Receptor
PDB id Resolution Class Description Source Keywords
3E5H 1.5 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF RAB28 GTPASE IN THE ACTIVE (GPPNHP-BOUN HOMO SAPIENS RAB GTPASE SIGNALING PROTEIN CELL MEMBRANE GTP-BINDING LIPOPROTEIN MEMBRANE NUCLEOTIDE-BINDING PRENYLATION
Ref.: LARGE NUCLEOTIDE-DEPENDENT CONFORMATIONAL CHANGE IN FEBS LETT. V. 582 4107 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP A:201;
Valid;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
GOL A:202;
A:203;
Invalid;
Invalid;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
MG A:200;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3E5H 1.5 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF RAB28 GTPASE IN THE ACTIVE (GPPNHP-BOUN HOMO SAPIENS RAB GTPASE SIGNALING PROTEIN CELL MEMBRANE GTP-BINDING LIPOPROTEIN MEMBRANE NUCLEOTIDE-BINDING PRENYLATION
Ref.: LARGE NUCLEOTIDE-DEPENDENT CONFORMATIONAL CHANGE IN FEBS LETT. V. 582 4107 2008
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (246)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
19 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
27 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
36 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
40 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
41 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
45 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
47 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
49 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
57 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
61 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
78 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
81 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
84 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
85 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
87 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
88 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
91 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
92 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
93 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
94 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
97 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
99 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
101 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
102 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
104 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
109 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
112 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
114 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
118 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
124 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
126 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
127 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
130 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
133 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
134 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
135 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
138 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
140 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
145 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
150 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
151 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
152 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
153 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
154 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
155 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
156 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
157 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
158 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
163 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
164 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
165 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
168 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 1N6K - GDP AF3 n/a n/a
170 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
171 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
172 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
174 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
175 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
178 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
179 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
181 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
183 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
185 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
186 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
187 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
188 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
189 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
190 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
191 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
192 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
193 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
194 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
197 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
201 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
203 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
207 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
208 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
209 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
210 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
211 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
214 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
215 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
216 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
221 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
225 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
227 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
228 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
229 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
230 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
231 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
232 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
234 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
235 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
236 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
237 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
238 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
239 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
241 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
242 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
243 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
244 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
245 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 GDP 0.839506 0.973684
3 GP3 0.82716 0.948718
4 GTP 0.809524 0.973684
5 GNH 0.807229 0.986842
6 G1R 0.77907 0.961039
7 GCP 0.77907 0.948718
8 GSP 0.770115 0.925
9 5GP 0.756098 0.960526
10 G 0.756098 0.960526
11 G2R 0.747253 0.936709
12 GMV 0.747126 0.948718
13 GAV 0.714286 0.936709
14 GP2 0.712644 0.936709
15 G2P 0.711111 0.936709
16 Y9Z 0.708333 0.880952
17 GDP MG 0.696629 0.9
18 GDD 0.690722 0.936709
19 GDC 0.690722 0.936709
20 GKE 0.690722 0.936709
21 GDP BEF 0.688889 0.878049
22 G5P 0.686869 0.948718
23 GPG 0.684211 0.936709
24 GTG 0.683673 0.91358
25 GFB 0.683673 0.936709
26 GDR 0.683673 0.936709
27 JB2 0.68 0.936709
28 GKD 0.68 0.936709
29 G3A 0.676768 0.948718
30 6CK 0.676768 0.91358
31 GDX 0.673267 0.948718
32 ALF 5GP 0.67033 0.86747
33 GTP MG 0.666667 0.9
34 BEF GDP 0.666667 0.86747
35 YGP 0.663265 0.879518
36 GCP G 0.659574 0.911392
37 GPD 0.656863 0.902439
38 GDP AF3 0.645833 0.86747
39 GDP ALF 0.645833 0.86747
40 JB3 0.641509 0.925
41 DBG 0.640351 0.974359
42 G3D 0.638298 0.960526
43 G4P 0.625 0.960526
44 GMP 0.621951 0.857143
45 NGD 0.62037 0.936709
46 GGM 0.618182 0.925926
47 0O2 0.616162 0.960526
48 G G 0.61 0.911392
49 2MD 0.603604 0.870588
50 CAG 0.60177 0.904762
51 U2G 0.590909 0.91358
52 FEG 0.590909 0.858824
53 GDP 7MG 0.590476 0.888889
54 MGD 0.587719 0.870588
55 ZGP 0.585586 0.848837
56 CG2 0.580357 0.91358
57 ANP 0.568421 0.922078
58 PGD 0.567797 0.902439
59 MD1 0.567797 0.870588
60 3GP 0.56044 0.922078
61 TPG 0.558333 0.822222
62 GH3 0.55 0.948052
63 FE9 0.546219 0.778947
64 GPX 0.539216 0.922078
65 G4M 0.539062 0.860465
66 DGI 0.536082 0.9
67 BGO 0.535088 0.901235
68 IDP 0.53125 0.947368
69 DGT 0.53 0.9
70 2GP 0.526882 0.935065
71 G1R G1R 0.520325 0.901235
72 I2C FE2 CMO CMO 0.516667 0.811111
73 U A G G 0.512605 0.911392
74 AGO 0.504202 0.91358
75 G A A A 0.504202 0.9
76 P2G 0.5 0.860759
77 G1G 0.5 0.902439
78 MGP 0.49505 0.936709
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 DGP 0.474227 0.8875
83 DG 0.474227 0.8875
84 G G U 0.473684 0.911392
85 IMP 0.463918 0.934211
86 G2Q 0.462963 0.936709
87 GPC 0.459677 0.858824
88 G C 0.459016 0.878049
89 GTA 0.448276 0.91358
90 G7M 0.444444 0.924051
91 MAP 0.439252 0.898734
92 G G G RPC 0.435484 0.853659
93 B4P 0.434343 0.871795
94 AP5 0.434343 0.871795
95 ADP 0.434343 0.896104
96 A2D 0.43299 0.871795
97 U G A 0.431655 0.86747
98 G G G C 0.426357 0.890244
99 SGP 0.425743 0.807229
100 AU1 0.425743 0.922078
101 BA3 0.424242 0.871795
102 35G 0.423077 0.909091
103 PCG 0.423077 0.909091
104 A G C C 0.423077 0.888889
105 C2E 0.423077 0.897436
106 APC G U 0.421875 0.864198
107 ATP 0.421569 0.896104
108 ACQ 0.419048 0.873418
109 5GP 5GP 0.419048 0.860759
110 AQP 0.417476 0.896104
111 5FA 0.417476 0.896104
112 01G 0.417391 0.880952
113 UNP 0.415842 0.810127
114 AN2 0.415842 0.909091
115 6AD 0.415094 0.821429
116 ITT 0.411765 0.846154
117 M33 0.411765 0.860759
118 G C C C 0.410448 0.901235
119 G U34 0.408 0.86747
120 ACP 0.407767 0.873418
121 APR 0.403846 0.871795
122 AR6 0.403846 0.871795
123 DG DG 0.403509 0.845238
124 A4P 0.403226 0.848837
125 UCG 0.402985 0.888889
126 AD9 0.4 0.873418
127 SAP 0.4 0.851852
128 AGS 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3E5H; Ligand: GNP; Similar sites found: 586
This union binding pocket(no: 1) in the query (biounit: 3e5h.bio1) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1BTN I3P 0.0005011 0.52979 None
2 2W58 ADP 0.0002506 0.52144 None
3 2Q1A 2KT 0.000506 0.47911 None
4 1GXU 2HP 0.001163 0.47445 None
5 1NU4 MLA 0.008099 0.4616 None
6 2IYG FMN 0.0006822 0.44177 None
7 3BY8 MLT 0.004737 0.44125 None
8 1PR9 NAP 0.0001181 0.44023 None
9 1C1L GAL BGC 0.00558 0.43789 None
10 1QDS PGA 0.001186 0.43764 None
11 3CM2 X23 0.008571 0.43665 None
12 3H86 AP5 0.00121 0.43611 None
13 1Y75 NAG 0.0018 0.43568 None
14 3D3W NAP 0.0001356 0.43527 None
15 4F4S EFO 0.002904 0.43249 None
16 4PU6 ASP 0.009531 0.43036 None
17 1YRX FMN 0.002388 0.41608 None
18 2Q37 3AL 0.01962 0.41529 None
19 1N9L FMN 0.001154 0.41476 None
20 2BVE PH5 0.02008 0.41464 None
21 2DTX BMA 0.001388 0.41301 None
22 3CKZ ZMR 0.002397 0.40724 None
23 2GJ3 FAD 0.0003655 0.40618 None
24 1Q0H FOM 0.003765 0.40447 None
25 3KPE TM3 0.02361 0.40286 None
26 3Q3C NAD 0.006967 0.40031 None
27 1Q0H NDP 0.005662 0.40018 None
28 2Z9V PXM 0.001617 0.44332 1.1236
29 2FR6 CTN 0.001514 0.41067 1.36986
30 3UIE ANP 0.0002737 0.48602 1.68539
31 3BOS CDP 0.001512 0.46086 1.68539
32 3IU9 T07 0.002084 0.42243 1.68539
33 4O48 ASP 0.01562 0.42194 1.68539
34 1D3V ABH 0.0003516 0.41403 1.68539
35 4PTZ FMN 0.001589 0.414 1.68539
36 2GDZ NAD 0.0007198 0.41077 1.68539
37 2Q97 ATP 0.0003008 0.40775 1.68539
38 2A0W DIH 0.001276 0.40765 1.68539
39 2BNF UTP 0.002042 0.40636 1.68539
40 2J07 HDF 0.004879 0.40324 1.68539
41 2J07 FAD 0.004879 0.40324 1.68539
42 3UEC ALA ARG TPO LYS 0.001025 0.47269 2.05479
43 4F8L GAL 0.02061 0.43873 2.06897
44 1F5N GNP 0.0001091 0.45966 2.24719
45 2B8W ALF 5GP 0.0001364 0.45776 2.24719
46 3VM7 GLC 0.01377 0.42716 2.24719
47 1Q11 TYE 0.004723 0.42348 2.24719
48 1A5Z OXM 0.01577 0.42255 2.24719
49 1EXB NDP 0.003567 0.4216 2.24719
50 2GJN FMN 0.0001598 0.41814 2.24719
51 2J5V PCA 0.02731 0.41441 2.24719
52 2GNB MAN 0.04644 0.41196 2.24719
53 4DQ2 BTX 0.0005928 0.41192 2.24719
54 3MWL 8OX 0.02576 0.40773 2.24719
55 1A5Z FBP 0.02834 0.40314 2.24719
56 2HW1 ANP 0.0003209 0.4029 2.24719
57 2WGC SIA GAL BGC 0.01983 0.43968 2.33918
58 1WGC SIA GAL BGC 0.03574 0.41758 2.33918
59 1SS4 GSH 0.0003713 0.54709 2.61438
60 3MD0 GDP 0.00000001385 0.72146 2.80899
61 4BAS GNP 0.000000002912 0.62385 2.80899
62 3ZFD ANP 0.0000005345 0.49682 2.80899
63 4M51 BEZ 0.0006495 0.4907 2.80899
64 4KCT PYR 0.0003329 0.46591 2.80899
65 3B7G ANP 0.001104 0.46239 2.80899
66 3ZPG 5GP 0.006879 0.44779 2.80899
67 4KCT FDP 0.0005873 0.44429 2.80899
68 4IEE AGS 0.00427 0.44339 2.80899
69 2Y7P SAL 0.002746 0.43352 2.80899
70 2ZO9 MLI 0.001363 0.43262 2.80899
71 1OYY AGS 0.005941 0.43146 2.80899
72 2Q2Y ADP 0.002308 0.43034 2.80899
73 1DXY NAD 0.003632 0.43014 2.80899
74 1EDO NAP 0.001987 0.42951 2.80899
75 2Q2Y MKR 0.002343 0.42894 2.80899
76 1M7G ADX 0.002459 0.41936 2.80899
77 1IUP ALQ 0.0003918 0.41912 2.80899
78 1E7S NAP 0.0006798 0.41443 2.80899
79 2XKO AKG 0.02249 0.41326 2.80899
80 1M7G ADP 0.003419 0.41068 2.80899
81 2IMP NAI 0.009029 0.41032 2.80899
82 1M7G AV2 0.00004704 0.40986 2.80899
83 2C2A ADP 0.002416 0.4075 2.80899
84 3BP1 GUN 0.01853 0.40547 2.80899
85 1L8N GCW 0.0008176 0.4045 2.80899
86 1JQI FAD 0.002543 0.40097 2.80899
87 4LPS GDP 0.000001055 0.60805 3.37079
88 4AG5 ADP 0.0001267 0.53313 3.37079
89 1YQT ADP 0.000613 0.4959 3.37079
90 2PL3 ADP 0.0007278 0.48235 3.37079
91 4M5P MLA 0.004067 0.46835 3.37079
92 1PEA ACM 0.001856 0.4683 3.37079
93 3SHR CMP 0.0005403 0.45129 3.37079
94 3HU3 AGS 0.0003897 0.45044 3.37079
95 4M5P 23W 0.004963 0.44731 3.37079
96 1KYQ NAD 0.000151 0.44545 3.37079
97 1NN5 2DT 0.0001138 0.4361 3.37079
98 1EB9 HBA 0.0009752 0.43574 3.37079
99 2Q09 DI6 0.002112 0.43281 3.37079
100 4JWX 1N4 0.004095 0.42612 3.37079
101 3DZD ADP 0.004303 0.42555 3.37079
102 1D6H COA 0.0009083 0.42341 3.37079
103 3K37 BCZ 0.004036 0.42203 3.37079
104 4IOK ADP 0.001685 0.42165 3.37079
105 4IOK XPO 0.001304 0.41904 3.37079
106 3GTD MLI 0.008231 0.41831 3.37079
107 1XVV CCQ 0.001085 0.41654 3.37079
108 4HA6 FAD 0.001706 0.4142 3.37079
109 1GS5 ANP 0.000882 0.41216 3.37079
110 1GS5 NLG 0.000882 0.41216 3.37079
111 1EJE FMN 0.001427 0.41157 3.37079
112 4A4Z ANP 0.0155 0.41077 3.37079
113 2BNE U5P 0.001128 0.40938 3.37079
114 2HGZ PBF 0.0004606 0.40865 3.37079
115 4FR3 LYS ARG ARG LYS SEP VAL 0.007931 0.40844 3.37079
116 4FR3 0V4 0.007931 0.40844 3.37079
117 3OCZ SRA 0.002387 0.40769 3.37079
118 2AE2 PTO 0.002254 0.4071 3.37079
119 2AE2 NAP 0.002254 0.4071 3.37079
120 3UXL CFI 0.0147 0.40645 3.37079
121 1DLJ NAI 0.004306 0.40594 3.37079
122 2VAR ANP 0.0002548 0.40575 3.37079
123 3R7F CP 0.03201 0.4052 3.37079
124 4M5P FMN 0.001328 0.40495 3.37079
125 1WVG APR 0.0007731 0.40349 3.37079
126 1X1T NAD 0.01171 0.40288 3.37079
127 3I8P 840 0.004477 0.40174 3.37079
128 1ZK7 FAD 0.001347 0.41961 3.42612
129 2WJH GDP 0.0000001732 0.51601 3.61446
130 2WJH FLC 0.00001476 0.45333 3.61446
131 3CYI ATP 0.02776 0.40899 3.63636
132 2JGS BTN 0.004526 0.42697 3.84615
133 2HF9 GSP 0.000001024 0.58513 3.93258
134 3B5J 12D 0.0002113 0.51647 3.93258
135 4B9E FAH 0.0004421 0.48995 3.93258
136 3DKP ADP 0.001046 0.46877 3.93258
137 1QO0 BMD 0.001358 0.45956 3.93258
138 3A2Y TS5 0.000167 0.4489 3.93258
139 2AMV BIN 0.0006953 0.43318 3.93258
140 1VDC FAD 0.001002 0.42588 3.93258
141 2X7I CIT 0.008239 0.42442 3.93258
142 2XK9 XK9 0.0004821 0.42195 3.93258
143 2Y6P CTP 0.003939 0.41676 3.93258
144 2GWH A3P 0.005787 0.4159 3.93258
145 2YBQ UP2 0.0009216 0.41537 3.93258
146 2FEQ 34P 0.001538 0.4145 3.93258
147 2B4Q NAP 0.0005926 0.41344 3.93258
148 9LDB NAD 0.000885 0.40937 3.93258
149 9LDT NAD 0.0009343 0.40862 3.93258
150 3O2K DST 0.01065 0.40839 3.93258
151 3EE4 MYR 0.0002889 0.40572 3.93258
152 2R14 FMN 0.0007746 0.40512 3.93258
153 1NJF AGS 0.002175 0.40272 3.93258
154 2F5X ASP 0.03893 0.40076 3.93258
155 1MXI SAH 0.0005306 0.42649 4.375
156 1KK1 GNP 0.00000001369 0.72172 4.49438
157 2WIC GNP 0.000000175 0.64568 4.49438
158 5HCN GCP 0.00002518 0.57915 4.49438
159 2WHX ADP 0.0004501 0.50383 4.49438
160 1JI0 ATP 0.0003881 0.50274 4.49438
161 2IZ1 ATR 0.0002427 0.49364 4.49438
162 3TKA CTN 0.003251 0.49234 4.49438
163 1SQ5 ADP 0.001092 0.46263 4.49438
164 1RZM E4P 0.002121 0.45776 4.49438
165 3F81 STT 0.004692 0.45631 4.49438
166 1KTC NGA 0.001089 0.45063 4.49438
167 1I0Z OXM 0.007162 0.44689 4.49438
168 1SQ5 PAU 0.001754 0.44181 4.49438
169 1RZM PEP 0.00185 0.44083 4.49438
170 1G6O ADP 0.002894 0.43772 4.49438
171 2BGM NAJ 0.001023 0.4325 4.49438
172 2Q2V NAD 0.0002896 0.42771 4.49438
173 3U4C NDP 0.0003221 0.42024 4.49438
174 3O03 NAP 0.002559 0.41855 4.49438
175 3Q9T FAY 0.0008909 0.41823 4.49438
176 2G86 UMP 0.002192 0.41516 4.49438
177 1G8S MET 0.02371 0.41224 4.49438
178 4WVH ASP HIS ASP ALA HIS ALA 0.007121 0.411 4.49438
179 1L3I SAH 0.000205 0.40994 4.49438
180 1LDM NAD 0.006031 0.4096 4.49438
181 3TKA SAM 0.001169 0.40678 4.49438
182 3DGB MUC 0.00662 0.40341 4.49438
183 2ZB3 NDP 0.001225 0.40201 4.49438
184 4J7H TLO 0.002788 0.40145 4.49438
185 2YYJ 4HP 0.01689 0.40131 4.49438
186 2YYJ FAD 0.01689 0.40131 4.49438
187 1DLL LAT 0.03675 0.40063 4.49438
188 1ECM TSA 0.004703 0.41845 4.58716
189 3ZLM ANP 0.0001962 0.40292 4.78723
190 2OFE NAG 0.0003591 0.48589 4.92958
191 3TK1 GDP 0.000000003647 0.76407 5.05618
192 1V8K ANP 0.000002409 0.5991 5.05618
193 3DC4 ADP 0.00001654 0.57399 5.05618
194 3NHB ADP 0.0002541 0.51737 5.05618
195 2GK6 ADP 0.00302 0.45639 5.05618
196 2XDQ MGX 0.005022 0.45479 5.05618
197 1ME8 RVP 0.0007802 0.44933 5.05618
198 2B7N NTM 0.00196 0.44579 5.05618
199 1RYI FAD 0.0002206 0.44181 5.05618
200 1FNN ADP 0.001358 0.4402 5.05618
201 2IXE ATP 0.0009466 0.43917 5.05618
202 1P72 ADP 0.0001648 0.43258 5.05618
203 1CKM GTP 0.00295 0.42682 5.05618
204 4DYO SD4 0.003639 0.42305 5.05618
205 3DG6 MUC 0.002136 0.41791 5.05618
206 1Y9Q MED 0.01185 0.41661 5.05618
207 1RYI GOA 0.001501 0.41606 5.05618
208 1P4C FMN 0.005194 0.41322 5.05618
209 3FC2 IBI 0.0006913 0.41132 5.05618
210 4MWV BCZ 0.001352 0.41111 5.05618
211 3H0L ADP 0.01896 0.41043 5.05618
212 1JA9 NDP 0.007532 0.40865 5.05618
213 2QA1 FAD 0.001435 0.40788 5.05618
214 1GR0 NAD 0.01025 0.40612 5.05618
215 4QN7 G39 0.001762 0.40499 5.05618
216 4CS4 ANP 0.002446 0.40267 5.05618
217 2YIP YIO 0.02254 0.41673 5.07246
218 2BVN GNP 0.0000000003099 0.75472 5.61798
219 4NCN GTP 0.00000000007316 0.73103 5.61798
220 2C78 GNP 0.0000000002998 0.71465 5.61798
221 2C77 GNP 0.0000000003556 0.64679 5.61798
222 1D2E GDP 0.0000001124 0.63678 5.61798
223 2AWN ADP 0.000009687 0.60835 5.61798
224 1JJ7 ADP 0.00002151 0.58499 5.61798
225 1D8T GDP 0.000000002273 0.54723 5.61798
226 2NCD ADP 0.0001103 0.5354 5.61798
227 2IYL GDP 0.00006109 0.52973 5.61798
228 2C04 GCP 0.00003081 0.51847 5.61798
229 1JJV ATP 0.0003125 0.51131 5.61798
230 2JFV FLC 0.000151 0.50304 5.61798
231 2JBH 5GP 0.0001158 0.48482 5.61798
232 3ZQ6 ADP ALF 0.0003257 0.4488 5.61798
233 3BFV ADP 0.01398 0.4396 5.61798
234 3WE0 FAD 0.0005546 0.43061 5.61798
235 1Q3Q ANP 0.001324 0.42857 5.61798
236 2BH9 NAP 0.0009565 0.42635 5.61798
237 3RLF ANP 0.001787 0.42397 5.61798
238 1XIU REA 0.0009087 0.42266 5.61798
239 1DR1 HBI 0.0006404 0.42176 5.61798
240 1DR1 NAP 0.0006404 0.42176 5.61798
241 4NVP 7CH 0.0006073 0.42001 5.61798
242 3QKT ANP 0.001971 0.41888 5.61798
243 2RGH FAD 0.0009971 0.41887 5.61798
244 1EXF GLY 0.009174 0.40771 5.61798
245 4O8A FAD 0.001257 0.40452 5.61798
246 1XHL NDP 0.001631 0.40227 5.61798
247 4IZC 1GZ 0.005442 0.40203 5.61798
248 4AU8 Z3R 0.024 0.4013 5.61798
249 1GV0 NAD 0.001461 0.40105 5.61798
250 2Z5F A3P 0.008855 0.401 5.61798
251 1ULE GLA GAL NAG 0.02676 0.41116 6
252 1GU3 BGC BGC BGC BGC BGC 0.007241 0.41555 6.04027
253 2QN6 GDP 0.000000004353 0.74692 6.17978
254 1G7S GDP 0.00000001979 0.69134 6.17978
255 3W5J GDP 0.0000189 0.57116 6.17978
256 2RCN GDP 0.000000001712 0.55276 6.17978
257 1QF5 RPL 0.0000008043 0.53153 6.17978
258 1FP6 ADP 0.0003207 0.47755 6.17978
259 1U5R ATP 0.0003493 0.44239 6.17978
260 3FVQ ATP 0.001069 0.44078 6.17978
261 2AQJ TRP 0.0007614 0.4378 6.17978
262 2AQJ FAD 0.0008019 0.4378 6.17978
263 3MB5 SAM 0.0008944 0.42942 6.17978
264 2QV7 ADP 0.0009939 0.42574 6.17978
265 2PT9 S4M 0.0001957 0.42187 6.17978
266 2PT9 2MH 0.00123 0.40881 6.17978
267 1C0I FAD 0.002943 0.4081 6.17978
268 1C0I BE2 0.002943 0.4081 6.17978
269 4HZX G39 0.002307 0.4057 6.17978
270 1GSA GSH 0.002855 0.4047 6.17978
271 1H9G COA MYR 0.0008264 0.40425 6.17978
272 4TMK T5A 0.02825 0.40267 6.17978
273 1GSA ADP 0.0004702 0.40245 6.17978
274 4QCK ASD 0.0005596 0.40112 6.17978
275 2I7C AAT 0.00005869 0.40093 6.17978
276 1V1A ADP 0.001374 0.40045 6.17978
277 2GN2 C5P 0.003839 0.40031 6.17978
278 3P7I P7I 0.0003627 0.47097 6.23053
279 4NON GDP 0.0000004502 0.54268 6.74157
280 3EC1 GDP 0.000000009759 0.54254 6.74157
281 1O9U ADZ 0.00009732 0.54239 6.74157
282 4CVN ADP 0.00043 0.50042 6.74157
283 1H65 GDP 0.00005584 0.49128 6.74157
284 2EB5 OXL 0.0007583 0.4711 6.74157
285 2DPY ADP 0.001907 0.46678 6.74157
286 5KSP GDP 0.00521 0.45816 6.74157
287 1IHU AF3 0.0004936 0.45116 6.74157
288 1IHU ADP 0.0005844 0.44416 6.74157
289 2QCX PF1 0.002527 0.44093 6.74157
290 4NTD FAD 0.0004901 0.42678 6.74157
291 3PVT 3HC 0.0008165 0.4183 6.74157
292 1IN4 ADP 0.004422 0.41755 6.74157
293 1WNG SAH 0.0001547 0.40962 6.74157
294 4N02 FNR 0.00381 0.4094 6.74157
295 4CMF PXG 0.004729 0.40454 6.74157
296 1XKV ATP 0.0005186 0.40089 6.74157
297 1K6M AGS 0.0067 0.40007 6.74157
298 3S9K CIT 0.002661 0.50313 6.77966
299 1T0S BML 0.0001338 0.52437 6.97674
300 3BER AMP 0.003094 0.44549 7.22892
301 2FH5 GTP 0.00000000001733 0.77766 7.30337
302 1G7C 5GP 0.00000001928 0.70268 7.30337
303 1CS4 GSP 0.000000001 0.64472 7.30337
304 1AZT GSP 0.000000000887 0.63595 7.30337
305 4P4T GDP 0.000002266 0.56283 7.30337
306 4HI0 GDP 0.000005527 0.53966 7.30337
307 2ZWS PLM 0.0009613 0.51349 7.30337
308 1G0N NDP 0.0003061 0.43351 7.30337
309 1G41 ADP 0.003556 0.43351 7.30337
310 2FOI JPA 0.002433 0.42514 7.30337
311 2C9O ADP 0.003368 0.41921 7.30337
312 3D2Y AH0 ALA FGA LYS 0.001049 0.4162 7.30337
313 2BJK NAD 0.002797 0.41446 7.30337
314 3P3N AKG 0.01344 0.4141 7.30337
315 1G0N PHH 0.001506 0.41398 7.30337
316 4W6Z 8ID 0.001269 0.41083 7.30337
317 2PEZ DAT 0.004627 0.40938 7.30337
318 1R27 MGD 0.001548 0.40801 7.30337
319 1T10 F6P 0.01561 0.40601 7.30337
320 1T26 GBD 0.01965 0.40351 7.30337
321 1T26 NAI 0.01965 0.40351 7.30337
322 3ZIA ADP 0.0006475 0.40233 7.30337
323 2C7G ODP 0.007123 0.40149 7.30337
324 2C7G FAD 0.00757 0.4013 7.30337
325 3KJQ B94 0.002457 0.42015 7.31707
326 3QDY CBS 0.0007172 0.48002 7.69231
327 3QDY A2G GAL 0.006006 0.44323 7.69231
328 3QDT A2G GAL 0.01542 0.42303 7.69231
329 3PQC GDP 0.0000004889 0.61552 7.86517
330 2XT3 ADP 0.00002433 0.57268 7.86517
331 2ZJ5 ADP 0.00002482 0.52931 7.86517
332 4WZA ADP 0.0002715 0.48801 7.86517
333 4WZA ACP 0.0002755 0.48773 7.86517
334 4TTQ ATP 0.0005464 0.48271 7.86517
335 3I51 45C 0.000274 0.45715 7.86517
336 2IS6 ADP 0.003537 0.44261 7.86517
337 1FL2 FAD 0.0002278 0.44017 7.86517
338 2EJU SAH 0.0002452 0.43814 7.86517
339 1WDA BAG 0.002231 0.43183 7.86517
340 2CHG ANP 0.00376 0.42437 7.86517
341 4AF0 IMP 0.001248 0.42262 7.86517
342 1I2L DCS 0.0007599 0.41692 7.86517
343 4LJ9 ACP 0.0156 0.41064 7.86517
344 3SIX GDP 0.006024 0.40501 7.86517
345 2PTZ PAH 0.00007264 0.40446 7.86517
346 4BQS ADP 0.0003077 0.49503 7.95455
347 2HCJ GDP 0.0000000007961 0.54711 8.10811
348 2QLX RM4 0.003655 0.44659 8.33333
349 2OG2 MLI 0.0000007421 0.69424 8.42697
350 3B9Q MLI 0.000001826 0.66094 8.42697
351 1TAD GDP 0.000000002707 0.65869 8.42697
352 1FQJ ALF 0.0000006519 0.65336 8.42697
353 1FQK ALF 0.000001904 0.63083 8.42697
354 1FQJ GDP 0.00000005187 0.61256 8.42697
355 1FQK GDP 0.00000006127 0.60955 8.42697
356 1NRJ GTP 0.000000005647 0.60585 8.42697
357 1GOT GDP 0.000000228 0.59254 8.42697
358 2V5E SCR 0.007706 0.45348 8.42697
359 3E70 GDP 0.00001056 0.44939 8.42697
360 3FWY ADP 0.00004753 0.44766 8.42697
361 4RJK PYR 0.007363 0.43887 8.42697
362 1Y42 TYR 0.003018 0.43178 8.42697
363 4QOS ADP 0.003925 0.43148 8.42697
364 3LZW NAP 0.001931 0.4236 8.42697
365 1XX4 BAM 0.006418 0.42039 8.42697
366 5L3R GCP 0.01044 0.41639 8.42697
367 4RJK TPP 0.0001348 0.41091 8.42697
368 3LZW FAD 0.001529 0.4105 8.42697
369 1D2N ANP 0.006665 0.40635 8.42697
370 2VJJ RAM GLC GAL NAG NAG GLC 0.004952 0.40344 8.42697
371 4QDF 30Q 0.0003015 0.40178 8.42697
372 1QD0 RR6 0.002429 0.42035 8.59375
373 4K30 NLG 0.005135 0.42193 8.75
374 4DCT GDP 0.00000000248 0.73483 8.98876
375 4LC1 GDP 0.00000005242 0.68122 8.98876
376 3WXM GTP 0.00000000097 0.66811 8.98876
377 1SVK ALF GDP 0.000000002286 0.66429 8.98876
378 1BH2 GSP 0.000000002821 0.61735 8.98876
379 1Y3A GDP 0.000000226 0.58599 8.98876
380 2OM2 GDP 0.0000005221 0.58398 8.98876
381 1G6H ADP 0.0000256 0.5802 8.98876
382 1GP2 GDP 0.0000005944 0.56854 8.98876
383 1SVI GDP 0.000000005253 0.52448 8.98876
384 2XTN GTP 0.00001188 0.51448 8.98876
385 5KDO GDP 0.001983 0.45914 8.98876
386 1GJW GLC 0.002606 0.45353 8.98876
387 1EYE PMM 0.0005469 0.4455 8.98876
388 4FWE FAD 0.000225 0.44379 8.98876
389 2QZ4 ADP 0.003997 0.43111 8.98876
390 1R6D DAU 0.001006 0.42943 8.98876
391 1M5B BN1 0.001387 0.42787 8.98876
392 1LTH NAD 0.00129 0.42568 8.98876
393 2F2U M77 0.002792 0.42275 8.98876
394 1QHG ATP 0.009785 0.40906 8.98876
395 1R6D NAD 0.00505 0.40594 8.98876
396 1ZK4 NAP 0.01241 0.40524 8.98876
397 1ZK4 AC0 0.01241 0.40524 8.98876
398 1EP2 ORO 0.0002676 0.43021 9.1954
399 1EP2 FMN 0.0004198 0.41503 9.1954
400 1EP2 FAD 0.0005529 0.40367 9.1954
401 1APZ ASP 0.01151 0.42607 9.21986
402 2XTZ GSP 0.0000000002669 0.69053 9.55056
403 2WJG GDP 0.0000001498 0.6587 9.55056
404 1MKY GDP 0.0000000008887 0.55783 9.55056
405 1PUJ GNP 0.00000005685 0.54123 9.55056
406 3LTW HLZ 0.002118 0.45077 9.55056
407 3KJI ADP 0.00005603 0.44185 9.55056
408 1L2T ATP 0.001236 0.42715 9.55056
409 1YS4 NAP 0.0001189 0.41896 9.55056
410 4PNI KQQ 0.0005468 0.40637 9.55056
411 1FIQ FAD 0.001688 0.40436 9.55056
412 3FB4 AP5 0.01069 0.40207 9.55056
413 1FIQ SAL 0.001882 0.40028 9.55056
414 1FIQ MTE 0.001545 0.40028 9.55056
415 1B7T ADP 0.0003028 0.48395 9.61539
416 4H1V GNP 0.0000006269 0.59474 10.1124
417 4COQ SAN 0.000895 0.46782 10.1124
418 1P9B GDP 0.0004095 0.46781 10.1124
419 3T31 DCQ 0.0001465 0.46205 10.1124
420 3T31 FAD 0.00013 0.46205 10.1124
421 2V6O FAD 0.0006646 0.44932 10.1124
422 3NFZ 3NF 0.0007252 0.44074 10.1124
423 3RFV NAI 0.0001259 0.43136 10.1124
424 2O2C G6Q 0.001513 0.41905 10.1124
425 2NLI LAC 0.002409 0.41462 10.1124
426 2NLI FMN 0.002409 0.41462 10.1124
427 1LVG ADP 0.00002225 0.40903 10.1124
428 3KTA AP5 0.007236 0.41512 10.4046
429 2BES RES 0.0009605 0.436 10.4651
430 4B47 GDP 0.0000000007891 0.78449 10.6742
431 1GOJ ADP 0.00001653 0.58269 10.6742
432 1Z45 NAD 0.00008602 0.43994 10.6742
433 3MAG 3MA 0.01787 0.43386 10.6742
434 1YBH FAD 0.0004276 0.42993 10.6742
435 2YVF FAD 0.001464 0.42934 10.6742
436 2YVF NAD 0.00171 0.4277 10.6742
437 3MAG SAH 0.000509 0.42281 10.6742
438 2QEN ADP 0.0003362 0.41729 10.6742
439 1C3V NDP 0.001339 0.40365 10.6742
440 1KK8 BEF ADP 0.00005564 0.5069 10.7914
441 2V7Q ATP 0.0002625 0.48688 11.236
442 2V7Q ADP 0.002875 0.44707 11.236
443 1E4E PHY 0.0007865 0.42947 11.236
444 3F3E LEU 0.0005742 0.42331 11.236
445 2XVE FAD 0.002742 0.42042 11.236
446 4OYA 1VE 0.008053 0.41993 11.236
447 3RO7 TDR 0.008974 0.41681 11.236
448 2BIF ANP 0.00421 0.41235 11.236
449 2BIF SIN 0.007387 0.41185 11.236
450 1W0J ADP 0.0004143 0.40991 11.236
451 1B4P GPS 0.001931 0.407 11.236
452 2CK3 ANP 0.007668 0.40696 11.236
453 3CX8 GSP 0.0000000005768 0.64209 11.7978
454 3AB3 GDP 0.00000003465 0.57739 11.7978
455 1DAR GDP 0.00000002303 0.5231 11.7978
456 1Z44 NPO 0.01203 0.45194 11.7978
457 1B0U ATP 0.001914 0.44178 11.7978
458 1Z48 FMN 0.0007057 0.43119 11.7978
459 1Z44 FMN 0.001711 0.42155 11.7978
460 4LHM AZZ 0.007407 0.42034 11.7978
461 1Z41 FMN 0.001897 0.41544 11.7978
462 3RC3 ANP 0.02016 0.40907 11.7978
463 1SOW NAD 0.001079 0.40801 11.7978
464 3BW2 FMN 0.0008846 0.40794 11.7978
465 4QVH COA 0.001007 0.40239 11.7978
466 3VX3 ADP 0.0005992 0.4559 12.3596
467 3BFX A3P 0.003801 0.42045 12.3596
468 2Q1S NAI 0.00196 0.41217 12.3596
469 1W7J ADP BEF 0.00006384 0.50421 12.5828
470 1KDK DHT 0.0002277 0.41215 12.9944
471 1TQ4 GDP 0.0000002882 0.59514 13.4831
472 2GDJ ANP 0.001822 0.45686 13.4831
473 1ZUI SKM 0.0006167 0.44962 13.4831
474 1TDF NAP 0.001535 0.43485 13.4831
475 1TDF FAD 0.0005122 0.43485 13.4831
476 1REO FAD 0.0008546 0.41997 13.4831
477 4TSK NDP 0.007522 0.40211 13.4831
478 3QV9 QV7 0.0008153 0.46257 14.0449
479 1H82 FAD 0.001525 0.42642 14.0449
480 1H82 GZZ 0.001771 0.42642 14.0449
481 2AEB ABH 0.001231 0.40816 14.0449
482 1YTM ATP 0.003339 0.41936 14.6067
483 3QF7 ANP 0.003946 0.41092 14.6067
484 2FWP CIT 0.001698 0.40037 14.6067
485 1LNX URI 0.002351 0.4364 14.8148
486 4CCO OGA 0.008491 0.4126 15
487 1YRB GDP 0.000000002745 0.71107 15.1685
488 2VBQ BSJ 0.0007101 0.41652 15.1685
489 4OI4 ATP 0.003868 0.41002 15.1685
490 2YB9 HA0 0.001058 0.40548 15.1685
491 1ECC PCP 0.0005101 0.40417 15.1685
492 1E5F PLP 0.004543 0.40151 15.1685
493 3ZZS TRP 0.001995 0.40323 15.3846
494 1QHH ATP 0.004488 0.43298 15.6522
495 1SKQ GDP 0.00000005283 0.69201 15.7303
496 1F1V DHY 0.003673 0.42289 15.7303
497 2ZJF BSU 0.003332 0.41967 15.7303
498 2FYU FDN 0.001166 0.41461 16.129
499 2ZFI ADP 0.00007393 0.52564 16.2921
500 2BLE 5GP 0.001063 0.43349 16.2921
501 1Z6T ADP 0.003829 0.42401 16.2921
502 1WF3 GNP 0.00000002142 0.61704 16.8539
503 1JWY GDP 0.00000382 0.56622 16.8539
504 1G3Q ADP 0.0001019 0.51231 16.8539
505 1JWY ADP 0.0001027 0.51215 16.8539
506 2ZR9 DTP 0.0003498 0.49229 16.8539
507 4OB6 S2T 0.002387 0.41177 16.8539
508 3A4M ADP 0.000116 0.53001 17.9775
509 1MZV AMP 0.004114 0.416 17.9775
510 2HNK SAH 0.001546 0.40648 17.9775
511 1VHT BA3 0.0006313 0.46891 18.3486
512 1XP8 AGS 0.001283 0.46987 18.5393
513 2NVK NAP 0.000261 0.47705 19.6629
514 3I0O ADP 0.002747 0.42303 19.6629
515 3I0O SMI 0.0211 0.4002 19.6629
516 2PR5 FMN 0.002889 0.40092 19.697
517 2BEK ATP 0.002003 0.42537 20.2247
518 3A1I UNU 0.004353 0.41502 20.7865
519 4GYW UDP 0.001245 0.40602 21.9101
520 3FC4 EDO 0.0001846 0.45583 22.4719
521 1ION ADP 0.0001508 0.41983 22.4719
522 4HSE ADP 0.003077 0.4409 23.0337
523 4V0K GDP 0.000000397 0.56959 24.2604
524 1M2O GNP 0.000000009526 0.62841 25.2809
525 2Q8H TF4 0.00136 0.48383 25.8427
526 1F2U ATP 0.002592 0.41253 26.3514
527 3A1S GDP 0.0000005931 0.62011 26.4045
528 2QTV GNP 0.00000000815 0.62371 26.9461
529 4M9Q GNP 0.00000000002534 0.76013 29.7753
530 1YZG GDP 0.000000008114 0.54548 29.7753
531 1FZQ GDP 0.000000003213 0.74113 29.8343
532 1KSH GDP 0.00000000001939 0.69026 30.3371
533 1F6B GDP 0.00000007377 0.66377 30.3371
534 1MR3 G3D 0.00000001001 0.54335 31.4607
535 1E96 GTP 0.00000000001 0.7476 32.0225
536 1ZJ6 G3D 0.000000015 0.69714 32.0225
537 1UPT GTP 0.00000000006908 0.68229 32.1637
538 2W2X GSP 0.00000000005702 0.676 32.5843
539 1HE1 GDP 0.00000001346 0.65267 32.9545
540 1HE1 AF3 0.0002175 0.51581 32.9545
541 1O3Y GTP 0.0000000006007 0.69303 33.1325
542 1I4D GDP 0.000000002423 0.75981 33.1461
543 2FJU GSP 0.00000000003033 0.68629 33.1461
544 3REF GDP 0.00000001214 0.64653 33.1461
545 1G4U GDP 0.0000001554 0.61421 33.1461
546 1G4U AF3 0.0005948 0.49845 33.1461
547 1R4A GNP 0.00000000003529 0.73476 33.3333
548 1DS6 GDP 0.000000002038 0.55193 33.7079
549 1S9D GDP 0.00000003207 0.68122 34.1463
550 1RE0 GDP 0.000000005816 0.52895 34.1463
551 1NF3 GNP 0.0001002 0.50263 34.2697
552 2A5F GTP 0.000000000788 0.66303 34.2857
553 1GRN GDP 0.0000000008163 0.72483 34.8315
554 4DID GDP 0.00000001934 0.69181 34.8315
555 1GRN AF3 0.000003022 0.61236 34.8315
556 2NGR GDP 0.0000000002166 0.59615 34.8315
557 4ITR GDP 0.0000001315 0.54225 34.8315
558 2NGR AF3 0.000001489 0.44923 34.8315
559 2G77 GDP 0.0000000003517 0.74132 35.3933
560 2G77 AF3 0.000004617 0.6089 35.3933
561 2CJW GDP 0.0000000002823 0.79331 37.0787
562 3DEF GDP 0.000008559 0.55007 37.6404
563 1J2J GTP 0.000000000222 0.711 37.7778
564 3T12 GDP ALF 0.000000005284 0.66183 38.764
565 2GCO GNP 0.000000001522 0.60423 38.764
566 3T1O GDP 0.0000002675 0.51449 38.764
567 2GJ8 ALF GDP 0.00004642 0.51308 38.9535
568 1Z0J GTP 0.0000000000001875 0.79822 41.1765
569 3T5G GDP 0.000000001541 0.58005 42.1348
570 4HDO GNP 0.0000000000007661 0.77515 43.1138
571 1GUA GNP 0.0000000000004921 0.78253 43.7126
572 1CXZ GSP 0.00000000006713 0.6852 43.8202
573 2ZEJ GDP 0.000003273 0.52918 43.8202
574 1TX4 ALF GDP 0.0000000001534 0.71767 44.0678
575 1ZD9 GDP 0.00000000007787 0.75989 44.382
576 4D0N GDP 0.000000003534 0.54691 44.382
577 3ZS9 ADP ALF 0.0002721 0.44421 44.7368
578 3BC1 GNP 0.00000000000006395 0.83539 45.5056
579 5TAR GDP 0.00005116 0.55061 45.9459
580 2A9K GDP 0.000000000707 0.61347 46.6292
581 1ZC3 GNP 0.0000000000001265 0.8274 46.8571
582 2BCG GDP 0.000000001013 0.71069 48.3146
583 1VG0 GDP 0.00000000007663 0.63234 49.4382
584 1VG9 GDP 0.00000000004459 0.61089 49.4382
585 4K81 GTP 0.0000000000006731 0.80174 49.7076
586 2C5L GTP 0.000000000001103 0.76924 49.711
587 3M1I GTP 0.000000000001289 0.78683 50
588 1Z0K GTP 0.00000000001027 0.76647 50
Pocket No.: 2; Query (leader) PDB : 3E5H; Ligand: GNP; Similar sites found: 47
This union binding pocket(no: 2) in the query (biounit: 3e5h.bio2) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4Q1A 2XZ 0.02047 0.43388 1.68539
2 4Q1A UDP 0.02047 0.43388 1.68539
3 4YS0 ADP 0.006483 0.41367 1.68539
4 5CK5 GDP 0.00000006337 0.50118 2.80899
5 2OFW ADX 0.004903 0.41539 2.80899
6 4R43 GDP 0.004637 0.43679 3.37079
7 1NHX FTB 0.01036 0.40647 3.37079
8 1NHX PEP 0.01001 0.40618 3.37079
9 5TDC NMM ILE PHE SER 0.01438 0.42608 3.94737
10 4PJ3 ANP 0.004466 0.42481 4.49438
11 4WZ6 ATP 0.000586 0.49772 5.05618
12 5I34 GDP 0.0001039 0.42233 5.05618
13 4PFO ADP 0.0003208 0.44726 5.61798
14 2VB6 ADP BEF 0.0002018 0.44471 5.61798
15 2I4I AMP 0.003966 0.42332 5.61798
16 5X40 ACP 0.002738 0.40111 5.61798
17 4RD0 GDP 0.00000000009478 0.67719 6.74157
18 5I0H ADP BEF 0.000002062 0.50681 6.74157
19 5KSZ GCP 0.000003329 0.47673 6.74157
20 5FG3 GDP 0.0000000004592 0.5535 7.30337
21 2WOJ ADP ALF 0.0004216 0.43701 7.30337
22 4U60 SIA GAL NGA 0.007565 0.4343 7.30337
23 5L3W GDP 0.00009568 0.4252 7.30337
24 4U60 SIA 0.01391 0.41776 7.30337
25 2PEZ GGZ 0.004627 0.40938 7.30337
26 4U60 SIA GAL BGC NGA GAL 0.02633 0.40313 7.30337
27 5L3S GNP 0.00008822 0.46492 7.86517
28 5L3V GDP 0.00001461 0.4522 7.86517
29 5BQ5 ADP BEF 0.003033 0.43676 7.86517
30 4BQS K2Q 0.005053 0.41147 7.95455
31 1TAD ALF 0.000000002707 0.65869 8.42697
32 4ZG4 VO4 ADP 0.000008444 0.49762 8.42697
33 2ODE ALF GDP 0.000000001181 0.67333 8.98876
34 5N69 ADP 0.0002533 0.41263 10.1124
35 4IDN GNP 0.0004483 0.45294 11.7978
36 4XTR ATP 0.0004018 0.43496 12.9213
37 4XVU ATP 0.0004161 0.43445 12.9213
38 4XTR ADP 0.0008363 0.41055 12.9213
39 5M04 GDP 0.000000006145 0.53113 21.9101
40 5MZN ADP 0.003253 0.45471 22.4719
41 4R98 GNH 0.000004553 0.46223 25.2809
42 5KUT GDP 0.0000002695 0.49607 29.2135
43 5HPY GDP 0.0000000006623 0.61515 43.8202
44 1OW3 GDP 0.000000001437 0.6054 43.8202
45 5IRC GDP 0.000000005672 0.5627 43.8202
46 5TB5 GDP 0.0000000002463 0.60185 45.9459
47 5XCO GDP 0.0000000005394 0.60572 49.7076
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