Receptor
PDB id Resolution Class Description Source Keywords
3MJH 2.03 Å EC: 3.6.5.2 CRYSTAL STRUCTURE OF HUMAN RAB5A IN COMPLEX WITH THE C2H2 ZI OF EEA1 HOMO SAPIENS PROTEIN-ZINC FINGER COMPLEX BETA BETA ALPHA FOLD BETA HAIRRAB5A GTPASE EEA1 PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS FOR RAB GTPASE RECOGNITION AND END TETHERING BY THE C2H2 ZINC FINGER OF EARLY ENDOSOMA AUTOANTIGEN 1 (EEA1). PROC.NATL.ACAD.SCI.USA V. 107 10866 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GTP A:200;
C:200;
Valid;
Valid;
none;
none;
submit data
523.18 C10 H16 N5 O14 P3 c1nc2...
MG A:201;
C:201;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
ZN B:70;
D:70;
Part of Protein;
Part of Protein;
none;
none;
submit data
65.409 Zn [Zn+2...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3MJH 2.03 Å EC: 3.6.5.2 CRYSTAL STRUCTURE OF HUMAN RAB5A IN COMPLEX WITH THE C2H2 ZI OF EEA1 HOMO SAPIENS PROTEIN-ZINC FINGER COMPLEX BETA BETA ALPHA FOLD BETA HAIRRAB5A GTPASE EEA1 PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS FOR RAB GTPASE RECOGNITION AND END TETHERING BY THE C2H2 ZINC FINGER OF EARLY ENDOSOMA AUTOANTIGEN 1 (EEA1). PROC.NATL.ACAD.SCI.USA V. 107 10866 2010
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 17 families.
1 3MJH - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 14 families.
1 3MJH - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 3MJH - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GTP; Similar ligands found: 147
No: Ligand ECFP6 Tc MDL keys Tc
1 GTP 1 1
2 GP3 0.921053 0.973684
3 GDP 0.909091 1
4 GSP 0.853659 0.948718
5 GNH 0.82716 0.986667
6 G1R 0.819277 0.986667
7 GAV 0.811765 0.961039
8 GNP 0.809524 0.973684
9 GCP 0.797619 0.973684
10 5GP 0.797468 0.986486
11 G 0.797468 0.986486
12 GMV 0.764706 0.973684
13 G2R 0.764045 0.961039
14 G5P 0.755319 0.973684
15 GTG 0.752688 0.936709
16 G2P 0.747126 0.961039
17 G3A 0.744681 0.973684
18 GDD 0.741935 0.961039
19 GKE 0.741935 0.961039
20 GDC 0.741935 0.961039
21 0O2 0.736264 0.986486
22 GP2 0.729412 0.961039
23 6CK 0.726316 0.936709
24 Y9Z 0.723404 0.902439
25 GPG 0.717391 0.961039
26 GFB 0.715789 0.961039
27 GDR 0.715789 0.961039
28 GDP MG 0.712644 0.923077
29 GDP BEF 0.704545 0.9
30 GPD 0.704082 0.925
31 JB2 0.693878 0.961039
32 GKD 0.693878 0.961039
33 GCP G 0.692308 0.935065
34 GDX 0.686869 0.973684
35 ALF 5GP 0.685393 0.888889
36 GTP MG 0.681319 0.923077
37 BEF GDP 0.681319 0.888889
38 GH3 0.681319 0.973333
39 YGP 0.677083 0.901235
40 G3D 0.67033 0.986486
41 GDP AF3 0.659574 0.888889
42 GDP ALF 0.659574 0.888889
43 DGT 0.659341 0.923077
44 GMP 0.658228 0.88
45 G4P 0.655914 0.986486
46 JB3 0.653846 0.948718
47 NGD 0.647619 0.961039
48 CAG 0.642202 0.880952
49 2MD 0.62963 0.891566
50 G G 0.622449 0.935065
51 MGP 0.619565 0.961039
52 U2G 0.616822 0.936709
53 6G0 0.612903 0.961039
54 MGD 0.612613 0.891566
55 TPG 0.608696 0.840909
56 CG2 0.605505 0.936709
57 GDP 7MG 0.601942 0.911392
58 FEG 0.601852 0.879518
59 ZGP 0.59633 0.869048
60 MD1 0.591304 0.891566
61 PGD 0.591304 0.925
62 3GP 0.590909 0.946667
63 GPX 0.581633 0.946667
64 DGI 0.580645 0.923077
65 IDP 0.576087 0.972973
66 DBG 0.567797 0.948718
67 FE9 0.555556 0.776596
68 2GP 0.555556 0.96
69 G4M 0.547619 0.880952
70 BGO 0.544643 0.924051
71 I2C FE2 CMO CMO 0.538462 0.808989
72 ATP 0.537634 0.92
73 G1G 0.533898 0.925
74 AQP 0.531915 0.92
75 5FA 0.531915 0.92
76 G A A A 0.525862 0.923077
77 U A G G 0.521368 0.935065
78 01G 0.518868 0.902439
79 ITT 0.510638 0.868421
80 P2G 0.510638 0.883117
81 GGM 0.504274 0.901235
82 G1R G1R 0.504065 0.924051
83 DGP 0.5 0.910256
84 PGD O 0.5 0.850575
85 MGO 0.5 0.864198
86 P1G 0.5 0.871795
87 DG 0.5 0.910256
88 GTA 0.495495 0.936709
89 B4P 0.489362 0.894737
90 AP5 0.489362 0.894737
91 IMP 0.489362 0.959459
92 7DT 0.484536 0.906667
93 G G U 0.482143 0.935065
94 GPC 0.479339 0.879518
95 G C 0.478992 0.9
96 BA3 0.478723 0.894737
97 ADP 0.473684 0.92
98 G2Q 0.471698 0.961039
99 G7M 0.46875 0.948052
100 25L 0.458716 0.907895
101 A2D 0.457447 0.894737
102 RGT 0.45045 0.909091
103 AGS 0.45 0.873418
104 SAP 0.45 0.873418
105 SGP 0.44898 0.82716
106 U G A 0.448529 0.888889
107 A4P 0.445378 0.869048
108 G G G RPC 0.442623 0.875
109 ACQ 0.441176 0.896104
110 ANP 0.441176 0.896104
111 8GT 0.441176 0.875
112 APC G U 0.44 0.886076
113 G U34 0.438017 0.888889
114 6AD 0.436893 0.841463
115 G G G C 0.433071 0.9125
116 UP5 0.432203 0.873418
117 35G 0.431373 0.933333
118 C2E 0.431373 0.921053
119 PCG 0.431373 0.933333
120 A G C C 0.429688 0.911392
121 5GP 5GP 0.427184 0.883117
122 TAT 0.427184 0.884615
123 APR 0.425743 0.894737
124 AR6 0.425743 0.894737
125 AN2 0.424242 0.907895
126 7DD 0.424242 0.906667
127 DG DG 0.423423 0.865854
128 AD9 0.421569 0.896104
129 M33 0.42 0.883117
130 7D4 0.42 0.835443
131 UCG 0.419847 0.911392
132 H6Y 0.419048 0.946667
133 G C C C 0.416667 0.924051
134 ACP 0.415842 0.896104
135 T5A 0.414634 0.802326
136 MGQ 0.412844 0.935897
137 ADQ 0.412844 0.871795
138 A1R 0.412844 0.839506
139 MGT 0.411215 0.823529
140 A G U 0.410072 0.888889
141 93A 0.41 0.833333
142 A22 0.407407 0.907895
143 CA0 0.405941 0.896104
144 ATF 0.40566 0.884615
145 AGO 0.404762 0.888889
146 MGV 0.401786 0.890244
147 CGP 0.4 0.86747
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3MJH; Ligand: GTP; Similar sites found: 393
This union binding pocket(no: 1) in the query (biounit: 3mjh.bio2) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1A4R GDP 0.00000000001093 0.6875 None
2 1A4R GNH 0.00000000001286 0.67276 None
3 1GRN GDP 0.00000000004267 0.65054 None
4 2NGR GDP 0.000000000008706 0.62828 None
5 2NGR AF3 0.00000001198 0.49831 None
6 1GRN AF3 0.00000002275 0.49065 None
7 1GXU 2HP 0.000539 0.47374 None
8 2BEK ATP 0.0001649 0.47135 None
9 2IYL GDP 0.000004228 0.45433 None
10 2PEZ GGZ 0.0008119 0.44056 None
11 2PEZ DAT 0.0008119 0.44056 None
12 3QXC ATP 0.0007478 0.43427 None
13 1NN5 ANP 0.002599 0.41837 None
14 4ZNL BEF ADP 0.000138 0.40434 None
15 2PZE ATP 0.000002548 0.40324 None
16 4V03 ADP 0.00001382 0.44753 1.19048
17 3A4M ADP 0.000006339 0.41926 1.19048
18 4LC1 GDP 0.000000002838 0.74379 1.78571
19 5L3W GDP 0.000009532 0.45764 1.78571
20 1FP6 ADP 0.00003321 0.44059 1.78571
21 4DID GDP 0.0000000002376 0.58862 1.97368
22 4ITR GDP 0.000000007369 0.58483 2.38095
23 2OFW ADX 0.0007646 0.44948 2.38095
24 2BIF ANP 0.00077 0.44291 2.38095
25 2BIF SIN 0.001413 0.44264 2.38095
26 4D81 ADP 0.0003059 0.40619 2.38095
27 3EWA ANP 0.00009699 0.40108 2.38095
28 4FCW ADP 0.0002921 0.40055 2.38095
29 3U6B GDP 0.00000000004211 0.84896 2.97619
30 2BVN GNP 0.000000000005018 0.83723 2.97619
31 1D8T GDP 0.0000000001159 0.57919 2.97619
32 5JBQ GDP 0.0000000001281 0.57739 2.97619
33 4G5G GDP 0.000000000134 0.57696 2.97619
34 3U6K GDP 0.0000000001594 0.57633 2.97619
35 4LPS GDP 0.00000005489 0.51361 2.97619
36 1QF5 GDP 0.000248 0.48144 2.97619
37 2C9O ADP 0.0002745 0.42826 2.97619
38 1CR1 TTP 0.0003773 0.4226 2.97619
39 2HCJ GDP 0.00000000002905 0.5801 2.98507
40 3P4X ADP 0.00002777 0.41544 3.1477
41 2VOH CIT 0.01548 0.40517 3.18471
42 3QKT ANP 0.001036 0.42209 3.57143
43 1OS1 PYR 0.002017 0.42147 3.57143
44 1OS1 ATP 0.002019 0.41999 3.57143
45 2ZR9 DTP 0.0000439 0.41359 3.57143
46 5MVR ADP 0.00004112 0.4152 3.7037
47 1F2U ATP 0.001713 0.41978 4.02685
48 2C78 GNP 0.000000000008639 0.71525 4.16667
49 1WDT GTP 0.000000001023 0.71052 4.16667
50 2C77 GNP 0.00000000001142 0.69977 4.16667
51 3FKQ ATP 0.00002605 0.52176 4.16667
52 1G7C 5GP 0.0000002718 0.49174 4.16667
53 5VGR GDP 0.0003259 0.47229 4.16667
54 1YTM ATP 0.0002312 0.46954 4.16667
55 4WOP CTP 0.00004351 0.45874 4.16667
56 1L2T ATP 0.0008407 0.43398 4.16667
57 1Y63 ADP 0.00001687 0.42689 4.16667
58 1XMV ADP 0.0000501 0.41786 4.16667
59 1XP8 AGS 0.00006609 0.40365 4.16667
60 4CVN ADP 0.00001021 0.58489 4.37956
61 2WIC GNP 0.000000006575 0.71441 4.7619
62 1TQ4 GDP 0.00000002681 0.63974 4.7619
63 4H1V GNP 0.000001198 0.58206 4.7619
64 3WY9 GDP 0.0000000001107 0.57044 4.7619
65 3WYA GDP 0.0000000003479 0.56964 4.7619
66 5M04 GDP 0.000000001198 0.54784 4.7619
67 3ZS9 ADP ALF 0.00002215 0.49576 4.7619
68 5FTB ANP 0.0001801 0.49459 4.7619
69 2WOJ ADP ALF 0.0000294 0.49082 4.7619
70 5FHD ADP ALF 0.0003271 0.46303 4.7619
71 1M7G ADX 0.0002232 0.46213 4.7619
72 2ZTS ADP 0.0006634 0.45395 4.7619
73 1M7G ADP 0.0002998 0.45367 4.7619
74 1M7G AV2 0.000001495 0.44679 4.7619
75 4E03 ADP 0.00003411 0.43356 4.7619
76 3VM7 GLC 0.01234 0.43077 4.7619
77 1G3Q ADP 0.00003566 0.42906 4.7619
78 1ION ADP 0.00007402 0.42531 4.7619
79 1ZIN AP5 0.003054 0.42518 4.7619
80 4MKF AP5 0.003373 0.42441 4.7619
81 1UJ2 C5P 0.001422 0.42304 4.7619
82 3FB4 AP5 0.003635 0.42197 4.7619
83 1UJ2 ADP 0.001549 0.42154 4.7619
84 2QZ4 ADP 0.0001201 0.41468 4.7619
85 3TMK T5A 0.004223 0.40695 4.7619
86 1QF9 C5P 0.007892 0.40449 4.7619
87 1QF9 ADP 0.007892 0.40449 4.7619
88 1QF9 ALF 0.007892 0.40449 4.7619
89 2VF7 ADP 0.0001247 0.40387 4.7619
90 4P4T GDP 0.0000004785 0.59265 5.35714
91 3MD0 GDP 0.0000000008477 0.54338 5.35714
92 1DAK DPU 0.00005498 0.50169 5.35714
93 1Z6T ADP 0.0003768 0.46944 5.35714
94 3KJI ADP 0.00004404 0.44205 5.35714
95 3VX3 ADP 0.0001112 0.43924 5.35714
96 1DAK ADP 0.007452 0.43841 5.35714
97 2RGX AP5 0.002897 0.42826 5.35714
98 1F9V ADP 0.000002251 0.42446 5.35714
99 4X8O AP5 0.004259 0.42404 5.35714
100 1IN4 ADP 0.0003042 0.4193 5.35714
101 3BFV ADP 0.00004963 0.41851 5.35714
102 2WMO GTP 0.0000000000004955 0.68228 5.95238
103 4NON GDP 0.00000003174 0.58434 5.95238
104 3PQC GDP 0.00000000766 0.55342 5.95238
105 4R98 GNH 0.0000001503 0.50133 5.95238
106 4QOS ADP 0.0005102 0.47327 5.95238
107 5K5Z ANP 0.0001198 0.45967 5.95238
108 1ZUI SKM 0.000366 0.45908 5.95238
109 4RZ3 ADP 0.0001111 0.43448 5.95238
110 2QG6 NMN 0.003026 0.41136 5.95238
111 4YMU ATP 0.00002714 0.4085 5.95238
112 2AWN ADP 0.000000192 0.40278 5.95238
113 2XTZ GSP 0.0000000002167 0.69416 6.54762
114 2RCN GDP 0.00000000002113 0.60222 6.54762
115 4MKG AP5 0.002803 0.42675 6.54762
116 3H4S ADP 0.0000004588 0.42617 6.54762
117 4FRZ ADP 0.000001882 0.42493 6.54762
118 1S3G AP5 0.003317 0.42365 6.54762
119 1XKV ATP 0.0002245 0.40851 6.54762
120 2WJG GDP 0.000000002656 0.74521 7.14286
121 1AZT GSP 0.0000000004577 0.69005 7.14286
122 3A1S GDP 0.00000003007 0.53473 7.14286
123 1IWE IMP 0.0005389 0.49548 7.14286
124 1H65 GDP 0.000009875 0.4895 7.14286
125 3COB ADP 0.0000002393 0.43324 7.14286
126 3UIE ANP 0.00003768 0.43019 7.14286
127 3IIJ ADP 0.00001271 0.42873 7.14286
128 5X40 ACP 0.001184 0.41483 7.14286
129 4QM7 GTP 0.00005451 0.41029 7.14286
130 1OXV ANP 0.00002427 0.4073 7.14286
131 2WJH GDP 0.000000001714 0.56907 7.22892
132 2WJH FLC 0.0000002534 0.50635 7.22892
133 2ODE ALF GDP 0.0000000006737 0.68323 7.7381
134 1SVK ALF GDP 0.000000001199 0.67574 7.7381
135 1BH2 GSP 0.000000001571 0.66828 7.7381
136 2OM2 GDP 0.000001141 0.56929 7.7381
137 1GP2 GDP 0.000001396 0.55312 7.7381
138 1Y3A GDP 0.0000005239 0.54616 7.7381
139 2QEN ADP 0.00002518 0.45291 7.7381
140 3BFX A3P 0.001978 0.43299 7.7381
141 1SVM ATP 0.006755 0.41718 7.7381
142 2ZPA ADP 0.000624 0.40887 7.7381
143 1NY5 ADP 0.0005596 0.4052 7.7381
144 3NHB ADP 0.000009019 0.40235 7.7381
145 4NCN GTP 0.000000000003084 0.7437 7.87746
146 5KDO GDP 0.000001374 0.51773 8.10811
147 1NRJ GTP 0.00000000009782 0.66996 8.22785
148 1HTW ADP 0.00004033 0.4236 8.22785
149 1JI0 ATP 0.00002473 0.56491 8.33333
150 2OZE AGS 0.0002567 0.42527 8.33333
151 1G41 ADP 0.00009716 0.41838 8.33333
152 5HR5 ADP 0.000233 0.41719 8.33333
153 5LTJ ADP 0.00007766 0.41458 8.33333
154 1OFH ADP 0.0001424 0.41458 8.33333
155 5GJC ATP 0.00007576 0.40705 8.33333
156 5FG3 GDP 0.00000000006735 0.57557 8.82353
157 4Q1A UDP 0.003993 0.46891 8.82353
158 4Q1A 2XZ 0.003993 0.46891 8.82353
159 4XGU ADP 0.00009982 0.43265 8.82353
160 1SQ5 ADP 0.00002405 0.43082 8.82353
161 1BG2 ADP 0.00000008207 0.42856 8.82353
162 5G41 AP5 0.004256 0.42405 8.82353
163 5TSH ANP 0.00004234 0.41261 8.82353
164 5IRR GSP 0.000000001785 0.68181 8.92857
165 1CS4 GSP 0.0000000003119 0.66244 8.92857
166 5HCN GCP 0.000000001931 0.56566 8.92857
167 5I0H ADP BEF 0.0000002292 0.54077 8.92857
168 1NJF AGS 0.000184 0.44115 8.92857
169 1LVG ADP 0.00000104 0.4394 8.92857
170 1NJF ADP 0.0001468 0.43258 8.92857
171 4TTQ ATP 0.00009713 0.41097 8.92857
172 1G7S GDP 0.00000000237 0.73579 9.52381
173 3WXM GTP 0.0000000000722 0.71325 9.52381
174 1ZCB GDP 0.0000002448 0.572 9.52381
175 3AB3 GDP 0.0000000603 0.56659 9.52381
176 3EZ2 ADP 0.0001919 0.51168 9.52381
177 2NCD ADP 0.000001949 0.63 10.119
178 3B9Q MLI 0.00002678 0.57474 10.119
179 5GOE GDP 0.000000002959 0.56619 10.119
180 1K6M AGS 0.0006328 0.42544 10.119
181 5H56 TYD 0.00229 0.41922 10.119
182 5H56 ADP 0.00229 0.41922 10.119
183 4HSE ADP 0.00005786 0.41466 10.119
184 2JLR ANP 0.0003424 0.40735 10.119
185 1SKQ GDP 0.000000001926 0.53987 10.7143
186 5L3R GCP 0.000001968 0.52931 10.7143
187 2FNA ADP 0.0001894 0.4688 10.7143
188 4XVU ATP 0.00007893 0.46129 10.7143
189 1D2N ANP 0.0009453 0.41002 10.7143
190 4XTR ATP 0.00007687 0.46165 10.8108
191 4XTR ADP 0.00009335 0.44173 10.8108
192 5KSZ GCP 0.00000007286 0.52663 11.3095
193 4AG5 ADP 0.00001235 0.58774 11.7647
194 4P3Y GDP 0.00000000005211 0.57484 11.7647
195 5J1J ANP 0.00005268 0.46736 11.7647
196 4IEE AGS 0.001518 0.46617 11.7647
197 1FNN ADP 0.0006067 0.45566 11.7647
198 2KIN ADP 0.0000001014 0.42714 11.7647
199 3CNL GNP 0.000000001797 0.53747 11.9048
200 2Q2Y ADP 0.0003462 0.46524 11.9048
201 2Q2Y MKR 0.0003811 0.46224 11.9048
202 4KVA GTP 0.00002204 0.41412 11.9048
203 1PUJ GNP 0.00000000109 0.59443 12.5
204 3Q9L ATP 0.00003617 0.44937 12.5
205 3T34 GDP 0.000006532 0.52527 13.0952
206 5KSP GDP 0.00000002665 0.52706 13.6905
207 1IHU ADP 0.0001149 0.45395 13.6905
208 1IHU AF3 0.00009154 0.45175 13.6905
209 4PX9 ADP 0.000138 0.40044 14.2857
210 1GOJ ADP 0.00000009156 0.71748 14.7059
211 3ZFD ANP 0.0000000363 0.53211 14.7059
212 3IO3 ADP 0.0001139 0.43839 14.7059
213 1W0J ADP 0.0000418 0.43695 14.7059
214 3ZIA ADP 0.00008562 0.42581 14.7059
215 3ZIA ATP 0.0000341 0.42546 14.7059
216 2IXE ATP 0.0006215 0.42027 14.7059
217 1R6B ADP 0.0001028 0.41287 14.7059
218 2CHG ANP 0.0004012 0.41043 14.7059
219 1UKZ ADP 0.005712 0.40685 14.7059
220 1W0J ADP BEF 0.0007923 0.40661 14.7059
221 5IFS ADP 0.0002291 0.40444 14.7059
222 3QF7 ANP 0.00108 0.40026 14.7059
223 2XTN GTP 0.00000107 0.53343 14.881
224 3H86 AP5 0.0006714 0.44675 15.4762
225 4LYA ATP 0.00004588 0.42386 15.4762
226 2HF9 GSP 0.0000001672 0.62061 16.0714
227 1SVI GDP 0.00000000005319 0.57702 16.0714
228 4WZA ACP 0.00003667 0.52673 16.0714
229 4WZA ADP 0.00003667 0.52673 16.0714
230 3BER AMP 0.01243 0.41555 16.0714
231 1WF3 GNP 0.0000000007556 0.67547 16.6667
232 4BQS ADP 0.00006132 0.52965 16.6667
233 3E70 GDP 0.000006408 0.4557 16.6667
234 4BQS K2Q 0.003605 0.4176 16.6667
235 5CK5 GDP 0.000000001388 0.54442 17.6471
236 4ZG4 VO4 ADP 0.0000008019 0.53633 17.6471
237 1G6O ADP 0.00009342 0.50802 17.6471
238 5L3S GNP 0.00001533 0.49445 17.6471
239 5L3V GDP 0.000004368 0.46776 17.6471
240 2CK3 ANP 0.0008692 0.44877 17.6471
241 1X6V ADP 0.0007395 0.43773 17.6471
242 2V7Q ATP 0.00002605 0.4365 17.6471
243 2FAH GDP 0.00009013 0.4325 17.6471
244 2CK3 ADP 0.001278 0.43002 17.6471
245 1P9B GDP 0.0002113 0.42725 17.6471
246 3LRE ADP 0.0000004956 0.41488 17.6471
247 1NHX FTB 0.007731 0.41194 17.6471
248 1NHX PEP 0.007628 0.41125 17.6471
249 2GMV UN8 0.004217 0.40552 17.6471
250 2CE7 ADP 0.0002048 0.40446 17.6471
251 1T8U UAP SGN IDS SGN 0.0106 0.40221 17.6471
252 5LB3 ADP 0.00009459 0.40157 17.6471
253 2GMV PEP 0.006526 0.40061 17.6471
254 3CX8 GSP 0.0000000003861 0.69306 17.8571
255 5TIV A3P 0.009259 0.40764 17.8571
256 4OI4 ATP 0.0007264 0.42278 19.6429
257 4J0Q GDP 0.0000000001415 0.8223 20.2381
258 2DPY ADP 0.0001189 0.52945 20.2381
259 5J1S ATP 0.001666 0.41431 20.3252
260 1TAD ALF 0.0000000007285 0.68185 20.5882
261 1TAD GDP 0.0000000007285 0.68185 20.5882
262 2ZFI ADP 0.000001617 0.60765 20.5882
263 1FQK GDP 0.0000001306 0.5696 20.5882
264 1GOT GDP 0.0000008471 0.53184 20.5882
265 5BQ5 ADP BEF 0.0001273 0.50169 20.5882
266 4OHY ANP 0.00002775 0.49439 20.5882
267 1V8K ANP 0.0000002676 0.48622 20.5882
268 1KK8 BEF ADP 0.000008451 0.46744 20.5882
269 4IDN GNP 0.0000384 0.46621 20.5882
270 3DC4 ADP 0.0000006291 0.44884 20.5882
271 1FQK ALF 0.00000006872 0.44606 20.5882
272 1P72 ADP 0.001309 0.43201 20.5882
273 1B7T ADP 0.00004284 0.43006 20.5882
274 4O48 ASP 0.02544 0.40942 20.5882
275 3VMF GTP 0.00000000006036 0.71636 20.8333
276 4TMZ GSP 0.000000000007056 0.73033 21.4286
277 2X77 GDP 0.0000000001979 0.59162 21.4286
278 3ZQ6 ADP ALF 0.00002657 0.49259 23.5294
279 3FWY ADP 0.000008237 0.4698 23.5294
280 2XT3 ADP 0.0000004586 0.42647 23.5294
281 5I34 GDP 0.00005576 0.42553 23.5294
282 4IOK ADP 0.001521 0.42346 23.5294
283 4IOK XPO 0.001201 0.42025 23.5294
284 4GOX A3P 0.0009865 0.41837 23.5294
285 2QQ0 ANP 0.004856 0.40852 23.5294
286 2QQ0 TMP 0.005128 0.40754 23.5294
287 2QQ0 THM 0.004509 0.40719 23.5294
288 1R0X ATP 0.00003157 0.40195 23.5294
289 4ZI2 GNP 0.000000000001866 0.74096 24.2105
290 4GOJ GNP 0.000000000002556 0.73622 24.3386
291 1YRB GDP 0.0000000004524 0.60308 25
292 1FZQ GDP 0.0000000004697 0.5687 25.4144
293 5KUT GDP 0.000000006275 0.54322 25.5952
294 4RD0 GDP 0.000000000001 0.74893 26.4706
295 1FQJ ALF 0.00000003197 0.72454 26.4706
296 4ZKD GDP 0.0000000000813 0.71443 26.4706
297 1FQJ GDP 0.00000006149 0.60949 26.4706
298 2QN6 GDP 0.00000000007437 0.57297 26.4706
299 3TK1 GDP 0.000000000644 0.53681 26.4706
300 4R43 GDP 0.00008091 0.5237 26.4706
301 5N69 ADP 0.00002235 0.44395 26.4706
302 2Y65 ADP 0.0000004207 0.42796 26.4706
303 1T5C ADP 0.0000002418 0.41895 26.4706
304 1G8S MET 0.02974 0.40596 26.4706
305 4YDS ATP 0.00002289 0.4041 26.4706
306 1KO8 6PG 0.0009264 0.40285 26.4706
307 4YC7 GNP 0.000000000001017 0.74992 26.7857
308 2C04 GCP 0.00009307 0.49683 26.7857
309 1RJ9 GCP 0.0001143 0.48936 26.7857
310 1ZJ6 G3D 0.0000000009564 0.57077 27.381
311 1DAR GDP 0.00000001416 0.53131 27.381
312 1YZG GDP 0.000000001249 0.5687 28.5714
313 4HI0 GDP 0.000001232 0.56785 29.4118
314 3RLF ANP 0.0003065 0.43698 29.4118
315 5IRN ADP 0.00007339 0.42819 29.4118
316 3FVQ ATP 0.0002727 0.4273 29.4118
317 3R7F CP 0.03422 0.40267 29.4118
318 1UPT GTP 0.000000000003579 0.73003 30.4094
319 5DI3 GNP 0.00000000001566 0.76899 30.9524
320 1R4A GNP 0.00000000001172 0.73382 31.5152
321 5EE5 GTP 0.0000000000004822 0.76253 31.5476
322 1KSH GDP 0.00000000000188 0.72748 32.1429
323 3DOE GTP 0.000000000009352 0.72682 32.1429
324 1MR3 G3D 0.000000002457 0.56033 32.1429
325 1KK1 GNP 0.0000000006164 0.55121 32.3529
326 1W7J ADP BEF 0.00001108 0.53849 32.3529
327 2B8W ALF 5GP 0.000005696 0.51113 32.3529
328 1F5N GNP 0.000005792 0.50835 32.3529
329 4KFU ACP 0.000008819 0.41059 32.3529
330 2CBZ ATP 0.000000512 0.68 33.3333
331 4V0K GDP 0.0000001517 0.58662 33.3333
332 3AQ4 GDP 0.000000001784 0.56494 33.9286
333 1S9D GDP 0.000000005469 0.71827 34.1463
334 1RE0 GDP 0.0000000004545 0.55582 34.1463
335 4YLG GDP 0.000000001504 0.5997 35.119
336 4PC3 GDP 0.000000008913 0.56309 35.2941
337 2VB6 ADP BEF 0.00003266 0.47473 35.2941
338 4PFO ADP 0.00009805 0.46786 35.2941
339 2VVG ADP 0.00000009713 0.42769 35.2941
340 1J2J GTP 0.000000000005899 0.77648 35.5422
341 2J59 GTP 0.00000000001264 0.72251 35.5422
342 1O3Y GTP 0.00000000001365 0.72156 35.5422
343 4KAX GTP 0.000000000002957 0.73475 35.7143
344 2A5F GTP 0.00000000001977 0.72539 35.7143
345 3PCR GTP 0.00000000008171 0.72904 35.8025
346 3N5C GDP 0.0000000008363 0.77001 36.4198
347 1F6B GDP 0.00000001943 0.53821 36.9048
348 2W83 GTP 0.00000000000803 0.72998 36.9697
349 1M2O GNP 0.0000000002574 0.69116 38.0952
350 4B47 GDP 0.00000000007473 0.57691 38.0952
351 2ZEJ GDP 0.0000006119 0.55847 38.0952
352 1D2E GDP 0.000000006713 0.56481 38.2353
353 3EC1 GDP 0.000000004304 0.5545 38.2353
354 2QTV GNP 0.0000000003422 0.67737 38.3234
355 1ZD9 GDP 0.0000000002076 0.74109 38.6905
356 2GJ8 ALF GDP 0.0000000002218 0.67924 38.6905
357 1M7B GTP 0.0000000000009318 0.83256 39.881
358 1GWN GTP 0.00000000000149 0.73279 39.881
359 1MKY GDP 0.00000000003172 0.59441 39.881
360 3W5J GDP 0.0000001621 0.44525 41.0714
361 2FH5 GTP 0.0000000000006786 0.74379 41.6667
362 4DCT GDP 0.00000000007136 0.59851 43.4524
363 1NF3 GNP 0.000000000002769 0.76992 44.0476
364 3REF GDP 0.00000000003297 0.69356 44.0476
365 3SBD GNP 0.0000000000001292 0.82317 45.8333
366 2FJU GSP 0.0000000000002554 0.75822 45.8333
367 1HE1 GDP 0.0000000007394 0.70717 45.8333
368 1HE1 AF3 0.0000008903 0.63996 45.8333
369 1I4D GDP 0.00000000003898 0.58327 45.8333
370 1E96 GTP 0.0000000000005319 0.79859 46.4286
371 2WKQ GTP 0.000000000002289 0.79357 46.4286
372 1MH1 GNP 0.000000000001868 0.78035 46.4286
373 2W2X GSP 0.0000000000005062 0.74684 46.4286
374 1DS6 GDP 0.00000000003101 0.59923 46.4286
375 1G4U GDP 0.000000005204 0.5901 46.4286
376 1G4U AF3 0.000002089 0.40189 46.4286
377 3Q85 GNP 0.00000000001179 0.60867 47.0238
378 2J0V GDP 0.00000000002757 0.61367 47.619
379 5JCP GDP ALF 0.000000000005368 0.82321 48.2143
380 1TX4 ALF GDP 0.0000000000006792 0.81549 48.2143
381 4XSH GSP 0.000000000001687 0.71429 48.2143
382 2GCO GNP 0.000000000001382 0.70249 48.2143
383 2GCN GDP 0.0000000001044 0.67464 48.2143
384 1OW3 GDP 0.00000000004801 0.64867 48.2143
385 5HPY GDP 0.00000000007626 0.64209 48.2143
386 5IRC GDP 0.0000000002622 0.59816 48.2143
387 1CXZ GSP 0.00000000000008082 0.7912 48.8095
388 4XOI GTP 0.0000000000005095 0.78752 48.8095
389 1KMQ GNP 0.0000000000004032 0.77853 48.8095
390 3LXR GDP 0.0000000002213 0.77312 48.8095
391 4U5X GNP 0.000000000003576 0.70339 48.8095
392 1XTQ GDP 0.000000000005028 0.7367 49.4048
393 3T5G GDP 0.00000000001713 0.63581 49.4048
394 1JWY GDP 0.000000661 0.50784 50
395 1JWY ADP 0.00001197 0.43814 50
Pocket No.: 2; Query (leader) PDB : 3MJH; Ligand: GTP; Similar sites found: 6
This union binding pocket(no: 2) in the query (biounit: 3mjh.bio1) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5J6Y BGC 0.03187 0.40186 None
2 5J6Y GLC 0.03187 0.40186 None
3 2JBM SRT 0.02328 0.42213 2.38095
4 1QF5 RPL 0.0221 0.41981 2.97619
5 3L8H FX1 0.01968 0.40944 4.7619
6 2OFD NGA 0.03465 0.40295 8.4507
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