Receptor
PDB id Resolution Class Description Source Keywords
3NV2 2.34 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF HUMAN GALECTIN-9 C-TERMINAL CRD IN COMP N-ACETYLLACTOSAMINE HOMO SAPIENS SUGAR BINDING SUGAR BINDING PROTEIN
Ref.: X-RAY STRUCTURES OF HUMAN GALECTIN-9 C-TERMINAL DOM COMPLEXES WITH A BIANTENNARY OLIGOSACCHARIDE AND SIALYLLACTOSE J.BIOL.CHEM. V. 285 36969 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GAL NDG A:501;
Valid;
none;
submit data
383.35 n/a O=C(N...
NI A:401;
Part of Protein;
none;
submit data
58.693 Ni [Ni+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3NV3 1.57 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF HUMAN GALECTIN-9 C-TERMINAL CRD IN COMP BIANTENNARY OLIGOSACCHARIDE HOMO SAPIENS SUGAR BINDING SUGAR BINDING PROTEIN
Ref.: X-RAY STRUCTURES OF HUMAN GALECTIN-9 C-TERMINAL DOM COMPLEXES WITH A BIANTENNARY OLIGOSACCHARIDE AND SIALYLLACTOSE J.BIOL.CHEM. V. 285 36969 2010
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 3NV2 - GAL NDG n/a n/a
2 3NV4 - SIA GAL BGC n/a n/a
3 3NV3 - GAL NAG MAN n/a n/a
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 3NV2 - GAL NDG n/a n/a
2 3NV4 - SIA GAL BGC n/a n/a
3 3NV3 - GAL NAG MAN n/a n/a
50% Homology Family (109)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 298 families.
1 5NF9 Kd = 4.7 uM 8VW C22 H32 N2 O12 CC(=O)N[C@....
2 5E8A Kd = 0.034 uM 5KS C28 H30 F2 N6 O8 S c1cc(ccc1c....
3 1A3K - GAL NAG n/a n/a
4 3T1M Kd = 0.91 mM DQT C23 H27 N O7 Cc1ccc(cc1....
5 4LBL Kd = 11 uM BGC SIA GAL n/a n/a
6 2NMN Kd = 260 uM GAL BGC n/a n/a
7 4R9B - LAT C12 H22 O11 C([C@@H]1[....
8 2NN8 Kd = 260 uM LAT C12 H22 O11 C([C@@H]1[....
9 4JC1 Kd = 50 uM TDG C12 H22 O10 S C([C@@H]1[....
10 4R9A - LAT C12 H22 O11 C([C@@H]1[....
11 5EXO - 5SY C19 H22 O9 CC(=O)O[C@....
12 5ODY Kd = 7.5 nM 9SK C30 H28 F5 N3 O11 S c1cc(c(c2c....
13 5E88 Kd = 0.065 uM 5KT C24 H28 N6 O8 S3 c1cscc1c2c....
14 4R9D - LAT C12 H22 O11 C([C@@H]1[....
15 1KJL Kd = 67 uM GAL NAG n/a n/a
16 3T1L Kd = 0.55 mM MQT C17 H22 O8 Cc1ccc(cc1....
17 2XG3 Kd = 18.2 uM UNU GAL NAG n/a n/a
18 4LBJ Kd = 0.39 uM GAL NAG GAL BGC n/a n/a
19 4R9C - LAT C12 H22 O11 C([C@@H]1[....
20 3ZSJ Kd = 231 uM LAT C12 H22 O11 C([C@@H]1[....
21 4LBM Kd = 0.97 uM BGC GAL NAG GAL n/a n/a
22 1KJR Kd = 0.88 uM BEK GAL NAG n/a n/a
23 6EOL Kd = 0.037 uM BKH C20 H16 Cl2 F3 N3 O4 S c1cc(c(cc1....
24 6G0V Kd = 166 uM EGZ C18 H25 N O13 S C1[C@H](NC....
25 3AYE - LAT C12 H22 O11 C([C@@H]1[....
26 6EOG Kd = 1.6 uM BKK C20 H17 Cl F3 N3 O4 S c1cc(cc(c1....
27 5E89 Kd = 0.014 uM TD2 C28 H30 F2 N6 O8 S c1cc(cc(c1....
28 4LBO Kd = 1.7 uM BGC GAL SIA n/a n/a
29 2NMO Kd = 260 uM GAL BGC n/a n/a
30 3AYC Kd = 57 uM GAL NGA GAL BGC SIA n/a n/a
31 4JCK Kd = 4.3 mM 1LL C12 H22 O10 S C([C@@H]1[....
32 5NFA Kd = 5.6 uM 8VQ C24 H36 N2 O12 CC(=O)N[C@....
33 4LBK Kd = 0.32 uM GAL NAG GAL BGC n/a n/a
34 5OAX Kd = 12 nM 9Q5 C30 H30 F3 N3 O11 S c1cc(cc(c1....
35 4RL7 - LAT C12 H22 O11 C([C@@H]1[....
36 3AYD Kd = 65 uM NPO A2G GAL n/a n/a
37 4LBN Kd = 0.65 uM GLC GAL NAG GAL n/a n/a
38 1G86 - NEQ C6 H7 N O2 CCN1C(=O)C....
39 1QKQ - MAN C6 H12 O6 C([C@@H]1[....
40 1HDK - PMB C6 H5 Hg O3 S c1cc(ccc1S....
41 2D6N - GAL NAG n/a n/a
42 2D6M - LBT C12 H22 O11 C([C@@H]1[....
43 2D6O - NAG GAL GAL NAG n/a n/a
44 4XBN Kd = 93 uM GAL NAG n/a n/a
45 5H9R Kd = 0.84 uM TGZ C20 H26 F N3 O9 S c1cc(cc(c1....
46 5H9P Kd = 0.068 uM TD2 C28 H30 F2 N6 O8 S c1cc(cc(c1....
47 5DG2 - GAL GLC n/a n/a
48 5EWS - GAL BGC n/a n/a
49 5NM1 - LBT C12 H22 O11 C([C@@H]1[....
50 5NLD - LBT C12 H22 O11 C([C@@H]1[....
51 5NMJ - LBT C12 H22 O11 C([C@@H]1[....
52 5NLH - LBT C12 H22 O11 C([C@@H]1[....
53 5NLE - LBT C12 H22 O11 C([C@@H]1[....
54 4XBL Kd = 340 uM GAL NAG n/a n/a
55 4Y24 Kd = 0.22 uM TD2 C28 H30 F2 N6 O8 S c1cc(cc(c1....
56 3T2T - MQT C17 H22 O8 Cc1ccc(cc1....
57 3OY8 Kd = 220 uM GAL GCO n/a n/a
58 2EAL - GAL NGA A2G n/a n/a
59 2ZHL Kd = 3 uM NAG GAL GAL NAG n/a n/a
60 2ZHK Kd = 3 uM NAG GAL GAL NAG n/a n/a
61 2ZHN - NAG GAL NAG GAL GAL NAG n/a n/a
62 2ZHM - NAG GAL GAL NAG GAL n/a n/a
63 2EAK - LBT C12 H22 O11 C([C@@H]1[....
64 3WLU - LSE C18 H36 O10 Se Si C[Si](C)(C....
65 5H9S Kd = 87 uM TGZ C20 H26 F N3 O9 S c1cc(cc(c1....
66 5H9Q Kd = 38 uM TD2 C28 H30 F2 N6 O8 S c1cc(cc(c1....
67 4XBQ Kd = 270 uM GAL NAG n/a n/a
68 6A62 - LAT C12 H22 O11 C([C@@H]1[....
69 6A64 - LAT C12 H22 O11 C([C@@H]1[....
70 6A63 - LAT C12 H22 O11 C([C@@H]1[....
71 5T7S Kd = 3.1 uM LBT C12 H22 O11 C([C@@H]1[....
72 4BMB Ka = 13000 M^-1 LAT C12 H22 O11 C([C@@H]1[....
73 5T7I Kd = 0.33 uM LAT NAG GAL n/a n/a
74 3VKO - SIA GAL NAG n/a n/a
75 4BME Ka = 13000 M^-1 LBT C12 H22 O11 C([C@@H]1[....
76 5T7T Kd = 2.1 uM GAL NAG n/a n/a
77 3I8T Kd = 600 uM LBT C12 H22 O11 C([C@@H]1[....
78 3WV6 - GAL BGC n/a n/a
79 3NV2 - GAL NDG n/a n/a
80 3NV4 - SIA GAL BGC n/a n/a
81 3NV3 - GAL NAG MAN n/a n/a
82 3WUD Kd = 41 uM GLC GAL n/a n/a
83 3GAL - 1GN C6 H13 N O5 C([C@@H]1[....
84 4UW6 - VV7 C69 H73 N20 O39 [H]1c2c(cc....
85 2GAL - GAL C6 H12 O6 C([C@@H]1[....
86 4GAL - GAL BGC n/a n/a
87 4UW3 - 50G C31 H50 N10 O18 c1c(nnn1[C....
88 4UW4 - 4S0 C49 H80 N10 O33 c1c(nnn1[C....
89 3ZXE Kd = 450 uM PGZ C22 H28 N O8 P S Cc1ccc(cc1....
90 5GAL - NAG GAL n/a n/a
91 4UW5 - 4S0 C49 H80 N10 O33 c1c(nnn1[C....
92 1A78 - TDG C12 H22 O10 S C([C@@H]1[....
93 5DUW Kd = 510 uM 5GO C12 H22 O14 S C([C@@H]1[....
94 5DUV Kd = 1300 uM LAT C12 H22 O11 C([C@@H]1[....
95 5DUX Kd = 380 uM LAT FUC n/a n/a
96 4WVV - LBT C12 H22 O11 C([C@@H]1[....
97 4WVW - SLT C23 H39 N O19 CC(=O)N[C@....
98 4YLZ Kd = 270 uM LAT NAG GAL n/a n/a
99 5CBL - LAT C12 H22 O11 C([C@@H]1[....
100 4YM0 Kd = 510 uM LAT NAG GAL n/a n/a
101 4YM2 Kd = 1400 uM SGA BGC n/a n/a
102 4YM3 Kd = 1900 uM LAT C12 H22 O11 C([C@@H]1[....
103 4YM1 Kd = 580 uM LAT FUC n/a n/a
104 1IS4 - LAT C12 H22 O11 C([C@@H]1[....
105 1WLD - GAL BGC n/a n/a
106 6FOF - LAT C12 H22 O11 C([C@@H]1[....
107 5NFB Kd = 0.77 uM 8VT C30 H40 N2 O13 CC(=O)N[C@....
108 5NF7 Kd = 37.5 uM 8VZ C16 H28 N2 O11 CC(=O)N[C@....
109 1SLA - NAG MAN GAL BMA NAG MAN NAG GAL n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GAL NDG; Similar ligands found: 310
No: Ligand ECFP6 Tc MDL keys Tc
1 GAL NDG 1 1
2 NDG GAL 1 1
3 NLC 1 1
4 MAN BMA NAG 0.847458 1
5 GLA GAL NAG 0.847458 1
6 GAL NAG GAL NAG GAL NAG 0.746269 0.918367
7 NAG GAL GAL NAG 0.746269 0.9375
8 NAG FUC 0.728814 0.934783
9 G6S NAG 0.723077 0.725806
10 NDG NAG 0.716667 0.9375
11 CBS CBS 0.716667 0.9375
12 NAG GDL 0.716667 0.9375
13 CBS 0.716667 0.9375
14 8VZ 0.694915 0.918367
15 GAL BGC NAG GAL 0.691176 1
16 NAG GAL NAG 0.676471 0.9375
17 NAG NAG NAG NDG 0.671875 0.918367
18 NAG NAG NDG 0.671875 0.918367
19 NAG NAG NAG NAG NDG 0.671875 0.918367
20 NAG NAG NDG NAG 0.671875 0.918367
21 CTO 0.671875 0.918367
22 NAG NAG NAG NAG NAG 0.671875 0.918367
23 NDG NAG NAG NDG 0.671875 0.918367
24 NAG NAG NAG NAG NAG NAG 0.671875 0.918367
25 NDG NAG NAG 0.671875 0.918367
26 NDG NAG NAG NAG 0.671875 0.918367
27 NAG NAG NAG NAG NAG NAG NAG NAG 0.671875 0.918367
28 NDG GAL FUC 0.671642 0.978261
29 DR2 0.671642 0.978261
30 FUL GAL NAG 0.671642 0.978261
31 FUC GAL NDG 0.671642 0.978261
32 FUC GAL NAG 0.671642 0.978261
33 NAG GAL FUC 0.671642 0.978261
34 GAL NAG FUC 0.671642 0.978261
35 NAG BMA MAN MAN MAN MAN 0.649351 1
36 GAL A2G 0.639344 1
37 GAL NGA 0.639344 1
38 A2G GAL 0.639344 1
39 GAL NAG MAN 0.632353 1
40 NAG NAG BMA MAN MAN 0.625 0.9375
41 UNU GAL NAG 0.608108 0.918367
42 BMA NAG MAN MAN MAN MAN MAN MAN MAN 0.60241 1
43 TCG 0.597222 0.775862
44 LAT NAG GAL 0.594595 1
45 GLC GAL NAG GAL 0.594595 1
46 FUC NDG GAL 0.585714 0.978261
47 HS2 0.585714 0.877551
48 GAL NDG FUC 0.585714 0.978261
49 NAG BMA 0.584615 0.897959
50 MAN BMA NAG NAG MAN NAG GAL GAL 0.581395 0.918367
51 NAG MAN MAN MAN NAG GAL NAG GAL 0.581395 0.918367
52 NAG GAL GAL NAG GAL 0.581081 0.9375
53 BGC GAL 0.578947 0.733333
54 LAT 0.578947 0.733333
55 GLC GAL 0.578947 0.733333
56 CBI 0.578947 0.733333
57 B2G 0.578947 0.733333
58 CBK 0.578947 0.733333
59 GLA GAL 0.578947 0.733333
60 BGC BMA 0.578947 0.733333
61 GAL BGC 0.578947 0.733333
62 MAL 0.578947 0.733333
63 GLA GLA 0.578947 0.733333
64 N9S 0.578947 0.733333
65 BMA GAL 0.578947 0.733333
66 LBT 0.578947 0.733333
67 MAB 0.578947 0.733333
68 GAL NAG GAL 0.575342 0.957447
69 NAG NAG BMA 0.567568 0.865385
70 BGC GAL NAG GAL 0.567568 1
71 NAG NDG BMA 0.567568 0.865385
72 GAL NAG GAL GLC 0.567568 1
73 U63 0.566667 0.673469
74 GAL MGC 0.5625 0.957447
75 A2G GAL NAG FUC 0.555556 0.918367
76 FUC GAL NAG A2G 0.555556 0.918367
77 SN5 SN5 0.552239 0.803922
78 NAG MAN BMA NDG MAN NAG GAL 0.549451 0.918367
79 NGA GAL BGC 0.549296 1
80 GCS GCS NAG 0.545455 0.918367
81 M5G 0.543478 0.9375
82 NAG NAG BMA MAN MAN NAG GAL NAG 0.543478 0.918367
83 GLA GAL GLC 0.540984 0.733333
84 CE5 0.540984 0.733333
85 GLC GAL GAL 0.540984 0.733333
86 BGC BGC GLC 0.540984 0.733333
87 CT3 0.540984 0.733333
88 BGC BGC BGC GLC 0.540984 0.733333
89 BGC GLC GLC GLC 0.540984 0.733333
90 GLC BGC BGC BGC BGC 0.540984 0.733333
91 BGC GLC GLC GLC GLC 0.540984 0.733333
92 GLC GLC GLC GLC GLC 0.540984 0.733333
93 GAL GAL GAL 0.540984 0.733333
94 BMA BMA BMA BMA BMA BMA 0.540984 0.733333
95 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.540984 0.733333
96 BMA BMA BMA 0.540984 0.733333
97 GLC BGC BGC 0.540984 0.733333
98 GLC BGC GLC 0.540984 0.733333
99 GLA GAL BGC 0.540984 0.733333
100 CTT 0.540984 0.733333
101 MAN BMA BMA BMA BMA 0.540984 0.733333
102 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.540984 0.733333
103 MLR 0.540984 0.733333
104 MAN BMA BMA 0.540984 0.733333
105 CTR 0.540984 0.733333
106 BGC BGC BGC 0.540984 0.733333
107 BMA MAN BMA 0.540984 0.733333
108 MAN MAN BMA BMA BMA BMA 0.540984 0.733333
109 BGC BGC BGC BGC BGC 0.540984 0.733333
110 GLC BGC BGC BGC BGC BGC 0.540984 0.733333
111 GLC BGC BGC BGC 0.540984 0.733333
112 GLC GLC BGC 0.540984 0.733333
113 CEY 0.540984 0.733333
114 MT7 0.540984 0.733333
115 CE8 0.540984 0.733333
116 B4G 0.540984 0.733333
117 BGC BGC BGC BGC BGC BGC 0.540984 0.733333
118 MAN BMA BMA BMA BMA BMA 0.540984 0.733333
119 CEX 0.540984 0.733333
120 BGC BGC BGC BGC 0.540984 0.733333
121 CE6 0.540984 0.733333
122 BGC GLC GLC GLC GLC GLC GLC 0.540984 0.733333
123 BGC GLC GLC 0.540984 0.733333
124 DXI 0.540984 0.733333
125 MTT 0.540984 0.733333
126 BMA BMA BMA BMA BMA 0.540984 0.733333
127 GAL NGA GLA BGC GAL 0.538462 1
128 ASG 0.532258 0.66129
129 NAG NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.531915 0.9375
130 GAL NAG GAL BGC 0.531646 0.957447
131 BEK GAL NAG 0.52381 0.789474
132 NAG GAL BGC 0.52 1
133 NDG 0.517857 0.888889
134 HSQ 0.517857 0.888889
135 NAG 0.517857 0.888889
136 A2G 0.517857 0.888889
137 BM3 0.517857 0.888889
138 NGA 0.517857 0.888889
139 4U1 0.51087 0.865385
140 NAG GAL SIA 0.51087 0.849057
141 LAT GLA 0.508475 0.733333
142 MMA MAN 0.508197 0.73913
143 DR5 0.508197 0.73913
144 GLA EGA 0.507937 0.73913
145 NAG A2G GAL 0.506494 0.9375
146 NGA GLA GAL BGC 0.506329 1
147 NAG NAG BMA MAN 0.506024 0.865385
148 MAG FUC GAL 0.5 0.9375
149 GLA GAL GAL 0.5 0.733333
150 FUC BGC GAL NAG GAL 0.494253 0.978261
151 BCW 0.493506 0.957447
152 FUC GAL NDG FUC 0.493506 0.957447
153 FUC GAL NAG FUC 0.493506 0.957447
154 FUC NAG GAL FUC 0.493506 0.957447
155 BDZ 0.493506 0.957447
156 GAL NAG FUC FUC 0.493506 0.957447
157 FUC NDG GAL FUC 0.493506 0.957447
158 GAL NDG FUC FUC 0.493506 0.957447
159 GAL LOG 0.492958 0.803571
160 NAG BMA NAG MAN MAN NAG NAG 0.48913 0.918367
161 GAL NOK 0.486111 0.8
162 4U2 0.483516 0.882353
163 2M4 0.483333 0.733333
164 8VW 0.482353 0.849057
165 GAL NAG GAL FUC 0.481481 0.978261
166 GLA NAG GAL FUC 0.481481 0.978261
167 GLC GLC XYP 0.478873 0.733333
168 BMA BMA 0.47619 0.680851
169 KPM 0.47619 0.846154
170 BGC BGC 0.47619 0.680851
171 MAN GLC 0.47541 0.733333
172 M3M 0.47541 0.733333
173 LB2 0.47541 0.733333
174 NGR 0.47541 0.733333
175 GAL A2G MBN 0.474359 0.957447
176 GAL SER A2G 0.473684 0.882353
177 BQZ 0.473684 0.666667
178 A2G SER GAL 0.473684 0.882353
179 NGA SER GAL 0.473684 0.882353
180 GAL TNR 0.473684 0.882353
181 NAG SIA GAL 0.473118 0.865385
182 TRE 0.471698 0.733333
183 NAG NGA 0.471429 0.9375
184 FUC BGC GAL 0.471429 0.755556
185 BGC BGC BGC BGC BGC BGC BGC BGC 0.471429 0.733333
186 NAG A2G 0.471429 0.9375
187 GAL FUC 0.46875 0.733333
188 FUC NAG GAL 0.467532 0.9
189 DR3 0.467532 0.978261
190 NAG MAN BMA MAN NAG GAL 0.467391 0.9375
191 FUC GAL NAG GAL BGC 0.465909 0.978261
192 GAL GLC NAG GAL FUC 0.465909 0.978261
193 GLC NAG GAL GAL FUC 0.465909 0.978261
194 A2G MBG 0.464789 0.957447
195 MBG A2G 0.464789 0.957447
196 XYT 0.463768 0.6
197 NAG GCU NAG GCD 0.463158 0.833333
198 CGC 0.462687 0.733333
199 GAL A2G THR 0.461538 0.882353
200 FUC C4W NAG BMA 0.460674 0.865385
201 GLA MBG 0.459016 0.73913
202 NAG GAL 0.457143 1
203 GAL NAG 0.457143 1
204 GLA GAL NAG FUC GAL GLC 0.456522 0.978261
205 BMA BMA MAN 0.454545 0.733333
206 MAL EDO 0.454545 0.702128
207 MAN MAN BMA 0.454545 0.733333
208 MAG 0.451613 0.893617
209 2F8 0.451613 0.893617
210 G2F BGC BGC BGC BGC BGC 0.450704 0.66
211 GLA GAL BGC 5VQ 0.449275 0.708333
212 GLC GAL NAG GAL FUC FUC 0.445652 0.957447
213 BGC GAL NAG GAL FUC FUC 0.445652 0.957447
214 NAG NAG NAG 0.443038 0.849057
215 NAG NAG NAG NAG 0.443038 0.849057
216 GAL GC2 0.443038 0.6875
217 FUC NAG GLA GAL 0.44186 0.957447
218 NAG GAL NGC 0.44 0.865385
219 BMA BMA GLA BMA BMA 0.44 0.733333
220 GLC BGC BGC BGC BGC BGC BGC 0.439394 0.733333
221 BGC BGC BGC GLC BGC BGC 0.439394 0.733333
222 NPO A2G GAL 0.439024 0.714286
223 GAL A2G NPO 0.439024 0.714286
224 8B7 0.438356 0.755556
225 LAT FUC 0.438356 0.755556
226 FUC GAL GLC 0.438356 0.755556
227 BGC GAL FUC 0.438356 0.755556
228 GLC GAL FUC 0.438356 0.755556
229 MDM 0.4375 0.73913
230 M13 0.4375 0.73913
231 GAL MBG 0.4375 0.73913
232 GLA GLA FUC 0.43662 0.755556
233 FUC GAL GLA 0.43662 0.755556
234 GAL GAL FUC 0.43662 0.755556
235 FUC GLA GLA 0.43662 0.755556
236 GLA GAL FUC 0.43662 0.755556
237 ABD 0.433735 0.977778
238 NAG BDP 0.432432 0.916667
239 NAG AMU 0.432099 0.9
240 NAG MUB 0.432099 0.9
241 A2G GAL BGC FUC 0.431818 0.978261
242 DOM 0.430769 0.702128
243 GLA GAL GLC NBU 0.430556 0.68
244 A2G GAL FUC 0.43038 0.978261
245 A2G GLA FUC 0.43038 0.978261
246 FUC GLA A2G 0.43038 0.978261
247 NGA GAL FUC 0.43038 0.978261
248 FUC GAL A2G 0.43038 0.978261
249 BGC GLA GAL FUC 0.43038 0.755556
250 BMA MAN MAN MAN 0.428571 0.733333
251 ACY 1GN GAL 1GN BGC ACY GAL BGC 0.426966 0.9375
252 1GN ACY GAL ACY 1GN BGC GAL BGC 0.426966 0.9375
253 GLC GLC GLC BGC 0.426667 0.733333
254 NAG NDG 0.426667 0.846154
255 NAG NAG 0.426667 0.846154
256 FMO 0.426471 0.66
257 BGC BGC BGC FRU 0.424658 0.66
258 GN1 0.424242 0.75
259 NG1 0.424242 0.75
260 CG3 A2G GAL 0.423529 0.703125
261 NAG NAG BMA BMA 0.423529 0.833333
262 NAG MAN BMA 0.423077 1
263 ABL 0.42029 0.877551
264 NAG MAN MAN 0.419753 1
265 LMT 0.418919 0.641509
266 UMQ 0.418919 0.641509
267 NAG MAN 0.418919 0.957447
268 NGA GAL 0.418919 0.93617
269 DMU 0.418919 0.641509
270 LMU 0.418919 0.641509
271 FUC C4W NAG BMA MAN 0.418367 0.865385
272 BMA FRU 0.41791 0.64
273 FRU GAL 0.41791 0.64
274 GAL NGA A2G 0.415584 0.9375
275 T6P 0.415385 0.6
276 RZM 0.415385 0.72549
277 FUC NAG 0.413333 0.88
278 NAG NAG BMA MAN NAG 0.412371 0.849057
279 BMA BMA BMA BMA 0.410959 0.733333
280 NAG MBG 0.410959 0.957447
281 DLD 0.409639 0.775862
282 BMX 0.409091 0.732143
283 FUC BGC GAL NAG 0.409091 0.978261
284 FUC GAL NAG GAL FUC 0.409091 0.957447
285 4QY 0.409091 0.732143
286 16G 0.409091 0.732143
287 4RS 0.408451 0.7
288 NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.408163 0.918367
289 GLC GLC XYS 0.407895 0.755556
290 FUC GAL NAG A2G FUC 0.406593 0.918367
291 NAG GAL FUC FUC A2G 0.406593 0.918367
292 SNG 0.40625 0.816327
293 MAN MNM 0.405797 0.84
294 AMU 0.405797 0.87234
295 MAN MAN MAN GLC 0.405405 0.733333
296 NOJ NAG NAG NAG 0.404762 0.803571
297 ASG GCD 0.404762 0.671875
298 NOJ NAG NAG 0.404762 0.818182
299 Z4S NAG NAG 0.404762 0.849057
300 L42 0.404762 0.646154
301 A2G GAL NAG FUC GAL GLC 0.40404 0.918367
302 GLC GAL NAG GAL FUC A2G 0.40404 0.918367
303 NAG NAG BMA MAN MAN MAN MAN 0.403846 0.865385
304 MAN BMA MAN 0.402778 0.733333
305 OXZ BGC BGC 0.4 0.690909
306 G3I 0.4 0.76
307 NBG 0.4 0.888889
308 GLO GLC GLC 0.4 0.73913
309 GAL BGC BGC XYS 0.4 0.702128
310 G2I 0.4 0.76
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3NV3; Ligand: GAL NAG MAN; Similar sites found with APoc: 2
This union binding pocket(no: 1) in the query (biounit: 3nv3.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 3M3E GAL A2G NPO None
2 3VV1 GAL FUC 34.058
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