1
No: Ligand Similarity coefficient
1 FUB AHR AHR 1.0000
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 6A8H; Ligand: AHR AHR AHR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 6a8h.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 6A8H; Ligand: AHR AHR AHR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 6a8h.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
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