Receptor
PDB id Resolution Class Description Source Keywords
3EQO 2.25 Å EC: 3.2.1.58 CRYSTAL STRUCTURE OF BETA-1,3-GLUCANASE FROM PHANEROCHAETE CHRYSOSPORIUM (LAM55A) GLUCONOLACTONE COMPLEX PHANEROCHAETE CHRYSOSPORIUM TANDEM BETA-HELIX DOMAINS GLYCOSIDASE HYDROLASE
Ref.: CRYSTAL STRUCTURE OF GLYCOSIDE HYDROLASE FAMILY 55 -1,3-GLUCANASE FROM THE BASIDIOMYCETE PHANEROCHAETE CHRYSOSPORIUM J.BIOL.CHEM. V. 284 10100 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
LGC A:757;
B:757;
Valid;
Valid;
none;
none;
submit data
178.14 C6 H10 O6 C([C@...
NAG NAG BMA A:753;
B:753;
Part of Protein;
Part of Protein;
none;
none;
submit data
570.545 n/a O=C(N...
ZN A:756;
B:756;
Part of Protein;
Part of Protein;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3EQO 2.25 Å EC: 3.2.1.58 CRYSTAL STRUCTURE OF BETA-1,3-GLUCANASE FROM PHANEROCHAETE CHRYSOSPORIUM (LAM55A) GLUCONOLACTONE COMPLEX PHANEROCHAETE CHRYSOSPORIUM TANDEM BETA-HELIX DOMAINS GLYCOSIDASE HYDROLASE
Ref.: CRYSTAL STRUCTURE OF GLYCOSIDE HYDROLASE FAMILY 55 -1,3-GLUCANASE FROM THE BASIDIOMYCETE PHANEROCHAETE CHRYSOSPORIUM J.BIOL.CHEM. V. 284 10100 2009
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3EQO - LGC C6 H10 O6 C([C@@H]1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3EQO - LGC C6 H10 O6 C([C@@H]1[....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 5M60 - BGC C6 H12 O6 C([C@@H]1[....
2 3EQO - LGC C6 H10 O6 C([C@@H]1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: LGC; Similar ligands found: 3
No: Ligand ECFP6 Tc MDL keys Tc
1 149 1 1
2 LGC 1 1
3 GDL 0.404255 0.714286
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3EQO; Ligand: LGC; Similar sites found: 8
This union binding pocket(no: 1) in the query (biounit: 3eqo.bio2) has 15 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1W1G 4PT 0.004078 0.40102 3.31126
2 4QDC ASD 0.01094 0.4104 3.84615
3 1W6O LAT 0.005258 0.4082 4.47761
4 3FW3 GLC 0.007478 0.42512 5.26316
5 3PE2 E1B 0.02818 0.42086 5.63798
6 1FH8 XYP XIF 0.009136 0.40492 8.01282
7 2J1E NDG GAL 0.007496 0.42064 11.3333
8 1GZW GAL BGC 0.006057 0.40297 13.4328
Pocket No.: 2; Query (leader) PDB : 3EQO; Ligand: LGC; Similar sites found: 6
This union binding pocket(no: 2) in the query (biounit: 3eqo.bio1) has 15 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5AYV KPL 0.04745 0.40141 2.589
2 1Y0G 8PP 0.0467 0.40722 2.6178
3 2ZX7 ZX7 0.0203 0.40092 3.95604
4 1WZ1 DNS 0.01244 0.40553 7.31707
5 3QPB URA 0.01951 0.40087 8.15603
6 5BXV MGP 0.02023 0.40255 22.7273
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