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Receptor
PDB id Resolution Class Description Source Keywords
3GEG 2.1 Å EC: 1.-.-.- FINGERPRINT AND STRUCTURAL ANALYSIS OF A SCOR ENZYME WITH IT COFACTOR FROM CLOSTRIDIUM THERMOCELLUM CLOSTRIDIUM THERMOCELLUM ATCC 27405 SDR SCOR ROSSMANN FOLD OXIDOREDUCTASE
Ref.: SEQUENCE FINGERPRINT AND STRUCTURAL ANALYSIS OF THE ENZYME A3DFK9 FROM CLOSTRIDIUM THERMOCELLUM. PROTEINS V. 78 603 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GOL A:249;
B:249;
Invalid;
Invalid;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
NA A:251;
B:250;
Part of Protein;
Part of Protein;
none;
none;
submit data
22.99 Na [Na+]
NAD A:248;
B:248;
Valid;
Valid;
none;
none;
submit data
663.425 C21 H27 N7 O14 P2 c1cc(...
THJ A:250;
Invalid;
none;
submit data
112.128 O3 S2 [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3GEG 2.1 Å EC: 1.-.-.- FINGERPRINT AND STRUCTURAL ANALYSIS OF A SCOR ENZYME WITH IT COFACTOR FROM CLOSTRIDIUM THERMOCELLUM CLOSTRIDIUM THERMOCELLUM ATCC 27405 SDR SCOR ROSSMANN FOLD OXIDOREDUCTASE
Ref.: SEQUENCE FINGERPRINT AND STRUCTURAL ANALYSIS OF THE ENZYME A3DFK9 FROM CLOSTRIDIUM THERMOCELLUM. PROTEINS V. 78 603 2010
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 318 families.
1 3GEG - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 280 families.
1 3GEG - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 187 families.
1 3GEG - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAD; Similar ligands found: 230
No: Ligand ECFP6 Tc MDL keys Tc
1 A3D 0.872727 0.986111
2 NHD 0.821429 0.972222
3 NAP 0.811966 0.986111
4 NFD 0.791304 0.946667
5 NXX 0.765766 0.972603
6 DND 0.765766 0.972603
7 AMP NAD 0.74359 0.972222
8 ZID 0.737705 0.986111
9 NAQ 0.729508 0.934211
10 NAE 0.721311 0.959459
11 NA0 0.712 0.972603
12 TAP 0.704 0.921053
13 NDE 0.689922 0.972603
14 NAJ 0.683333 0.972222
15 NDC 0.679389 0.934211
16 NDO 0.674603 0.958904
17 N01 0.656 0.972222
18 CNA 0.642276 0.972603
19 NBP 0.621212 0.922078
20 8ID 0.609756 0.922078
21 A2D 0.576923 0.958333
22 ADP 0.575472 0.931507
23 NGD 0.574803 0.922078
24 BA3 0.566038 0.958333
25 M33 0.564815 0.918919
26 ADP PO3 0.563636 0.957747
27 B4P 0.560748 0.958333
28 AP5 0.560748 0.958333
29 AN2 0.555556 0.918919
30 AT4 0.555556 0.894737
31 GAP 0.553571 0.932432
32 OOB 0.551724 0.972222
33 CA0 0.550459 0.932432
34 9JJ 0.546053 0.898734
35 HEJ 0.545455 0.931507
36 ACP 0.545455 0.906667
37 ATP 0.545455 0.931507
38 DQV 0.544 0.972222
39 ADP ALF 0.54386 0.883117
40 ALF ADP 0.54386 0.883117
41 DAL AMP 0.543103 0.945205
42 APR 0.540541 0.931507
43 AQP 0.540541 0.931507
44 AR6 0.540541 0.931507
45 5FA 0.540541 0.931507
46 ADP VO4 0.53913 0.945205
47 VO4 ADP 0.53913 0.945205
48 AD9 0.535714 0.906667
49 SAP 0.535714 0.883117
50 AGS 0.535714 0.883117
51 WAQ 0.533333 0.896104
52 ABM 0.53271 0.905405
53 DLL 0.529412 0.972222
54 00A 0.529412 0.921053
55 ACQ 0.526316 0.906667
56 NJP 0.526316 0.959459
57 ANP 0.526316 0.906667
58 OAD 0.525 0.932432
59 ADX 0.522523 0.839506
60 5AL 0.521739 0.945205
61 A1R 0.521008 0.871795
62 9SN 0.520325 0.909091
63 A 0.518868 0.930556
64 AMP 0.518868 0.930556
65 50T 0.517857 0.893333
66 ATF 0.517241 0.894737
67 1ZZ 0.516393 0.851852
68 3OD 0.516393 0.932432
69 SON 0.513514 0.92
70 PRX 0.513274 0.881579
71 6YZ 0.512821 0.906667
72 SRP 0.512821 0.92
73 9X8 0.512397 0.883117
74 ADP BMA 0.512397 0.932432
75 3UK 0.512397 0.958904
76 MYR AMP 0.512195 0.851852
77 NAJ PZO 0.510949 0.909091
78 NMN 0.509434 0.875
79 A3R 0.508333 0.871795
80 B5V 0.508197 0.945946
81 AMP DBH 0.507937 0.906667
82 A22 0.504202 0.945205
83 ATP A A A 0.504 0.971831
84 B5M 0.504 0.933333
85 FA5 0.504 0.945946
86 8QN 0.5 0.945205
87 NAX 0.496183 0.886076
88 TYR AMP 0.496063 0.933333
89 PR8 0.495935 0.8625
90 AMO 0.495868 0.92
91 ADQ 0.495868 0.932432
92 4AD 0.495868 0.933333
93 PAJ 0.495868 0.873418
94 A12 0.495495 0.894737
95 AP2 0.495495 0.894737
96 AHZ 0.492308 0.851852
97 YAP 0.492063 0.933333
98 FYA 0.491935 0.918919
99 AHX 0.491803 0.884615
100 4UU 0.488372 0.933333
101 5SV 0.487603 0.8375
102 TAT 0.487179 0.894737
103 T99 0.487179 0.894737
104 APC 0.486957 0.894737
105 SRA 0.486239 0.881579
106 6V0 0.484848 0.909091
107 NAI 0.484848 0.921053
108 GTA 0.484615 0.898734
109 A A 0.483871 0.958333
110 LAD 0.483871 0.873418
111 AU1 0.482456 0.906667
112 F2R 0.481752 0.831325
113 OMR 0.481203 0.841463
114 TXE 0.481203 0.921053
115 AF3 ADP 3PG 0.481203 0.873418
116 LAQ 0.480916 0.851852
117 G3A 0.48062 0.909091
118 B5Y 0.480315 0.933333
119 NB8 0.48 0.884615
120 TXA 0.48 0.92
121 BIS 0.48 0.871795
122 ME8 0.48 0.851852
123 PTJ 0.48 0.884615
124 139 0.477941 0.886076
125 LPA AMP 0.477273 0.851852
126 AFH 0.476923 0.873418
127 AR6 AR6 0.476923 0.958333
128 G5P 0.476923 0.909091
129 ARG AMP 0.476923 0.841463
130 25L 0.47619 0.945205
131 NAJ PYZ 0.475524 0.864198
132 25A 0.47541 0.958333
133 9ZA 0.47541 0.896104
134 9ZD 0.47541 0.896104
135 DZD 0.47482 0.897436
136 TXD 0.473684 0.921053
137 4UV 0.472868 0.933333
138 TYM 0.470149 0.945946
139 RBY 0.470085 0.894737
140 ADV 0.470085 0.894737
141 4TA 0.467626 0.864198
142 48N 0.466165 0.884615
143 XAH 0.465116 0.851852
144 4UW 0.462687 0.897436
145 M24 0.461538 0.886076
146 80F 0.460993 0.853659
147 IOT 0.459854 0.821429
148 T5A 0.456522 0.853659
149 EAD 0.455782 0.886076
150 MAP 0.455285 0.883117
151 GA7 0.454545 0.894737
152 BT5 0.453901 0.821429
153 A4P 0.452555 0.833333
154 UP5 0.451852 0.933333
155 PAP 0.445378 0.917808
156 4TC 0.445255 0.909091
157 AP0 0.445255 0.884615
158 YLP 0.444444 0.831325
159 P1H 0.443709 0.864198
160 AOC 0.442478 0.810811
161 Z5A 0.439189 0.833333
162 LMS 0.4375 0.817073
163 2A5 0.436975 0.857143
164 A G 0.43662 0.921053
165 G A A A 0.43662 0.909091
166 COD 0.43662 0.802326
167 ADJ 0.435714 0.841463
168 YLB 0.434783 0.831325
169 YLC 0.434783 0.851852
170 U A G G 0.433566 0.921053
171 ATR 0.433333 0.90411
172 7MD 0.432836 0.851852
173 8X1 0.432 0.764045
174 G5A 0.429752 0.790698
175 PO4 PO4 A A A A PO4 0.429688 0.943662
176 TAD 0.42963 0.873418
177 5AS 0.42735 0.770115
178 BTX 0.426573 0.831325
179 YLA 0.425532 0.831325
180 DSZ 0.425197 0.790698
181 NCN 0.424779 0.805556
182 UPA 0.42446 0.921053
183 8PZ 0.424242 0.811765
184 VMS 0.424 0.8
185 54H 0.424 0.8
186 9K8 0.423077 0.744444
187 N0B 0.422819 0.853659
188 6AD 0.422764 0.85
189 AYB 0.422535 0.821429
190 7D3 0.422414 0.844156
191 YLY 0.421769 0.821429
192 TSB 0.420635 0.809524
193 ODP 0.41958 0.922078
194 AV2 0.419355 0.855263
195 FB0 0.419355 0.775281
196 A5A 0.419355 0.819277
197 NNR 0.419048 0.739726
198 A A A 0.418605 0.918919
199 U A 0.417808 0.946667
200 649 0.417266 0.775281
201 NMN AMP PO4 0.416667 0.933333
202 SSA 0.416 0.790698
203 P5A 0.415385 0.755556
204 LSS 0.414062 0.772727
205 A2R 0.412698 0.918919
206 52H 0.412698 0.790698
207 JB6 0.412214 0.896104
208 5N5 0.411215 0.783784
209 YSA 0.410448 0.811765
210 53H 0.409449 0.790698
211 5CA 0.409449 0.790698
212 ITT 0.408333 0.878378
213 7D4 0.408333 0.844156
214 NA7 0.407692 0.894737
215 LEU LMS 0.407692 0.784091
216 5CD 0.407407 0.794521
217 0WD 0.406897 0.909091
218 A3P 0.40678 0.930556
219 HFD 0.406504 0.883117
220 AVV 0.40625 0.860759
221 RAB 0.40566 0.808219
222 XYA 0.40566 0.808219
223 ADN 0.40566 0.808219
224 FDA 0.405063 0.823529
225 GSU 0.40458 0.790698
226 7MC 0.404255 0.831325
227 NSS 0.403101 0.811765
228 6FA 0.402516 0.853659
229 PPS 0.4 0.817073
230 NVA LMS 0.4 0.784091
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3GEG; Ligand: NAD; Similar sites found with APoc: 964
This union binding pocket(no: 1) in the query (biounit: 3geg.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 2FKA BEF None
2 3FGZ BEF None
3 5KUT GDP None
4 5KKA 6V0 1.21457
5 5TWB FAD 1.21457
6 1NW5 SAM 1.21457
7 3H5N ATP 1.21457
8 5ULP KB1 1.21457
9 4LWP SAH 1.61943
10 3LST SAH 1.61943
11 1GUZ NAD 1.61943
12 5DX1 SFG 1.61943
13 5DXA SFG 1.61943
14 5DX8 SFG 1.61943
15 5DWQ SFG 1.61943
16 5DX0 SFG 1.61943
17 3A25 SAM 1.61943
18 6ARJ BW4 1.61943
19 4UBS DIF 1.61943
20 6ARJ SAH 1.61943
21 1Q0S SAH 1.61943
22 1ZGA SAH 1.68067
23 1WVG APR 2.02429
24 4PNE SAH 2.02429
25 3OA2 NAD 2.02429
26 3A27 SAM 2.02429
27 2NXE SAM 2.02429
28 3MAG SAH 2.02429
29 4W6Z 8ID 2.02429
30 1SOW NAD 2.02429
31 1BC5 SAH 2.02429
32 6CEP NAD 2.02429
33 2PWY SAH 2.02429
34 6CEP OXM 2.02429
35 1HYE NAP 2.02429
36 5UR0 NAD 2.02429
37 1GAD NAD 2.02429
38 3IP6 PRO 2.02429
39 1DSS NAD 2.02429
40 5EOW FAD 2.02429
41 3H9E NAD 2.02429
42 2VYN NAD 2.02429
43 1PZG A3D 2.02429
44 3CIF G3H 2.02429
45 3CMC NAD 2.02429
46 3B20 NAD 2.02429
47 3MCT SAH 2.02429
48 3CIF NAD 2.02429
49 2D2I NAP 2.02429
50 3WQQ IB3 2.02429
51 3WQQ NDP 2.02429
52 1H2B NAJ 2.02429
53 1K3T BRZ 2.02429
54 2QBU SAH 2.15517
55 4IWN GEK 2.18341
56 2DT5 NAD 2.36967
57 1DJL NAP 2.41546
58 3G2O SAM 2.42915
59 3O7W SAM 2.42915
60 5K4W NAI 2.42915
61 3B1F NAD 2.42915
62 5K4W THR 2.42915
63 5JAQ NAI 2.42915
64 2C5A GDC 2.42915
65 2C5A NAD 2.42915
66 3GWZ SAH 2.42915
67 3E1T FAD 2.42915
68 6FP4 E1T 2.42915
69 5OC1 FAD 2.42915
70 5KOX RFP 2.42915
71 5KOX FAD 2.42915
72 1N2X SAM 2.42915
73 4IA6 EIC 2.42915
74 1WG8 SAM 2.42915
75 1Q0H NDP 2.42915
76 1Q0H FOM 2.42915
77 2DPM SAM 2.42915
78 2Q7V FAD 2.42915
79 3GXO SAH 2.42915
80 4USR FAD 2.42915
81 2JB2 FAD 2.42915
82 2JB2 PHE 2.42915
83 3IHG FAD 2.42915
84 1V5F FAD 2.42915
85 1V5F TPP 2.42915
86 5CUQ NSC 2.42915
87 1E5Q NDP 2.42915
88 4BJZ FAD 2.42915
89 4BJZ P3A 2.42915
90 5EEH SAH 2.42915
91 6FP4 FAD 2.42915
92 3A06 NDP 2.42915
93 1YS4 NAP 2.42915
94 3TKA SAM 2.42915
95 3RIY NAD 2.42915
96 2PX8 SAH 2.42915
97 6EQS BV8 2.42915
98 2BKA NDP 2.47934
99 3OZ2 FAD 2.51889
100 2DC1 NAD 2.54237
101 1L3I SAH 2.60417
102 1D4O NAP 2.71739
103 3T7S SAM 2.83401
104 1KYQ NAD 2.83401
105 2PZM NAD 2.83401
106 2PZM UDP 2.83401
107 1KYZ SAH 2.83401
108 4RSL FAD 2.83401
109 1X14 NAD 2.83401
110 3FXU TSU 2.83401
111 1COY FAD 2.83401
112 2ZXI FAD 2.83401
113 3G5S FAD 2.83401
114 3GF4 FAD 2.83401
115 3GF4 UPG 2.83401
116 2DFV NAD 2.83401
117 3ZNN FAD 2.83401
118 3ZNN 4WL 2.83401
119 1COY AND 2.83401
120 5ZYN FAD 2.83401
121 5MW4 5JU 2.83401
122 3WGT FAD 2.83401
123 3WGT QSC 2.83401
124 6GAS FAD 2.83401
125 2WPF FAD 2.83401
126 5EES NAP 2.83401
127 2WPF WPF 2.83401
128 4JDR FAD 2.83401
129 1BZL FAD 2.83401
130 1U8X NAD 2.83401
131 3PFG SAM 2.83401
132 3PFG TLO 2.83401
133 5M90 JIF 2.83401
134 4M37 SAH 2.83401
135 1FEC FAD 2.83401
136 1RYI FAD 2.83401
137 4KGD FAD 2.83401
138 1J5P NAD 2.83401
139 1RYI GOA 2.83401
140 4KGD TDP 2.83401
141 1U3U BNF 2.83401
142 1U3U NAD 2.83401
143 1KOL NAD 2.83401
144 1BZL GCG 2.83401
145 5OJ7 AR6 2.83401
146 1QO8 FAD 2.83401
147 2NVK FAD 2.83401
148 5YU3 NAD 2.83401
149 5YU3 PRO 2.83401
150 1KYZ FER 2.83401
151 6F97 FAD 2.83401
152 2WK1 SAH 2.83401
153 2VTD LKM 2.83401
154 4EIP FAD 2.83401
155 2YVF NAD 2.83401
156 2YVF FAD 2.83401
157 3VC1 GST 2.88462
158 3VC1 SAH 2.88462
159 3JWH SAH 3.22581
160 6EL3 NAP 3.23887
161 4D79 ATP 3.23887
162 4RDH AMP 3.23887
163 5WP5 SAH 3.23887
164 1X87 NAD 3.23887
165 4RDI ATP 3.23887
166 5WP4 SAH 3.23887
167 5MLR NAP 3.23887
168 2EFJ SAH 3.23887
169 6FDF SAH 3.23887
170 5MLR GRQ 3.23887
171 5DF1 58X 3.23887
172 5DF1 NAP 3.23887
173 1P31 EPU 3.23887
174 4LHD GLY 3.23887
175 1LTH NAD 3.23887
176 4OBW SAM 3.23887
177 5J5Z FAD 3.23887
178 5ZI2 ADP 3.23887
179 1B74 DGN 3.23887
180 2PV7 NAD 3.23887
181 5ZI2 NAD 3.23887
182 5JJR SAH 3.23887
183 2Y6Q I7T 3.23887
184 3WLE NAD 3.23887
185 1GET NAP 3.23887
186 1SAY PYR 3.23887
187 1WDK NAD 3.23887
188 1GR0 NAD 3.23887
189 1GPE FAD 3.23887
190 5U8U FAD 3.23887
191 3RNM FAD 3.23887
192 4YKG NAD 3.23887
193 2RGJ FAD 3.23887
194 5HW4 SAM 3.23887
195 2QA1 FAD 3.23887
196 4C3Y FAD 3.23887
197 1GET FAD 3.23887
198 4C3Y ANB 3.23887
199 5U19 SAH 3.23887
200 5U19 827 3.23887
201 2FZW NAD 3.23887
202 1TPY SAH 3.23887
203 2ZWA SAH 3.23887
204 3ELW GP3 3.23887
205 3ELW SAM 3.23887
206 4J56 FAD 3.23887
207 2Y6Q FAD 3.23887
208 4Y30 SAH 3.23887
209 4Y30 49L 3.23887
210 1Z3C SA8 3.23887
211 1RLZ NAD 3.23887
212 1ELI PYC 3.23887
213 1UXG NAD 3.23887
214 1UXG FUM 3.23887
215 3LCV SAM 3.23887
216 2PXX SAH 3.25581
217 3GDH SAH 3.3195
218 3LCC SAH 3.40426
219 1YQD NAP 3.55191
220 5ZW3 SAH 3.55556
221 3HVJ 705 3.61991
222 1EQ2 NAP 3.64372
223 4PIV NDP 3.64372
224 1N7G NDP 3.64372
225 1N7G GDR 3.64372
226 1RJW ETF 3.64372
227 1SQF SAM 3.64372
228 1RM0 D6P 3.64372
229 1RM0 NAI 3.64372
230 4YUW 4JU 3.64372
231 4YUW S4M 3.64372
232 4N49 SAM 3.64372
233 5X62 SAH 3.64372
234 1LVL NAD 3.64372
235 3NJ4 AFX 3.64372
236 3SQP FAD 3.64372
237 3GRU AMP 3.64372
238 5BSZ SAH 3.64372
239 3NJ4 NAD 3.64372
240 3MB5 SAM 3.64372
241 1OC2 TDX 3.64372
242 1OC2 NAD 3.64372
243 3L9W GSH 3.64372
244 3GCZ SAM 3.64372
245 4R6W PC 3.64372
246 3HDY GDU 3.64372
247 3HDY FDA 3.64372
248 3HDY FAD 3.64372
249 3AB1 FAD 3.64372
250 3L9W AMP 3.64372
251 5N0J FAD 3.64372
252 3C6K SPD 3.64372
253 1TUU ADP 3.64372
254 2IID PHE 3.64372
255 2IID FAD 3.64372
256 3C6K MTA 3.64372
257 5FJN FAD 3.64372
258 5FJN BE2 3.64372
259 1HDG NAD 3.64372
260 5UAO FAD 3.64372
261 1C0I BE2 3.64372
262 1C0I FAD 3.64372
263 1HYH NAD 3.64372
264 6F3M NAD 3.64372
265 4D5G FAD 3.64372
266 6F3N NAD 3.64372
267 6F3N ADN 3.64372
268 3HAD NAD 3.64372
269 4D5G TPP 3.64372
270 1REO FAD 3.64372
271 5TUF TDC 3.64372
272 5TUF FAD 3.64372
273 4R6W SAH 3.64372
274 4CNK FAD 3.64372
275 3FPF TNA 3.64372
276 3FPF MTA 3.64372
277 3V1Y NAD 3.64372
278 5TOW ADN 3.64372
279 5TOW NAI 3.64372
280 5AVF TAU 3.64372
281 1LVL FAD 3.64372
282 4HXY NDP 3.65297
283 1QAN SAH 3.68852
284 5A9A UTP 3.7037
285 4UXM BE7 3.78788
286 2PEL LBT 3.81356
287 1XCL SAH 3.82979
288 5XWV NDP 3.83065
289 5XWV 8H6 3.83065
290 3EGI ADP 3.8835
291 1R18 SAH 3.96476
292 2X6T NAP 4.04858
293 2FR1 NDP 4.04858
294 2YY7 NAD 4.04858
295 1V59 NAD 4.04858
296 1A5Z NAD 4.04858
297 1ZQ9 SAM 4.04858
298 2EG5 SAH 4.04858
299 5F8F SFG 4.04858
300 4XQC 13D 4.04858
301 4XQC NAD 4.04858
302 5MPT SAH 4.04858
303 5ERG SAM 4.04858
304 3FUU ADN 4.04858
305 6ECU SAH 4.04858
306 4UCI SAM 4.04858
307 1OBB NAD 4.04858
308 6GKV SAH 4.04858
309 5M67 ADE 4.04858
310 5M67 3D1 4.04858
311 5M67 NAD 4.04858
312 5HSA FAS 4.04858
313 1LLU NAD 4.04858
314 5KMS FAD 4.04858
315 4M52 FAD 4.04858
316 1V59 FAD 4.04858
317 1E1M FAD 4.04858
318 1E1M NAP 4.04858
319 1E6E FAD 4.04858
320 1EZ4 NAD 4.04858
321 4GKV NAD 4.04858
322 6ECW SAH 4.04858
323 5DN9 NAD 4.04858
324 1VJT NAD 4.04858
325 2ZIF SAM 4.04858
326 1L1E SAH 4.04858
327 2IXB A2G 4.04858
328 3I53 SAH 4.04858
329 2IXB NAD 4.04858
330 5BRT FAD 4.04858
331 5BRT CH9 4.04858
332 5G3U FDA 4.04858
333 1D1T NAD 4.04858
334 4OHU NAD 4.04858
335 4OHU 2TK 4.04858
336 4EDF UPG 4.04858
337 3NTD FAD 4.04858
338 4XZ3 COA 4.04858
339 1NYT NAP 4.04858
340 2WA2 SAM 4.04858
341 5KMS NAD 4.04858
342 1NVM NAD 4.04858
343 3BAZ NAP 4.04858
344 5N6C NAD 4.04858
345 4M52 M52 4.04858
346 2A8X FAD 4.04858
347 3NTA FAD 4.04858
348 5G3U ITW 4.04858
349 6AIN FAD 4.06699
350 1IM8 SAI 4.09836
351 2ZFU SAH 4.18605
352 3CBG SAH 4.31034
353 5ZZ6 ADP 4.32692
354 5ZZ6 NAD 4.32692
355 1I1N SAH 4.42478
356 2Q46 NAP 4.45344
357 5MSO NAP 4.45344
358 3A4V PYR 4.45344
359 3A4V NAD 4.45344
360 1FP1 SAH 4.45344
361 5ME4 HP4 4.45344
362 5X68 FAD 4.45344
363 4J36 FAD 4.45344
364 4J36 1HR 4.45344
365 2DKH 3HB 4.45344
366 5MIT NAP 4.45344
367 5MIT FAD 4.45344
368 2HYV UAP SGN IDS SGN IDS 4.45344
369 1G60 SAM 4.45344
370 5BUK FAD 4.45344
371 1SC6 NAD 4.45344
372 1E3I CXF 4.45344
373 5Z21 NAI 4.45344
374 2E5V FAD 4.45344
375 4PIO SAH 4.45344
376 4USQ FAD 4.45344
377 4D04 FAD 4.45344
378 4D04 NAP 4.45344
379 2DKH FAD 4.45344
380 4L8V NAP 4.45344
381 1H9A NAP 4.45344
382 4PIO AVI 4.45344
383 4REP FAD 4.45344
384 3QV1 NAD 4.45344
385 1J49 NAD 4.45344
386 1I9G SAM 4.45344
387 2O4C NAD 4.45344
388 5ZFI 9C9 4.46429
389 1P1C SAH 4.52261
390 3WV8 ATP 4.58716
391 2YVJ NAI 4.58716
392 5LW0 AR6 4.7619
393 4CS9 AMP 4.7619
394 4J1Q NDP 4.8583
395 4EUE NAI 4.8583
396 5HJM MTA 4.8583
397 3QOX SAH 4.8583
398 1F3L SAH 4.8583
399 5BVA FAD 4.8583
400 4X60 SFG 4.8583
401 4X60 3XV 4.8583
402 2P41 SAH 4.8583
403 3EVG SAH 4.8583
404 5DM1 5D7 4.8583
405 5DM1 SAH 4.8583
406 2C7G FAD 4.8583
407 5O4J 9KH 4.8583
408 5O4J PJL 4.8583
409 5DLY SAH 4.8583
410 5DLY 5D7 4.8583
411 4DSG FAD 4.8583
412 4DSG UDP 4.8583
413 6AA8 NAD 4.8583
414 5O4J SAH 4.8583
415 2Q28 ADP 4.8583
416 1KPG SAH 4.8583
417 2C7G ODP 4.8583
418 4HA6 FAD 4.8583
419 2HQM FAD 4.8583
420 4AP3 NAP 4.8583
421 4AP3 FAD 4.8583
422 5NA1 FAD 4.8583
423 1KPH SAH 4.8583
424 5XLX SAH 4.8583
425 5WGR FAD 4.8583
426 3AYI HCI 4.8583
427 3AYI FAD 4.8583
428 1M2K APR 4.8583
429 1T9D FAD 4.8583
430 5WKC FAD 4.8583
431 5E1M PRO PRO LYS ARG ILE ALA 4.97925
432 5E1M SAH 4.97925
433 5N53 8NB 5.12821
434 1Z45 NAD 5.26316
435 1E7S NAP 5.26316
436 5IN4 6CK 5.26316
437 3H8V ATP 5.26316
438 5IN4 GDP 5.26316
439 5IN4 NAP 5.26316
440 5NUF NAD 5.26316
441 5NUE NAD 5.26316
442 3O9Z AKG 5.26316
443 5KVA SAM 5.26316
444 3O9Z NAD 5.26316
445 1I2B NAD 5.26316
446 1I2B UPG 5.26316
447 1I2B USQ 5.26316
448 1U2Z SAH 5.26316
449 4OOE FOM 5.26316
450 4YNU LGC 5.26316
451 4YNU FAD 5.26316
452 1EBF NAD 5.26316
453 4OOE NDP 5.26316
454 1PN0 IPH 5.26316
455 1PN0 FAD 5.26316
456 3BGD SAH 5.26316
457 4EMI NAD 5.26316
458 3UCL NAP 5.26316
459 3UCL CYH 5.26316
460 3UCL FAD 5.26316
461 4EMI FAD 5.26316
462 3BGD PM6 5.26316
463 4JK3 NAD 5.26316
464 4J4H 1J1 5.26316
465 4J4H NAI 5.26316
466 2B4R NAD 5.26316
467 2B4R AES 5.26316
468 2HNK SAH 5.43933
469 3GQK ATP 5.52147
470 2HMT NAI 5.55556
471 3Q87 SAM 5.6
472 2DTJ THR 5.61798
473 5Y1G NAD 5.66802
474 5Y1G AKB 5.66802
475 4NEC SAH 5.66802
476 4KRI SAH 5.66802
477 3ABI NAD 5.66802
478 4AZW SAM 5.66802
479 2PT9 S4M 5.66802
480 4OPC PGT 5.66802
481 4OPC FDA 5.66802
482 2I7C AAT 5.66802
483 3OND ADN 5.66802
484 3OND NAD 5.66802
485 2PT9 2MH 5.66802
486 4MOP 2H5 5.66802
487 4DCM SAM 5.66802
488 5THY SAH 5.66802
489 2XVE FAD 5.66802
490 1D4D FAD 5.66802
491 2XVF FAD 5.66802
492 1Q1R FAD 5.66802
493 5THZ SAH 5.66802
494 1I36 NAP 5.66802
495 5W7R SAH 5.66802
496 1O0S NAI 5.66802
497 2YG3 FAD 5.66802
498 2AQJ FAD 5.76208
499 2AQJ TRP 5.76208
500 5OOH 9ZZ 5.82524
501 5OOH NAP 5.82524
502 3C3Y SAH 5.90717
503 4XUC SAM 5.9633
504 4XUC 43G 5.9633
505 1KEW NAD 6.07287
506 1BXK NAD 6.07287
507 4ZRN NAD 6.07287
508 1KEW TYD 6.07287
509 1GV0 NAD 6.07287
510 5LOG SAH 6.07287
511 4ZRN UPG 6.07287
512 2CDU ADP 6.07287
513 2F1K NAP 6.07287
514 1XTP SAI 6.07287
515 2CDU FAD 6.07287
516 6ECT SAM 6.07287
517 3LZW NAP 6.07287
518 3LZW FAD 6.07287
519 6C5B SAH 6.07287
520 1I8T FAD 6.07287
521 2IZ1 ATR 6.07287
522 3L4S NAD 6.07287
523 3L4S 3PG 6.07287
524 2R4J FAD 6.07287
525 2R4J 13P 6.07287
526 2AOT SAH 6.07287
527 5TS5 FAD 6.07287
528 3BXO SAM 6.27615
529 3MQ2 SAH 6.42202
530 6BWL NAD 6.47773
531 3KO8 NAD 6.47773
532 2JJQ SAH 6.47773
533 5GM1 SAH 6.47773
534 5YF1 SFG 6.47773
535 1ZK7 FAD 6.47773
536 1X7D ORN 6.47773
537 2EXX NAP 6.47773
538 5JGL SAM 6.47773
539 2VVM FAD 6.47773
540 2O07 MTA 6.47773
541 1Q9I TEO 6.47773
542 1Q9I FAD 6.47773
543 1X7D NAD 6.47773
544 2VVL FAD 6.47773
545 3QVP FAD 6.47773
546 2O07 SPD 6.47773
547 3FPZ AHZ 6.47773
548 4YSX FAD 6.47773
549 1T3D CYS 6.47773
550 4POO SAM 6.5
551 2VDV SAM 6.50407
552 2VT3 ATP 6.51163
553 3KP6 SAL 6.62252
554 1JG3 ADN 6.80851
555 1EK6 NAI 6.88259
556 1ORR NAD 6.88259
557 1EK6 UPG 6.88259
558 5DNK SAH 6.88259
559 3VSE SAH 6.88259
560 5BJX NAD 6.88259
561 5BJX UDP 6.88259
562 1Y8Q ATP 6.88259
563 3VPH OXM 6.88259
564 3VPH NAD 6.88259
565 2RGO FAD 6.88259
566 1JQ3 AAT 6.88259
567 3LKZ SFG 6.88259
568 3VYW SAM 6.88259
569 1NAA ABL 6.88259
570 1NAA 6FA 6.88259
571 3NYC FAD 6.88259
572 3NYC IAR 6.88259
573 1MV8 NAD 6.88259
574 4JNA FAD 6.88259
575 2GZ3 NAP 6.88259
576 1RSG FAD 6.88259
577 1MUU NAD 6.88259
578 1YY5 FAD 6.88259
579 1VQW FAD 6.88259
580 2GV8 FAD 6.88259
581 2GVC FAD 6.88259
582 2BZG SAH 6.89655
583 3RGG AIR 6.91824
584 4YMH SAH 7.08333
585 4QTU SAM 7.21154
586 1RKX NAD 7.28745
587 4PVD NDP 7.28745
588 2CVQ NDP 7.28745
589 1BW9 NAD 7.28745
590 4ONQ SFG 7.28745
591 1BXG NAD 7.28745
592 5E72 SAM 7.28745
593 1C1X NAD 7.28745
594 3KLJ FAD 7.28745
595 1LDM NAD 7.28745
596 1UWK URO 7.28745
597 1UWK NAD 7.28745
598 1CDO NAD 7.28745
599 3ZG6 APR 7.28745
600 3OFK SAH 7.40741
601 4UTW RFW 7.42358
602 5UFN SAH 7.56302
603 6DNT NAD 7.69231
604 4KIB SAH 7.69231
605 1T26 GBD 7.69231
606 1T26 NAI 7.69231
607 6BQ6 TER 7.69231
608 3GGO NAI 7.69231
609 3GGO ENO 7.69231
610 1U1I NAD 7.69231
611 2A92 NAI 7.69231
612 2G5C NAD 7.69231
613 1CER NAD 7.69231
614 4M73 M72 7.69231
615 4M73 SAH 7.69231
616 3AD8 NAD 7.69231
617 3AD8 PYC 7.69231
618 3AD8 FAD 7.69231
619 1MO9 FAD 7.69231
620 1MO9 KPC 7.69231
621 1R37 NAD 7.78098
622 2F5Z FAD 7.8125
623 2YX1 SFG 8.09717
624 3GU3 SAH 8.09717
625 3X0D SAH 8.09717
626 2ZJ1 ARJ 8.09717
627 2ZJ1 NAD 8.09717
628 4MIG G3F 8.09717
629 5EB4 FAD 8.09717
630 2FK8 SAM 8.09717
631 3EW2 BTN 8.14815
632 3H2B SAH 8.37438
633 2AK3 AMP 8.40708
634 5BW4 SAM 8.50202
635 3GFB NAD 8.50202
636 4RPL 3UC 8.50202
637 4RPL FAD 8.50202
638 6D6Y SAH 8.50202
639 3TLJ SAH 8.50202
640 5LD5 NAD 8.50202
641 3OJO NAD 8.50202
642 5FWA J7C 8.50202
643 3EYA FAD 8.50202
644 4BUZ OAD 8.53659
645 5L95 AMP 8.75
646 1F8G NAD 8.90688
647 5W7M SAH 8.90688
648 6C8R SAH 8.90688
649 3PT9 SAH 8.90688
650 1UDB UFG 8.90688
651 1UDB NAD 8.90688
652 5KOK SAH 8.90688
653 1UP7 NAD 8.90688
654 5D4V SAH 8.90688
655 1O6Z NAD 8.90688
656 1F8F NAD 8.90688
657 6C8R EQV 8.90688
658 5T9E NAP 8.90688
659 5T9F TYR 8.90688
660 5T9F NAP 8.90688
661 1SZD APR 8.90688
662 4FZV SAM 9.20502
663 3G89 SAM 9.31174
664 5FUB SAH 9.31174
665 1VKO NAD 9.31174
666 5O9F NAD 9.31174
667 5O9F 9ON 9.31174
668 4MO2 FDA 9.31174
669 4D3F NAP 9.31174
670 4MO2 FAD 9.31174
671 3S5W FAD 9.31174
672 4IF4 BEF 9.61539
673 1Y1P NMN AMP PO4 9.7166
674 2OOR NAD 9.7166
675 4ZVV NAD 9.7166
676 4ZVV GN0 9.7166
677 3A4T SFG 9.7166
678 9LDT NAD 9.7166
679 9LDB NAD 9.7166
680 4U8P FDA 9.7166
681 4U8P UDP 9.7166
682 1L7E NAI 9.7166
683 5K7U SAM 9.7166
684 1H82 GZZ 9.7166
685 5JE8 NAD 9.7166
686 5IL1 SAM 9.7166
687 1H82 FAD 9.7166
688 1RJD SAM 9.7166
689 5Z20 NAI 9.7166
690 5UAV TFB 9.7166
691 1NM5 NAP 9.7166
692 1NM5 NAD 9.7166
693 1DJN ADP 9.7166
694 2DBZ NAP 9.7166
695 5UAV NDP 9.7166
696 2XYQ SAH 9.83607
697 1O94 ADP 9.84848
698 3K1X DBX 10
699 5YEC ATP 10.084
700 5MDH NAD 10.1215
701 1G55 SAH 10.1215
702 1SB8 NAD 10.1215
703 4MDH NAD 10.1215
704 1SB8 UD2 10.1215
705 3I6I NDP 10.1215
706 1GTE FAD 10.1215
707 1LDN NAD 10.1215
708 5MZI FYK 10.1215
709 5MZI FAD 10.1215
710 3KB6 NAD 10.1215
711 1V8B NAD 10.1215
712 6BII NAP 10.1215
713 5Y77 FAD 10.1215
714 5MGZ SAH 10.1695
715 4TQG NDP 10.5263
716 2NPX FAD 10.5263
717 2NPX NAD 10.5263
718 1YKJ PHB 10.5263
719 1YKJ FAD 10.5263
720 1UKG MMA 10.5263
721 3P2E SAH 10.6667
722 3SSO SAH 10.9312
723 5A1T NAI 10.9312
724 4KRG SAH 10.9312
725 5A1T OXM 10.9312
726 3GDN FAD 10.9312
727 3GDN HBX 10.9312
728 4TXI FAD 10.9312
729 4RQU NAD 10.9312
730 2BRY FAD 10.9312
731 6DUB SAH 11.2613
732 4GLL NAD 11.336
733 5XNC MTA 11.336
734 5JWC FAD 11.336
735 2EJU SAH 11.336
736 1NJR XYL 11.336
737 5ZI7 GLU 11.336
738 1VM6 NAD 11.4035
739 1LSS NAD 11.4286
740 2XVM SAH 11.5578
741 3RFV NAI 11.7409
742 3RFV 15L 11.7409
743 1PL6 NAD 11.7409
744 2VHW NAI 11.7409
745 1PL6 572 11.7409
746 3LAD FAD 11.7409
747 5JE0 SAH 11.7409
748 5JE0 AZ8 11.7409
749 6F5Z SAH 12.1212
750 1Z6Z NAP 12.1457
751 2Q1W NAD 12.1457
752 4J7U NAP 12.1457
753 4J7U YTZ 12.1457
754 1NVT NAP 12.1457
755 3LU1 NAD 12.5506
756 2UYQ SAM 12.5506
757 4DMG SAM 12.5506
758 3DMH SAM 12.5506
759 3DMH GMP 12.5506
760 1ZOS MTM 12.6087
761 4U7W NDP 12.9555
762 1GY8 NAD 12.9555
763 1V6A TRE 12.9555
764 1RPN NDP 12.9555
765 3TKY SAH 12.9555
766 2JHP SAH 12.9555
767 4EMJ FAD 13.0841
768 2C29 DQH 13.3603
769 2C29 NAP 13.3603
770 2JHF NAD 13.3603
771 5E9W SAH 13.7652
772 5E8J SAH 13.7652
773 3P13 RIP 13.8889
774 4II2 ATP 14.17
775 5FTW SAH 14.17
776 4D42 NAP 14.17
777 4D42 W0I 14.17
778 2DKN NAI 14.5749
779 3ORF NAD 14.5749
780 6GAR FAD 14.5749
781 5N5D SAM 14.6018
782 4C4A SAH 15.3846
783 3O26 NDP 16.1943
784 2HK9 ATR 16.1943
785 1OMO NAD 16.1943
786 2HK9 NAP 16.1943
787 6A0S NDP 16.2651
788 6A0S HSE 16.2651
789 3DUW SAH 16.5919
790 5L4S 6KX 16.5992
791 5L4S NAP 16.5992
792 1PJS NAD 16.5992
793 4A6D SAM 16.5992
794 3U31 NAD 16.5992
795 1WY7 SAH 16.9082
796 5M58 SAH 16.9565
797 1VE3 SAM 17.1806
798 1FK8 NAD 17.4089
799 3DXY SAM 17.4312
800 3OIG NAD 17.6692
801 4KOA NDP 17.8138
802 2YRX AMP 17.8138
803 1JNR FAD 18
804 1WP4 NDP 18.6235
805 1A27 NAP 19.0283
806 3HB5 NAP 19.0283
807 5AOV NAP 19.0283
808 1FP2 SAH 19.4332
809 1P77 ATR 19.4332
810 5JCM FAD 19.4332
811 5JCM NAD 19.4332
812 5JCM ISD 19.4332
813 1S7G APR 19.4332
814 1S7G NAD 19.4332
815 5ZEC NAP 19.8381
816 4KXQ APR 20
817 4O1M NAD 20.2429
818 1OAA OAA 20.2429
819 5W7K SAH 20.6478
820 3OJF NDP 21.4575
821 3OJF IMJ 21.4575
822 5L53 NAP 21.8623
823 1V35 NAI 22.2672
824 2Q1S NAI 23.8866
825 1EJ0 SAM 24.4444
826 5CG1 NAD BBN 25.1012
827 1QG6 TCL 25.1012
828 1QG6 NAD 25.1012
829 2E0N SAH 25.4826
830 2WYV NAD 25.5061
831 1XSE NDP 26.3158
832 4K26 NDP 26.3158
833 4K26 SFF 26.3158
834 3CH6 311 26.3158
835 3CH6 NAP 26.3158
836 5FA8 SAM 26.7081
837 4Q9N NAI 27.1255
838 4GQB 0XU 27.2727
839 4M38 SAH 28.5714
840 1D7O TCL 29.5547
841 1D7O NAD 29.5547
842 4G5H NAP 29.5547
843 4G5H UD7 29.5547
844 5FA5 MTA 30
845 6H0B UDP 31.25
846 1R6D NAD 31.5789
847 1R6D DAU 31.5789
848 1NNU NAD 31.6667
849 1NNU TCT 31.6667
850 3RJ5 NAD 31.9838
851 1YQZ FAD 32.7935
852 3WXB NDP 33.1984
853 2GDZ NAD 33.6032
854 2PD4 DCN 33.8182
855 2PD4 NAD 33.8182
856 5I7S NAD 34.0081
857 5I7S E9P 34.0081
858 1N5D NDP 34.8178
859 1W8D NAP 35.4305
860 1W73 NAP 35.4305
861 2BD0 NAP 35.6557
862 2BD0 BIO 35.6557
863 1W6U NAP 36.4238
864 2GN4 UD1 36.4372
865 2GN4 NDP 36.4372
866 4AT0 FAD 36.4372
867 1WMA AB3 36.8421
868 1WMA NDP 36.8421
869 1HDR NAD 37.7049
870 3RKR NAP 38.4615
871 2ZAT NAP 39.2713
872 1H5Q NAP 39.6761
873 3AFN NAP 39.6761
874 5Z2L NDP 40.4082
875 3ZV6 4HB 40.4858
876 3ZV6 NAD 40.4858
877 1GZ6 NAI 40.8907
878 3H4V DVP 40.8907
879 3H4V NAP 40.8907
880 3V1U NAD 41.2955
881 2Q2V NAD 41.2955
882 4CLO NAP 41.2955
883 3JQ8 NAP 41.2955
884 3JQ7 NAP 41.2955
885 3BMN NAP 41.2955
886 4CM9 NAP 41.2955
887 3JQA NAP 41.2955
888 4CME NAP 41.2955
889 3JQ9 NAP 41.2955
890 4CLR NAP 41.2955
891 2WD7 NAP 41.2955
892 4CM4 NAP 41.2955
893 4CMI NAP 41.2955
894 3JQF NAP 41.2955
895 3BMO NAP 41.2955
896 4CM8 NAP 41.2955
897 3JQG NAP 41.2955
898 3JQB NAP 41.2955
899 3BMQ NAP 41.2955
900 2VZ0 D64 41.2955
901 2VZ0 NAP 41.2955
902 3AI3 SOL 41.2955
903 4CME KTZ 41.2955
904 1NFQ NAI 42.1053
905 3ICC NAP 42.1053
906 1ZBQ NAD 42.1053
907 5OVL NAP 42.5101
908 4URF NAD 42.5101
909 5OVK NDP 42.5101
910 6F9Q NAD 42.915
911 1ZK4 NAP 42.915
912 2AE2 NAP 42.915
913 1ZK4 AC0 42.915
914 2AE2 PTO 42.915
915 3D3W NAP 43.0328
916 1PR9 NAP 43.0328
917 4FC7 COA 43.3198
918 4FC7 NAP 43.3198
919 5O42 NAD 43.3198
920 5O42 BGC 43.3198
921 5O42 9JW 43.3198
922 3QWI NAP 43.7247
923 3QWI CUE 43.7247
924 2B4Q NAP 44.1296
925 2WSB NAD 44.1296
926 1HDC CBO 44.1296
927 1E6W NAD 44.5344
928 1AE1 NAP 44.5344
929 1YXM ADE 44.5344
930 2RH4 EMO 44.5344
931 1GEG NAD 44.9393
932 5EJ2 NAD 44.9393
933 3NUG NAD 45.3441
934 1E3W NAD 45.3441
935 6CI9 NAP 45.3441
936 1ZEM NAD 45.749
937 1U7T NAD 45.749
938 1GEE NAD 45.749
939 1X1T NAD 45.749
940 3O03 NAP 45.749
941 1UZN NAP 45.749
942 1U7T TDT 45.749
943 4CQM NAP 46.5587
944 3OID NDP 46.5587
945 3AY6 NAI 46.5587
946 3AY6 BGC 46.5587
947 1G0N PHH 46.5587
948 1G0N NDP 46.5587
949 3SJ7 NDP 46.9636
950 3VZS NAP 46.9636
951 3VZS CAA 46.9636
952 5B4T 3HR 47.3684
953 5B4T NAD 47.3684
954 1O5I NAD 47.3896
955 5OJI NAP 47.7733
956 5OJI ISN 47.7733
957 1Q7B NAP 47.9508
958 4ZA2 NAD 48.1781
959 1VL8 NAP 48.583
960 2CFC NAD 48.9879
961 1XHL NDP 48.9879
962 4NBT NAD 49.5833
963 4QED NAP 49.7976
964 2DTX BMA 49.7976
Pocket No.: 2; Query (leader) PDB : 3GEG; Ligand: NAD; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3geg.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 3GEG; Ligand: NAD; Similar sites found with APoc: 42
This union binding pocket(no: 3) in the query (biounit: 3geg.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 3KO0 TFP None
2 3CQO FUC 1.21457
3 5H81 NAP 1.61943
4 4Z0H NAD 2.02429
5 1SZ2 BGC 2.42915
6 1K12 FUC