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Receptor
PDB id Resolution Class Description Source Keywords
3EQO 2.25 Å EC: 3.2.1.58 CRYSTAL STRUCTURE OF BETA-1,3-GLUCANASE FROM PHANEROCHAETE CHRYSOSPORIUM (LAM55A) GLUCONOLACTONE COMPLEX PHANEROCHAETE CHRYSOSPORIUM TANDEM BETA-HELIX DOMAINS GLYCOSIDASE HYDROLASE
Ref.: CRYSTAL STRUCTURE OF GLYCOSIDE HYDROLASE FAMILY 55 -1,3-GLUCANASE FROM THE BASIDIOMYCETE PHANEROCHAETE CHRYSOSPORIUM J.BIOL.CHEM. V. 284 10100 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
LGC A:757;
B:757;
Valid;
Valid;
none;
none;
submit data
178.14 C6 H10 O6 C([C@...
NAG NAG BMA A:753;
B:753;
Part of Protein;
Part of Protein;
none;
none;
submit data
570.545 n/a O=C(N...
ZN A:756;
B:756;
Part of Protein;
Part of Protein;
none;
none;
submit data
65.409 Zn [Zn+2...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3EQO 2.25 Å EC: 3.2.1.58 CRYSTAL STRUCTURE OF BETA-1,3-GLUCANASE FROM PHANEROCHAETE CHRYSOSPORIUM (LAM55A) GLUCONOLACTONE COMPLEX PHANEROCHAETE CHRYSOSPORIUM TANDEM BETA-HELIX DOMAINS GLYCOSIDASE HYDROLASE
Ref.: CRYSTAL STRUCTURE OF GLYCOSIDE HYDROLASE FAMILY 55 -1,3-GLUCANASE FROM THE BASIDIOMYCETE PHANEROCHAETE CHRYSOSPORIUM J.BIOL.CHEM. V. 284 10100 2009
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3EQO - LGC C6 H10 O6 C([C@@H]1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3EQO - LGC C6 H10 O6 C([C@@H]1[....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 5M60 - BGC C6 H12 O6 C([C@@H]1[....
2 3EQO - LGC C6 H10 O6 C([C@@H]1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: LGC; Similar ligands found: 4
No: Ligand ECFP6 Tc MDL keys Tc
1 8S0 1 1
2 149 1 1
3 LGC 1 1
4 GDL 0.404255 0.714286
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3EQO; Ligand: LGC; Similar sites found with APoc: 22
This union binding pocket(no: 1) in the query (biounit: 3eqo.bio2) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 4QYS PLP SEP 1.58371
2 4KCF AKM 2.5066
3 4WXG 2BO 2.5066
4 3L4S NAD 2.67857
5 3BZ3 YAM 2.89855
6 1W1G 4PT 3.31126
7 3TM0 B31 3.42205
8 3TM0 ANP 3.42205
9 4QDC ASD 3.84615
10 1UNB AKG 4.18006
11 1UNB PN1 4.18006
12 2YOH WMJ 4.28571
13 5YB7 ORN 4.31034
14 1W6O LAT 4.47761
15 2RH4 EMO 5.05415
16 3FW3 GLC 5.26316
17 2YJ0 420 5.7971
18 1FH8 XYP XIF 8.01282
19 3QPB URA 8.15603
20 2J1E NDG GAL 11.3333
21 5JSD ACY 1GN GAL 1GN BGC ACY GAL BGC 11.822
22 1GZW GAL BGC 13.4328
Pocket No.: 2; Query (leader) PDB : 3EQO; Ligand: LGC; Similar sites found with APoc: 16
This union binding pocket(no: 2) in the query (biounit: 3eqo.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 5A6B OAN 1.38889
2 2F2H XTG 2.24274
3 5AYV KPL 2.589
4 1Y0G 8PP 2.6178
5 6CUZ FEV 3.09278
6 4FHD 0TT 3.26087
7 4FHD EEM 3.26087
8 2ZX7 ZX7 3.95604
9 5VX9 FUC GAL NAG GAL BGC 4.34783
10 4OMJ 2TX 4.67626
11 5ZM4 AKG 5.22876
12 1WZ1 DNS 7.31707
13 5USZ SKE 8.3045
14 5JSD 1GN ACY GAL ACY 1GN BGC GAL BGC 11.822
15 4RJD TFP 12.1212
16 5BXV MGP 22.7273
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