-->
Receptor
PDB id Resolution Class Description Source Keywords
3NJQ 2 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF KAPOSI'S SARCOMA-ASSOCIATED HERPESVIRUS IN COMPLEX WITH DIMER DISRUPTOR HUMAN HERPESVIRUS 8 TYPE M PROTEIN-DIMER DISRUPTOR COMPLEX KSHV KSHV PROTEASE HERPESPROTEASE VIRAL PROTEIN-INHIBITOR COMPLEX
Ref.: ENZYME INHIBITION BY ALLOSTERIC CAPTURE OF AN INACT CONFORMATION. J.MOL.BIOL. V. 411 999 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ACT A:1;
Invalid;
none;
submit data
59.044 C2 H3 O2 CC(=O...
GOL B:197;
Invalid;
none;
submit data
92.094 C3 H8 O3 C(C(C...
NJQ A:197;
B:198;
B:199;
Valid;
Valid;
Valid;
none;
none;
none;
Kd = 1.7 uM
428.523 C27 H28 N2 O3 c1ccc...
SO4 B:1;
B:2;
B:3;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3NJQ 2 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF KAPOSI'S SARCOMA-ASSOCIATED HERPESVIRUS IN COMPLEX WITH DIMER DISRUPTOR HUMAN HERPESVIRUS 8 TYPE M PROTEIN-DIMER DISRUPTOR COMPLEX KSHV KSHV PROTEASE HERPESPROTEASE VIRAL PROTEIN-INHIBITOR COMPLEX
Ref.: ENZYME INHIBITION BY ALLOSTERIC CAPTURE OF AN INACT CONFORMATION. J.MOL.BIOL. V. 411 999 2011
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 3NJQ Kd = 1.7 uM NJQ C27 H28 N2 O3 c1ccc(cc1)....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 3NJQ Kd = 1.7 uM NJQ C27 H28 N2 O3 c1ccc(cc1)....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 3NJQ Kd = 1.7 uM NJQ C27 H28 N2 O3 c1ccc(cc1)....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NJQ; Similar ligands found: 5
No: Ligand ECFP6 Tc MDL keys Tc
1 NJQ 1 1
2 24Q 0.772727 0.6
3 25G 0.649485 0.631579
4 8OY 0.641304 0.953488
5 8N4 0.518519 0.773585
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: 194
This union binding pocket(no: 1) in the query (biounit: 3njq.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
1 3KP6 SAL None
2 3D78 NBB None
3 1Q1Y BB2 None
4 4UNR QZE None
5 1UO5 PIH None
6 5CHR 4NC None
7 1UO4 PIH None
8 4WG0 CHD None
9 3G4Q MCH None
10 3WR7 COA None
11 4DK7 0KS 1.03627
12 3KFC 61X 1.03627
13 3L0E G58 1.03627
14 5G57 6M5 1.5544
15 5N7O 69Y 1.5544
16 1ZEM NAD 1.5544
17 6A0S NDP 2.07254
18 3FSM 2NC 2.07254
19 4Q5M ROC 2.07254
20 5JF2 SF7 2.07254
21 1JGS SAL 2.17391
22 4JSR 1NQ 2.59067
23 3B99 U51 2.59067
24 1FCH TYR GLN SER LYS LEU 2.59067
25 4DNJ ANN 2.59067
26 4LRJ ANP 2.95858
27 2HFP NSI 3.10881
28 2P4Y C03 3.10881
29 3G9E RO7 3.10881
30 4HEE 14R 3.10881
31 3ER9 3AT 3.10881
32 6AD9 KK4 3.10881
33 1UR4 B2G 3.10881
34 1UOU CMU 3.10881
35 2GTE VA 3.22581
36 1FCZ 156 3.40426
37 4LWU 20U 3.52941
38 5L7G 6QE 3.62694
39 5MWY YNU 3.62694
40 5HCV 60R 3.62694
41 4UDB CV7 3.62694
42 5IXK 6EW 3.62694
43 5NTW 98N 3.62694
44 4WPF 3SN 3.62694
45 3ZJ0 ACO 3.62694
46 6ESN BWE 3.62694
47 1N7G GDR 3.62694
48 3F3E LEU 3.62694
49 5UC9 MYR 3.62694
50 2A3I C0R 3.62694
51 5T2Z 017 4.0404
52 3MWS 017 4.0404
53 5AAV GW5 4.14508
54 2QZO KN1 4.14508
55 4MG7 27H 4.14508
56 4MGD 27N 4.14508
57 5HYR EST 4.14508
58 3KDU NKS 4.14508
59 3UUD EST 4.14508
60 5E7V M7E 4.14508
61 5WGD EST 4.14508
62 5WGQ EST 4.14508
63 5DXG EST 4.14508
64 4MGB XDH 4.14508
65 5DX3 EST 4.14508
66 5DXE EST 4.14508
67 3NMV PYV 4.14508
68 2J7T 274 4.14508
69 5OLK DTP 4.14508
70 1K7L 544 4.14508
71 1G2N EPH 4.14508
72 2P54 735 4.14508
73 2R40 EPH 4.14508
74 4MGA 27L 4.14508
75 3ET1 ET1 4.14508
76 5LGA 6VH 4.14508
77 3SP6 IL2 4.14508
78 2EV1 OLA 4.14508
79 4TV1 36M 4.14508
80 2Y31 SMQ 4.14508
81 3EYK EYK 4.14508
82 4MG9 27K 4.14508
83 3R35 4CO 4.63576
84 4QWT ACD 4.66321
85 4QOM PYG 4.66321
86 1ZDT PEF 4.66321
87 1XQP 8HG 4.66321
88 1N83 CLR 4.66321
89 1YUC EPH 4.66321
90 5B4B LP5 4.66321
91 1E3W NAD 4.66321
92 4PLG OXM 4.66321
93 4PLG NAI 4.66321
94 4PLT NAI 4.66321
95 4PLT OXM 4.66321
96 2P1C GG3 4.66321
97 4P6X HCY 4.66321
98 2IMP LAC 4.66321
99 1CMC SAM 4.80769
100 2WCJ M21 4.96454
101 3HRD FAD 5.18135
102 4CVZ TYR GLU LEU ASP GLU LYS PHE ASP ARG LEU 5.18135
103 1YMT DR9 5.18135
104 5Y24 GLY MET PRO ARG GLY ALA 5.18135
105 2HJR APR 5.18135
106 2W8Q SIN 5.33881
107 1DB1 VDX 5.69948
108 3VRV YSD 5.69948
109 3KMZ EQO 5.69948
110 5JE0 AZ8 5.69948
111 5JE0 SAH 5.69948
112 1ZPD CIT 5.69948
113 5WL1 CUY 6.06061
114 5WL1 D3D 6.06061
115 2OFV 242 6.21762
116 5B25 4QJ 6.73575
117 4POJ 2VP 6.73575
118 4M8E 29V 6.73575
119 2CNE DFJ 6.73575
120 2IV2 MGD 6.73575
121 1FM9 570 6.73575
122 1FM9 9CR 6.73575
123 4EOX 0S5 7.25389
124 1TMX HGX 7.25389
125 4A2A ATP 7.25389
126 4A2B AGS 7.25389
127 3QLM PLM 7.25806
128 4CCW VKC 7.77202
129 4Y30 49L 7.77202
130 4Y30 SAH 7.77202
131 3SCM LGN 7.77202
132 4GFD 0YB 7.77202
133 1ZBQ NAD 7.77202
134 1KJM ALA GLN PHE SER ALA SER ALA SER ARG 8
135 1SIV PSI 8.08081
136 3GWT 066 8.29016
137 5LX9 OLB 8.29016
138 5KKB BMA NAG MAN MAN MAN MAN MAN MAN MAN 8.29016
139 4K4D HFQ 8.75912
140 1SR7 MOF 8.80829
141 3QUZ QUV 8.80829
142 3G08 FEE 8.80829
143 1OLM VTQ 8.80829
144 1O6U PLM 8.80829
145 4OAR 2S0 8.80829
146 5U97 PIT 8.80829
147 3P9T TCL 8.80829
148 1MHC FME TYR PHE ILE ASN ILE LEU THR LEU 8.80829
149 2O5L MNR 9.15033
150 5C1M OLC 9.32642
151 6BJ3 ILE PRO LEU THR GLU GLU ALA GLU LEU 9.32642
152 4O4Z N2O 9.74026
153 5C2H 4PX 9.84456
154 3IPQ 965 9.84456
155 3FAL LO2 9.84456
156 5C2H 4XU 9.84456
157 2HJ9 AI2 9.84456
158 1D1G MTX 10.119
159 3WSJ MK1 10.3448
160 5WGC AFY 10.3627
161 3GN8 DEX 10.3627
162 5UC1 486 10.3627
163 4LSJ LSJ 10.3627
164 4E2J MOF 10.3627
165 1M2Z DEX 10.3627
166 6G5J EM8 10.9091
167 1S17 GNR 11.1111
168 4C2C ALA VAL PRO ALA 11.399
169 4HBM 0Y7 11.6667
170 6DIO CIT 11.9171
171 2E2R 2OH 11.9171
172 2D5X L35 12.0567
173 3NIM ARG ARG ALA ALA 12.1951
174 1LRI CLR 12.2449
175 4K49 HFQ 12.5
176 3CX5 SMA 13.3858
177 3OLL EST 13.9896
178 1U3R 338 13.9896
179 1YYE 196 13.9896
180 4NKW PLO 13.9896
181 2YJD YJD 14.5078
182 4J24 EST 14.5078
183 4OAS 2SW 14.5833
184 5OWC AYZ 14.7541
185 5Z84 CHD 14.8936
186 5Z84 TGL 14.8936
187 5ZCO TGL 14.8936
188 3VZ3 SSN 15.0259
189 1N4H REA 15.0259
190 3RUU 37G 15.544
191 3DCT 064 15.544
192 3BEJ MUF 15.544
193 4OGQ 7PH 17.2414
194 5W7B PA1 PO4 FTT FTT GCS FTT PO4 KDO MYR 19.171
195 4J26 EST 50
Pocket No.: 2; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3njq.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 3njq.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 3njq.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: 137
This union binding pocket(no: 5) in the query (biounit: 3njq.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
1 1UVC STE None
2 5BVT PAM None
3 1FK5 OLA None
4 1XZ3 ICF None
5 5HZ5 65X None
6 5ICE 2H4 1.5544
7 4O4K 2PK 1.5544
8 4R6W SAH 1.5544
9 6FBA D48 1.5544
10 1R5L VIV 2.07254
11 1HG4 LPP 2.07254
12 5DY5 5GR 2.59067
13 4OKZ 3E9 2.59067
14 1SMR PIV HIS PRO PHE HIS LPL TYR TYR SER 2.59067
15 4PGK Y69 2.59067
16 1GQG DCD 2.59067
17 5N87 N66 2.59067
18 3HLX PQQ 2.59067
19 5LS7 ACO 2.91971
20 3RY9 1CA 3.10881
21 3RO7 TDR 3.10881
22 1RQJ RIS 3.10881
23 4XF6 ADP 3.10881
24 3ROE THM 3.10881
25 1XVB BHL 3.10881
26 2LBD REA 3.10881
27 3TGE TGE 3.10881
28 5IM3 DTP 3.10881
29 5NTP 98E 3.62694
30 2Q1H AS4 3.62694
31 4V24 GYR 3.62694
32 5FM0 WAQ 3.62694
33 4IQY AR6 3.62694
34 4E90 7RG 3.62694
35 4QJR PIZ 3.67347
36 2QE4 JJ3 4.14508
37 2BJ4 OHT 4.14508
38 3UUA 0CZ 4.14508
39 4TUZ 36J 4.14508
40 4Q9M FPP 4.14508
41 2QA8 GEN 4.14508
42 4Q9M 2ZW 4.14508
43 1T0S BML 4.14508
44 2UXI G50 4.14508
45 5XK9 GST 4.14508
46 4LOC BTN 4.14508
47 1W2Y DUN 4.14508
48 6C28 WCA 4.30108
49 2QM9 TDZ 4.51613
50 3WBG 2AN 4.57516
51 1XAP TTB 4.66321
52 4DM8 REA 4.66321
53 1T26 GBD 4.66321
54 1T26 NAI 4.66321
55 1SO2 666 4.66321
56 4P6W MOF 4.66321
57 1Q7E MET 4.66321
58 2WL5 COA 4.66321
59 1GZ4 FUM 4.66321
60 1QV1 CZH 4.66321
61 3RUV ANP 5.18135
62 1ZT1 PHE GLU ALA ASN GLY ASN LEU ILE 5.18135
63 5HZ9 5M8 5.18518
64 5K13 6Q7 5.69948
65 1N1G BCP 5.69948
66 2Z77 HE7 5.7554
67 5U98 1KX 6.06061
68 6C1R EFD 6.21762
69 3SFI 3SF 6.21762
70 5UWA 8ND 6.21762
71 4EI7 GDP 6.21762
72 4NB5 2JT 6.43275
73 3H0A 9RA 6.73575
74 1RDT L79 6.73575
75 2YOO K2B 6.73575
76 2Q6B HR2 6.73575
77 3G58 988 6.73575
78 1XON PIL 6.73575
79 2WKV COA 6.73575
80 2WKT COA 6.73575
81 1HBK COA 6.74157
82 3R1V AZB 7.08661
83 1DKF BMS 7.25389
84 4GV4 MEJ 7.25389
85 1DKF OLA 7.25389
86 3WOL VAL TYR 7.77202
87 4I4B NAD 7.77202
88 5HWO HMG 7.77202
89 2AX9 BHM 8.29016
90 5LIA 6XN 8.29016
91 3V49 PK0 8.29016
92 5OHJ 9VE 8.29016
93 5MEX SZZ 8.80829
94 4DP3 MMV 8.80829
95 4XB4 45D 8.80829
96 6FFI D8B 9.32642
97 2IYA ZIO 9.32642
98 3FAL REA 9.84456
99 3HX3 RET 9.84456
100 5UFS 1TA 10.3627
101 1NHZ 486 10.3627
102 3BQD DAY 10.3627
103 1NP7 FAD 10.3627
104 5X80 SAL 10.625
105 3RGA ILD 10.8808
106 5IKH 6BW 10.8808
107 3EWC MCF 11.399
108 2C42 TPP 11.399
109 2C42 PYR 11.399
110 3LDW ZOL 12.4352
111 3LDW IPE 12.4352
112 2ZCQ B65 12.4352
113 4X6X S74 12.9534
114 2Y69 CHD 14.2857
115 1TW4 CHD 14.4
116 2DYS PSC 14.8936
117 5ZCO PSC 14.8936
118 5Z84 PSC 14.8936
119 2DYR PSC 14.8936
120 5Z84 PGV 14.8936
121 2DYS TGL 14.8936
122 2DYR PGV 14.8936
123 5ZCO PGV 14.8936
124 2DYS PGV 14.8936
125 2DYR TGL 14.8936
126 5ZCO CHD 14.8936
127 6A5Y 9CR 15.0259
128 6CR2 LFV 15.0259
129 3OKI OKI 15.544
130 2I0G I0G 16.5803
131 3LN0 52B 17.0984
132 5F2T PLM 17.6166
133 3HDY FDA 18.6528
134 3HDY FAD 18.6528
135 3HDY GDU 18.6528
136 6C7D EOJ 18.6528
137 2FYU FDN 26.9231
Pocket No.: 6; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 3njq.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 3njq.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 3njq.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: 42
This union binding pocket(no: 9) in the query (biounit: 3njq.bio2) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 2BME GNP None
2 1U8Z GDP None
3 1YZN GNP None
4 6BSX E7S None
5 6BSX GDP None
6 3Q72 GNP None
7 1OIX GDP None
8 5K9B FMN 1.11111
9 5HCN GCP 1.5544
10 2IO8 ADP 2.59067
11 2QE0 NAP 2.59067
12 6AU6 GDP 2.59067
13 1YVD GNP 2.95858
14 1R4A GNP 3.0303
15 4Q6R 30J 3.62694
16 1Z0A GDP 4.02299
17 1R2Q GNP 4.11765
18 3C1M ANP 4.14508
19 1SVI GDP 4.14508
20 1TQ4 GDP 4.66321
21 2XTZ GSP 4.66321
22 6ALW BNV 4.66321
23 6ALW BMJ 4.66321
24 4MZQ 1VU 4.86111
25 1WF3 GNP 5.18135
26 1ZC3 GNP 5.30973
27 1KSH GDP 5.37634
28 5O74 GDP 5.55556
29 2HF9 GSP 5.69948
30 1G51 AMO 6.21762
31 4K81 GTP 6.43275
32 1ELU PDA 7.25389
33 1ELU CSS 7.25389
34 2RCN GDP 7.25389
35 5VN0 FAD 7.25389
36 1EZ0 NAP 7.77202
37 3BC1 GNP 8.47458
38 1Z0J GTP 8.47458
39 5L9Z GUX 9.09091
40 1T3Q FAD 11.9171
41 3RWO GDP 14.0541
42 1TU3 GNP 17.7215
Pocket No.: 10; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 3njq.bio2) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 11; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 3njq.bio2) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 3njq.bio2) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 13; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 13) in the query (biounit: 3njq.bio3) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 14; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 14) in the query (biounit: 3njq.bio3) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 15; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 15) in the query (biounit: 3njq.bio3) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 16; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 16) in the query (biounit: 3njq.bio3) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 17; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: 26
This union binding pocket(no: 17) in the query (biounit: 3njq.bio3) has 5 residues
No: Leader PDB Ligand Sequence Similarity
1 1RL4 BL5 1.59574
2 5TWB FAD 2.07254
3 5VRH PLM 2.59067
4 5YVR NDP 3.10881
5 2W41 ADP 3.10881
6 3G5N PB2 3.62694
7 1EU1 MGD 3.62694
8 1DMR PGD 3.62694
9 2WM4 VGJ 3.62694
10 6G09 BXP 4.14508
11 4JD3 COA 4.66321
12 4JD3 PLM 4.66321
13 5EHZ 5NZ 5.18135
14 2OWZ CIT 5.18135
15 1M48 FRG 5.26316
16 1H12 XYS 5.69948
17 1H12 XYP 5.69948
18 2ZR9 DTP 8.29016
19 1VDC FAD 9.32642
20 4COL DTP 10.3627
21 2D5Z L35 11.3475
22 3A51 VDY 11.399
23 1TDF NAP 12.9534
24 1TDF FAD 12.9534
25 4ELG 52J 15.0602
26 2XD9 XD9 20.9581
Pocket No.: 18; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 18) in the query (biounit: 3njq.bio3) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 19; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 19) in the query (biounit: 3njq.bio3) has 5 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 20; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 20) in the query (biounit: 3njq.bio3) has 5 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 21; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 21) in the query (biounit: 3njq.bio3) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 22; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 22) in the query (biounit: 3njq.bio3) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 23; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 23) in the query (biounit: 3njq.bio3) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 24; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 24) in the query (biounit: 3njq.bio3) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 25; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: 13
This union binding pocket(no: 25) in the query (biounit: 3njq.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 2XDQ MGX 2.59067
2 3EW2 BTN 2.96296
3 2VHW NAI 3.10881
4 1UHK CZN 3.14136
5 1EU1 GLC 3.62694
6 3PVT 3HC 4.14508
7 3CH6 311 4.66321
8 3CH6 NAP 4.66321
9 6D5H FV7 6.58683
10 6D59 FVJ 6.58683
11 6D5L FW7 6.58683
12 1YRO UDP 7.31707
13 1S20 TLA 11.9171
Pocket No.: 26; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: 23
This union binding pocket(no: 26) in the query (biounit: 3njq.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 2NNQ T4B None
2 3EM0 CHD 3.62319
3 2XMY CDK 3.62694
4 5X8Q 82R 3.62694
5 1OE0 TTP 4.14508
6 2VQ5 HBA 4.14508
7 4OHU 2TK 4.14508
8 4OHU NAD 4.14508
9 2YBQ UP2 4.66321
10 3HYW DCQ 5.18135
11 2UW1 GVM 5.18135
12 5GVL GI8 5.18135
13 5GVL PLG 5.18135
14 2Z77 NCA 5.7554
15 4URX FK1 5.94595
16 2BP1 FLC 6.21762
17 6BVM EBV 6.58683
18 6BVK EAV 6.58683
19 3FVU IAC 7.77202
20 6CB2 OLC 8.29016
21 3T3Z 9PL 8.80829
22 3QFJ LEU LEU PHE GLY PHE PRO VAL TYR VAL 8.80829
23 1DTL BEP 27.3292
Pocket No.: 27; Query (leader) PDB : 3NJQ; Ligand: NJQ; Similar sites found with APoc: 38
This union binding pocket(no: 27) in the query (biounit: 3njq.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
1 2V1O COA None
2 1VLH PNS None
3 6FE1 V14 2.07254
4 1XG5 NAP 2.07254
5 3W2E NAD 3.10881
6 3W2E FAD 3.10881
7 4ER2 IVA VAL VAL STA ALA STA 3.62694
8 5UAV TFB 3.62694
9 2WXD E18 3.62694
10 4C4A SAH 3.62694
11 3OJI PYV 3.7037
12 6GAR FAD 4.14508
13 6GEW SFG 4.14508
14 6GEW SAH 4.14508
15 1QIN GIP 4.37158
16 2XCG XCG 4.66321
17 5GUD NDP 5.18135
18 5GUD 2IT 5.18135
19 4CE5 PDG 6.73575
20 4AT3 LTI 6.73575
21 1KUV CA5 6.73575
22 3NVD OAN 7.25389
23 1ZP9 ATP 7.25389
24 1I00 UMP 7.77202
25 1I00 D16 7.77202
26 1BXG NAD 7.77202
27 1C1X NAD 8.29016
28 5FKP 6UL 8.80829
29 4OJ8 2TQ 8.80829
30 6A8H AHR AHR AHR 10.8808
31 1MH5 HAL 10.8808
32 2XG9 NOJ GLC 12.4352
33 4LS7 1X9 16.0622
34 3B8X G4M 16.0622
35 3RI1 3RH 17.6166
36 3E5A VX6 18.1818
37 3FAP ARD 18.6916
38 3WDM ADN 27.4611
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