Receptor
PDB id Resolution Class Description Source Keywords
3NKV 1.7 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF RAB1B COVALENTLY MODIFIED WITH AMP AT Y HOMO SAPIENS POSTTRANSLATIONAL MODIFICATION AMPYLATION ADENYLYLATION RVESICULAR TRANSPORT PROTEIN TRANSPORT
Ref.: THE LEGIONELLA EFFECTOR PROTEIN DRRA AMPYLATES THE TRAFFIC REGULATOR RAB1B. SCIENCE V. 329 946 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
AMP A:600;
B:600;
Part of Protein;
Part of Protein;
none;
none;
submit data
347.221 C10 H14 N5 O7 P c1nc(...
BA A:175;
B:175;
Part of Protein;
Part of Protein;
none;
none;
submit data
137.327 Ba [Ba+2...
GNP A:400;
B:400;
Valid;
Valid;
none;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG A:500;
B:500;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3NKV 1.7 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF RAB1B COVALENTLY MODIFIED WITH AMP AT Y HOMO SAPIENS POSTTRANSLATIONAL MODIFICATION AMPYLATION ADENYLYLATION RVESICULAR TRANSPORT PROTEIN TRANSPORT
Ref.: THE LEGIONELLA EFFECTOR PROTEIN DRRA AMPYLATES THE TRAFFIC REGULATOR RAB1B. SCIENCE V. 329 946 2010
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (12)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 14 families.
1 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
9 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (246)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
19 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
27 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
36 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
40 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
41 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
45 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
47 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
49 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
57 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
61 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
78 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
81 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
84 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
85 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
87 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
88 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
91 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
92 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
93 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
94 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
97 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
99 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
101 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
102 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
104 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
109 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
112 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
114 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
118 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
124 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
126 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
127 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
130 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
133 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
134 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
135 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
138 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
140 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
145 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
150 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
151 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
152 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
153 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
154 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
155 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
156 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
157 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
158 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
163 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
164 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
165 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
168 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 1N6K - GDP AF3 n/a n/a
170 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
171 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
172 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
174 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
175 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
178 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
179 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
181 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
183 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
185 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
186 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
187 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
188 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
189 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
190 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
191 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
192 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
193 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
194 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
197 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
201 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
203 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
207 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
208 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
209 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
210 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
211 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
214 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
215 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
216 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
221 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
225 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
227 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
228 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
229 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
230 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
231 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
232 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
234 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
235 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
236 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
237 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
238 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
239 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
241 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
242 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
243 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
244 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
245 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 GDP 0.839506 0.973684
3 GP3 0.82716 0.948718
4 GTP 0.809524 0.973684
5 GNH 0.807229 0.986842
6 G1R 0.77907 0.961039
7 GCP 0.77907 0.948718
8 GSP 0.770115 0.925
9 5GP 0.756098 0.960526
10 G 0.756098 0.960526
11 G2R 0.747253 0.936709
12 GMV 0.747126 0.948718
13 GAV 0.714286 0.936709
14 GP2 0.712644 0.936709
15 G2P 0.711111 0.936709
16 Y9Z 0.708333 0.880952
17 GDP MG 0.696629 0.9
18 GDD 0.690722 0.936709
19 GDC 0.690722 0.936709
20 GKE 0.690722 0.936709
21 GDP BEF 0.688889 0.878049
22 G5P 0.686869 0.948718
23 GPG 0.684211 0.936709
24 GTG 0.683673 0.91358
25 GFB 0.683673 0.936709
26 GDR 0.683673 0.936709
27 JB2 0.68 0.936709
28 GKD 0.68 0.936709
29 G3A 0.676768 0.948718
30 6CK 0.676768 0.91358
31 GDX 0.673267 0.948718
32 ALF 5GP 0.67033 0.86747
33 GTP MG 0.666667 0.9
34 BEF GDP 0.666667 0.86747
35 YGP 0.663265 0.879518
36 GCP G 0.659574 0.911392
37 GPD 0.656863 0.902439
38 GDP AF3 0.645833 0.86747
39 GDP ALF 0.645833 0.86747
40 JB3 0.641509 0.925
41 DBG 0.640351 0.974359
42 G3D 0.638298 0.960526
43 G4P 0.625 0.960526
44 GMP 0.621951 0.857143
45 NGD 0.62037 0.936709
46 GGM 0.618182 0.925926
47 0O2 0.616162 0.960526
48 G G 0.61 0.911392
49 2MD 0.603604 0.870588
50 CAG 0.60177 0.904762
51 U2G 0.590909 0.91358
52 FEG 0.590909 0.858824
53 GDP 7MG 0.590476 0.888889
54 MGD 0.587719 0.870588
55 ZGP 0.585586 0.848837
56 CG2 0.580357 0.91358
57 ANP 0.568421 0.922078
58 PGD 0.567797 0.902439
59 MD1 0.567797 0.870588
60 3GP 0.56044 0.922078
61 TPG 0.558333 0.822222
62 GH3 0.55 0.948052
63 FE9 0.546219 0.778947
64 GPX 0.539216 0.922078
65 G4M 0.539062 0.860465
66 DGI 0.536082 0.9
67 BGO 0.535088 0.901235
68 IDP 0.53125 0.947368
69 DGT 0.53 0.9
70 2GP 0.526882 0.935065
71 G1R G1R 0.520325 0.901235
72 I2C FE2 CMO CMO 0.516667 0.811111
73 U A G G 0.512605 0.911392
74 AGO 0.504202 0.91358
75 G A A A 0.504202 0.9
76 P2G 0.5 0.860759
77 G1G 0.5 0.902439
78 MGP 0.49505 0.936709
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 DGP 0.474227 0.8875
83 DG 0.474227 0.8875
84 G G U 0.473684 0.911392
85 IMP 0.463918 0.934211
86 G2Q 0.462963 0.936709
87 GPC 0.459677 0.858824
88 G C 0.459016 0.878049
89 GTA 0.448276 0.91358
90 G7M 0.444444 0.924051
91 MAP 0.439252 0.898734
92 G G G RPC 0.435484 0.853659
93 B4P 0.434343 0.871795
94 AP5 0.434343 0.871795
95 ADP 0.434343 0.896104
96 A2D 0.43299 0.871795
97 U G A 0.431655 0.86747
98 G G G C 0.426357 0.890244
99 SGP 0.425743 0.807229
100 AU1 0.425743 0.922078
101 BA3 0.424242 0.871795
102 35G 0.423077 0.909091
103 PCG 0.423077 0.909091
104 A G C C 0.423077 0.888889
105 C2E 0.423077 0.897436
106 APC G U 0.421875 0.864198
107 ATP 0.421569 0.896104
108 ACQ 0.419048 0.873418
109 5GP 5GP 0.419048 0.860759
110 AQP 0.417476 0.896104
111 5FA 0.417476 0.896104
112 01G 0.417391 0.880952
113 UNP 0.415842 0.810127
114 AN2 0.415842 0.909091
115 6AD 0.415094 0.821429
116 ITT 0.411765 0.846154
117 M33 0.411765 0.860759
118 G C C C 0.410448 0.901235
119 G U34 0.408 0.86747
120 ACP 0.407767 0.873418
121 APR 0.403846 0.871795
122 AR6 0.403846 0.871795
123 DG DG 0.403509 0.845238
124 A4P 0.403226 0.848837
125 UCG 0.402985 0.888889
126 AD9 0.4 0.873418
127 SAP 0.4 0.851852
128 AGS 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3NKV; Ligand: GNP; Similar sites found: 342
This union binding pocket(no: 1) in the query (biounit: 3nkv.bio1) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1GXU 2HP 0.0002449 0.48846 None
2 1PTR PRB 0.005346 0.45268 None
3 1NJF AGS 0.0001507 0.44493 None
4 1NJF ADP 0.00009809 0.43911 None
5 2RGX AP5 0.003498 0.42477 None
6 1ION ADP 0.00008114 0.42434 None
7 1PZM 5GP 0.02868 0.40122 None
8 1U2Z SAH 0.003303 0.40373 1.14286
9 2GDJ ANP 0.0001556 0.50967 1.71429
10 2Y65 ADP 0.000001236 0.4166 1.71429
11 2GWH A3P 0.006283 0.41429 1.71429
12 2PL3 ADP 0.0001371 0.51909 2.28571
13 3BER AMP 0.005656 0.43252 2.28571
14 4D81 ADP 0.0001024 0.42341 2.28571
15 2NCD ADP 0.000001864 0.63092 2.85714
16 4R43 GDP 0.0001164 0.5159 2.85714
17 3KJI ADP 0.00003094 0.44914 2.85714
18 3H86 AP5 0.0008815 0.44183 2.85714
19 1W5T ANP 0.001724 0.4318 2.85714
20 1W5T ADP 0.002976 0.42895 2.85714
21 4GOX A3P 0.001676 0.42514 2.85714
22 1G8S MET 0.01506 0.42029 2.85714
23 5LB3 ADP 0.00005271 0.40852 2.85714
24 4AG5 ADP 0.000007978 0.59783 3.42857
25 1FP6 ADP 0.00003938 0.51953 3.42857
26 3ZQ6 ADP ALF 0.00004094 0.48503 3.42857
27 3FWY ADP 0.000009371 0.46833 3.42857
28 1YTM ATP 0.000323 0.46326 3.42857
29 2OFW ADX 0.0006948 0.45123 3.42857
30 2PEZ GGZ 0.0007061 0.44306 3.42857
31 2PEZ DAT 0.0007061 0.44306 3.42857
32 3VM7 GLC 0.01245 0.43238 3.42857
33 1P4V GLY 0.01387 0.42294 3.42857
34 2ZPA ADP 0.0003205 0.41904 3.42857
35 1X6V ADP 0.0006545 0.41687 3.42857
36 3QXC ATP 0.001385 0.41624 3.42857
37 1UKZ ADP 0.00733 0.40236 3.42857
38 4WOP CTP 0.00002275 0.46934 3.55556
39 4NCN GTP 0.000000000006975 0.72961 4
40 4LPS GDP 0.00000009506 0.65846 4
41 2ZFI ADP 0.000001585 0.60808 4
42 1D2E GDP 0.00000001788 0.55104 4
43 1B0U ATP 0.0005449 0.46694 4
44 1IN4 ADP 0.0002783 0.42116 4
45 2WIC GNP 0.00000002158 0.68952 4.57143
46 1JJ7 ADP 0.000001506 0.65411 4.57143
47 1G7C 5GP 0.0000003782 0.63883 4.57143
48 2ZR9 DTP 0.0001778 0.50681 4.57143
49 1G6O ADP 0.000128 0.50157 4.57143
50 1FNN ADP 0.0002419 0.4733 4.57143
51 2Q2Y ADP 0.0003166 0.46688 4.57143
52 2Q2Y MKR 0.0003229 0.46528 4.57143
53 1QAN SAH 0.0006771 0.42585 4.57143
54 2IXE ATP 0.0004813 0.42464 4.57143
55 3FB4 AP5 0.00366 0.42184 4.57143
56 3P4X ADP 0.00002151 0.41818 4.57143
57 3FYH ADP 0.002901 0.41203 4.57143
58 4TTQ ATP 0.0002018 0.40125 4.57143
59 1ME8 RVP 0.01002 0.4012 4.57143
60 2IYL GDP 0.000003716 0.5898 4.57746
61 1BO4 COA 0.01867 0.40676 4.7619
62 2X7I CIT 0.006047 0.43108 4.87013
63 1WF3 GNP 0.0000000009924 0.67071 5.14286
64 4WZ6 ATP 0.00001272 0.58734 5.14286
65 1JI0 ATP 0.0000285 0.5617 5.14286
66 3B5J 12D 0.00004063 0.55369 5.14286
67 4IDN GNP 0.00003976 0.49753 5.14286
68 2C04 GCP 0.0001306 0.49019 5.14286
69 2WOJ ADP ALF 0.00005998 0.47836 5.14286
70 3ZS9 ADP ALF 0.00004499 0.47409 5.14286
71 3KTA AP5 0.0004738 0.46974 5.14286
72 3E70 GDP 0.000006491 0.45578 5.14286
73 4XVU ATP 0.000117 0.45486 5.14286
74 3UIE ANP 0.00002448 0.4359 5.14286
75 4IOK ADP 0.001167 0.42812 5.14286
76 4IOK XPO 0.0008525 0.42607 5.14286
77 3BFX A3P 0.004003 0.41946 5.14286
78 2JLR ANP 0.0001525 0.41857 5.14286
79 5GJC ATP 0.00004723 0.4128 5.14286
80 1XKV ATP 0.0001588 0.41237 5.14286
81 1QF9 C5P 0.008293 0.40358 5.14286
82 1QF9 ALF 0.008293 0.40358 5.14286
83 1QF9 ADP 0.008293 0.40358 5.14286
84 4LC1 GDP 0.000000002075 0.75051 5.71429
85 4RD0 GDP 0.000000000009944 0.71216 5.71429
86 2RCN GDP 0.00000000001548 0.60535 5.71429
87 5BQ5 ADP BEF 0.00009199 0.50834 5.71429
88 2B8W ALF 5GP 0.000007661 0.5062 5.71429
89 1F5N GNP 0.000007216 0.50479 5.71429
90 1JWY GDP 0.000001085 0.50037 5.71429
91 1Z6T ADP 0.0001518 0.48724 5.71429
92 4IEE AGS 0.0007578 0.48146 5.71429
93 3DZD ADP 0.0003272 0.47715 5.71429
94 5N69 ADP 0.000002253 0.47641 5.71429
95 1JWY ADP 0.000001762 0.46276 5.71429
96 4YS0 ADP 0.0008555 0.45338 5.71429
97 2FAH GDP 0.00008815 0.43279 5.71429
98 5I34 GDP 0.0000782 0.42239 5.71429
99 4O48 ASP 0.01643 0.42025 5.71429
100 3A4M ADP 0.0000059 0.41852 5.71429
101 1NHX FTB 0.005822 0.41724 5.71429
102 1NHX PEP 0.005914 0.416 5.71429
103 1KO8 6PG 0.0004677 0.41346 5.71429
104 4FCW ADP 0.0002214 0.40588 5.71429
105 2GMV UN8 0.00535 0.40133 5.71429
106 4QM7 GTP 0.00003429 0.41563 5.84795
107 1TAD GDP 0.000000003992 0.65182 6.28571
108 1TAD ALF 0.000000003992 0.65182 6.28571
109 1SVK ALF GDP 0.000000005081 0.65013 6.28571
110 1BH2 GSP 0.00000000508 0.64757 6.28571
111 1G6H ADP 0.000002341 0.64221 6.28571
112 3DEF GDP 0.000001226 0.58896 6.28571
113 4HI0 GDP 0.0000007829 0.57637 6.28571
114 2XTN GTP 0.0000004001 0.57568 6.28571
115 4P4T GDP 0.000001384 0.57228 6.28571
116 1Y3A GDP 0.0000002591 0.55913 6.28571
117 5KDO GDP 0.000003044 0.55086 6.28571
118 2OM2 GDP 0.000003512 0.54818 6.28571
119 3TK1 GDP 0.000000000325 0.54299 6.28571
120 1GP2 GDP 0.000003521 0.53643 6.28571
121 1GOT GDP 0.000001687 0.52147 6.28571
122 4QOS ADP 0.0002098 0.49146 6.28571
123 1IWE IMP 0.0006813 0.49068 6.28571
124 3FVQ ATP 0.0001696 0.47536 6.28571
125 3DC4 ADP 0.0000003673 0.45487 6.28571
126 1K6M AGS 0.0007556 0.43952 6.28571
127 3QKT ANP 0.0008366 0.42574 6.28571
128 4KFU ACP 0.0000133 0.40616 6.28571
129 2VF7 ADP 0.0001196 0.40455 6.28571
130 1UJ2 C5P 0.004326 0.40357 6.28571
131 1UJ2 ADP 0.004394 0.4033 6.28571
132 1B7T ADP 0.000005685 0.56531 6.41026
133 1SKQ GDP 0.00000001009 0.72842 6.85714
134 1CS4 GSP 0.000000002411 0.62989 6.85714
135 1AZT GSP 0.000000001574 0.62629 6.85714
136 1MKY GDP 0.0000000001106 0.5795 6.85714
137 5FG3 GDP 0.00000000009717 0.56915 6.85714
138 4HSE ADP 0.00002762 0.53966 6.85714
139 1G3Q ADP 0.00004806 0.52806 6.85714
140 1SQ5 ADP 0.00008543 0.516 6.85714
141 5L3S GNP 0.00001176 0.49889 6.85714
142 5L3V GDP 0.00000375 0.46965 6.85714
143 5L3W GDP 0.000006991 0.46135 6.85714
144 1M7G ADX 0.000497 0.44786 6.85714
145 2BIF SIN 0.001125 0.44686 6.85714
146 2BIF ANP 0.0006555 0.44581 6.85714
147 1M7G ADP 0.0006524 0.43995 6.85714
148 1M7G AV2 0.000005678 0.43208 6.85714
149 1R6B ADP 0.00005813 0.42188 6.85714
150 5X40 ACP 0.000853 0.4204 6.85714
151 4YMU ATP 0.00002561 0.40838 6.85714
152 1OXV ANP 0.00002434 0.40759 6.85714
153 1KK8 BEF ADP 0.000001005 0.58549 7.19424
154 2WJH GDP 0.000000005587 0.55572 7.22892
155 2WJH FLC 0.0000008418 0.49107 7.22892
156 1F2U ATP 0.001147 0.42679 7.38255
157 2AWN ADP 0.0000001587 0.71614 7.42857
158 2XT3 ADP 0.0000003294 0.67922 7.42857
159 2W58 ADP 0.0000006329 0.67629 7.42857
160 3CX8 GSP 0.000000001814 0.62344 7.42857
161 1PUJ GNP 0.000000002516 0.58255 7.42857
162 4NON GDP 0.00000006974 0.57162 7.42857
163 1SVI GDP 0.00000000007984 0.56994 7.42857
164 3AB3 GDP 0.00000007417 0.56456 7.42857
165 5M04 GDP 0.000000001328 0.54471 7.42857
166 2QEN ADP 0.00007336 0.43858 7.42857
167 4U60 SIA GAL NGA 0.006696 0.43682 7.42857
168 4U60 SIA 0.006188 0.4361 7.42857
169 3H4S ADP 0.0000003663 0.42846 7.42857
170 4FRZ ADP 0.000001433 0.42797 7.42857
171 3RC3 ANP 0.009559 0.4256 7.42857
172 1CR1 TTP 0.0004219 0.42113 7.42857
173 4U60 SIA GAL BGC NGA GAL 0.02129 0.40786 7.42857
174 5TP0 BRN 0.02983 0.4052 7.42857
175 2XAU ADP 0.0003043 0.40269 7.42857
176 1QHH ATP 0.01753 0.4043 7.69231
177 2C78 GNP 0.00000000006909 0.74167 8
178 2WJG GDP 0.000000009243 0.71846 8
179 1G7S GDP 0.000000005439 0.71839 8
180 2C77 GNP 0.00000000009239 0.66654 8
181 3NHB ADP 0.00000829 0.5973 8
182 1G41 ADP 0.00005872 0.51752 8
183 2CHG ANP 0.0002259 0.47946 8
184 3COB ADP 0.0000002798 0.43419 8
185 3IIJ ADP 0.00001141 0.42934 8
186 1OFH ADP 0.00008717 0.42151 8
187 3QOX SAH 0.002449 0.40873 8
188 2BVN GNP 0.00000000006842 0.78495 8.57143
189 1TQ4 GDP 0.00000001314 0.65314 8.57143
190 5I0H ADP BEF 0.00000004007 0.56775 8.57143
191 3MD0 GDP 0.000000001142 0.5414 8.57143
192 1IHU ADP 0.0001155 0.45386 8.57143
193 1IHU AF3 0.00009464 0.45113 8.57143
194 1W0J ADP 0.00007918 0.4293 8.57143
195 4MKG AP5 0.002544 0.42854 8.57143
196 1W0J ADP BEF 0.0002197 0.42681 8.57143
197 1S3G AP5 0.00404 0.42002 8.57143
198 4PX9 ADP 0.00006839 0.40192 8.57143
199 4DCT GDP 0.0000000001148 0.79919 9.14286
200 4ZG4 VO4 ADP 0.0000001255 0.56696 9.14286
201 5CK5 GDP 0.0000000002406 0.56218 9.14286
202 3B7G ANP 0.0002084 0.49732 9.14286
203 1L2T ATP 0.000588 0.44031 9.14286
204 4MKF AP5 0.003721 0.42259 9.14286
205 2CE7 ADP 0.00008824 0.41724 9.14286
206 3R7F CP 0.03381 0.40342 9.14286
207 4PU6 ASP 0.01006 0.42913 9.16031
208 2VB6 ADP BEF 0.000005348 0.50434 9.71429
209 2GK6 ADP 0.0006986 0.48947 9.71429
210 3RLF ANP 0.0001558 0.44858 9.71429
211 2QZ4 ADP 0.00004975 0.42655 9.71429
212 1OS1 ATP 0.001882 0.42124 9.71429
213 1OS1 PYR 0.002072 0.421 9.71429
214 1T5C ADP 0.0000009267 0.40716 9.71429
215 4GBM A3P 0.005119 0.40495 9.71429
216 1D2N ANP 0.001359 0.40466 9.71429
217 1NN5 ANP 0.006339 0.40245 9.71429
218 1WY7 SAH 0.003186 0.40059 9.71429
219 1GOJ ADP 0.00000008605 0.71914 10.2857
220 3WXM GTP 0.0000000002312 0.69303 10.2857
221 2HF9 GSP 0.00000007558 0.63617 10.2857
222 1P9B GDP 0.0002248 0.47956 10.2857
223 1OYY AGS 0.002189 0.45292 10.2857
224 4A4Z ANP 0.002462 0.45039 10.2857
225 1P9B HDA 0.008952 0.43427 10.2857
226 1NY5 ADP 0.0002285 0.41857 10.2857
227 1YRB GDP 0.0000000001751 0.76614 10.8571
228 5HCN GCP 0.0000000003625 0.58337 10.8571
229 2DPY ADP 0.00003424 0.55756 10.8571
230 2ODE ALF GDP 0.000000001749 0.66639 11.3475
231 3EC1 GDP 0.000000003606 0.55455 11.4286
232 3ZFD ANP 0.000000007927 0.55218 11.4286
233 3VX3 ADP 0.0001184 0.48699 11.4286
234 1LVG ADP 0.000001218 0.43767 11.4286
235 1F9V ADP 0.000001102 0.4306 11.4286
236 3BFV ADP 0.00004906 0.4166 11.4286
237 1W7J ADP BEF 0.0000006482 0.59409 11.9205
238 4R98 GNH 0.0000005253 0.48565 12.1771
239 2XTZ GSP 0.0000000004689 0.68074 12.5714
240 1BG2 ADP 0.0000003807 0.41538 12.5714
241 4UOX PUT 0.00905 0.41063 12.5714
242 1V8K ANP 0.0000002038 0.6521 13.7143
243 4WZA ACP 0.00003594 0.52712 13.7143
244 4WZA ADP 0.00003594 0.52712 13.7143
245 3A1S GDP 0.00000001848 0.69276 14.2857
246 4Q1A UDP 0.006913 0.45717 14.2857
247 4Q1A 2XZ 0.006913 0.45717 14.2857
248 5HR5 ADP 0.000397 0.40965 14.2857
249 2OG2 MLI 0.00003985 0.54438 14.8571
250 3B9Q MLI 0.0001048 0.53019 14.8571
251 1FQK ALF 0.000001107 0.64672 14.966
252 1FQK GDP 0.0000001574 0.59252 14.966
253 4CVN ADP 0.000007136 0.59296 15.4286
254 4H1V GNP 0.000002153 0.57058 15.4286
255 4PFO ADP 0.00002358 0.49262 15.4286
256 2VVG ADP 0.00000009501 0.4297 15.4286
257 3ZIA ADP 0.0001099 0.42418 15.873
258 3ZIA ATP 0.00005814 0.41987 15.873
259 1DAR GDP 0.00000003634 0.51888 16
260 1QF5 GDP 0.0004112 0.47187 16
261 1QF5 RPL 0.01239 0.43417 16
262 4XTR ATP 0.0001121 0.45552 16.2162
263 4XTR ADP 0.0001285 0.43706 16.2162
264 5KSZ GCP 0.0000001301 0.5182 17.1429
265 5KSP GDP 0.00000007109 0.51509 17.1429
266 4OI4 ATP 0.001294 0.4298 17.3913
267 5TSH ANP 0.00001394 0.42572 17.7143
268 5H56 TYD 0.002188 0.42003 17.7143
269 5H56 ADP 0.002188 0.42003 17.7143
270 5TSH ADP 0.00001408 0.4073 17.7143
271 3QF7 ANP 0.00262 0.41823 18
272 4BQS ADP 0.00007039 0.52669 18.8571
273 2BEK ATP 0.0001669 0.47113 18.8571
274 4BQS K2Q 0.003874 0.41629 18.8571
275 2V7Q ADP 0.00003855 0.53961 20
276 2V7Q ATP 0.00004755 0.52184 20
277 2CK3 ANP 0.0002134 0.4757 20
278 2CK3 ADP 0.0003816 0.45185 20
279 1ZUI SKM 0.000345 0.46015 20.2381
280 2HCJ GDP 0.0000000001168 0.56491 21.7143
281 1D8T GDP 0.000000000506 0.56235 21.7143
282 4B47 GDP 0.0000000001102 0.82779 22.8571
283 1FQJ ALF 0.0000004493 0.66364 23.8095
284 1FQJ GDP 0.00000007526 0.60584 23.8095
285 3T12 GDP ALF 0.000000004973 0.66295 25.1429
286 5L3R GCP 0.00000175 0.54332 25.1429
287 3T1O GDP 0.0000003425 0.50819 25.1429
288 2KIN ADP 0.0000003253 0.41655 26
289 3PQC GDP 0.00000000587 0.70603 28
290 2C9O ADP 0.0002291 0.46972 29.7143
291 2GJ8 ALF GDP 0.0000000003848 0.67001 30.2326
292 1M2O GNP 0.000000002005 0.65549 30.2857
293 1NRJ GTP 0.0000000004213 0.64474 30.2857
294 1F6B GDP 0.00000002486 0.53126 30.2857
295 2FH5 GTP 0.0000000000008737 0.83377 30.8571
296 4BAS GNP 0.000000002241 0.62623 30.8571
297 2QTV GNP 0.000000001262 0.65468 31.7365
298 1ZD9 GDP 0.00000000002577 0.78109 33.1429
299 1YZG GDP 0.000000005548 0.55031 33.7143
300 4M9Q GNP 0.00000000003535 0.754 34.2857
301 5KUT GDP 0.000000002312 0.55416 34.8571
302 1ZJ6 G3D 0.000000003379 0.72836 35.4286
303 2QN6 GDP 0.0000000002885 0.80663 35.4839
304 1E96 GTP 0.0000000000001494 0.82065 36
305 2A5F GTP 0.0000000005515 0.66874 36
306 1KK1 GNP 0.00000000327 0.53345 36
307 4V0K GDP 0.0000004434 0.56763 36.0947
308 1I4D GDP 0.00000000002075 0.86453 36.5714
309 2W2X GSP 0.0000000000003899 0.75086 36.5714
310 1G4U GDP 0.000000003719 0.68577 36.5714
311 1DS6 GDP 0.00000000002337 0.59697 36.5714
312 1G4U AF3 0.00005698 0.55456 36.5714
313 2FJU GSP 0.0000000000004815 0.74737 37.1429
314 1HE1 GDP 0.0000000005566 0.7125 37.1429
315 1HE1 AF3 0.000008563 0.58885 37.1429
316 1FZQ GDP 0.0000000005151 0.565 37.1429
317 1H65 GDP 0.000006249 0.49675 37.1429
318 3W5J GDP 0.000001715 0.42547 37.1429
319 1KSH GDP 0.00000000001968 0.68867 38.2857
320 1MR3 G3D 0.000000001906 0.56255 38.8571
321 2ZEJ GDP 0.0000003871 0.56647 39.4286
322 1J2J GTP 0.00000000003979 0.74203 41.5663
323 1O3Y GTP 0.0000000001286 0.72085 41.5663
324 1S9D GDP 0.00000001315 0.69989 42.6829
325 1RE0 GDP 0.000000001311 0.54318 42.6829
326 1UPT GTP 0.00000000003367 0.69345 43.8596
327 1R4A GNP 0.00000000002873 0.71865 46.0606
328 3REF GDP 0.0000000002765 0.71614 46.2857
329 1NF3 GNP 0.000000000002968 0.76871 47.4286
330 5IRC GDP 0.000000000213 0.60257 47.4286
331 1GRN GDP 0.00000000001209 0.80732 48
332 1TX4 ALF GDP 0.000000000001645 0.79953 48
333 4DID GDP 0.0000000002361 0.78409 48
334 1GRN AF3 0.00000007265 0.69653 48
335 5HPY GDP 0.00000000002603 0.65937 48
336 2NGR GDP 0.00000000000371 0.63999 48
337 4ITR GDP 0.000000005928 0.58793 48
338 2NGR AF3 0.00000003317 0.48852 48
339 1CXZ GSP 0.0000000000007057 0.75698 48.5714
340 2GCO GNP 0.00000000000781 0.67615 48.5714
341 3T5G GDP 0.00000000006232 0.61795 48.5714
342 2CJW GDP 0.000000000006806 0.87323 49.7143
Pocket No.: 2; Query (leader) PDB : 3NKV; Ligand: GNP; Similar sites found: 33
This union binding pocket(no: 2) in the query (biounit: 3nkv.bio2) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1DCP HBI 0.02438 0.41584 None
2 3GD4 NAD 0.02209 0.41837 2.85714
3 3GD4 FAD 0.01485 0.41837 2.85714
4 3DKP ADP 0.0001066 0.42514 3.42857
5 2POC BG6 0.007124 0.41434 3.42857
6 1T8U UAP SGN IDS SGN 0.01285 0.40668 3.42857
7 3TMK T5A 0.003562 0.41932 4
8 4IHQ ADP 0.0001802 0.40583 4
9 4P32 ADP 0.001562 0.42458 4.57143
10 2QG6 NMN 0.002916 0.42158 4.57143
11 2IS6 ADP 0.0001021 0.42055 4.57143
12 1JJV ATP 0.0000421 0.41733 5.14286
13 2WHX ADP 0.00002435 0.41475 5.14286
14 1XEX ATP 0.001476 0.40545 5.14286
15 2GMV PEP 0.003719 0.41992 5.71429
16 1VHT BA3 0.0006911 0.41229 5.71429
17 4LJ9 ACP 0.0005861 0.40403 5.71429
18 1YQT ADP 0.00001302 0.42077 6.28571
19 5WRJ A3P 0.004141 0.41035 6.28571
20 3TBK ANP 0.0001333 0.4084 6.28571
21 5WRI A3P 0.00445 0.4056 6.28571
22 3CQD ATP 0.016 0.40141 6.28571
23 2HXW FLC 0.0294 0.40023 6.85714
24 4U00 ADP 0.000001084 0.42272 7.42857
25 3BOS CDP 0.000159 0.41427 7.42857
26 2D7D ADP 0.000567 0.40395 7.42857
27 2ZL4 ALA ALA ALA ALA 0.02228 0.40804 8.57143
28 1XP8 AGS 0.0002272 0.40632 9.71429
29 4ZNL BEF ADP 0.0002376 0.41782 10.2857
30 1XMV ADP 0.0001391 0.42516 10.8571
31 2J5V PCA 0.0483 0.40776 10.8571
32 1RRC ADP 0.000006069 0.41535 11.4286
33 4QRH 0O2 0.001392 0.42075 12.5714
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