Receptor
PDB id Resolution Class Description Source Keywords
3OGN 1.3 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF AN ODORANT-BINDING PROTEIN FROM THE SOU HOUSE MOSQUITO COMPLEXED WITH AN OVIPOSITION PHEROMONE CULEX QUINQUEFASCIATUS HELIX BUNDLE ODORANT-BINDING PROTEIN TRANSPORT PROTEIN
Ref.: CRYSTAL AND SOLUTION STRUCTURES OF AN ODORANT-BINDI PROTEIN FROM THE SOUTHERN HOUSE MOSQUITO COMPLEXED OVIPOSITION PHEROMONE. PROC.NATL.ACAD.SCI.USA V. 107 19102 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
3OG A:1;
B:1;
Valid;
Valid;
none;
none;
submit data
312.444 C18 H32 O4 CCCCC...
MG A:126;
A:127;
A:128;
B:126;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3OGN 1.3 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF AN ODORANT-BINDING PROTEIN FROM THE SOU HOUSE MOSQUITO COMPLEXED WITH AN OVIPOSITION PHEROMONE CULEX QUINQUEFASCIATUS HELIX BUNDLE ODORANT-BINDING PROTEIN TRANSPORT PROTEIN
Ref.: CRYSTAL AND SOLUTION STRUCTURES OF AN ODORANT-BINDI PROTEIN FROM THE SOUTHERN HOUSE MOSQUITO COMPLEXED OVIPOSITION PHEROMONE. PROC.NATL.ACAD.SCI.USA V. 107 19102 2010
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 473 families.
1 3OGN - 3OG C18 H32 O4 CCCCCCCCCC....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 355 families.
1 4FQT - 0VT C8 H14 O CC(=CCCC(=....
2 5EL2 - KBR C12 H23 N O3 CC[C@@H](C....
3 3N7H Kd = 31.3 uM DE3 C12 H17 N O CCN(CC)C(=....
4 3OGN - 3OG C18 H32 O4 CCCCCCCCCC....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 272 families.
1 4FQT - 0VT C8 H14 O CC(=CCCC(=....
2 5EL2 - KBR C12 H23 N O3 CC[C@@H](C....
3 3N7H Kd = 31.3 uM DE3 C12 H17 N O CCN(CC)C(=....
4 3OGN - 3OG C18 H32 O4 CCCCCCCCCC....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: 3OG; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 3OG 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3OGN; Ligand: 3OG; Similar sites found: 49
This union binding pocket(no: 1) in the query (biounit: 3ogn.bio2) has 20 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1HN4 MJI 0.03841 0.40962 None
2 4OGN 2U5 0.00689 0.4039 None
3 4MNS 2AX 0.00549 0.44103 2.41935
4 4XNV BUR 0.01442 0.41325 2.41935
5 3E2M E2M 0.03337 0.40707 2.41935
6 1EWF PC1 0.01202 0.41821 3.22581
7 1RL4 BL5 0.01052 0.41199 4.03226
8 2ZKJ ADP 0.0168 0.41029 4.03226
9 3B6C SDN 0.0003898 0.40916 4.03226
10 3KMZ EQO 0.004496 0.42391 4.83871
11 1DKF BMS 0.003701 0.42134 4.83871
12 2Z7I 742 0.03355 0.41377 4.83871
13 1Z8O DEB 0.01137 0.40551 4.83871
14 2R40 EPH 0.005097 0.42286 5.64516
15 1E8G FAD 0.01605 0.41494 5.64516
16 1E8G FCR 0.01538 0.41494 5.64516
17 1VGV UD1 0.01025 0.40757 5.64516
18 1K7L 544 0.01075 0.4052 5.64516
19 3KDU NKS 0.03222 0.40348 5.64516
20 4HBM 0Y7 0.006848 0.40952 5.83333
21 4ZOM 4Q3 0.04424 0.40976 6.45161
22 2BJ4 OHT 0.004011 0.41616 7.25806
23 5FAW CHT 0.01551 0.4093 7.25806
24 4ORM FMN 0.04209 0.40702 7.25806
25 4ORM 2V6 0.04209 0.40702 7.25806
26 4ORM ORO 0.04209 0.40702 7.25806
27 4WZ8 3W7 0.02982 0.40103 7.25806
28 4UCC ZKW 0.009462 0.41915 8.06452
29 2I0G I0G 0.01782 0.41768 8.06452
30 4B7P 9UN 0.02805 0.40485 8.06452
31 2E2R 2OH 0.005409 0.42934 8.87097
32 4JD3 PLM 0.01642 0.41534 8.87097
33 4JD3 COA 0.01509 0.41534 8.87097
34 1J78 OLA 0.003415 0.44828 9.67742
35 4ZBR DIF 0.01227 0.41034 9.67742
36 4ZBR NPS 0.01157 0.41034 9.67742
37 1SR7 MOF 0.01576 0.40409 9.67742
38 3TGE TGE 0.01717 0.42072 10.4839
39 5IR4 ZPE 0.02162 0.4078 10.4839
40 3CXH SMA 0.01272 0.40326 10.7527
41 3SHZ 5CO 0.009752 0.41048 11.2903
42 5EOB 5QQ 0.01452 0.42358 13.7097
43 4GFD 0YB 0.01136 0.40112 13.7097
44 2Y69 CHD 0.02717 0.40144 16.25
45 3V66 D3A 0.01987 0.40774 16.9355
46 1UUO BRF 0.0415 0.40364 18.5484
47 1UUO ORO 0.04045 0.40288 18.5484
48 1CMC SAM 0.004643 0.42327 25
49 1F0X FAD 0.02737 0.40013 25
Pocket No.: 2; Query (leader) PDB : 3OGN; Ligand: 3OG; Similar sites found: 21
This union binding pocket(no: 2) in the query (biounit: 3ogn.bio1) has 19 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4I4B NAD 0.03978 0.40871 None
2 3RET SAL 0.006536 0.40839 None
3 4I4B 1CV 0.01811 0.40786 None
4 4OAS 2SW 0.004122 0.40746 None
5 4IEH 1E9 0.01092 0.40532 None
6 3RET PYR 0.006536 0.40014 None
7 3QKD HI0 0.01071 0.40724 2.41935
8 5N17 8FK 0.009997 0.41274 3.22581
9 3AHO 3A2 0.008315 0.41233 3.22581
10 1GNI OLA 0.02853 0.45271 4.83871
11 5AZC PGT 0.01305 0.44357 4.83871
12 1H9G COA MYR 0.0136 0.40528 5.64516
13 1DLJ UGA 0.0438 0.40191 5.64516
14 3FPF MTA 0.03052 0.40175 5.64516
15 2QE4 JJ3 0.02114 0.41792 7.25806
16 5CSD ACD 0.01803 0.41204 8.06452
17 4OAR 2S0 0.007432 0.40791 9.67742
18 1ZDT PEF 0.01753 0.40011 9.67742
19 4V24 GYR 0.01973 0.40271 10.4839
20 1IYK MYA 0.02171 0.40072 11.2903
21 3WCA FPS 0.01898 0.40108 17.7419
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