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Receptor
PDB id Resolution Class Description Source Keywords
3P2E 1.68 Å EC: 2.-.-.- STRUCTURE OF AN ANTIBIOTIC RELATED METHYLTRANSFERASE ESCHERICHIA COLI METHYLTRANSFERASE TRANSFERASE NPMA
Ref.: STRUCTURAL BASIS FOR THE METHYLATION OF A1408 IN 16 A PANAMINOGLYCOSIDE RESISTANCE METHYLTRANSFERASE NP CLINICAL ISOLATE AND ANALYSIS OF THE NPMA INTERACTI THE 30S RIBOSOMAL SUBUNIT. NUCLEIC ACIDS RES. 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SAH A:6732;
B:6732;
Valid;
Valid;
none;
none;
Kd = 0.6 uM
384.411 C14 H20 N6 O5 S c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3P2E 1.68 Å EC: 2.-.-.- STRUCTURE OF AN ANTIBIOTIC RELATED METHYLTRANSFERASE ESCHERICHIA COLI METHYLTRANSFERASE TRANSFERASE NPMA
Ref.: STRUCTURAL BASIS FOR THE METHYLATION OF A1408 IN 16 A PANAMINOGLYCOSIDE RESISTANCE METHYLTRANSFERASE NP CLINICAL ISOLATE AND ANALYSIS OF THE NPMA INTERACTI THE 30S RIBOSOMAL SUBUNIT. NUCLEIC ACIDS RES. 2010
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 269 families.
1 3MTE - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 3PB3 - SAH C14 H20 N6 O5 S c1nc(c2c(n....
3 3P2E Kd = 0.6 uM SAH C14 H20 N6 O5 S c1nc(c2c(n....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 237 families.
1 3MTE - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 3PB3 - SAH C14 H20 N6 O5 S c1nc(c2c(n....
3 3P2E Kd = 0.6 uM SAH C14 H20 N6 O5 S c1nc(c2c(n....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 187 families.
1 3MQ2 - SAH C14 H20 N6 O5 S c1nc(c2c(n....
2 3MTE - SAM C15 H22 N6 O5 S C[S@@+](CC....
3 3PB3 - SAH C14 H20 N6 O5 S c1nc(c2c(n....
4 3P2E Kd = 0.6 uM SAH C14 H20 N6 O5 S c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SAH; Similar ligands found: 211
No: Ligand ECFP6 Tc MDL keys Tc
1 SAH 1 1
2 5X8 0.759494 0.969697
3 A7D 0.734177 0.926471
4 TT8 0.709302 0.970588
5 DSH 0.692308 0.914286
6 SXZ 0.692308 0.916667
7 DTA 0.666667 0.857143
8 3DH 0.662338 0.869565
9 S8M 0.655556 0.901408
10 SFG 0.635294 0.954545
11 SA8 0.62069 0.915493
12 EEM 0.617977 0.890411
13 MTA 0.615385 0.869565
14 SAI 0.613636 0.955882
15 S7M 0.586957 0.916667
16 36A 0.586538 0.90411
17 K15 0.583333 0.878378
18 ADN 0.573333 0.84058
19 RAB 0.573333 0.84058
20 XYA 0.573333 0.84058
21 62X 0.572917 0.855263
22 5CD 0.571429 0.852941
23 0UM 0.5625 0.876712
24 5N5 0.558442 0.84058
25 A4D 0.551282 0.867647
26 SAM 0.537634 0.916667
27 SMM 0.536842 0.88
28 SSA 0.536842 0.712644
29 KB1 0.534653 0.902778
30 A5D 0.532609 0.857143
31 SIB 0.53125 0.928571
32 EP4 0.530864 0.819444
33 DSZ 0.530612 0.732558
34 GSU 0.53 0.752941
35 A 0.529412 0.763158
36 LMS 0.529412 0.694118
37 AMP 0.529412 0.763158
38 5CA 0.525773 0.712644
39 ME8 0.524752 0.8125
40 M2T 0.52439 0.821918
41 6RE 0.523256 0.824324
42 GJV 0.522727 0.813333
43 AAT 0.515789 0.863014
44 LSS 0.515152 0.696629
45 KAA 0.514852 0.727273
46 J7C 0.511364 0.835616
47 A5A 0.510417 0.697674
48 SON 0.505495 0.805195
49 SRP 0.505155 0.805195
50 F0P 0.504505 0.915493
51 54H 0.5 0.681818
52 VMS 0.5 0.681818
53 ADX 0.5 0.694118
54 CA0 0.5 0.769231
55 AMO 0.5 0.805195
56 5AL 0.5 0.779221
57 KH3 0.5 0.866667
58 NVA LMS 0.49505 0.707865
59 AHX 0.49505 0.753086
60 TSB 0.494949 0.689655
61 53H 0.494949 0.674157
62 G5A 0.494737 0.712644
63 ABM 0.494382 0.74359
64 A2D 0.494382 0.74359
65 ZAS 0.494253 0.808219
66 A6D 0.490196 0.759494
67 8QN 0.49 0.779221
68 GEK 0.49 0.956522
69 GAP 0.489583 0.769231
70 AN2 0.48913 0.734177
71 A3S 0.48913 0.884058
72 S4M 0.488889 0.831169
73 SRA 0.488636 0.746835
74 LAD 0.485437 0.810127
75 52H 0.484848 0.674157
76 A12 0.483516 0.759494
77 BA3 0.483516 0.74359
78 AP2 0.483516 0.759494
79 NEC 0.483146 0.788732
80 AOC 0.483146 0.842857
81 Y3J 0.481481 0.768116
82 VRT 0.479167 0.861111
83 50T 0.478723 0.734177
84 B4P 0.478261 0.74359
85 ADP 0.478261 0.74359
86 5AS 0.478261 0.655556
87 AP5 0.478261 0.74359
88 A3N 0.477778 0.830986
89 YSA 0.476636 0.712644
90 XAH 0.476636 0.768293
91 0XU 0.473684 0.897059
92 AT4 0.473118 0.7375
93 WAQ 0.471154 0.807692
94 NSS 0.470588 0.712644
95 5AD 0.468354 0.791045
96 AU1 0.468085 0.725
97 M33 0.468085 0.734177
98 MAO 0.467391 0.797468
99 TXA 0.466667 0.759494
100 NB8 0.466667 0.775
101 A3G 0.466667 0.871429
102 3AM 0.465909 0.727273
103 DAL AMP 0.465347 0.779221
104 8X1 0.465347 0.707865
105 A3T 0.463158 0.842857
106 ATP 0.463158 0.74359
107 HEJ 0.463158 0.74359
108 ACP 0.463158 0.746835
109 7D7 0.4625 0.785714
110 LEU LMS 0.461538 0.688889
111 9ZA 0.460784 0.740741
112 9ZD 0.460784 0.740741
113 5FA 0.458333 0.74359
114 AQP 0.458333 0.74359
115 AR6 0.458333 0.766234
116 APC 0.458333 0.759494
117 APR 0.458333 0.766234
118 PRX 0.458333 0.746835
119 F2R 0.457627 0.75
120 IOT 0.456897 0.761905
121 4AD 0.456311 0.794872
122 PAJ 0.456311 0.722892
123 WSA 0.45614 0.72093
124 YAP 0.453704 0.794872
125 8PZ 0.453704 0.712644
126 FA5 0.453704 0.805195
127 ADP PO3 0.453608 0.763158
128 ADV 0.453608 0.782051
129 NVA 2AD 0.453608 0.849315
130 SAP 0.453608 0.728395
131 AGS 0.453608 0.728395
132 RBY 0.453608 0.782051
133 AD9 0.453608 0.725
134 PTJ 0.45283 0.731707
135 MHZ 0.452632 0.797468
136 00A 0.451923 0.740741
137 A3P 0.451613 0.74026
138 YLP 0.451327 0.771084
139 7MD 0.45045 0.768293
140 ALF ADP 0.45 0.707317
141 ADP ALF 0.45 0.707317
142 2VA 0.447917 0.819444
143 OOB 0.446602 0.779221
144 ANP 0.444444 0.725
145 T99 0.444444 0.7375
146 ACQ 0.444444 0.746835
147 TAT 0.444444 0.7375
148 P5A 0.443396 0.719101
149 7D5 0.443182 0.708861
150 A1R 0.442308 0.7625
151 YLC 0.439655 0.790123
152 2AM 0.438202 0.717949
153 DLL 0.438095 0.779221
154 ARG AMP 0.4375 0.759036
155 A22 0.436893 0.734177
156 D3Y 0.436893 0.859155
157 ATF 0.435644 0.716049
158 MYR AMP 0.435185 0.746988
159 80F 0.434426 0.75
160 SO8 0.434343 0.808219
161 OAD 0.433962 0.769231
162 3UK 0.433962 0.769231
163 TAD 0.433628 0.765432
164 25A 0.432692 0.74359
165 6YZ 0.431373 0.746835
166 VO4 ADP 0.431373 0.734177
167 ADP VO4 0.431373 0.734177
168 9SN 0.431193 0.731707
169 TYM 0.431034 0.805195
170 B5V 0.429907 0.759494
171 PR8 0.429907 0.8
172 ADQ 0.428571 0.746835
173 YLB 0.42735 0.771084
174 9K8 0.425926 0.67033
175 1ZZ 0.425926 0.746988
176 FYA 0.425926 0.779221
177 3OD 0.425926 0.769231
178 PPS 0.425743 0.674419
179 MAP 0.423077 0.707317
180 A2P 0.421053 0.727273
181 4YB 0.421053 0.735632
182 9X8 0.420561 0.75
183 ADP BMA 0.420561 0.746835
184 TYR AMP 0.419643 0.794872
185 5SV 0.419048 0.731707
186 3NZ 0.416667 0.824324
187 YLA 0.416667 0.771084
188 8Q2 0.415254 0.688889
189 A3R 0.415094 0.7625
190 B5Y 0.414414 0.75
191 B5M 0.414414 0.75
192 48N 0.413793 0.753086
193 LPA AMP 0.413793 0.768293
194 AYB 0.413223 0.761905
195 ACK 0.413043 0.710526
196 QQY 0.413043 0.696203
197 BIS 0.412844 0.719512
198 JB6 0.412844 0.7625
199 PAP 0.41 0.730769
200 DQV 0.408696 0.75641
201 OVE 0.408602 0.7125
202 AMP DBH 0.40708 0.746835
203 4UV 0.40708 0.75
204 3AD 0.406977 0.852941
205 AF3 ADP 3PG 0.40678 0.743902
206 OMR 0.40678 0.738095
207 LAQ 0.405172 0.768293
208 A A 0.40367 0.74359
209 7C5 0.403509 0.789474
210 7MC 0.403361 0.75
211 4UU 0.4 0.75
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3P2E; Ligand: SAH; Similar sites found with APoc: 595
This union binding pocket(no: 1) in the query (biounit: 3p2e.bio2) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 3DXY SAM None
2 4POO SAM None
3 2VDV SAM 1.33333
4 3KYF 5GP 5GP 1.33333
5 4K26 SFF 1.33333
6 4DSG UDP 1.33333
7 4DSG FAD 1.33333
8 4K26 NDP 1.33333
9 1NFQ NAI 1.53846
10 2O07 SPD 1.64474
11 2O07 MTA 1.64474
12 5ZW3 SAH 1.77778
13 5TTJ FAD 1.77778
14 5E1M PRO PRO LYS ARG ILE ALA 1.77778
15 5E1M SAH 1.77778
16 2JAP NDP 1.77778
17 1UAY ADN 1.77778
18 2JAH NDP 1.77778
19 3NTA FAD 1.77778
20 3FZG SAM 2
21 3LCC SAH 2.22222
22 5EEH SAH 2.22222
23 5EEH P9P 2.22222
24 2IVD FAD 2.22222
25 3L9W AMP 2.22222
26 1VL8 NAP 2.22222
27 3L9W GSH 2.22222
28 5ME4 HP4 2.22222
29 3CH6 311 2.22222
30 3CH6 NAP 2.22222
31 3A4V NAD 2.22222
32 3A4V PYR 2.22222
33 3OID NDP 2.22222
34 4BJZ P3A 2.22222
35 4BJZ FAD 2.22222
36 2Q3M MLA 2.22222
37 3K6V CIT 2.22222
38 1NAA 6FA 2.22222
39 5Z2L NDP 2.22222
40 1SOW NAD 2.22222
41 5N6C NAD 2.33333
42 5ZZ6 ADP 2.40385
43 5N53 8NB 2.5641
44 6GKV SAH 2.66667
45 3HVJ 705 2.66667
46 3TKY SAH 2.66667
47 1NV8 MEQ 2.66667
48 1V59 NAD 2.66667
49 3PT9 SAH 2.66667
50 1NV8 SAM 2.66667
51 3ELW SAM 2.66667
52 3ELW GP3 2.66667
53 3GCZ SAM 2.66667
54 2YY7 NAD 2.66667
55 3EVG SAH 2.66667
56 4YUW S4M 2.66667
57 4YUW 4JU 2.66667
58 5JJR SAH 2.66667
59 1BDB NAD 2.66667
60 1KYQ NAD 2.66667
61 1V59 FAD 2.66667
62 4ITU 1HS 2.66667
63 4ITU NAI 2.66667
64 5TWB FAD 2.66667
65 4C3Y ANB 2.66667
66 4C3Y FAD 2.66667
67 5KMS NAD 2.66667
68 1ZK4 NAP 2.66667
69 5XNC MTA 2.66667
70 5J60 FAD 2.66667
71 2GDZ NAD 2.66667
72 5KMS FAD 2.66667
73 1AE1 NAP 2.66667
74 4FC7 NAP 2.66667
75 4FC7 COA 2.66667
76 3ZV6 NAD 2.66667
77 3ZV6 4HB 2.66667
78 4HA6 FAD 2.66667
79 4G6I RS3 2.85714
80 2BRY FAD 3.01811
81 3G2O SAM 3.11111
82 2GN4 NDP 3.11111
83 1Q9I TEO 3.11111
84 1Q9I FAD 3.11111
85 3BGD SAH 3.11111
86 1Q8V MAN MAN 3.11111
87 4D5G TPP 3.11111
88 4D5G FAD 3.11111
89 2PHU MAN MAN 3.11111
90 4RDI ATP 3.11111
91 2GND MAN 3.11111
92 2EFJ SAH 3.11111
93 2PHT MAN MAN MAN 3.11111
94 1WG8 SAM 3.11111
95 4D79 ATP 3.11111
96 2GN4 UD1 3.11111
97 4Y9D NAI 3.11111
98 2IV2 MGD 3.11111
99 1Q8O MAN MMA 3.11111
100 4ZCC NAI 3.11111
101 4ZCC FAD 3.11111
102 3BGD PM6 3.11111
103 4NTD FAD 3.11111
104 4RDH AMP 3.11111
105 3LXD FAD 3.11111
106 3NUG NAD 3.11111
107 1KNR FAD 3.11111
108 1ORR NAD 3.11111
109 5FJN BE2 3.11111
110 5FJN FAD 3.11111
111 1X87 NAD 3.11111
112 4B63 ORN 3.11111
113 4B63 FAD 3.11111
114 4B63 NAP 3.11111
115 5OC1 FAD 3.11111
116 1ZBQ NAD 3.11111
117 3LAD FAD 3.11111
118 2IV2 2MD 3.11111
119 2PHF MAN MAN BMA MAN 3.11111
120 2GNB MAN 3.11111
121 1GZ6 NAI 3.11111
122 2PHR MAN MAN BMA MAN 3.11111
123 3FG2 FAD 3.11111
124 1BZL GCG 3.11111
125 2YG3 FAD 3.11111
126 3CBG SAH 3.11111
127 2GNM MAN 3.11111
128 4EIP FAD 3.11111
129 3DUW SAH 3.13901
130 1WY7 SAH 3.38164
131 3EGI ADP 3.39806
132 2UYQ SAM 3.55556
133 1G60 SAM 3.55556
134 3MAN BMA BMA MAN 3.55556
135 6D6Y SAH 3.55556
136 3A4T SFG 3.55556
137 1JG3 ADN 3.55556
138 3FUU ADN 3.55556
139 5CUQ NSC 3.55556
140 5HJM MTA 3.55556
141 2V3V MGD 3.55556
142 3VYW SAM 3.55556
143 1XCL SAH 3.55556
144 2YX1 SFG 3.55556
145 4CQM NAP 3.55556
146 1P1C SAH 3.55556
147 2WA2 SAM 3.55556
148 3AB1 FAD 3.55556
149 1H82 FAD 3.55556
150 2PX8 SAH 3.55556
151 4GKV NAD 3.55556
152 3E1T FAD 3.55556
153 4EMI FAD 3.55556
154 4EMI NAD 3.55556
155 1H82 GZZ 3.55556
156 2EXX NAP 3.55556
157 5J5Z FAD 3.55556
158 4U36 TNR 3.55556
159 2H88 TEO 3.55556
160 6DUB SAH 3.6036
161 4X7Y SAH 3.64964
162 1YC5 NCA 3.65854
163 4XUC 43G 3.66972
164 4XUC SAM 3.66972
165 2JK0 ASP 3.69231
166 1NW5 SAM 3.76176
167 1ELI PYC 3.85604
168 5GWX SAM 3.87324
169 5GWX SAR 3.87324
170 1EJ0 SAM 3.88889
171 3A25 SAM 3.98671
172 5WP4 SAH 4
173 6ARJ BW4 4
174 5FUB SAH 4
175 6ARJ SAH 4
176 4PIO SAH 4
177 4PIO AVI 4
178 5DX8 SFG 4
179 1Q0S SAH 4
180 3O7W SAM 4
181 5DXA SFG 4
182 5DX1 SFG 4
183 5DWQ SFG 4
184 5DX0 SFG 4
185 6BQ6 TER 4
186 5FWA J7C 4
187 4RSL FAD 4
188 1YY5 FAD 4
189 6GAS FAD 4
190 4M52 FAD 4
191 2AE2 PTO 4
192 2RH4 EMO 4
193 1YQZ FAD 4
194 3AD8 NAD 4
195 2A8X FAD 4
196 2AE2 NAP 4
197 1FNZ A2G 4
198 2ZXI FAD 4
199 5I39 FAD 4
200 4YJ1 ADP 4
201 2RGJ FAD 4
202 4TXI FAD 4
203 2HXW FLC 4
204 2YVJ FAD 4
205 1AX2 NDG GAL 4
206 1PS9 FAD 4
207 3NYC IAR 4
208 3NYC FAD 4
209 2YVF FAD 4
210 2YVF NAD 4
211 5OFW 9TW 4.03587
212 3WV8 ATP 4.12844
213 4FZV SAM 4.1841
214 1JGS SAL 4.34783
215 3GU3 SAH 4.44444
216 1TPY SAH 4.44444
217 3X0D SAH 4.44444
218 3DMH SAM 4.44444
219 1JQ3 AAT 4.44444
220 3S1S SAH 4.44444
221 1QXA GLY GLY GLY 4.44444
222 5VN0 FAD 4.44444
223 5VN0 NAI 4.44444
224 1DL5 SAH 4.44444
225 3DMH GMP 4.44444
226 3QJ4 FAD 4.44444
227 3AYI FAD 4.44444
228 3AYI HCI 4.44444
229 3HDY FDA 4.44444
230 3HDY GDU 4.44444
231 4UCI SAM 4.44444
232 3TN7 NJP 4.44444
233 3GDN HBX 4.44444
234 3GDN FAD 4.44444
235 5WUW NAP 4.44444
236 5Y8L NAD 4.44444
237 5Y8L HUI 4.44444
238 3HDY FAD 4.44444
239 6CI9 NAP 4.44444
240 5G3U FDA 4.49173
241 5G3U ITW 4.49173
242 4K79 GAL A2G 4.54545
243 4NYT PC 4.60829
244 3OFK SAH 4.62963
245 2HMT NAI 4.86111
246 5WP5 SAH 4.88889
247 2OBF SAH 4.88889
248 2OBF F83 4.88889
249 3VC1 GST 4.88889
250 3VC1 SAH 4.88889
251 1G55 SAH 4.88889
252 1QZZ SAM 4.88889
253 4A6D SAM 4.88889
254 3TKA SAM 4.88889
255 1GEG NAD 4.88889
256 5BVA FAD 4.88889
257 5N0J FAD 4.88889
258 2DT5 NAD 4.88889
259 2JHP SAH 4.88889
260 4JCA CIT 4.88889
261 1DMR PGD 4.88889
262 4YNU FAD 4.88889
263 4YNU LGC 4.88889
264 3S5W FAD 4.88889
265 1H0H MGD 4.88889
266 2IZ1 ATR 4.88889
267 1GPE FAD 4.88889
268 2EWM NAD 4.88889
269 3G5S FAD 4.88889
270 2NPX FAD 4.88889
271 2NPX NAD 4.88889
272 1H2B NAJ 4.88889
273 2VPY MGD 5.12821
274 2FK8 SAM 5.33333
275 2JJQ SAH 5.33333
276 1RJD SAM 5.33333
277 2A14 SAH 5.33333
278 2ZWA SAH 5.33333
279 4YAC NAI 5.33333
280 1GTE FAD 5.33333
281 3K7M FAD 5.33333
282 4TM3 FAD 5.33333
283 6AIN FAD 5.33333
284 2Q7V FAD 5.33333
285 1LVL NAD 5.33333
286 2WK1 SAH 5.33333
287 3QWI CUE 5.33333
288 3QWI NAP 5.33333
289 6F7L FAD 5.33333
290 1ZEM NAD 5.33333
291 2NVK FAD 5.33333
292 5UAV NDP 5.33333
293 5UAV TFB 5.33333
294 5HSA FAS 5.33333
295 4F8L AES 5.51724
296 3Q87 SAM 5.6
297 2EG5 SAH 5.77778
298 1XDS SAM 5.77778
299 3RKR NAP 5.77778
300 5FTW SAH 5.77778
301 2WHL MAN BMA BMA 5.77778
302 4DCM SAM 5.77778
303 5XLX SAH 5.77778
304 1U2Z SAH 5.77778
305 2E5V FAD 5.77778
306 3FXU TSU 5.77778
307 3F8D FAD 5.77778
308 1R27 MGD 5.77778
309 5K0A FAD 5.77778
310 2VT3 ATP 5.77778
311 3FPZ AHZ 5.77778
312 1O97 AMP 5.77778
313 1O97 FAD 5.77778
314 5NA1 FAD 5.77778
315 1ZQ9 SAM 5.77778
316 4USR FAD 5.77778
317 2R4J 13P 5.77778
318 2R4J FAD 5.77778
319 2B7N NTM 5.86081
320 4YKG FAD 6.14203
321 4YKG NAD 6.14203
322 4DMG SAM 6.22222
323 5E9W SAH 6.22222
324 5E8J SAH 6.22222
325 5W7M SAH 6.22222
326 3VSE SAH 6.22222
327 5THY SAH 6.22222
328 3FRH SAH 6.22222
329 5THZ SAH 6.22222
330 5X62 SAH 6.22222
331 4BLW AMP 6.22222
332 3MAG SAH 6.22222
333 3MCT SAH 6.22222
334 5YF1 8V0 6.22222
335 2IID FAD 6.22222
336 2IID PHE 6.22222
337 1D1Q 4NP 6.22222
338 5YF1 SFG 6.22222
339 5TS5 FAD 6.22222
340 3KLJ FAD 6.22222
341 3C6K SPD 6.22222
342 3EVF SAH 6.22222
343 3EVF GTA 6.22222
344 1EU1 MGD 6.22222
345 3GD4 FAD 6.22222
346 3GD4 NAD 6.22222
347 3IHG FAD 6.22222
348 2RGO FAD 6.22222
349 4BLW SAH 6.22222
350 3C6K MTA 6.22222
351 4NBU NAI 6.22222
352 4BV6 FAD 6.22222
353 1XSE NDP 6.22222
354 3OZ2 FAD 6.22222
355 4MOP 2H5 6.22222
356 5W7K SAH 6.66667
357 2EJU SAH 6.66667
358 4OBW SAM 6.66667
359 1KPG SAH 6.66667
360 3GDH SAH 6.66667
361 2BZG SAH 6.66667
362 5W7R SAH 6.66667
363 1N2X SAM 6.66667
364 5W7R 9Z7 6.66667
365 1REO FAD 6.66667
366 5FFF NAP 6.66667
367 5FEU NAP 6.66667
368 1PN0 IPH 6.66667
369 1PN0 FAD 6.66667
370 4NTC FAD 6.66667
371 5FFF 5XC 6.66667
372 1XHC FAD 6.66667
373 2GV8 FAD 6.66667
374 2GVC FAD 6.66667
375 2VVM FAD 6.66667
376 2VVL FAD 6.66667
377 4JNA FAD 7.05882
378 2PXX SAH 7.11111
379 5KOK SAH 7.11111
380 4Y30 SAH 7.11111
381 4Y30 49L 7.11111
382 2PWY SAH 7.11111
383 4R6W SAH 7.11111
384 4R6W PC 7.11111
385 4ONQ SFG 7.11111
386 5O42 9JW 7.11111
387 5O42 NAD 7.11111
388 5O42 BGC 7.11111
389 1BC5 SAH 7.11111
390 2CDU FAD 7.11111
391 4J36 FAD 7.11111
392 5U8U FAD 7.11111
393 2CDU ADP 7.11111
394 5KOK S9T 7.11111
395 1UP7 NAD 7.11111
396 5KOK R9T 7.11111
397 3VPD CIT 7.11111
398 1UWK URO 7.36086
399 1UWK NAD 7.36086
400 4XQC 13D 7.55556
401 4XQC NAD 7.55556
402 2Z3Y F2N 7.55556
403 1RP0 AHZ 7.55556
404 2WSB NAD 7.55556
405 1RSG FAD 7.55556
406 1RYI FAD 7.55556
407 4J1Q NDP 7.55556
408 3D3W NAP 7.55556
409 1RYI GOA 7.55556
410 2GMH FAD 7.55556
411 1I8T FAD 7.55556
412 5X68 FAD 7.55556
413 1PR9 NAP 7.55556
414 4X9M FAD 7.55556
415 3U31 NAD 7.55556
416 5KOX RFP 7.55556
417 5KOX FAD 7.55556
418 1E5Q NDP 7.55556
419 5YEC ATP 7.56302
420 2AOT SAH 8
421 3G89 SAM 8
422 1JQD HSM 8
423 5ICE SAH 8
424 5ICE 2H4 8
425 2DPM SAM 8
426 3A27 SAM 8
427 1JQD SAH 8
428 3L6C MLI 8
429 2P41 SAH 8
430 2ZIF SAM 8.44444
431 4FN4 NAD 8.44444
432 1RJW ETF 8.44444
433 1Y8Q ATP 8.44444
434 5BJX UDP 8.44444
435 5BJX NAD 8.44444
436 5JWC FAD 8.44444
437 2DKH FAD 8.44444
438 2DKH 3HB 8.44444
439 2DTX BMA 8.44444
440 3X0V FAD 8.44444
441 3ICT FAD 8.44444
442 5MZI FYK 8.44444
443 5MZI FAD 8.44444
444 3UCL FAD 8.44444
445 3UCL CYH 8.44444
446 3UCL NAP 8.44444
447 5Y77 FAD 8.44444
448 3ICR FAD 8.44444
449 3ICS FAD 8.44444
450 1IM8 SAI 8.60656
451 1FL2 FAD 8.70968
452 5M58 SAH 8.88889
453 4M37 SAH 8.88889
454 3MB5 SAM 8.88889
455 4M38 SAH 8.88889
456 5ERG SAM 8.88889
457 3GMB FAD 8.88889
458 1COY FAD 8.88889
459 1M2K APR 8.88889
460 3H8V ATP 8.88889
461 1COY AND 8.88889
462 1KYZ SAH 9.33333
463 1D4D FAD 9.33333
464 1KYZ FER 9.33333
465 4RPL FAD 9.33333
466 4RPL 3UC 9.33333
467 1Z3C SA8 9.33333
468 4YDD MGD 9.33333
469 4YDD MD1 9.33333
470 4ZVV NAD 9.33333
471 4ZVV GN0 9.33333
472 2JB2 FAD 9.33333
473 4XBA GMP 9.33333
474 2JB2 PHE 9.33333
475 3T31 FAD 9.33333
476 3T31 DCQ 9.33333
477 4YAG NAI 9.33333
478 2F5Z FAD 9.375
479 3QFA FAD 9.48276
480 3ML1 MGD 9.62963
481 3I53 SAH 9.63855
482 3JWH SAH 9.67742
483 1XHL NDP 9.76431
484 5MGZ SAH 9.77778
485 5MPT SAH 9.77778
486 1QAN SAH 9.77778
487 4II2 ATP 9.77778
488 1XKQ NDP 9.77778
489 5HXI FAD 9.77778
490 5HXI 5HN 9.77778
491 3SSO SAH 9.77778
492 5YJ0 EF2 9.90991
493 5YJ1 6EL 9.90991
494 5YIZ EF2 9.90991
495 4IWN GEK 10.2222
496 1V6A TRE 10.2222
497 2NXE SAM 10.2222
498 5Z75 NAD 10.2222
499 5EB4 FAD 10.2222
500 3GEG NAD 10.6667
501 1BW9 NAD 10.6667
502 4WBD CIT 10.6667
503 4ODV GP1 Z9M 10.6667
504 3P9C SAH 10.6667
505 5MW4 5JU 11.1111
506 3QOX SAH 11.1111
507 2C7G FAD 11.1111
508 3WMX NAD 11.1732
509 1G8K MGD 11.2782
510 4FWE FAD 11.5556
511 4GUS FAD 11.5556
512 4HSU FAD 11.5556
513 4GUT FAD 11.5556
514 1R37 NAD 11.5556
515 5BUK FAD 11.5556
516 3CTY FAD 11.5556
517 1L1E SAH 12
518 4C4A SAH 12
519 1I1N SAH 12
520 3LZW FAD 12
521 3M6W SAM 12
522 3LZW NAP 12
523 5MBX FAD 12
524 5MBX SP5 12
525 1KQF MGD 12
526 5ZYN FAD 12
527 4GQB 0XU 12.4444
528 5FA5 MTA 12.4444
529 1KPH SAH 12.4444
530 4X60 3XV 12.4444
531 4X60 SFG 12.4444
532 6GFK SAH 12.4444
533 1R18 SAH 12.4444
534 4G5H UD7 12.4444
535 4G5H NAP 12.4444
536 3GRU AMP 12.4444
537 4USQ FAD 12.4444
538 3SJU NDP 12.4444
539 2NYA MGD 12.8889
540 5T2U NAP 12.9032
541 4M73 M72 13.3333
542 4M73 SAH 13.3333
543 4OPC PGT 13.3333
544 4YSX FAD 13.3333
545 2BD0 NAP 13.5246
546 1LSS NAD 13.5714
547 5L95 AMP 13.75
548 1VE3 SAM 13.7778
549 6B92 SAH 13.7778
550 2XYQ SAH 13.7778
551 4YRY NAD 13.7778
552 4YRY FAD 13.7778
553 5YJI 8WO 13.7778
554 5YJI SAH 13.7778
555 3GWZ SAH 14.2222
556 5DM1 5D7 14.2222
557 5DM1 SAH 14.2222
558 3GXO SAH 14.2222
559 4ZA2 NAD 14.2292
560 5DLY 5D7 14.6667
561 5DLY SAH 14.6667
562 1IY8 NAD 14.6667
563 4URF NAD 15.1111
564 4CS9 AMP 15.3439
565 2QA1 FAD 15.5556
566 1G0N PHH 15.5556
567 1G0N NDP 15.5556
568 5WGR FAD 16
569 2XVM SAH 16.4444
570 3TLJ SAH 16.4444
571 4L2I FAD 16.8889
572 4IEE AGS 17.3333
573 3SJ7 NDP 17.7778
574 6FDF SAH 18.6667
575 1QO8 FAD 18.6667
576 4K5S PM0 18.6667
577 4K5S FAD 18.6667
578 2W68 SIA GAL BGC 18.9744
579 4AZW SAM 19.1111
580 3CGD FAD 19.1111
581 3CGD COA 19.1111
582 3CGD NAD 19.1111
583 3CGB FAD 19.1111
584 3NTD FAD 20
585 3FPF TNA 20.4444
586 3NDJ SAH 20.4444
587 3NDJ JHZ 20.4444
588 3FPF MTA 20.4444
589 6F97 FAD 20.4444
590 2PT9 2MH 21.3333
591 2I7C AAT 21.3333
592 2PT9 S4M 21.3333
593 4N49 SAM 21.3333
594 4QTU SAM 21.4815
595 1E6E FAD 23.4375
Pocket No.: 2; Query (leader) PDB : 3P2E; Ligand: SAH; Similar sites found with APoc: 16
This union binding pocket(no: 2) in the query (biounit: 3p2e.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 6GAR FAD 2.22222
2 1UKG MMA 3.11111
3 4NTO 1PW 4
4 5MIT FAD 4.88889
5 5MIT NAP 4.88889
6 1YBH FAD 5.77778
7 4J36 1HR 7.11111
8 4EMJ FAD 7.47664
9 1EFV AMP 7.55556
10 2GAG NAD 8.88889
11 2GAG FAD 8.88889
12 5C9P FUC 10.2222
13 1MO9 FAD 13.3333
14 1MO9 KPC 13.3333
15 2Q0L FAD 15.5556
16 2PUZ NIG 16.4444
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