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Receptor
PDB id Resolution Class Description Source Keywords
3KO8 1.8 Å EC: 5.1.3.2 CRYSTAL STRUCTURE OF UDP-GALACTOSE 4-EPIMERASE PYROBACULUM CALIDIFONTIS ISOMERASE UDP-GALACTOSE 4-EPIMERASE
Ref.: CRYSTAL STRUCTURE OF UDP-GALACTOSE 4-EPIMERASE FROM HYPERTHERMOPHILIC ARCHAEON PYROBACULUM CALIDIFONTIS ARCH.BIOCHEM.BIOPHYS. V. 512 126 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAD A:901;
Valid;
none;
submit data
663.425 C21 H27 N7 O14 P2 c1cc(...
PO4 A:1001;
Invalid;
none;
submit data
94.971 O4 P [O-]P...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3KO8 1.8 Å EC: 5.1.3.2 CRYSTAL STRUCTURE OF UDP-GALACTOSE 4-EPIMERASE PYROBACULUM CALIDIFONTIS ISOMERASE UDP-GALACTOSE 4-EPIMERASE
Ref.: CRYSTAL STRUCTURE OF UDP-GALACTOSE 4-EPIMERASE FROM HYPERTHERMOPHILIC ARCHAEON PYROBACULUM CALIDIFONTIS ARCH.BIOCHEM.BIOPHYS. V. 512 126 2011
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 6 families.
1 3KO8 - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 6 families.
1 3KO8 - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3KO8 - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAD; Similar ligands found: 230
No: Ligand ECFP6 Tc MDL keys Tc
1 A3D 0.872727 0.986111
2 NHD 0.821429 0.972222
3 NAP 0.811966 0.986111
4 NFD 0.791304 0.946667
5 NXX 0.765766 0.972603
6 DND 0.765766 0.972603
7 AMP NAD 0.74359 0.972222
8 ZID 0.737705 0.986111
9 NAQ 0.729508 0.934211
10 NAE 0.721311 0.959459
11 NA0 0.712 0.972603
12 TAP 0.704 0.921053
13 NDE 0.689922 0.972603
14 NAJ 0.683333 0.972222
15 NDC 0.679389 0.934211
16 NDO 0.674603 0.958904
17 N01 0.656 0.972222
18 CNA 0.642276 0.972603
19 NBP 0.621212 0.922078
20 8ID 0.609756 0.922078
21 A2D 0.576923 0.958333
22 ADP 0.575472 0.931507
23 NGD 0.574803 0.922078
24 BA3 0.566038 0.958333
25 M33 0.564815 0.918919
26 ADP PO3 0.563636 0.957747
27 B4P 0.560748 0.958333
28 AP5 0.560748 0.958333
29 AN2 0.555556 0.918919
30 AT4 0.555556 0.894737
31 GAP 0.553571 0.932432
32 OOB 0.551724 0.972222
33 CA0 0.550459 0.932432
34 9JJ 0.546053 0.898734
35 HEJ 0.545455 0.931507
36 ACP 0.545455 0.906667
37 ATP 0.545455 0.931507
38 DQV 0.544 0.972222
39 ADP ALF 0.54386 0.883117
40 ALF ADP 0.54386 0.883117
41 DAL AMP 0.543103 0.945205
42 APR 0.540541 0.931507
43 AQP 0.540541 0.931507
44 AR6 0.540541 0.931507
45 5FA 0.540541 0.931507
46 ADP VO4 0.53913 0.945205
47 VO4 ADP 0.53913 0.945205
48 AD9 0.535714 0.906667
49 SAP 0.535714 0.883117
50 AGS 0.535714 0.883117
51 WAQ 0.533333 0.896104
52 ABM 0.53271 0.905405
53 DLL 0.529412 0.972222
54 00A 0.529412 0.921053
55 ACQ 0.526316 0.906667
56 NJP 0.526316 0.959459
57 ANP 0.526316 0.906667
58 OAD 0.525 0.932432
59 ADX 0.522523 0.839506
60 5AL 0.521739 0.945205
61 A1R 0.521008 0.871795
62 9SN 0.520325 0.909091
63 A 0.518868 0.930556
64 AMP 0.518868 0.930556
65 50T 0.517857 0.893333
66 ATF 0.517241 0.894737
67 1ZZ 0.516393 0.851852
68 3OD 0.516393 0.932432
69 SON 0.513514 0.92
70 PRX 0.513274 0.881579
71 6YZ 0.512821 0.906667
72 SRP 0.512821 0.92
73 9X8 0.512397 0.883117
74 ADP BMA 0.512397 0.932432
75 3UK 0.512397 0.958904
76 MYR AMP 0.512195 0.851852
77 NAJ PZO 0.510949 0.909091
78 NMN 0.509434 0.875
79 A3R 0.508333 0.871795
80 B5V 0.508197 0.945946
81 AMP DBH 0.507937 0.906667
82 A22 0.504202 0.945205
83 ATP A A A 0.504 0.971831
84 B5M 0.504 0.933333
85 FA5 0.504 0.945946
86 8QN 0.5 0.945205
87 NAX 0.496183 0.886076
88 TYR AMP 0.496063 0.933333
89 PR8 0.495935 0.8625
90 AMO 0.495868 0.92
91 ADQ 0.495868 0.932432
92 4AD 0.495868 0.933333
93 PAJ 0.495868 0.873418
94 A12 0.495495 0.894737
95 AP2 0.495495 0.894737
96 AHZ 0.492308 0.851852
97 YAP 0.492063 0.933333
98 FYA 0.491935 0.918919
99 AHX 0.491803 0.884615
100 4UU 0.488372 0.933333
101 5SV 0.487603 0.8375
102 TAT 0.487179 0.894737
103 T99 0.487179 0.894737
104 APC 0.486957 0.894737
105 SRA 0.486239 0.881579
106 6V0 0.484848 0.909091
107 NAI 0.484848 0.921053
108 GTA 0.484615 0.898734
109 A A 0.483871 0.958333
110 LAD 0.483871 0.873418
111 AU1 0.482456 0.906667
112 F2R 0.481752 0.831325
113 OMR 0.481203 0.841463
114 TXE 0.481203 0.921053
115 AF3 ADP 3PG 0.481203 0.873418
116 LAQ 0.480916 0.851852
117 G3A 0.48062 0.909091
118 B5Y 0.480315 0.933333
119 NB8 0.48 0.884615
120 TXA 0.48 0.92
121 BIS 0.48 0.871795
122 ME8 0.48 0.851852
123 PTJ 0.48 0.884615
124 139 0.477941 0.886076
125 LPA AMP 0.477273 0.851852
126 AFH 0.476923 0.873418
127 AR6 AR6 0.476923 0.958333
128 G5P 0.476923 0.909091
129 ARG AMP 0.476923 0.841463
130 25L 0.47619 0.945205
131 NAJ PYZ 0.475524 0.864198
132 25A 0.47541 0.958333
133 9ZA 0.47541 0.896104
134 9ZD 0.47541 0.896104
135 DZD 0.47482 0.897436
136 TXD 0.473684 0.921053
137 4UV 0.472868 0.933333
138 TYM 0.470149 0.945946
139 RBY 0.470085 0.894737
140 ADV 0.470085 0.894737
141 4TA 0.467626 0.864198
142 48N 0.466165 0.884615
143 XAH 0.465116 0.851852
144 4UW 0.462687 0.897436
145 M24 0.461538 0.886076
146 80F 0.460993 0.853659
147 IOT 0.459854 0.821429
148 T5A 0.456522 0.853659
149 EAD 0.455782 0.886076
150 MAP 0.455285 0.883117
151 GA7 0.454545 0.894737
152 BT5 0.453901 0.821429
153 A4P 0.452555 0.833333
154 UP5 0.451852 0.933333
155 PAP 0.445378 0.917808
156 4TC 0.445255 0.909091
157 AP0 0.445255 0.884615
158 YLP 0.444444 0.831325
159 P1H 0.443709 0.864198
160 AOC 0.442478 0.810811
161 Z5A 0.439189 0.833333
162 LMS 0.4375 0.817073
163 2A5 0.436975 0.857143
164 A G 0.43662 0.921053
165 G A A A 0.43662 0.909091
166 COD 0.43662 0.802326
167 ADJ 0.435714 0.841463
168 YLB 0.434783 0.831325
169 YLC 0.434783 0.851852
170 U A G G 0.433566 0.921053
171 ATR 0.433333 0.90411
172 7MD 0.432836 0.851852
173 8X1 0.432 0.764045
174 G5A 0.429752 0.790698
175 PO4 PO4 A A A A PO4 0.429688 0.943662
176 TAD 0.42963 0.873418
177 5AS 0.42735 0.770115
178 BTX 0.426573 0.831325
179 YLA 0.425532 0.831325
180 DSZ 0.425197 0.790698
181 NCN 0.424779 0.805556
182 UPA 0.42446 0.921053
183 8PZ 0.424242 0.811765
184 VMS 0.424 0.8
185 54H 0.424 0.8
186 9K8 0.423077 0.744444
187 N0B 0.422819 0.853659
188 6AD 0.422764 0.85
189 AYB 0.422535 0.821429
190 7D3 0.422414 0.844156
191 YLY 0.421769 0.821429
192 TSB 0.420635 0.809524
193 ODP 0.41958 0.922078
194 AV2 0.419355 0.855263
195 FB0 0.419355 0.775281
196 A5A 0.419355 0.819277
197 NNR 0.419048 0.739726
198 A A A 0.418605 0.918919
199 U A 0.417808 0.946667
200 649 0.417266 0.775281
201 NMN AMP PO4 0.416667 0.933333
202 SSA 0.416 0.790698
203 P5A 0.415385 0.755556
204 LSS 0.414062 0.772727
205 A2R 0.412698 0.918919
206 52H 0.412698 0.790698
207 JB6 0.412214 0.896104
208 5N5 0.411215 0.783784
209 YSA 0.410448 0.811765
210 53H 0.409449 0.790698
211 5CA 0.409449 0.790698
212 ITT 0.408333 0.878378
213 7D4 0.408333 0.844156
214 NA7 0.407692 0.894737
215 LEU LMS 0.407692 0.784091
216 5CD 0.407407 0.794521
217 0WD 0.406897 0.909091
218 A3P 0.40678 0.930556
219 HFD 0.406504 0.883117
220 AVV 0.40625 0.860759
221 RAB 0.40566 0.808219
222 XYA 0.40566 0.808219
223 ADN 0.40566 0.808219
224 FDA 0.405063 0.823529
225 GSU 0.40458 0.790698
226 7MC 0.404255 0.831325
227 NSS 0.403101 0.811765
228 6FA 0.402516 0.853659
229 PPS 0.4 0.817073
230 NVA LMS 0.4 0.784091
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3KO8; Ligand: NAD; Similar sites found with APoc: 882
This union binding pocket(no: 1) in the query (biounit: 3ko8.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 4YEE 4CQ None
2 2BOS GLA GAL GLC NBU None
3 2BOS GLA GAL GLC None
4 5C2N NAG None
5 1SNY NAP 0.749064
6 5L53 NAP 1.28205
7 5KKA 6V0 1.28205
8 1U1I NAD 1.28205
9 4XB2 HSE 1.28205
10 4XB2 NDP 1.28205
11 1GZ4 ATP 1.28205
12 4JBI NDP 1.28205
13 5THQ NDP 1.47059
14 3LL9 ADP 1.48699
15 1X1T NAD 1.53846
16 6GKV SAH 1.60256
17 4C4A SAH 1.60256
18 4ZCC FAD 1.60256
19 4ZCC NAI 1.60256
20 1P31 EPU 1.60256
21 3FIU POP 1.60643
22 1ZQ9 SAM 1.75439
23 2RH4 EMO 1.80505
24 2DTX BMA 1.89394
25 6EL3 NAP 1.92308
26 3B20 NAD 1.92308
27 1ZGA SAH 1.92308
28 3OA2 NAD 1.92308
29 3CMC NAD 1.92308
30 5UAO FAD 1.92308
31 6D6Y SAH 1.92308
32 2D2I NAP 1.92308
33 1JG9 GLC 1.92308
34 4JNA FAD 1.92308
35 4LH7 1X8 1.92308
36 3B1J NAD 1.92308
37 1J49 NAD 1.92308
38 4B7X NAP 1.92308
39 5W7M SAH 1.92308
40 2BWN SIN 1.92308
41 5J60 FAD 1.92308
42 1RJD SAM 1.92308
43 3GWZ SAH 1.92308
44 2UYQ SAM 1.93548
45 5EJ2 NAD 1.94805
46 5YSS NAD 1.95312
47 5OVL NAP 2
48 1O5I NAD 2.00803
49 2VDV SAM 2.03252
50 3GU3 SAH 2.11268
51 3SJU NDP 2.15054
52 2B4Q NAP 2.17391
53 1P77 ATR 2.20588
54 5T9F TYR 2.21402
55 5T9F NAP 2.21402
56 5T9E NAP 2.21402
57 1FWV SGA MAG FUC 2.23881
58 5ULP KB1 2.23881
59 5DF1 NAP 2.24359
60 5DF1 58X 2.24359
61 2V6G NAP 2.24359
62 4MDH NAD 2.24359
63 3FSY SCA 2.24359
64 5MDH NAD 2.24359
65 2VVM FAD 2.24359
66 3QJ4 FAD 2.24359
67 1I8T FAD 2.24359
68 5MIT NAP 2.24359
69 5MIT FAD 2.24359
70 2VVL FAD 2.24359
71 5A04 BGC 2.24359
72 5A04 NDP 2.24359
73 2E5V FAD 2.24359
74 3AB4 THR 2.24719
75 2PXX SAH 2.32558
76 5N6C NAD 2.33333
77 5OVK NDP 2.34375
78 5OJL TXP 2.34899
79 3ICC NAP 2.35294
80 4FN4 NAD 2.3622
81 4YCA NDP 2.38095
82 3ORF NAD 2.39044
83 2D2F ADP 2.4
84 2OFW ADX 2.40385
85 4OHU NAD 2.42215
86 4OHU 2TK 2.42215
87 1NE7 AGP 2.42215
88 1RPJ ALL 2.43056
89 2XYQ SAH 2.45902
90 2FR1 NDP 2.46914
91 3GCZ SAM 2.48227
92 4FC7 COA 2.52708
93 4FC7 NAP 2.52708
94 1TL2 NDG 2.54237
95 1T26 GBD 2.5641
96 1T26 NAI 2.5641
97 5ZI2 NAD 2.5641
98 4XFR CIT 2.5641
99 5ZI2 ADP 2.5641
100 2IZ1 ATR 2.5641
101 1H9A NAP 2.5641
102 3OJO NAD 2.5641
103 5TWB FAD 2.5641
104 2JK0 ASP 2.5641
105 4UCI SAM 2.5641
106 3SSO SAH 2.5641
107 1GPJ CIT 2.5641
108 5W7K SAH 2.5641
109 6FDF SAH 2.5641
110 1FP2 SAH 2.5641
111 1ZH8 NAP 2.5641
112 3PIJ FRU 2.5641
113 1P0F NAP 2.5641
114 4RQU NAD 2.5641
115 1X7D NAD 2.5641
116 3JU6 ARG 2.5641
117 2XVF FAD 2.5641
118 4E5N NAD 2.5641
119 3EC1 GDP 2.5641
120 4OM8 NAD 2.589
121 2P41 SAH 2.62295
122 2VN9 GVD 2.65781
123 5EPO NAP 2.67176
124 5U5G NAP 2.71186
125 5Y8L HUI 2.71186
126 5Y8L NAD 2.71186
127 1PZG A3D 2.71903
128 3H8V ATP 2.73973
129 3B1F NAD 2.75862
130 2RIF AMP 2.83688
131 2G5C NAD 2.84698
132 4J1Q NDP 2.88462
133 9LDT NAD 2.88462
134 5CAE COA 2.88462
135 9LDB NAD 2.88462
136 3HQ9 OXL 2.88462
137 1CER NAD 2.88462
138 2NU8 COA 2.88462
139 1GPE FAD 2.88462
140 1HKU NAD 2.88462
141 5N0J FAD 2.88462
142 2NAD NAD 2.88462
143 1HYE NAP 2.88462
144 5K0A FAD 2.88462
145 5XHA FRU 2.88462
146 1RM4 NDP 2.88462
147 6HKE LMR 2.88462
148 3OND ADN 2.88462
149 3OND NAD 2.88462
150 5UR0 NAD 2.88462
151 5JY6 NAD 2.88462
152 4ZGS NAD 2.88462
153 5CAE SIN 2.88462
154 5UI2 SUC 2.88462
155 1GV0 NAD 2.90323
156 3EVG SAH 2.90909
157 5OOH 9ZZ 2.91262
158 5OOH NAP 2.91262
159 3A4T SFG 2.91971
160 5XVH NAP 2.94118
161 4LZB URA 2.94118
162 4Y9D NAI 2.95082
163 1O6Z NAD 2.9703
164 5D4V SAH 2.98507
165 5CUQ NSC 2.99625
166 3O7W SAM 3.06122
167 2WYV NAD 3.06513
168 5Z21 NAI 3.07263
169 2CVZ NDP 3.11419
170 1WP4 NDP 3.11419
171 1N5D NDP 3.125
172 5J6Y BGC 3.19149
173 5J6Y GLC 3.19149
174 5BSZ SAH 3.2
175 1SQF SAM 3.20513
176 4ARU TLA 3.20513
177 1WDI CIT 3.20513
178 2A92 NAI 3.20513
179 5H81 NAP 3.20513
180 3L6C MLI 3.20513
181 3GDN FAD 3.20513
182 3GDN HBX 3.20513
183 1OMO NAD 3.20513
184 2I3G NAP 3.20513
185 2GCG NDP 3.20513
186 3GVL SLB SIA 3.20513
187 5WC2 ADP 3.20513
188 2BKA NDP 3.30579
189 1W6U NAP 3.31126
190 1W73 NAP 3.31126
191 1W8D NAP 3.31126
192 1W6U HXC 3.31126
193 2DT5 NAD 3.31754
194 4ITU NAI 3.34572
195 4ITU 1HS 3.34572
196 2CVQ NDP 3.36391
197 2HXW FLC 3.37553
198 3LCC SAH 3.40426
199 4HXY NDP 3.42466
200 1NFQ NAI 3.46154
201 3AFN NAP 3.52564
202 5NUE NAD 3.52564
203 5NUF NAD 3.52564
204 5JAQ NAI 3.52564
205 1UWK URO 3.52564
206 1UWK NAD 3.52564
207 1SC6 NAD 3.52564
208 4DCM SAM 3.52564
209 6GAR FAD 3.52564
210 1B8U NAD 3.52564
211 1B8U OAA 3.52564
212 1G55 SAH 3.52564
213 5HV7 RBL 3.52564
214 4MIG G3F 3.52564
215 6C4N NAP 3.52564
216 4J36 FAD 3.52564
217 1YKJ PHB 3.52564
218 1YKJ FAD 3.52564
219 2F57 23D 3.52564
220 4L8V NAP 3.52564
221 4J36 1HR 3.52564
222 2Q2V NAD 3.52941
223 2WSB NAD 3.54331
224 1GUZ NAD 3.54839
225 4R78 AMP 3.55987
226 3FXU TSU 3.60656
227 1WMA NDP 3.62319
228 1WMA AB3 3.62319
229 5OCG 9R5 3.7037
230 3GDH SAH 3.73444
231 2VOH CIT 3.82166
232 4EUE NAI 3.84615
233 1SOW NAD 3.84615
234 2AQJ FAD 3.84615
235 2AQJ TRP 3.84615
236 1BZL FAD 3.84615
237 1BZL GCG 3.84615
238 5JJR SAH 3.84615
239 3C1O NAP 3.84615
240 2WET FAD 3.84615
241 1YY5 FAD 3.84615
242 5H6S HDH 3.84615
243 1RSG FAD 3.84615
244 3L4S NAD 3.84615
245 2TOH HBI 3.84615
246 5KMS NAD 3.84615
247 6BXL SAM 3.84615
248 1EBF NAD 3.84615
249 3L4S 3PG 3.84615
250 5GSN NAP 3.84615
251 5GSN FAD 3.84615
252 2XVE FAD 3.84615
253 3KB6 NAD 3.84615
254 2PWY SAH 3.87597
255 5FTW SAH 3.90625
256 1VKO NAD 3.91061
257 3U4C NDP 3.91459
258 1I9G SAM 3.92857
259 1KYQ NAD 4.0146
260 1XHL NDP 4.0404
261 2JAH NDP 4.04858
262 1HFE CYS 4.06504
263 3DXY SAM 4.12844
264 1ZBQ NAD 4.16667
265 4XQC 13D 4.16667
266 4XQC NAD 4.16667
267 1F8G NAD 4.16667
268 3Q9T FAY 4.16667
269 1Y8Q ATP 4.16667
270 3WGT FAD 4.16667
271 4OOE FOM 4.16667
272 4OOE NDP 4.16667
273 3WGT QSC 4.16667
274 3ZNN FAD 4.16667
275 3ZNN 4WL 4.16667
276 5E9W SAH 4.16667
277 4GKV NAD 4.16667
278 3GGO NAI 4.16667
279 3GGO ENO 4.16667
280 5E8J SAH 4.16667
281 1C0I FAD 4.16667
282 1C0I BE2 4.16667
283 5Z20 NAI 4.16667
284 5DN9 NAD 4.16667
285 3AXB FAD 4.16667
286 3AXB PRO 4.16667
287 2GSD NAD 4.16667
288 1X14 NAD 4.16667
289 2RAB NAD 4.16667
290 5F8F SFG 4.16667
291 5GJO PLP 4.16667
292 2B4R NAD 4.16667
293 3OFK SAH 4.16667
294 4LYA ATP 4.16667
295 4USQ FAD 4.16667
296 4KCT FDP 4.16667
297 4FZV SAM 4.1841
298 1VJE MSE 4.21687
299 1INN MET 4.21687
300 3C3Y SAH 4.21941
301 3WXB NDP 4.30108
302 5JE8 NAD 4.30464
303 3MB5 SAM 4.31373
304 3G2O SAM 4.34783
305 2P3I MNA 4.34783
306 1D7O TCL 4.3771
307 1D7O NAD 4.3771
308 5EES NAP 4.45344
309 5MSO NAP 4.48718
310 1GZ6 NAI 4.48718
311 2CDU ADP 4.48718
312 4ZVV NAD 4.48718
313 4ZVV GN0 4.48718
314 3BAZ NAP 4.48718
315 5NA1 FAD 4.48718
316 1LTH NAD 4.48718
317 1GAD NAD 4.48718
318 1DSS NAD 4.48718
319 3AB1 FAD 4.48718
320 2VYN NAD 4.48718
321 4NZF ARB 4.48718
322 3V1Y NAD 4.48718
323 5JCA FAD 4.48718
324 5JCA NDP 4.48718
325 1C3V NDP 4.4898
326 5BW4 SAM 4.49438
327 3EB9 FLC 4.51128
328 1P19 IMP 4.52489
329 1LUA NAP 4.52962
330 5X9D 80F 4.60526
331 3JWH SAH 4.60829
332 3OJF IMJ 4.66926
333 3OJF NDP 4.66926
334 5I7S E9P 4.71014
335 5I7S NAD 4.71014
336 1L7N AF3 4.73934
337 1L7N ALF 4.73934
338 2Q46 NAP 4.74308
339 1J5P NAD 4.74308
340 1JA9 NDP 4.74453
341 5ME4 HP4 4.74453
342 1NYT NAP 4.79705
343 3V1U NAD 4.80769
344 3ICT ADP 4.80769
345 3ICS ADP 4.80769
346 4R5M NAP 4.80769
347 5MPT SAH 4.80769
348 4R5M 4NO 4.80769
349 2ZJ1 ARJ 4.80769
350 1GTE FAD 4.80769
351 2ZJ1 NAD 4.80769
352 4RSL FAD 4.80769
353 1VJT NAD 4.80769
354 1UP7 NAD 4.80769
355 6A3J NAI 4.80769
356 5ZYN FAD 4.80769
357 1WQ1 AF3 4.81928
358 5XWV NDP 4.83871
359 5XWV 8H6 4.83871
360 2JAP NDP 4.8583
361 3H4V NAP 4.86111
362 3H4V DVP 4.86111
363 4J7U YTZ 4.86111
364 4J7U NAP 4.86111
365 5YRJ BGC GLC 4.92958
366 1Z6Z NAP 4.96454
367 4K6B GLU 4.96894
368 1OAA OAA 5.01931
369 2XVM SAH 5.02513
370 4K26 NDP 5.07246
371 4K26 SFF 5.07246
372 5WQP NAP 5.12821
373 5WQP NCA 5.12821
374 5XNC MTA 5.12821
375 1WDK NAD 5.12821
376 6CEP NAD 5.12821
377 6A0S HSE 5.12821
378 6A0S NDP 5.12821
379 6CEP OXM 5.12821
380 3X01 AMP 5.12821
381 4MOP 2H5 5.12821
382 2Z49 AMG 5.12821
383 1JNR FAD 5.12821
384 1A99 PUT 5.12821
385 1D4D SIN 5.12821
386 1GQ2 NAP 5.12821
387 3PT9 SAH 5.12821
388 1GR0 NAD 5.12821
389 1TI7 NAP 5.12821
390 1FP1 SAH 5.12821
391 5KOK SAH 5.12821
392 5JCM FAD 5.12821
393 5JCM ISD 5.12821
394 5JCM NAD 5.12821
395 5NMX NAP 5.12821
396 1ZGS XMM 5.12821
397 1O0S NAI 5.12821
398 5X68 FAD 5.12821
399 3L9W AMP 5.12821
400 3HAD NAD 5.19481
401 2CFC NAD 5.2
402 5M58 SAH 5.21739
403 3MBI HSX 5.22648
404 4NEC SAH 5.30303
405 4CQM NAP 5.32787
406 1ZEM NAD 5.34351
407 2PV7 NAD 5.36913
408 4NBW NAD 5.44747
409 5MLR NAP 5.44872
410 5MLR GRQ 5.44872
411 1E5Q NDP 5.44872
412 2YVJ NAI 5.44872
413 3LZW NAP 5.44872
414 3LZW FAD 5.44872
415 1YS4 NAP 5.44872
416 6F97 FAD 5.44872
417 5WP5 SAH 5.44872
418 4YKG NAD 5.44872
419 4Z24 FAD 5.44872
420 2Y6Q FAD 5.44872
421 2Y6Q I7T 5.44872
422 3GF4 FAD 5.44872
423 3GF4 UPG 5.44872
424 5TDF 7A3 5.44872
425 6C4M NAP 5.44872
426 4XYB NDP 5.44872
427 4O0L NDP 5.45455
428 1UXG NAD 5.50162
429 1UXG FUM 5.50162
430 5K6A NAP 5.55556
431 4CM9 NAP 5.55556
432 3BMN NAP 5.55556
433 4CLR NAP 5.55556
434 3BMO NAP 5.55556
435 3BMQ NAP 5.55556
436 5JCJ NAP 5.55556
437 5JDC NAP 5.55556
438 5JDI NAP 5.55556
439 4CM4 NAP 5.55556
440 3JQF NAP 5.55556
441 4CM8 NAP 5.55556
442 3JQA NAP 5.55556
443 3JQG NAP 5.55556
444 4CMI NAP 5.55556
445 3JQ9 NAP 5.55556
446 3JQ7 NAP 5.55556
447 4CME NAP 5.55556
448 3JQB NAP 5.55556
449 4CLO NAP 5.55556
450 3JQ8 NAP 5.55556
451 2EXX NAP 5.55556
452 4CME KTZ 5.55556
453 5JDC 6JP 5.55556
454 3JQ8 DX3 5.55556
455 1VL8 NAP 5.61798
456 4YEF 4CQ 5.61798
457 1FUT 2GP 5.66038
458 3KIF GDL 5.66038
459 4OSP NAP 5.70342
460 1PR9 NAP 5.7377
461 3D3W NAP 5.7377
462 2NUO BGC 5.7377
463 2HYQ MAN MAN 5.7377
464 2GUC MAN 5.7377
465 2NU5 NAG 5.7377
466 2OOR NAD 5.74713
467 3GFS FMN 5.74713
468 3TN7 NJP 5.76923
469 2HJR APR 5.76923
470 3H5N ATP 5.76923
471 2GZ3 NAP 5.76923
472 1KYZ SAH 5.76923
473 4PTN PYR 5.76923
474 4N49 SAM 5.76923
475 5WP4 SAH 5.76923
476 1WD4 AHR 5.76923
477 5M67 ADE 5.76923
478 5M67 3D1 5.76923
479 5M67 NAD 5.76923
480 4D04 NAP 5.76923
481 4D04 FAD 5.76923
482 4DPL NAP 5.76923
483 1Z82 NDP 5.76923
484 1LLU NAD 5.76923
485 1EZ4 NAD 5.76923
486 4M3P HCS 5.76923
487 1E1M NAP 5.76923
488 1E1M FAD 5.76923
489 2WHL MAN BMA BMA 5.78231
490 2O4C NAD 5.78947
491 6CI9 NAP 5.79151
492 6CI9 F3V 5.79151
493 4D3F NAP 5.80645
494 3OID NDP 5.81395
495 1HYH NAD 5.82524
496 5NC1 NAG 5.90717
497 3SJ7 NDP 5.95238
498 6BE0 COA 5.96026
499 2VZ0 NAP 5.97015
500 2VZ0 D64 5.97015
501 2WD7 NAP 5.97015
502 4E13 NAD 6.00707
503 4QED NAP 6.04839
504 4KWI 1TJ 6.08365
505 4KWI NAP 6.08365
506 1G8S MET 6.08696
507 4PVD NDP 6.08974
508 1PL6 NAD 6.08974
509 1LDN NAD 6.08974
510 5OC1 FAD 6.08974
511 4LWP SAH 6.08974
512 2Z3Y F2N 6.08974
513 2VHW NAI 6.08974
514 5YV5 ADP 6.08974
515 1PL6 572 6.08974
516 5Y77 FAD 6.08974
517 1XG5 NAP 6.09319
518 2F1K NAP 6.09319
519 1E3W NAD 6.13027
520 2PEZ DAT 6.14525
521 1Q7B NAP 6.14754
522 1HDR NAD 6.14754
523 1E6W NAD 6.15385
524 5B4T NAD 6.15385
525 5B4T 3HR 6.15385
526 1VE3 SAM 6.1674
527 3KIH GDL 6.18557
528 5CG1 NAD BBN 6.22951
529 1GEG NAD 6.25
530 6F9Q NAD 6.25
531 4RF2 NAP 6.25
532 1YXM ADE 6.27063
533 5WUW NAP 6.27178
534 4PLT NAI 6.34441
535 4PLT OXM 6.34441
536 1ZK4 NAP 6.3745
537 1ZK4 AC0 6.3745
538 3VPD CIT 6.40569
539 3K5I AIR 6.41026
540 5A1T NAI 6.41026
541 5LD5 NAD 6.41026
542 5A1T OXM 6.41026
543 5HSA FAS 6.41026
544 4W6Z 8ID 6.41026
545 5UAV TFB 6.41026
546 5THY SAH 6.41026
547 5UAV NDP 6.41026
548 5THZ SAH 6.41026
549 3GEG NAD 6.47773
550 1NNU TCT 6.55022
551 1NNU NAD 6.55022
552 1EDO NAP 6.55738
553 6BII NAP 6.60661
554 1UAY ADN 6.61157
555 1FK8 NAD 6.61479
556 2JL1 NAP 6.62021
557 2DKN NAI 6.66667
558 3QWI CUE 6.66667
559 3QWI NAP 6.66667
560 4ZA2 NAD 6.71937
561 5YEC ATP 6.72269
562 1H5Q NAP 6.73077
563 1Y1P NMN AMP PO4 6.73077
564 4PLG OXM 6.73077
565 4PLG NAI 6.73077
566 1MUU NAD 6.73077
567 6ER9 NAP 6.73077
568 5UIV ADP 6.73077
569 6ER9 FAD 6.73077
570 4M52 FAD 6.73077
571 3TII ANP 6.73077
572 3G5S FAD 6.73077
573 5VN0 NAI 6.73077
574 5MZI FAD 6.73077
575 5MZI FYK 6.73077
576 1IY8 NAD 6.74157
577 3F6R FMN 6.75676
578 1XKQ NDP 6.78571
579 1JJV ATP 6.79612
580 5A96 GTP 6.82731
581 1XXR MAN 6.8323
582 5FEU NAP 6.87285
583 4JGP PYR 6.91244
584 4YAG NAI 6.92042
585 3A28 NAD 6.97674
586 2VT3 ATP 6.97674
587 1BW9 NAD 7.05128
588 1C1X NAD 7.05128
589 4KOA NDP 7.05128
590 1CT9 GLN 7.05128
591 2WPF FAD 7.05128
592 2WPF WPF 7.05128
593 3NJ4 AFX 7.05128
594 3NJ4 NAD 7.05128
595 3T31 DCQ 7.05128
596 5J5Z FAD 7.05128
597 3T31 FAD 7.05128
598 5U8U FAD 7.05128
599 1HDC CBO 7.08661
600 4IJ6 SEP 7.109
601 3OIG NAD 7.14286
602 1BDB NAD 7.22022
603 5GT9 NAP 7.22433
604 4URF NAD 7.25806
605 1QG6 NAD 7.27969
606 1QG6 TCL 7.27969
607 3NUG NAD 7.28745
608 5O42 9JW 7.29927
609 5O42 NAD 7.29927
610 5O42 BGC 7.29927
611 1V6A TRE 7.37179
612 2JJQ SAH 7.37179
613 1BXG NAD 7.37179
614 1F8F NAD 7.37179
615 5AOV NAP 7.44048
616 1XSE NDP 7.45763
617 3ZV6 4HB 7.47331
618 3ZV6 NAD 7.47331
619 5L95 AMP 7.5
620 1YQC GLV 7.64706
621 1U7T TDT 7.66284
622 1U7T NAD 7.66284
623 3I6I NDP 7.69231
624 5FA5 MTA 7.69231
625 1RM0 D6P 7.69231
626 1RM0 NAI 7.69231
627 1LDM NAD 7.69231
628 1LVL NAD 7.69231
629 2CUN 3PG 7.69231
630 4GQB 0XU 7.69231
631 2DBZ NAP 7.69231
632 3LKZ SFG 7.69231
633 1J0X NAD 7.69231
634 3TWO NDP 7.69231
635 1YC5 NCA 7.72358
636 4BUZ NAD 7.72358
637 5FFF NAP 7.7821
638 5FFF 5XC 7.7821
639 4CNG SAH 7.84314
640 1LK7 DER 7.86026
641 1VM6 NAD 7.89474
642 5OCM NAP 7.90378
643 1TJY PAV 7.91139
644 2BGM NAJ 7.91367
645 4NBU NAI 8
646 2QZZ NAP 8.01282
647 2QZZ EMF 8.01282
648 1MV8 NAD 8.01282
649 2JHP SAH 8.01282
650 4AP3 NAP 8.01282
651 4AP3 FAD 8.01282
652 2Q7V FAD 8.01282
653 4NFE BEN 8.01688
654 3G89 SAM 8.03213
655 3CH6 NAP 8.04196
656 3CH6 311 8.04196
657 1AE1 NAP 8.05861
658 4M1U A2G MBG 8.08081
659 1C3M MAN MAN 8.16327
660 3VZS CAA 8.17121
661 3VZS NAP 8.17121
662 3AY6 NAI 8.17844
663 3AY6 BGC 8.17844
664 6FS8 E4Z 8.29268
665 1A5Z NAD 8.33333
666 6AA8 NAD 8.33333
667 1KOL NAD 8.33333
668 5LY1 PPI 8.33333
669 4Z0H NAD 8.33333
670 3S1S SAH 8.33333
671 4Q9N NAI 8.38926
672 2ZAT NAP 8.46154
673 4JK3 NAD 8.49421
674 4PIV NDP 8.65385
675 4LHD GLY 8.65385
676 1DJN ADP 8.65385
677 1O94 ADP 8.65385
678 1HDG NAD 8.65385
679 1PS9 FAD 8.65385
680 1YQT ADP 8.65385
681 3A06 NDP 8.65385
682 1X87 NAD 8.65385
683 1DQN IMU 8.69565
684 3VPH NAD 8.70968
685 3VPH OXM 8.70968
686 1R18 SAH 8.81057
687 1JAY NAP 8.96226
688 4MO2 FAD 8.97436
689 4MO2 FDA 8.97436
690 1FEC FAD 8.97436
691 3FPZ AHZ 8.97436
692 4RPL FAD 8.97436
693 4RPL 3UC 8.97436
694 2IXB A2G 8.97436
695 2IXB NAD 8.97436
696 2GDZ NAD 8.98876
697 2PD4 NAD 9.09091
698 2PD4 DCN 9.09091
699 1YC4 43P 9.09091
700 4MPO AMP 9.15033
701 3BXO SAM 9.20502
702 2ZQO NGA 9.23077
703 1YFZ IMP 9.26829
704 1WTC ACP 9.28793
705 3ULK NDP 9.29487
706 3CIF NAD 9.29487
707 3CIF G3H 9.29487
708 2AG5 NAD 9.34959
709 1E6E FAD 9.375
710 1EJ0 SAM 9.44444
711 4D42 NAP 9.57447
712 4D42 W0I 9.57447
713 1V35 NAI 9.61539
714 1PJS NAD 9.61539
715 5X20 NAD 9.61539
716 3S5W NAP 9.61539
717 5AYV NAP 9.70874
718 1TZD ADP 9.81818
719 6C4T NA7 9.9359
720 6GAS FAD 9.9359
721 4NTC FAD 9.9359
722 4NTD FAD 10
723 2EWM NAD 10.0402
724 2BD0 NAP 10.2459
725 4O1M NAD 10.2564
726 3ABI NAD 10.2564
727 6BQ6 TER 10.2564
728 2HMT NAI 10.4167
729 1V59 NAD 10.5769
730 1V59 FAD 10.5769
731 3RKR NAP 10.687
732 5U5N NAD 10.7527
733 4NBT NAD 10.8333
734 3QV1 NAD 10.9756
735 4POO SAM 11
736 5G4L NDP 11.1888
737 3GFB NAD 11.2179
738 3UOY FAD 11.2179
739 3UOY NAP 11.2179
740 1H82 GZZ 11.2179
741 4KIB SAH 11.2179
742 1H82 FAD 11.2179
743 3GXA MET 11.2727
744 4GDX GLU 11.2821
745 5T2U NAP 11.2903
746 2YPI PGA 11.336
747 3RJ5 NAD 11.4173
748 3O9Z AKG 11.5385
749 3O9Z NAD 11.5385
750 5G3U ITW 11.5385
751 5G3U FDA 11.5385
752 2DFV NAD 11.5385
753 4KBA 1QM 11.5385
754 4J4H 1J1 11.583
755 4J4H NAI 11.583
756 1MXH DHF 11.5942
757 1MXH NAP 11.5942
758 5O0J 8BR 11.859
759 5O98 NAP 12.1795
760 2NV2 GLN 12.2549
761 1JG3 ADN 12.3404
762 4HA6 FAD 12.5
763 1CF2 NAP 12.5
764 1HE1 AF3 12.5926
765 4QTU SAM 12.5926
766 3IR1 MET 12.6531
767 4BVA NDP 12.8205
768 5OF1 SAL 12.8571
769 3WUR O4B 12.8655
770 2CUL FAD 12.931
771 5ZZ6 ADP 12.9808
772 5ZZ6 NAD 12.9808
773 1G0N PHH 13.0742
774 1G0N NDP 13.0742
775 1I36 NAP 13.2576
776 2WA2 SAM 13.4058
777 1TUK PGM 13.4328
778 3HB5 NAP 13.4615
779 1KJ8 GAR 13.4615
780 3ZIA ADP 13.7681
781 5WXU FLC 13.7821
782 5OJI NAP 13.8462
783 5OJI ISN 13.8462
784 2VUT NAD 13.9535
785 2HK9 ATR 14.1026
786 4YSX FAD 14.1026
787 4YSX MLI 14.1026
788 5F5N NAD 14.1869
789 1PZM 5GP 14.218
790 5L4S 6KX 14.4231
791 5L4S NAP 14.4231
792 1A27 NAP 14.5329
793 4RDH AMP 14.5833
794 4RDI ATP 14.5833
795 5EB4 FAD 14.7436
796 4YAC NAI 14.8148
797 1GEE NAD 14.9425
798 1DRV A3D 15.0183
799 5ERG SAM 15.0641
800 5N2I NAP 15.0862
801 4D79 ATP 15.5797
802 3WV8 ATP 16.055
803 4CP8 MLI 16.3462
804 5Z2L NDP 16.7347
805 1GRN AF3 17.2775
806 2NGR AF3 17.2775
807 3QVP FAD 17.3077
808 5L4L NAP 17.6282
809 5L4L 7OX 17.6282
810 5YW5 ADE 18.4358
811 3O03 NAP 18.5567
812 4ZU3 4SD 18.9427
813 1VL0 NAI 19.1781
814 4R1S NAP 19.2308
815 3AYI FAD 19.2308
816 3AYI HCI 19.2308
817 2DC1 NAD 19.4915
818 5GWT SIN 19.7842
819 5GWT NAD 19.7842
820 4U7W NDP 21.7949
821 4II2 ATP 22.6994
822 5BJX NAD 22.7564
823 5BJX UDP 22.7564
824 5ZEC NAP 24.359
825 5K4W THR 25.3205
826 5K4W NAI 25.3205
827 2C29 NAP 26.2821
828 2C29 DQH 26.2821
829 3H9E NAD 26.2821
830 1UZN NAP 26.3158
831 3A4V PYR 26.9231
832 3A4V NAD 26.9231
833 3O26 NDP 27.3312
834 3RFV NAI 29.2135
835 3RFV 15L 29.2135
836 2AE2 PTO 29.2308
837 2AE2 NAP 29.2308
838 2PZM NAD 31.4103
839 2PZM UDP 31.4103
840 1I2B USQ 31.7308
841 1I2B NAD 31.7308
842 1I2B UPG 31.7308
843 4G5H UD7 32.3718
844 4G5H NAP 32.3718
845 4TQG NDP 33.0128
846 1RKX NAD 33.3333
847 5Y1G AKB 33.9744
848 5Y1G NAD 33.9744
849 2Q1W NAD 34.2949
850 1LSS NAD 35.7143
851 2GN4 UD1 37.1795
852 2GN4 NDP 37.1795
853 3WMX NAD 37.1795
854 2YY7 NAD 37.5
855 4HEQ FMN 37.6712
856 2Q1S NAI 39.1026
857 1RPN NDP 42.6282
858 5Z75 NAD 43.9103
859 1E7S NAP 43.9103
860 1WVG APR 44.2308
861 1OC2 TDX 44.5513
862 1OC2 NAD 44.5513
863 2X6T NAP 44.5513
864 2PK3 A2R 44.8718
865 1SB8 UD2 45.1923
866 1SB8 NAD 45.1923
867 1N7G NDP 45.8333
868 1N7G GDR 45.8333
869 2C5A GDC 46.1538
870 2C5A NAD 46.1538
871 5IN4 6CK 46.1538
872 5IN4 GDP 46.1538
873 5IN4 NAP 46.1538
874 1EQ2 NAP 46.7742
875 1KEW NAD 46.7949
876 1KEW TYD 46.7949
877 1ORR NAD 47.1154
878 1R6D NAD 47.7564
879 1R6D DAU 47.7564
880 1BXK NAD 47.7564
881 3LU1 NAD 48.7179
882 6BWL NAD 49.0385
Pocket No.: 2; Query (leader) PDB : 3KO8; Ligand: NAD; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3ko8.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
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