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Receptor
PDB id Resolution Class Description Source Keywords
3LX5 1.9 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF MGMPPNP-BOUND NFEOB FROM S. THERMOPHILU STREPTOCOCCUS THERMOPHILUS G PROTEIN IRON TRANSPORT GTP-BINDING GTPASE TRANSMEMBRANNUCLEOTIDE-BINDING METAL TRANSPORT
Ref.: POTASSIUM-ACTIVATED GTPASE REACTION IN THE G PROTEI FERROUS IRON TRANSPORTER B. J.BIOL.CHEM. V. 285 14594 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
AGO A:300;
Valid;
none;
submit data
653.327 C18 H22 N7 O14 P3 CNc1c...
GOL A:400;
Invalid;
none;
submit data
92.094 C3 H8 O3 C(C(C...
MG A:301;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4NON 2.5 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF GDP-BOUND A143S MUTANT OF THE S. THERMO FEOB G-DOMAIN STREPTOCOCCUS THERMOPHILUS G PROTEIN IRON TRANSPORT GTPASE TRANSMEMBRANE METAL TRANGTP BINDING
Ref.: STRUCTURAL AND FUNCTIONAL ANALYSIS OF A FEOB A143S MUTANT EXPLAINS THE ACCELERATED GDP RELEASE RATE. FEBS J. V. 281 2254 2014
Members (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 3B1V - GGM C18 H24 N7 O14 P3 CNc1ccccc1....
2 4NON Kd = 5.71 uM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 3B1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 3B1Y - GNH C10 H16 N6 O10 P2 c1nc2c(n1[....
5 3TAH - BGO C18 H22 N6 O12 P2 CNc1ccccc1....
6 3LX5 - AGO C18 H22 N7 O14 P3 CNc1ccccc1....
70% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 175 families.
1 3B1V - GGM C18 H24 N7 O14 P3 CNc1ccccc1....
2 4NON Kd = 5.71 uM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 3B1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 3B1Y - GNH C10 H16 N6 O10 P2 c1nc2c(n1[....
5 3TAH - BGO C18 H22 N6 O12 P2 CNc1ccccc1....
6 3LX5 - AGO C18 H22 N7 O14 P3 CNc1ccccc1....
50% Homology Family (11)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 3B1V - GGM C18 H24 N7 O14 P3 CNc1ccccc1....
2 4NON Kd = 5.71 uM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 3B1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 3B1Y - GNH C10 H16 N6 O10 P2 c1nc2c(n1[....
5 3TAH - BGO C18 H22 N6 O12 P2 CNc1ccccc1....
6 3LX5 - AGO C18 H22 N7 O14 P3 CNc1ccccc1....
7 2WIC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 4R98 - GNH C10 H16 N6 O10 P2 c1nc2c(n1[....
9 3A1S Kd = 14.8 uM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 3A1U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 3A1T Kd = 14.8 uM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: AGO; Similar ligands found: 18
No: Ligand ECFP6 Tc MDL keys Tc
1 AGO 1 1
2 GGM 0.677686 0.9875
3 BGO 0.6 0.9625
4 GNP 0.504202 0.91358
5 9GM 0.504202 0.91358
6 DBG 0.422819 0.938272
7 G3D 0.420635 0.9
8 GDP 0.414634 0.888889
9 DGI 0.414634 0.86747
10 G4P 0.414062 0.9
11 G1R 0.412698 0.901235
12 GP3 0.406504 0.91358
13 GTP 0.404762 0.888889
14 DGT 0.401575 0.86747
15 GCP 0.401575 0.86747
16 0O2 0.401515 0.9
17 GNH 0.4 0.901235
18 Y9Z 0.4 0.829545
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4NON; Ligand: GDP; Similar sites found with APoc: 609
This union binding pocket(no: 1) in the query (biounit: 4non.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
1 1GXU 2HP None
2 3B7G ANP None
3 5KK4 44E None
4 5GOE GDP 1.15385
5 1QXA GLY GLY GLY 1.70213
6 1M7G AV2 1.89573
7 1M7G ADP 1.89573
8 1M7G ADX 1.89573
9 2Y65 ADP 1.92308
10 4PX9 ADP 1.92308
11 1P72 ADP 1.92308
12 5H7J GCP 2.30769
13 3EC1 GDP 2.30769
14 4ZKD GDP 2.30769
15 5IRR GSP 2.30769
16 4QOS ADP 2.30769
17 2IYL GDP 2.30769
18 4ZNL BEF ADP 2.30769
19 2J0V GDP 2.35849
20 3DKP ADP 2.44898
21 1ION ADP 2.46914
22 2CBZ ATP 2.53165
23 5BXV MGP 2.60417
24 3IUY AMP 2.63158
25 5TSH ADP 2.69231
26 5TSH ANP 2.69231
27 2RCN GDP 2.69231
28 4JLV ADP 2.69231
29 1XKV ATP 2.69231
30 4D81 ADP 2.69231
31 2GDJ ANP 2.69231
32 4IEE AGS 2.69231
33 4KBF AMP 2.69231
34 1I0B PEL 2.69231
35 1CR1 TTP 2.69231
36 4DDY DN6 2.69231
37 2OZE AGS 2.69231
38 5L3W GDP 2.69231
39 2X7I CIT 2.69231
40 3R7F CP 2.69231
41 3FYH ADP 2.69231
42 1IHU AF3 2.71647
43 1IHU ADP 2.71647
44 1T3D CYS 2.76817
45 3FIU POP 2.81124
46 4E03 ADP 2.91262
47 1G3Q ADP 2.95359
48 5H7K GDP 3.07692
49 1V8K ANP 3.07692
50 3MD0 GDP 3.07692
51 5IFS ADP 3.07692
52 1R6B ADP 3.07692
53 5Y6N ADP 3.07692
54 5EXT ADP 3.07692
55 6FAA ADP 3.07692
56 1FNN ADP 3.07692
57 1NY5 ADP 3.07692
58 4ZDJ UTP 3.07692
59 4GK9 MAN BMA MAN MAN MAN 3.07692
60 4RZ3 ADP 3.07692
61 3HU3 AGS 3.07692
62 1NJF AGS 3.2
63 1NJF ADP 3.2
64 5NM7 GLY 3.38346
65 3P4X ADP 3.38983
66 2PL3 ADP 3.38983
67 1BG2 ADP 3.46154
68 1RRC ADP 3.46154
69 4AG5 ADP 3.46154
70 6AU6 GDP 3.46154
71 5ZXD ATP 3.46154
72 1XP8 AGS 3.46154
73 2OBM ADP 3.46154
74 2IS6 ADP 3.46154
75 1G6O ADP 3.46154
76 2Q2Y ADP 3.46154
77 2Q2Y MKR 3.46154
78 2I4I AMP 3.46154
79 1QF5 RPL 3.46154
80 1QF5 GDP 3.46154
81 3BD9 A3P 3.46154
82 5I34 GDP 3.46154
83 1EK0 GNP 3.52941
84 3VX3 ADP 3.62903
85 1D5C GDP 3.7037
86 3QXC ATP 3.71901
87 1NN5 2DT 3.72093
88 1NN5 ANP 3.72093
89 1SKQ GDP 3.84615
90 4LC1 GDP 3.84615
91 5JCP GDP ALF 3.84615
92 5WC2 ADP 3.84615
93 5ZBR ANP 3.84615
94 2ZR9 DTP 3.84615
95 4LYA ATP 3.84615
96 4R43 GDP 3.84615
97 2QZ4 ADP 3.84615
98 1OYY AGS 3.84615
99 6B4K ANP 3.84615
100 5FJJ MAN 3.84615
101 5YLF BGC 3.84615
102 2C9O ADP 3.84615
103 3VM7 GLC 3.84615
104 3DC4 ADP 3.84615
105 5AHO TLA 3.84615
106 3T5G GDP 3.8674
107 2BEK ATP 3.89105
108 6BSX GDP 3.93258
109 6BSX E7S 3.93258
110 1Z83 AP5 4.08163
111 4LJ9 ACP 4.12979
112 4LPS GDP 4.13223
113 4NU0 AP5 4.14747
114 3TMK T5A 4.16667
115 3FB4 AP5 4.16667
116 3A3B RBF 4.21053
117 2VVG ADP 4.23077
118 3AB3 GDP 4.23077
119 1FQJ GDP 4.23077
120 1FQK GDP 4.23077
121 1ZCB GDP 4.23077
122 1BH2 GSP 4.23077
123 2WKQ GTP 4.23077
124 1Y3A GDP 4.23077
125 2OM2 GDP 4.23077
126 1W0J ADP 4.23077
127 2CK3 ANP 4.23077
128 5KSZ GCP 4.23077
129 3EZ2 ADP 4.23077
130 5I0H ADP BEF 4.23077
131 5J1J ANP 4.23077
132 3Q9L ATP 4.23077
133 5Z69 AGS 4.23077
134 2FNA ADP 4.23077
135 2J5V PCA 4.23077
136 6CS8 F9Y 4.23077
137 2ZJ5 ADP 4.23077
138 1W0J ADP BEF 4.23077
139 1LVK MNT BEF 4.23077
140 5WRI A3P 4.23077
141 1FQK ALF 4.23077
142 2XZ9 PYR 4.23077
143 1GPJ CIT 4.23077
144 1FQJ ALF 4.23077
145 3FVQ ATP 4.23077
146 5WRJ A3P 4.23077
147 5BQ5 ADP BEF 4.2328
148 4KFU ACP 4.24528
149 2ODE ALF GDP 4.25532
150 4R2I ANP 4.28571
151 2YOH WMJ 4.28571
152 3LN9 FLC 4.31655
153 3KJI ADP 4.33071
154 4OI4 ATP 4.34783
155 5FUI APY 4.54545
156 4JLS 3ZE 4.60526
157 4J0Q GDP 4.61538
158 3U6B GDP 4.61538
159 5W7Q GDP 4.61538
160 5W76 GDP 4.61538
161 3U6K GDP 4.61538
162 5CK5 GDP 4.61538
163 5W75 GDP 4.61538
164 2BVN GNP 4.61538
165 2AWN ADP 4.61538
166 2C77 GNP 4.61538
167 3E70 GDP 4.61538
168 2C78 GNP 4.61538
169 1D2E GDP 4.61538
170 4XGU ADP 4.61538
171 4G5G GDP 4.61538
172 1D8T GDP 4.61538
173 5JBQ GDP 4.61538
174 3FWY ADP 4.61538
175 2CE7 ADP 4.61538
176 5VGR GDP 4.61538
177 2GK6 ADP 4.61538
178 1VKJ A3P 4.61538
179 5VHC BEF ADP 4.61538
180 2ZPA ADP 4.61538
181 1E2K TMC 4.61538
182 4A4Z ANP 4.61538
183 2QEN ADP 4.61538
184 5IRN ADP 4.61538
185 4GOX A3P 4.61538
186 2GKS ADP 4.61538
187 1QF9 ALF 4.63918
188 1QF9 C5P 4.63918
189 1QF9 ADP 4.63918
190 4TTQ ATP 4.65116
191 4V03 ADP 4.66926
192 4X8O AP5 4.6729
193 3H86 AP5 4.6875
194 2GCO GNP 4.97512
195 2GCN GDP 4.97512
196 1T5C ADP 5
197 4RD0 GDP 5
198 4H1V GNP 5
199 3NHB ADP 5
200 1UPT GTP 5
201 5LB3 ADP 5
202 1P9B GDP 5
203 4WEI GLC GAL 5
204 4FCW ADP 5
205 4G86 BNT 5
206 2Y8E GNP 5.02793
207 5Z2M GTP 5.07246
208 1NF3 GNP 5.12821
209 5GVR LMR 5.12821
210 1KO8 6PG 5.14286
211 1OW3 GDP 5.18135
212 6B8B ADP 5.22088
213 1A4R GNH 5.2356
214 1A4R GDP 5.2356
215 1GRN GDP 5.2356
216 4ITR GDP 5.2356
217 2NGR GDP 5.2356
218 2NGR AF3 5.2356
219 5WDR GNP 5.26316
220 2WMO GTP 5.26316
221 2CHG ANP 5.30973
222 1JJV ATP 5.33981
223 5IRC GDP 5.37634
224 4PC3 GDP 5.38462
225 3LRE ADP 5.38462
226 1YQT ADP 5.38462
227 4WZ6 ATP 5.38462
228 1XMV ADP 5.38462
229 3DZD ADP 5.38462
230 1R0X ATP 5.38462
231 4XTR ADP 5.38462
232 1MJT ITU 5.38462
233 2FSH ANP 5.38462
234 1IN4 ADP 5.38462
235 2WOJ ADP ALF 5.38462
236 2IXE ATP 5.38462
237 4GBM A3P 5.38462
238 4XTR ATP 5.38462
239 4XVU ATP 5.38462
240 2VWT PYR 5.38462
241 4D0N GDP 5.40541
242 3LXR GDP 5.40541
243 6BCB GSP 5.40541
244 6BC0 GSP 5.40541
245 5HPY GDP 5.40541
246 3CX8 GSP 5.41872
247 1RYH GNP 5.41872
248 1KMQ GNP 5.43478
249 4YC7 GNP 5.52486
250 2G77 GDP 5.55556
251 5MVR ADP 5.55556
252 2G77 AF3 5.55556
253 3IIJ ADP 5.55556
254 1Z6T ADP 5.58376
255 4XSH GSP 5.58659
256 4U5X GNP 5.61798
257 1TX4 ALF GDP 5.64972
258 4BQS K2Q 5.68182
259 4BQS ADP 5.68182
260 1I4D GDP 5.72917
261 1E96 GTP 5.72917
262 5G3Y ADP 5.75221
263 1G7S GDP 5.76923
264 1FP6 ADP 5.76923
265 3FKQ ATP 5.76923
266 1U0J ADP 5.76923
267 1K6M AGS 5.76923
268 2B8W ALF 5GP 5.76923
269 4IOK XPO 5.76923
270 2Z5F A3P 5.76923
271 4IOK ADP 5.76923
272 5KSP GDP 5.78947
273 3SBD GNP 5.88235
274 1MH1 GNP 5.91398
275 2W58 ADP 5.94059
276 2W2X GSP 5.94595
277 3MJH GTP 5.95238
278 2EW1 GNP 5.97015
279 1G4U GDP 5.97826
280 1S3G AP5 5.99078
281 5OEC GDP 6.01093
282 3BER AMP 6.0241
283 2QG6 NMN 6.03015
284 6AIC AMP 6.07477
285 2PZE ATP 6.11354
286 3TKL GTP 6.12245
287 1CS4 GSP 6.13208
288 1GOJ ADP 6.15385
289 4B47 GDP 6.15385
290 4WZA ACP 6.15385
291 4WZA ADP 6.15385
292 5M7P ADP 6.15385
293 4OHY ANP 6.15385
294 1NST A3P 6.15385
295 2FJU GSP 6.17978
296 1HE1 GDP 6.25
297 2CJW GDP 6.25
298 1HE1 AF3 6.25
299 4CVN ADP 6.28272
300 4LHW GNP 6.32184
301 3TNF GNP 6.32184
302 2A9K GDP 6.41711
303 2FFQ GSP 6.43275
304 1ZIN AP5 6.45161
305 4MKF AP5 6.45161
306 1G16 GDP 6.47059
307 4V0K GDP 6.50888
308 3Q85 GNP 6.50888
309 1Y63 ADP 6.52174
310 4BAS GNP 6.53266
311 1YRB GDP 6.53846
312 2NCD ADP 6.53846
313 2DPY ADP 6.53846
314 4HSE ADP 6.53846
315 2XAU ADP 6.53846
316 5HR5 ADP 6.53846
317 4KVA GTP 6.53846
318 5MZN ADP 6.53846
319 2JLR ANP 6.53846
320 5E5U MLI 6.53846
321 5AK0 8V1 6.53846
322 1Y4Z PCI 6.53846
323 3BFX A3P 6.53846
324 1ZUI SKM 6.54762
325 3X1Z GNP 6.58683
326 4HDO GNP 6.58683
327 4HDQ GNP 6.58683
328 3KTA AP5 6.59341
329 1XEX ATP 6.59341
330 6BCA GSP 6.62252
331 3SFV GDP 6.62983
332 2EFE GNH 6.62983
333 1DS6 GDP 6.66667
334 4QRH 0O2 6.66667
335 3E5H GNP 6.74157
336 6H5E ANP 6.77291
337 1GWN GTP 6.82927
338 3EWA ANP 6.8323
339 1GOT GDP 6.84932
340 2A5F GTP 6.85714
341 1ZC3 GNP 6.85714
342 2HT6 GDP 6.89655
343 1WDT GTP 6.92308
344 6C90 ADP 6.92308
345 5LTJ ADP 6.92308
346 5LTJ BEF 6.92308
347 1YXM ADE 6.92308
348 4DKX GDP 6.94444
349 1HTW ADP 6.96203
350 5XKT GNP 7
351 2F9L GDP 7.03518
352 4M9Q GNP 7.04846
353 4KAX GTP 7.10059
354 3RAB GNP 7.10059
355 1U8Z GDP 7.14286
356 3BC1 GNP 7.17949
357 1MR3 G3D 7.18232
358 5O74 GDP 7.22222
359 3M1I GTP 7.30594
360 3WYF GTP 7.30594
361 3RC3 ANP 7.30769
362 4IDN GNP 7.30769
363 2GMV PEP 7.30769
364 3IO3 ADP 7.30769
365 3N5C GDP 7.40741
366 3NKV GNP 7.42857
367 1G7C 5GP 7.44681
368 3RWO GDP 7.56757
369 1M7B GTP 7.6087
370 5KUT GDP 7.69231
371 6A20 ADP 7.69231
372 3CPJ GDP 7.69231
373 2FAH GDP 7.69231
374 1DCP HBI 7.69231
375 1F9V ADP 7.69231
376 4KVG GTP 7.7381
377 5JCZ GDP 7.82123
378 3Q72 GNP 7.83133
379 4LX0 BEF GDP 7.9096
380 1MKY GDP 8.07692
381 1F5N GNP 8.07692
382 4PFO ADP 8.07692
383 1UAD GNP 8.08081
384 5ZB0 TYD 8.08081
385 5ZB0 ADP 8.08081
386 4C4P GNP 8.09249
387 2HV8 GTP 8.13953
388 1VHT BA3 8.25688
389 5UPK GNP 8.33333
390 2D7C GTP 8.38323
391 5UWI GNP 8.43882
392 5UWR GNP 8.43882
393 5UWJ GNP 8.43882
394 6CIT GNP 8.43882
395 5UWP GNP 8.43882
396 5UWU GNP 8.43882
397 5UWW GNP 8.43882
398 5UWO GNP 8.43882
399 5DHF GNP 8.43882
400 5UWH GNP 8.43882
401 5UWQ GNP 8.43882
402 5DI9 GNP 8.43882
403 5UWS GNP 8.43882
404 3ZFD ANP 8.46154
405 3T34 GDP 8.46154
406 2O0J ADP 8.46154
407 2VB6 ADP BEF 8.72483
408 3WYG GTP 8.79121
409 3VMF GTP 8.84615
410 1SVK ALF GDP 8.84615
411 2WHX ADP 8.84615
412 1SQ5 ADP 8.84615
413 3DEF GDP 8.84615
414 5K5Z ANP 8.84615
415 4NE2 SH2 8.84615
416 4NE2 ADP 8.84615
417 3BFV ADP 8.84615
418 3GJ4 GDP 9.04977
419 3GJ3 GDP 9.04977
420 3GJ7 GDP 9.04977
421 3GJ5 GDP 9.04977
422 3GJ8 GDP 9.04977
423 3GJ0 GDP 9.04977
424 4IHQ ADP 9.23077
425 5L3S GNP 9.23077
426 1G41 ADP 9.23077
427 5L3V GDP 9.23077
428 4PJ3 ANP 9.23077
429 5L3S G 9.23077
430 2BIF SIN 9.23077
431 4ZG4 VO4 ADP 9.23077
432 2BIF ANP 9.23077
433 5H4S RAM 9.23077
434 5UIV ADP 9.2511
435 5BXQ GDP 9.25926
436 3CH5 GDP 9.25926
437 1IBR GNP 9.25926
438 3GJX GTP 9.25926
439 4HAT GNP 9.25926
440 4XOI GTP 9.25926
441 2HF9 GSP 9.29204
442 5EE5 GTP 9.38967
443 3ZIA ATP 9.42029
444 3ZIA ADP 9.42029
445 1XX6 ADP 9.42408
446 1X1R GDP 9.55056
447 4P4T GDP 9.61539
448 3BOS CDP 9.61539
449 5XDR ADP 9.61539
450 1TAD GDP 10
451 1TAD ALF 10
452 5KDO GDP 10
453 1D6Z HY1 10
454 4YS0 ADP 10
455 5H67 ATP 10
456 5ABU GTG 10
457 5LLB 6YZ 10
458 1B7T ADP 10.2564
459 2ZTS ADP 10.3586
460 4YJ1 ADP 10.3846
461 1IWE IMP 10.3846
462 4Q1A UDP 10.3846
463 4Q1A 2XZ 10.3846
464 1KK8 BEF ADP 10.3896
465 4DID GDP 10.5263
466 5UQW GDP 10.582
467 5OCG GNP 10.582
468 5H0U HIS HIS HIS HIS HIS HIS 10.5882
469 5U32 GDP 10.5932
470 1UJ2 ADP 10.7143
471 1UJ2 C5P 10.7143
472 4FRZ ADP 10.7692
473 1DAR GDP 10.7692
474 1H65 GDP 10.7692
475 3TK1 GDP 10.7692
476 1YTM ATP 10.7692
477 5TB5 GDP 10.8108
478 5TAR GDP 10.8108
479 3UIE ANP 11
480 4PPF FLC 11.1538
481 3WYA GDP 11.1538
482 1X6V ADP 11.1538
483 1DAK DPU 11.1607
484 1DAK ADP 11.1607
485 4YDS ATP 11.4035
486 1OFH ADP 11.4943
487 2OG2 MLI 11.5385
488 1WF3 GNP 11.5385
489 5N69 ADP 11.5385
490 6FA4 GNP 11.5607
491 5O2T GSP 11.8343
492 3QF7 ANP 12
493 5WLB GNP 12.0482
494 1KY3 GDP 12.0879
495 2C5L GTP 12.1387
496 3QBT GNP 12.1429
497 4K81 GTP 12.2807
498 2XT3 ADP 12.3077
499 3PCR GTP 12.3457
500 2D2F ADP 12.4
501 5E95 GDP 12.5
502 2D7D ADP 12.5
503 1LFD GNP 12.5749
504 6D5M GNP 12.5749
505 6D55 GNP 12.5749
506 6D59 GNP 12.5749
507 6BVM GNP 12.5749
508 6D5L GNP 12.5749
509 6BVJ GNP 12.5749
510 6D56 GNP 12.5749
511 6D5V GNP 12.5749
512 6D5E GNP 12.5749
513 6BVL GNP 12.5749
514 6D5H GNP 12.5749
515 6BVK GNP 12.5749
516 6D5J GNP 12.5749
517 6D5G GNP 12.5749
518 6BVI GNP 12.5749
519 3H4S ADP 12.5926
520 2KIN ADP 12.605
521 1CLU DBG 12.6506
522 2UZI GTP 12.6506
523 1NVV GNP 12.6506
524 3DDC GNP 12.6506
525 1WQ1 GDP 12.6506
526 1WQ1 AF3 12.6506
527 6CRK GDP 12.6761
528 1GP2 GDP 12.6761
529 3B9Q MLI 12.6923
530 5M04 GDP 12.6923
531 5L3R GCP 12.6923
532 1RJ9 GCP 12.8289
533 2QN6 GDP 12.9032
534 2OFW ADX 12.9808
535 1SVM ATP 13.0769
536 4P3Y GDP 13.1868
537 1KK1 GNP 13.4615
538 2XTZ GSP 13.4615
539 1GUA GNP 13.5802
540 1LVG ADP 13.6364
541 5LEF GTP 13.6364
542 3A4M ADP 13.8462
543 5FTB ANP 13.8462
544 5FHD ADP ALF 13.8462
545 1TU3 GNP 13.9241
546 2FH5 GTP 14.0187
547 2PEZ DAT 14.5251
548 2PEZ GGZ 14.5251
549 4HI0 GDP 14.5669
550 3CNL GNP 14.6154
551 3CV2 OXL 14.6154
552 3KUD GDP 14.8148
553 3REF GDP 14.9485
554 1KAO GDP 14.9701
555 5HCN GCP 15
556 2V7Q ADP 15.1515
557 2V7Q ATP 15.1515
558 2W83 GTP 15.5844
559 5DIF GNP 15.7895
560 5XC5 GTP 15.9091
561 3WXM GTP 16.1538
562 3ZQ6 ADP ALF 16.5385
563 1CXZ GSP 17.4419
564 4QM7 GTP 17.5439
565 6G14 G4P 17.6923
566 2CDN ADP 17.9104
567 1PUJ GNP 18.0769
568 2XTN GTP 18.3761
569 3WY9 GDP 18.75
570 3T12 GDP ALF 19.697
571 3T1O GDP 19.697
572 6DEF GCP 20
573 4D0G GTP 20.2899
574 3ZS9 ADP ALF 21.0526
575 5BN3 ADP 21.1538
576 4WOP CTP 21.3333
577 3DOE GTP 21.875
578 1BO4 COA 22.0238
579 3AQ4 GDP 22.2826
580 1KSH GDP 22.5806
581 2VOH CIT 23.0769
582 2GJ8 ALF GDP 23.2558
583 2X77 GDP 23.8095
584 4YLG GDP 24.2775
585 2QTV GNP 24.5509
586 3TBK ANP 24.6154
587 5SZH GNP 24.8366
588 1Z0N BCD 25
589 2J59 GTP 25.3012
590 4DCT GDP 25.3846
591 1GG6 APL 26.8041
592 4ZI2 GNP 27.3684
593 4GOJ GNP 27.5132
594 2BME GNP 27.957
595 1SVI GDP 28.2051
596 1TQ4 GDP 28.4615
597 1FZQ GDP 28.7293
598 4TMZ GSP 28.8462
599 4NCN GTP 28.8462
600 1W7J ADP BEF 29.2308
601 3P13 RIP 30.5556
602 2ZEJ GDP 32.0652
603 2HCJ GDP 32.4324
604 5YV5 ADP 33.3333
605 5DI3 GNP 33.5135
606 5YT0 GDP 34.6154
607 5FG3 GDP 34.6154
608 3PQC GDP 36.4103
609 5UWT GNP 39.1304
Pocket No.: 2; Query (leader) PDB : 4NON; Ligand: GDP; Similar sites found with APoc: 135
This union binding pocket(no: 2) in the query (biounit: 4non.bio2) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 2IL4 COA None
2 2CJF RP4 None
3 2VZZ SCA 1.83486
4 5TVJ COA 1.92308
5 5TVJ 7LF 1.92308
6 4LY9 S6P 1.92308
7 4LY9 1YY 1.92308
8 1Q20 A3P 2.30769
9 1Q20 PLO 2.30769
10 1T8U UAP SGN IDS SGN 2.30769
11 1T8U A3P 2.30769
12 1J99 AND 2.30769
13 3SXN COA 2.30769
14 3MGB PAP 2.30769
15 1XVV CCQ 2.30769
16 2A2C NG1 2.30769
17 2A2C ADP 2.30769
18 4ZY1 4U5 2.30769
19 4JD3 COA 2.69231
20 4JD3 PLM 2.69231
21 3ITJ CIT 2.69231
22 4D42 W0I 2.69231
23 4D42 NAP 2.69231
24 1BOB ACO 2.69231
25 5LY1 PPI 2.69231
26 3OZ2 FAD 2.69231
27 5BYK OAQ 2.7027
28 5BYK A3P 2.7027
29 1OS1 PYR 3.07692
30 1OS1 ATP 3.07692
31 1G3M A3P 3.07692
32 1G3M PCQ 3.07692
33 2ZPT A3P 3.07692
34 6ECT SAM 3.07692
35 5K6A NAP 3.07692
36 2GWH A3P 3.07692
37 2VZ0 NAP 3.07692
38 2VZ0 D64 3.07692
39 3JQ8 NAP 3.07692
40 4CM9 NAP 3.07692
41 4CM4 NAP 3.07692
42 4UTG ANP 3.07692
43 5EP2 AZU 3.125
44 2QQ0 TMP 3.26087
45 2QQ0 ADP 3.26087
46 2QQ0 THM 3.26087
47 2QQ0 ANP 3.26087
48 1V8B NAD 3.46154
49 1U1I NAD 3.46154
50 4R3L COA 3.46821
51 5TIV A3P 3.55731
52 1MAI I3P 3.81679
53 1QHG ATP 3.84615
54 1S7N COA 3.84615
55 4PSW COA 3.84615
56 2YNC YNC 3.84615
57 2JAQ DCP 3.90244
58 1OE0 TTP 3.91304
59 1UKZ ADP 3.94089
60 2B8T THM 4.03587
61 1AKY AP5 4.09091
62 4BFW ZVW 4.23077
63 2CK3 ADP 4.23077
64 4M52 FAD 4.23077
65 1AQU A3P 4.23077
66 4EN4 ATP 4.23077
67 4EN4 GT0 4.23077
68 4EN4 GT1 4.23077
69 4Q9N 0WE 4.23077
70 1KUV CA5 4.34783
71 3E1T FAD 4.61538
72 4TMK T5A 4.69484
73 4NSQ COA 4.73684
74 4M0R 644 4.74934
75 4ITM ATP 4.7619
76 2RGX AP5 4.85437
77 5J1S ATP 4.87805
78 5O96 SAM 4.89796
79 5H68 AGS 5
80 2JJK R15 5.02959
81 4TL6 ANP 5.13834
82 5HGZ ACO 5.34979
83 1CM0 COA 5.35714
84 2O4C NAD 5.38462
85 1CJW COT 5.42169
86 4UXH T5A 5.43478
87 5KF9 ACO 5.76923
88 4JD0 1KH 5.9761
89 3ORF NAD 5.9761
90 4HUT ATP 6.28272
91 4MKG AP5 6.45161
92 2JDC CAO 6.84932
93 3QVV 3QV 6.92308
94 3QVV A3P 6.92308
95 4KVX ACO 7.05128
96 2ZE7 DST 7.11462
97 2ZE7 AMP 7.11462
98 2GMV UN8 7.30769
99 1NHX FTB 7.30769
100 1NHX PEP 7.30769
101 5EW9 5VC 7.30769
102 4E5N NAD 7.30769
103 1P31 EPU 7.30769
104 2D1S SLU 7.30769
105 5G41 AP5 7.62332
106 1OQC FAD 8
107 3RLF ANP 8.07692
108 5MEX SZZ 8.07692
109 5MEX PAP 8.07692
110 6GAS FAD 8.07692
111 5XXS COA 8.33333
112 1W5T ANP 8.46154
113 1W5T ADP 8.46154
114 4M1U MBG A2G 8.57143
115 2VBQ BSJ 9.69697
116 3WR7 COA 10
117 1F2U ATP 10.0671
118 3R96 ACO 10.1064
119 3R96 AMP 10.1064
120 2BOS GLA GAL GLC NBU 10.2941
121 2BOS GLA GAL GLC 10.2941
122 4I9B 1KA 10.3846
123 3H4V NAP 10.7692
124 3H4V DVP 10.7692
125 2F3R G5P 11.1111
126 2ORV 4TA 12.3932
127 3V2U ATP 12.6923
128 1X8J A3P 14.2308
129 5K04 COA 14.7059
130 6C0B MLI 14.7436
131 1X9I G6Q 15
132 5LU5 M7P 15.736
133 1W4R TTP 15.8974
134 3UNN MET GLU ASP TPO GLN ALA ILE ASP 15.9292
135 3QKT ANP 16.1538
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