-->
Receptor
PDB id Resolution Class Description Source Keywords
3EDF 1.65 Å EC: 3.2.1.54 STRUCTURAL BASE FOR CYCLODEXTRIN HYDROLYSIS FLAVOBACTERIUM SP. 92 ALPHA-CYCLODEXTRIN COMPLEX GLYCOSIDASE HYDROLASE
Ref.: STRUCTURAL BASE FOR ENZYMATIC CYCLODEXTRIN HYDROLYS J.MOL.BIOL. V. 385 606 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ACX A:701;
B:701;
Valid;
Valid;
none;
none;
submit data
972.844 C36 H60 O30 C([C@...
CA A:602;
A:603;
B:602;
B:603;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
40.078 Ca [Ca+2...
CE6 A:700;
B:700;
Valid;
Valid;
none;
none;
submit data
990.859 C36 H62 O31 C(C1C...
GOL A:800;
A:801;
B:800;
B:801;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3EDF 1.65 Å EC: 3.2.1.54 STRUCTURAL BASE FOR CYCLODEXTRIN HYDROLYSIS FLAVOBACTERIUM SP. 92 ALPHA-CYCLODEXTRIN COMPLEX GLYCOSIDASE HYDROLASE
Ref.: STRUCTURAL BASE FOR ENZYMATIC CYCLODEXTRIN HYDROLYS J.MOL.BIOL. V. 385 606 2009
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 3EDK - CE8 C48 H82 O41 C([C@@H]1[....
2 3EDJ - BCD C42 H70 O35 C([C@@H]1[....
3 3EDF - CE6 C36 H62 O31 C(C1C(C(C(....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 3EDK - CE8 C48 H82 O41 C([C@@H]1[....
2 3EDJ - BCD C42 H70 O35 C([C@@H]1[....
3 3EDF - CE6 C36 H62 O31 C(C1C(C(C(....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 3EDK - CE8 C48 H82 O41 C([C@@H]1[....
2 3EDJ - BCD C42 H70 O35 C([C@@H]1[....
3 3EDF - CE6 C36 H62 O31 C(C1C(C(C(....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ACX; Similar ligands found: 8
No: Ligand ECFP6 Tc MDL keys Tc
1 RCD 1 1
2 BCD 1 1
3 GLC GLC GLC GLC GLC GLC 1 1
4 GLC GLC GLC GLC GLC GLC GLC 1 1
5 GLC GLC GLC GLC GLC GLC GLC GLC 1 1
6 ACX 1 1
7 4CQ 0.529412 0.911765
8 GLC GLC GLC GLC 0.510638 0.939394
Ligand no: 2; Ligand: CE6; Similar ligands found: 322
No: Ligand ECFP6 Tc MDL keys Tc
1 GLC BGC GLC 1 1
2 CE8 1 1
3 BGC GLC GLC GLC 1 1
4 CT3 1 1
5 GLA GAL GLC 1 1
6 MAN MAN BMA BMA BMA BMA 1 1
7 BGC GLC GLC 1 1
8 BGC BGC BGC BGC 1 1
9 GLC BGC BGC BGC BGC BGC 1 1
10 GLC BGC BGC 1 1
11 GLC GLC GLC GLC GLC GLC GLC GLC GLC 1 1
12 BGC GLC GLC GLC GLC 1 1
13 B4G 1 1
14 CEY 1 1
15 GLC GLC BGC 1 1
16 MAN BMA BMA BMA BMA 1 1
17 MLR 1 1
18 GAL GAL GAL 1 1
19 BGC BGC BGC BGC BGC BGC 1 1
20 MAN BMA BMA BMA BMA BMA 1 1
21 GLC BGC BGC BGC 1 1
22 CTT 1 1
23 DXI 1 1
24 CEX 1 1
25 CE5 1 1
26 GLC GLC GLC GLC GLC 1 1
27 BMA MAN BMA 1 1
28 CE6 1 1
29 BGC BGC BGC BGC BGC BGC BGC BGC BGC 1 1
30 GLA GAL BGC 1 1
31 BMA BMA BMA 1 1
32 MTT 1 1
33 MAN BMA BMA 1 1
34 GLC GAL GAL 1 1
35 BGC BGC BGC 1 1
36 BGC BGC BGC BGC BGC 1 1
37 BGC GLC GLC GLC GLC GLC GLC 1 1
38 BGC BGC GLC 1 1
39 BMA BMA BMA BMA BMA BMA 1 1
40 BMA BMA BMA BMA BMA 1 1
41 CTR 1 1
42 GLC BGC BGC BGC BGC 1 1
43 BGC BGC BGC GLC 1 1
44 MT7 1 1
45 LBT 0.909091 1
46 BMA GAL 0.909091 1
47 GLA GLA 0.909091 1
48 CBI 0.909091 1
49 LAT 0.909091 1
50 BGC GAL 0.909091 1
51 BGC BMA 0.909091 1
52 GLC GAL 0.909091 1
53 MAL 0.909091 1
54 GLA GAL 0.909091 1
55 B2G 0.909091 1
56 GAL BGC 0.909091 1
57 CBK 0.909091 1
58 MAB 0.909091 1
59 N9S 0.909091 1
60 BGC BGC BGC BGC BGC BGC BGC BGC 0.830189 1
61 LAT GLA 0.765957 1
62 BMA BMA GLA BMA BMA 0.758621 1
63 GLA GAL GAL 0.754717 1
64 GLC GLC GLC BGC 0.741379 1
65 BMA BMA BMA BMA 0.672414 0.941176
66 MMA MAN 0.653846 0.942857
67 DR5 0.653846 0.942857
68 NGA GAL BGC 0.650794 0.733333
69 GLA EGA 0.648148 0.942857
70 XYS BGC BGC XYS BGC XYS BGC BGC BGC 0.647059 0.942857
71 XYS BGC BGC BGC BGC XYS BGC BGC BGC 0.647059 0.942857
72 BGC BGC BGC XYS BGC BGC 0.647059 0.942857
73 XYT 0.637931 0.767442
74 ABD 0.637681 0.75
75 GAL NGA GLA BGC GAL 0.628571 0.733333
76 GLC GLC XYP 0.622951 1
77 GLA GAL BGC 5VQ 0.62069 0.891892
78 G2F BGC BGC BGC BGC BGC 0.616667 0.868421
79 BGC BGC XYS BGC 0.61194 0.942857
80 MAL EDO 0.607143 0.942857
81 U63 0.6 0.891892
82 BGC BGC BGC XYS GAL 0.6 0.942857
83 NGA GLA GAL BGC 0.591549 0.733333
84 GLA GAL GLC NBU 0.590164 0.846154
85 M3M 0.584906 1
86 LB2 0.584906 1
87 NGR 0.584906 1
88 MAN GLC 0.584906 1
89 BGC BGC BGC FRU 0.580645 0.868421
90 LAT NAG GAL 0.577465 0.733333
91 GLC GAL NAG GAL 0.577465 0.733333
92 BGC GLA GAL FUC 0.573529 0.970588
93 G2I 0.571429 0.767442
94 LAT FUC 0.571429 0.970588
95 GAL FUC 0.571429 0.941176
96 BGC GAL NAG GAL 0.571429 0.733333
97 OXZ BGC BGC 0.571429 0.6875
98 GAL NAG GAL GLC 0.571429 0.733333
99 BGC GAL FUC 0.571429 0.970588
100 FUC GAL GLC 0.571429 0.970588
101 GLC GLC G6D ACI GLC GLC GLC 0.571429 0.733333
102 G3I 0.571429 0.767442
103 GLC GAL FUC 0.571429 0.970588
104 8B7 0.571429 0.970588
105 2M4 0.566038 1
106 BQZ 0.56 0.909091
107 GLC GLC XYS 0.553846 0.970588
108 SOR GLC GLC GLC 0.545455 0.970588
109 GLO GLC GLC GLC 0.545455 0.970588
110 BGC BGC BGC XYS BGC XYS GAL 0.545455 0.942857
111 LAG 0.545455 0.6
112 GAL BGC BGC BGC XYS BGC XYS 0.545455 0.942857
113 GLC GLC DAF BGC 0.54321 0.702128
114 GLC GLC AGL HMC GLC 0.54321 0.702128
115 ARE 0.54321 0.733333
116 ACR GLC GLC GLC 0.54321 0.702128
117 GLC GLC ACI G6D GLC GLC 0.54321 0.702128
118 AAO 0.54321 0.733333
119 GLC BGC BGC XYS BGC XYS XYS 0.541667 0.942857
120 BGC BGC XYS BGC XYS BGC XYS 0.541667 0.942857
121 BGC BGC BGC XYS BGC XYS XYS 0.541667 0.942857
122 GAL NDG 0.540984 0.733333
123 NLC 0.540984 0.733333
124 5GO 0.540984 0.66
125 NDG GAL 0.540984 0.733333
126 GAL BGC BGC XYS 0.536232 0.942857
127 BGC BGC BGC GLC BGC BGC 0.534483 1
128 GLC BGC BGC BGC BGC BGC BGC 0.534483 1
129 DEL 0.534483 0.970588
130 MVP 0.533333 0.733333
131 SGA BGC 0.532258 0.66
132 TRE 0.531915 1
133 BGC BGC 0.526316 0.914286
134 BMA BMA 0.526316 0.914286
135 LMT 0.523077 0.785714
136 LMU 0.523077 0.785714
137 UMQ 0.523077 0.785714
138 DMU 0.523077 0.785714
139 NAG GAL BGC 0.521127 0.733333
140 GLC ACI GLD GLC 0.519481 0.733333
141 GLC G6D ACI GLC 0.519481 0.733333
142 GLC G6D ADH GLC 0.519481 0.733333
143 GLC ACI G6D BGC 0.519481 0.733333
144 GAL XYS XYS BGC BGC BGC XYS GAL BGC 0.518519 0.942857
145 GAL BGC BGC BGC XYS XYS 0.518519 0.942857
146 GLC BGC BGC XYS BGC XYS XYS GAL 0.518519 0.942857
147 GLC BGC BGC XYS BGC XYS XYS GAL GAL 0.518519 0.942857
148 BGC BGC XYS BGC GAL XYS BGC XYS GAL 0.518519 0.942857
149 BMA MAN MAN MAN 0.516129 1
150 FUC BGC GAL 0.515625 0.970588
151 SOR GLC GLC 0.515152 0.970588
152 RCB 0.514286 0.622642
153 GAL BGC NAG GAL 0.513889 0.733333
154 GLA MBG 0.509091 0.942857
155 ACI GLD GLC GAL 0.506667 0.733333
156 DAF GLC GLC 0.506667 0.733333
157 DAF BGC GLC 0.506667 0.733333
158 6UZ 0.5 0.846154
159 TXT 0.5 0.767442
160 GAC 0.5 0.767442
161 BMA BMA MAN 0.5 1
162 MAN MAN BMA 0.5 1
163 GLC ACI GLD GAL 0.493827 0.702128
164 GLC ACI G6D GLC 0.493827 0.702128
165 QV4 0.493827 0.733333
166 GLC GLC GLC PO4 SGC GLC 0.487805 0.66
167 NPJ 0.485714 0.622642
168 MAN BMA MAN 0.484375 1
169 ACR 0.481013 0.733333
170 QPS 0.481013 0.733333
171 4MU BGC BGC BGC BGC 0.480519 0.767442
172 GAL NAG MAN 0.478873 0.733333
173 DOM 0.474576 0.942857
174 GLO GLC GLC 0.472222 0.942857
175 GLA GAL NAG 0.471429 0.733333
176 10M 0.471429 0.733333
177 MAN BMA NAG 0.471429 0.733333
178 GAL GAL SO4 0.469697 0.66
179 8VZ 0.46875 0.673469
180 FMO 0.467742 0.868421
181 4MU BGC BGC 0.467532 0.767442
182 BGC BGC SGC MGL 0.465753 0.868421
183 MGL SGC GLC GLC 0.465753 0.868421
184 CM5 0.465753 0.891892
185 MGL SGC BGC BGC 0.465753 0.868421
186 ACR GLC 0.4625 0.702128
187 ACR GLC GLC GLC GLC 0.4625 0.702128
188 NAG GAL GAL NAG GAL 0.460526 0.6875
189 CGC 0.460317 0.941176
190 MA4 0.459459 0.891892
191 5QP 0.459016 0.885714
192 ACI G6D GLC ACI G6D BGC 0.457831 0.702128
193 ACI GLD GLC GLC GLC ACI GLD GLC GAL 0.457831 0.702128
194 BGC GLC AC1 GLC GLC GLC AC1 0.457831 0.702128
195 AC1 GLC AC1 BGC 0.457831 0.702128
196 DAF GLC DAF GLC GLC 0.457831 0.702128
197 ACI GLD GLC ACI G6D BGC 0.457831 0.702128
198 M13 0.457627 0.942857
199 MDM 0.457627 0.942857
200 GAL MBG 0.457627 0.942857
201 RZM 0.457627 0.688889
202 LSE 0.457143 0.6875
203 GLA GAL NAG FUC GAL GLC 0.454545 0.717391
204 G6D GLC ACI GLD GLC ACI GLD GLC BGC 0.453488 0.653061
205 GTM BGC BGC 0.450704 0.868421
206 MAN MAN MAN MAN 0.449275 1
207 MAN MAN BMA MAN 0.449275 1
208 ACG 0.448276 0.695652
209 NAG BMA 0.447761 0.653061
210 FUC GAL NAG GAL BGC 0.447059 0.717391
211 GAL GLC NAG GAL FUC 0.447059 0.717391
212 GLC NAG GAL GAL FUC 0.447059 0.717391
213 GAL A2G 0.446154 0.733333
214 A2G GAL 0.446154 0.733333
215 GAL NGA 0.446154 0.733333
216 BMA MAN MAN MAN MAN 0.444444 1
217 MAN BMA MAN MAN MAN 0.442857 1
218 M5S 0.442857 1
219 NAG GAL GAL NAG 0.441558 0.6875
220 GAL NAG GAL NAG GAL NAG 0.441558 0.673469
221 MAN MAN MAN GLC 0.441176 1
222 GLA GLC 0.440678 1
223 BGC GLA 0.440678 1
224 MAN BMA 0.440678 1
225 BGC GLC 0.440678 1
226 GLA BGC 0.440678 1
227 MAN MAN 0.440678 1
228 GLC BGC 0.440678 1
229 BMA MAN 0.440678 1
230 LAK 0.440678 1
231 GAL GAL 0.440678 1
232 BMA GLA 0.440678 1
233 GLA BMA 0.440678 1
234 GAL GLC 0.440678 1
235 MLB 0.440678 1
236 GLC GLC 0.440678 1
237 DAF GLC 0.44 0.733333
238 DAF BGC 0.44 0.733333
239 BGC SGC BGC SGC BGC SGC BGC SGC 0.438356 0.916667
240 TM6 0.438356 0.916667
241 ABL 0.4375 0.702128
242 FRU GAL 0.435484 0.842105
243 BMA FRU 0.435484 0.842105
244 FUC GAL GLA 0.432836 0.970588
245 GLA GAL FUC 0.432836 0.970588
246 GLA GLA FUC 0.432836 0.970588
247 GAL GAL FUC 0.432836 0.970588
248 FUC GLA GLA 0.432836 0.970588
249 BMA IFM 0.428571 0.711111
250 A2G GAL BGC FUC 0.428571 0.717391
251 BGC OXZ 0.428571 0.666667
252 IFM BGC 0.428571 0.711111
253 VAM 0.428571 0.868421
254 IFM BMA 0.428571 0.711111
255 GLF B8D 0.428571 0.775
256 9MR 0.428571 0.744186
257 ISX 0.428571 0.761905
258 BGC GAL NAG GAL FUC FUC 0.426966 0.702128
259 7SA 0.426966 0.702128
260 GLC GAL NAG GAL FUC FUC 0.426966 0.702128
261 MAN MAN MAN BMA MAN 0.426667 1
262 GLC GLC GLC GLC GLC BGC 0.42623 1
263 BMA MAN MAN 0.42623 1
264 GLC GLC GLC 0.42623 1
265 MAN MAN MAN 0.42623 1
266 GLC GLC GLC GLC BGC 0.42623 1
267 NOJ GLC 0.421875 0.695652
268 GLC DMJ 0.421875 0.695652
269 NOY BGC 0.421875 0.702128
270 MAN MNM 0.421875 0.702128
271 PA1 GCS 0.419355 0.767442
272 GCS GCS 0.419355 0.767442
273 HMC AGL GLC 0.417722 0.717391
274 3SA 0.417722 0.733333
275 GAL 0.416667 0.848485
276 GXL 0.416667 0.848485
277 ALL 0.416667 0.848485
278 6SA 0.416667 0.733333
279 GLA 0.416667 0.848485
280 GLC 0.416667 0.848485
281 MAN 0.416667 0.848485
282 XZZ BGC BGC 0.416667 0.702128
283 WOO 0.416667 0.848485
284 BMA 0.416667 0.848485
285 BGC 0.416667 0.848485
286 GIV 0.416667 0.848485
287 HSD G6D GLC HSD G6D GLC BGC 0.41573 0.673469
288 ACI G6D GLC ACI G6D GLC GLC 0.41573 0.673469
289 HSD G6D GLC HSD G6D GLC GLC 0.41573 0.673469
290 ACI GLD GLC ACI GLD GLC ACI GLD GLC GLC 0.41573 0.673469
291 GAL NAG GAL 0.415584 0.702128
292 GCS GCS GCS GCS GCS 0.415385 0.767442
293 GCS GCS GCS GCS GCS GCS 0.415385 0.767442
294 GCS GCS GCS 0.415385 0.767442
295 P3M 0.414286 0.767442
296 MAN DGO 0.412698 0.914286
297 AGL GLC HMC AGL GLC BGC 0.411111 0.653061
298 NAG NDG BMA 0.410256 0.634615
299 NAG NAG BMA 0.410256 0.634615
300 T6P 0.409836 0.767442
301 GDQ GLC 0.409091 0.666667
302 MAN G63 0.409091 0.653061
303 FUC BGC GAL NAG GAL 0.409091 0.717391
304 AMG 0.403846 0.857143
305 GYP 0.403846 0.857143
306 MMA 0.403846 0.857143
307 MBG 0.403846 0.857143
308 MAN 7D1 0.403226 0.888889
309 GAL MGC 0.402985 0.702128
310 BGC BGC XYS BGC XYS GAL 0.4 0.916667
311 Z6J 0.4 0.742857
312 RIB 0.4 0.742857
313 FUC NDG GAL 0.4 0.717391
314 A2G MBG 0.4 0.702128
315 A2G GAL NAG FUC GAL GLC 0.4 0.673469
316 AHR 0.4 0.742857
317 GLC GAL NAG GAL FUC A2G 0.4 0.673469
318 MAN MAN MAN MAN MAN MAN MAN 0.4 1
319 GAL NDG FUC 0.4 0.717391
320 FUB 0.4 0.742857
321 32O 0.4 0.742857
322 MBG A2G 0.4 0.702128
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3EDF; Ligand: ACX; Similar sites found with APoc: 53
This union binding pocket(no: 1) in the query (biounit: 3edf.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 2JC9 ADN 1.08108
2 1GJW MAL 2.99501
3 3KLL MAL 3.66057
4 5CGM MAL 3.66057
5 4TVD BGC 3.66057
6 1PIG AGL GLC HMC AGL GLC BGC 3.83065
7 1G94 DAF GLC DAF GLC GLC 4.01786
8 4W93 3L9 4.03226
9 4S3R 7SA 4.15973
10 2GDV BGC 4.56349
11 1ESW ACR 4.6
12 3BC9 G6D GLC ACI GLD GLC ACI GLD GLC BGC 4.67446
13 1O5Q PYR 4.91803
14 5JBE GLC GLC GLC GLC GLC 5.32446
15 4U31 MVP 6.82196
16 3CZG GLC 8.15308
17 6BS6 GLC GLC GLC GLC GLC GLC GLC 8.31947
18 6BS6 GLC GLC GLC GLC 8.31947
19 3UER BTU 8.31947
20 3UER TUR 8.31947
21 1JDC GLC GLC GLC GLC 8.85781
22 3TTY GLA 9.65058
23 2FHF GLC GLC GLC GLC 10.1498
24 1JG9 GLC 11.3057
25 3AXI GLC 13.4775
26 1E3Z ACI GLD GLC ACI GLD GLC ACI GLD GLC GLC 14.0787
27 5ZCE MTT 14.4144
28 1UA7 ACI GLD GLC ACI G6D BGC 15.6398
29 2GJP BGC GLC DAF GLC GLC GLC DAF 15.8763
30 3WY2 BGC 16.171
31 2D3N GLC GLC GLC GLC GLC GLC 16.701
32 2D3N GLC GLC GLC GLC 16.701
33 2D3N GLC 16.701
34 5WCZ NOJ 19.1126
35 4HPH SUC 25.0447
36 3GBE NOJ 25.8065
37 2PWG CTS 26.7986
38 5DO8 BGC 26.8468
39 2ZID GLC GLC GLC 27.4401
40 5BRP PNG 27.6408
41 1UH4 GLC GLC GLC 32.1131
42 8CGT TM6 32.6123
43 2CXG GLC G6D ACI GLC 32.7787
44 1UKQ GLC ACI G6D GLC 33.4443
45 1J0I GLC GLC GLC 33.5034
46 3BMW GLC GLC G6D ACI GLC GLC GLC 33.777
47 3VM7 GLC 34.1463
48 1QHO ABD 34.4426
49 1VB9 GLC GLC GLC GLC GLC GLC 35.7265
50 1LWJ ACG 36.5079
51 5A2B MAL 38.2294
52 6A0J GLC GLC GLC GLC 44.7983
53 4E2O ACI G6D GLC ACI G6D BGC 46.9163
Pocket No.: 2; Query (leader) PDB : 3EDF; Ligand: CE6; Similar sites found with APoc: 55
This union binding pocket(no: 2) in the query (biounit: 3edf.bio1) has 23 residues
No: Leader PDB Ligand Sequence Similarity
1 2JC9 ADN 1.08108
2 1GJW MAL 2.99501
3 5CGM MAL 3.66057
4 3KLL MAL 3.66057
5 4TVD BGC 3.66057
6 1PIG AGL GLC HMC AGL GLC BGC 3.83065
7 1G94 DAF GLC DAF GLC GLC 4.01786
8 4W93 3L9 4.03226
9 4S3R 7SA 4.15973
10 2GDV BGC 4.56349
11 1ESW ACR 4.6
12 3BC9 G6D GLC ACI GLD GLC ACI GLD GLC BGC 4.67446
13 1O5Q PYR 4.91803
14 5JBE GLC GLC GLC GLC GLC 5.32446
15 4U31 MVP 6.82196
16 2ZFZ ARG 7.59494
17 3CZG GLC 8.15308
18 6BS6 GLC GLC GLC GLC GLC GLC GLC 8.31947
19 6BS6 GLC GLC GLC GLC 8.31947
20 3UER BTU 8.31947
21 3UER TUR 8.31947
22 1JDC GLC GLC GLC GLC 8.85781
23 3TTY GLA 9.65058
24 2FHF GLC GLC GLC GLC 10.1498
25 1JG9 GLC 11.3057
26 3AXI GLC 13.4775
27 1E3Z ACI GLD GLC ACI GLD GLC ACI GLD GLC GLC 14.0787
28 5ZCE MTT 14.4144
29 1UA7 ACI GLD GLC ACI G6D BGC 15.6398
30 2GJP BGC GLC DAF GLC GLC GLC DAF 15.8763
31 3WY2 BGC 16.171
32 2D3N GLC GLC GLC GLC GLC GLC 16.701
33 2D3N GLC GLC GLC GLC 16.701
34 2D3N GLC 16.701
35 1QFT HSM 18.2857
36 5WCZ NOJ 19.1126
37 4HPH SUC 25.0447
38 3GBE NOJ 25.8065
39 2PWG CTS 26.7986
40 5DO8 BGC 26.8468
41 2ZID GLC GLC GLC 27.4401
42 5BRP PNG 27.6408
43 1UH4 GLC GLC GLC 32.1131
44 8CGT TM6 32.6123
45 2CXG GLC G6D ACI GLC 32.7787
46 1UKQ GLC ACI G6D GLC 33.4443
47 1J0I GLC GLC GLC 33.5034
48 3BMW GLC GLC G6D ACI GLC GLC GLC 33.777
49 3VM7 GLC 34.1463
50 1QHO ABD 34.4426
51 1VB9 GLC GLC GLC GLC GLC GLC 35.7265
52 1LWJ ACG 36.5079
53 5A2B MAL 38.2294
54 6A0J GLC GLC GLC GLC 44.7983
55 4E2O ACI G6D GLC ACI G6D BGC 46.9163
Pocket No.: 3; Query (leader) PDB : 3EDF; Ligand: ACX; Similar sites found with APoc: 6
This union binding pocket(no: 3) in the query (biounit: 3edf.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
1 5WZE PRO 0.884956
2 2WNF CG3 A2G GAL 1.34228
3 4UDK BMA 3.45821
4 5CPS GLC GLC GLC GLC GLC GLC GLC GLC 6.48918
5 5CPS GLC GLC GLC GLC GLC GLC GLC GLC GLC 6.48918
6 3KIV ACA 16.4557
Pocket No.: 4; Query (leader) PDB : 3EDF; Ligand: CE6; Similar sites found with APoc: 6
This union binding pocket(no: 4) in the query (biounit: 3edf.bio1) has 21 residues
No: Leader PDB Ligand Sequence Similarity
1 5WZE PRO 0.884956
2 2WNF CG3 A2G GAL 1.34228
3 4UDK BMA 3.45821
4 3HKA FIX 6.08899
5 5CPS GLC GLC GLC GLC GLC GLC GLC GLC 6.48918
6 3KIV ACA 16.4557
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