Receptor
PDB id Resolution Class Description Source Keywords
3RWO 1.7 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF YPT32 IN COMPLEX WITH GDP SACCHAROMYCES CEREVISIAE GTPASES PROTEIN-GDP COMPLEX EXOCYTOSIS GOLGI APPARATUS GBINDING LIPOPROTEIN MEMBRANE NUCLEOTIDE-BINDING PRENYLAPROTEIN TRANSPORT TRANSPORT YPT32 RAB GTPASE GDP VESICTRAFFICKING MYO2P EFFECTORS
Ref.: THE ACTIVATION CYCLE OF RAB GTPASE YPT32 REVEALS ST DETERMINANTS OF EFFECTOR RECRUITMENT AND GDI BINDIN FEBS LETT. V. 585 3520 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GDP A:4032;
B:4032;
Valid;
Valid;
none;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
MG A:1175;
B:1176;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3RWO 1.7 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF YPT32 IN COMPLEX WITH GDP SACCHAROMYCES CEREVISIAE GTPASES PROTEIN-GDP COMPLEX EXOCYTOSIS GOLGI APPARATUS GBINDING LIPOPROTEIN MEMBRANE NUCLEOTIDE-BINDING PRENYLAPROTEIN TRANSPORT TRANSPORT YPT32 RAB GTPASE GDP VESICTRAFFICKING MYO2P EFFECTORS
Ref.: THE ACTIVATION CYCLE OF RAB GTPASE YPT32 REVEALS ST DETERMINANTS OF EFFECTOR RECRUITMENT AND GDI BINDIN FEBS LETT. V. 585 3520 2011
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 473 families.
1 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (8)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 166 families.
1 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
50% Homology Family (246)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
19 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
27 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
36 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
40 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
41 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
45 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
47 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
49 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
57 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
61 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
78 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
81 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
84 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
85 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
87 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
88 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
91 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
92 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
93 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
94 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
97 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
99 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
101 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
102 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
104 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
109 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
112 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
114 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
118 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
124 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
126 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
127 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
130 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
133 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
134 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
135 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
138 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
140 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
145 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
150 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
151 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
152 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
153 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
154 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
155 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
156 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
157 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
158 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
163 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
164 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
165 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
168 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 1N6K - GDP AF3 n/a n/a
170 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
171 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
172 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
174 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
175 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
178 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
179 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
181 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
183 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
185 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
186 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
187 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
188 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
189 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
190 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
191 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
192 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
193 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
194 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
197 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
201 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
203 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
207 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
208 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
209 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
210 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
211 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
214 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
215 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
216 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
221 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
225 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
227 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
228 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
229 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
230 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
231 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
232 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
234 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
235 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
236 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
237 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
238 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
239 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
241 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
242 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
243 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
244 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
245 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 153
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 GNP 0.839506 0.973684
6 G 0.828947 0.986486
7 5GP 0.828947 0.986486
8 G1R 0.82716 0.986667
9 GCP 0.82716 0.973684
10 GSP 0.817073 0.948718
11 GAV 0.797619 0.961039
12 GMV 0.792683 0.973684
13 G2P 0.77381 0.961039
14 G2R 0.770115 0.961039
15 GDP MG 0.759036 0.923077
16 GP2 0.756098 0.961039
17 GDP BEF 0.75 0.9
18 GDD 0.747253 0.961039
19 GKE 0.747253 0.961039
20 GDC 0.747253 0.961039
21 GPG 0.741573 0.961039
22 G3D 0.732558 0.986486
23 ALF 5GP 0.729412 0.888889
24 Y9Z 0.728261 0.902439
25 GTP MG 0.724138 0.923077
26 BEF GDP 0.724138 0.888889
27 G5P 0.723404 0.973684
28 GFB 0.72043 0.961039
29 GTG 0.72043 0.936709
30 GDR 0.72043 0.961039
31 G4P 0.715909 0.986486
32 GCP G 0.715909 0.935065
33 6CK 0.712766 0.936709
34 G3A 0.712766 0.973684
35 GDP ALF 0.7 0.888889
36 GDP AF3 0.7 0.888889
37 YGP 0.698925 0.901235
38 JB2 0.697917 0.961039
39 GKD 0.697917 0.961039
40 GDX 0.690722 0.973684
41 GPD 0.690722 0.925
42 GMP 0.684211 0.88
43 0O2 0.666667 0.986486
44 G G 0.659574 0.935065
45 JB3 0.656863 0.948718
46 NGD 0.650485 0.961039
47 GDP 7MG 0.636364 0.911392
48 DGI 0.636364 0.923077
49 U2G 0.634615 0.936709
50 GPX 0.634409 0.946667
51 IDP 0.632184 0.972973
52 2MD 0.632075 0.891566
53 CAG 0.62963 0.880952
54 CG2 0.622642 0.936709
55 FEG 0.619048 0.879518
56 MGD 0.614679 0.891566
57 ZGP 0.613208 0.869048
58 GH3 0.612903 0.973333
59 3GP 0.611765 0.946667
60 MD1 0.607143 0.891566
61 PGD 0.59292 0.925
62 DGT 0.591398 0.923077
63 BGO 0.588785 0.924051
64 TPG 0.582609 0.840909
65 DBG 0.582609 0.948718
66 2GP 0.574713 0.96
67 FE9 0.570175 0.776596
68 I2C FE2 CMO CMO 0.566372 0.808989
69 G A A A 0.553571 0.923077
70 MGP 0.553191 0.961039
71 U A G G 0.548673 0.935065
72 G4M 0.548387 0.880952
73 6G0 0.547368 0.961039
74 G1R G1R 0.542373 0.924051
75 P2G 0.527473 0.883117
76 PGD O 0.525 0.850575
77 ADP 0.522222 0.92
78 GGM 0.517544 0.901235
79 DG 0.516484 0.910256
80 DGP 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G G U 0.509259 0.935065
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 G C 0.504348 0.9
86 GPC 0.491525 0.879518
87 G7M 0.483871 0.948052
88 6AD 0.479592 0.841463
89 ATP 0.473684 0.92
90 G2Q 0.471154 0.961039
91 U G A 0.469697 0.888889
92 5FA 0.46875 0.92
93 AQP 0.46875 0.92
94 GTA 0.468468 0.936709
95 7DD 0.468085 0.906667
96 G G G RPC 0.466102 0.875
97 SGP 0.463158 0.82716
98 01G 0.462963 0.902439
99 B4P 0.457447 0.894737
100 AP5 0.457447 0.894737
101 A2D 0.456522 0.894737
102 G G G C 0.455285 0.9125
103 ACQ 0.454545 0.896104
104 5GP 5GP 0.454545 0.883117
105 ANP 0.454545 0.896104
106 A G C C 0.451613 0.911392
107 APC G U 0.45082 0.886076
108 G U34 0.449153 0.888889
109 DG DG 0.448598 0.865854
110 ITT 0.447917 0.868421
111 BA3 0.446809 0.894737
112 35G 0.444444 0.933333
113 C2E 0.444444 0.921053
114 PCG 0.444444 0.933333
115 MGO 0.441176 0.864198
116 AN2 0.4375 0.907895
117 G C C C 0.4375 0.924051
118 M33 0.43299 0.883117
119 UCG 0.429688 0.911392
120 A G U 0.42963 0.888889
121 ACP 0.428571 0.896104
122 MGQ 0.424528 0.935897
123 7DT 0.424242 0.906667
124 APR 0.424242 0.894737
125 AR6 0.424242 0.894737
126 93A 0.42268 0.833333
127 A4P 0.420168 0.869048
128 SAP 0.42 0.873418
129 AD9 0.42 0.896104
130 AGS 0.42 0.873418
131 G8D 0.42 0.875
132 CA0 0.418367 0.896104
133 ATF 0.417476 0.884615
134 AGO 0.414634 0.888889
135 NIA 0.413043 0.82716
136 MGV 0.412844 0.890244
137 TAT 0.411765 0.884615
138 A1R 0.411215 0.839506
139 ADQ 0.411215 0.871795
140 RGT 0.410714 0.909091
141 CGP 0.409836 0.86747
142 AMP 0.408602 0.893333
143 A 0.408602 0.893333
144 UP5 0.40678 0.873418
145 C2R 0.406593 0.906667
146 AMZ 0.406593 0.918919
147 JBT 0.405882 0.778947
148 A22 0.40566 0.907895
149 25L 0.405405 0.907895
150 ADX 0.40404 0.809524
151 8OD 0.401961 0.946667
152 4TC 0.4 0.851852
153 50T 0.4 0.883117
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3RWO; Ligand: GDP; Similar sites found: 445
This union binding pocket(no: 1) in the query (biounit: 3rwo.bio3) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5MVR ADP 0.00006252 0.52923 None
2 2O66 FLC 0.007634 0.43752 None
3 1M7G ADX 0.001107 0.43359 None
4 2PEZ DAT 0.001235 0.43305 None
5 3H86 AP5 0.001669 0.43031 None
6 1M7G AV2 0.000007626 0.43028 None
7 1M7G ADP 0.001334 0.42732 None
8 2IL4 COA 0.006337 0.41778 None
9 2DT9 THR 0.02706 0.40252 None
10 1G7S GDP 0.000000002227 0.73709 1.62162
11 3A1S GDP 0.0000005725 0.62085 1.62162
12 2FAH GDP 0.0001307 0.49552 1.62162
13 4ZNL BEF ADP 0.0002749 0.49153 1.62162
14 3CV2 OXL 0.01855 0.4212 1.62162
15 1HTW ADP 0.00005994 0.42153 1.89873
16 5KUT GDP 0.00000000999 0.53604 2.1164
17 3BFV ADP 0.00003637 0.54086 2.16216
18 2ZR9 DTP 0.0001701 0.50776 2.16216
19 2P69 PLP 0.005408 0.44713 2.16216
20 3BER AMP 0.003752 0.44134 2.16216
21 5X40 ACP 0.0005809 0.4274 2.16216
22 1Y63 ADP 0.00000946 0.56975 2.17391
23 3IIJ ADP 0.00001002 0.56851 2.22222
24 4LPS GDP 0.0000000521 0.67106 2.7027
25 5GVR LMR 0.0001084 0.53861 2.7027
26 3EZ2 ADP 0.0001124 0.52344 2.7027
27 1XKV ATP 0.0001282 0.50155 2.7027
28 2FNA ADP 0.0002455 0.46402 2.7027
29 2ZPA ADP 0.0003035 0.41919 2.7027
30 4GBM A3P 0.002933 0.41502 2.7027
31 1BG2 ADP 0.0000005309 0.41462 2.7027
32 1KCC GTR 0.02781 0.40191 2.7027
33 1GOJ ADP 0.0000001086 0.70999 3.24324
34 3LRE ADP 0.0000002978 0.68537 3.24324
35 1T5C ADP 0.000001569 0.64349 3.24324
36 2ZFI ADP 0.00000881 0.57128 3.24324
37 3TBK ANP 0.0002442 0.5132 3.24324
38 1P9B GDP 0.000142 0.48856 3.24324
39 2OZE AGS 0.0001579 0.48148 3.24324
40 4IEE AGS 0.000807 0.48008 3.24324
41 2WOJ ADP ALF 0.00008082 0.46404 3.24324
42 3ZS9 ADP ALF 0.00008763 0.46129 3.24324
43 3IO3 ADP 0.00007422 0.44377 3.24324
44 3COB ADP 0.0000001934 0.43855 3.24324
45 5H68 AGS 0.000589 0.40793 3.24324
46 1X6V ADP 0.001268 0.4072 3.24324
47 2Z5F A3P 0.006996 0.40544 3.24324
48 3W68 4PT 0.037 0.40369 3.24324
49 1D2N ANP 0.002871 0.42221 3.30882
50 1SVI GDP 0.000000001351 0.77266 3.78378
51 2FH5 GTP 0.000000001596 0.69272 3.78378
52 2W58 ADP 0.000000674 0.67359 3.78378
53 3DC4 ADP 0.00000563 0.59832 3.78378
54 2QTV GNP 0.0000000412 0.59584 3.78378
55 1H65 GDP 0.00001097 0.52123 3.78378
56 2PL3 ADP 0.000173 0.51397 3.78378
57 4XTR ADP 0.00006874 0.49742 3.78378
58 1Z6T ADP 0.0002181 0.48015 3.78378
59 2VF7 ADP 0.0004819 0.47976 3.78378
60 4XTR ATP 0.0001416 0.46976 3.78378
61 4XVU ATP 0.0001506 0.46863 3.78378
62 4KBF AMP 0.001437 0.46737 3.78378
63 3ZFD ANP 0.000006462 0.46082 3.78378
64 1L2T ATP 0.0005794 0.44057 3.78378
65 1F9V ADP 0.000001731 0.42799 3.78378
66 3DCJ THH 0.006802 0.41636 3.78378
67 1JS8 MAN MAN BMA 0.02291 0.41626 3.78378
68 3VM7 GLC 0.02053 0.41576 3.78378
69 2J5V PCA 0.03757 0.40785 3.78378
70 4WS6 WBU 0.02596 0.40592 3.78378
71 3FIU POP 0.03301 0.40116 3.78378
72 1B0U ATP 0.0006228 0.46427 3.81679
73 4P83 U5P 0.01779 0.4078 3.84615
74 3U6B GDP 0.00000000009763 0.83046 4.32432
75 4J0Q GDP 0.0000000001113 0.82757 4.32432
76 3WY9 GDP 0.0000000001271 0.82465 4.32432
77 1D8T GDP 0.0000000002432 0.79651 4.32432
78 5JBQ GDP 0.0000000002574 0.79529 4.32432
79 4G5G GDP 0.0000000002786 0.79359 4.32432
80 3WYA GDP 0.0000000002892 0.79279 4.32432
81 3U6K GDP 0.000000000346 0.78894 4.32432
82 4LC1 GDP 0.000000003842 0.73729 4.32432
83 2BVN GNP 0.000000002393 0.71381 4.32432
84 4RD0 GDP 0.00000000277 0.67372 4.32432
85 4PC3 GDP 0.00000001848 0.6729 4.32432
86 1M2O GNP 0.00000001281 0.62326 4.32432
87 4PPF FLC 0.000006466 0.6138 4.32432
88 4AG5 ADP 0.000005323 0.60749 4.32432
89 4H1V GNP 0.000001859 0.57346 4.32432
90 2HCJ GDP 0.00000000006238 0.57334 4.32432
91 4P3Y GDP 0.0000000001031 0.56871 4.32432
92 1SQ5 ADP 0.0000912 0.51464 4.32432
93 3VX3 ADP 0.0000813 0.4942 4.32432
94 1U0J ADP 0.0004814 0.49144 4.32432
95 1IN4 ADP 0.0002574 0.4721 4.32432
96 5M7P ADP 0.0006556 0.45418 4.32432
97 1W5T ANP 0.001059 0.44095 4.32432
98 2X7I CIT 0.004481 0.43752 4.32432
99 1W5T ADP 0.002077 0.43601 4.32432
100 3RC3 ANP 0.008278 0.42879 4.32432
101 5G41 AP5 0.005186 0.42035 4.32432
102 3FB4 AP5 0.004113 0.41969 4.32432
103 3P4X ADP 0.00001899 0.41795 4.32432
104 4P32 ADP 0.003672 0.4142 4.32432
105 1G7C 5GP 0.00000006901 0.67532 4.86486
106 1JJ7 ADP 0.000003615 0.6293 4.86486
107 5TSH ADP 0.000006811 0.60137 4.86486
108 3E70 GDP 0.000002956 0.58647 4.86486
109 5TSH ANP 0.00001872 0.55511 4.86486
110 1OXV ANP 0.0000473 0.54249 4.86486
111 3FWY ADP 0.000009753 0.541 4.86486
112 1G3Q ADP 0.00002968 0.53815 4.86486
113 5LB3 ADP 0.00007221 0.53318 4.86486
114 1ION ADP 0.00006775 0.5146 4.86486
115 2GDJ ANP 0.0003624 0.49152 4.86486
116 2IXE ATP 0.0002288 0.46532 4.86486
117 4IOK XPO 0.002127 0.41753 4.86486
118 3FYH ADP 0.002812 0.41258 4.86486
119 5WRI A3P 0.005203 0.40777 4.86486
120 4IOK ADP 0.00214 0.40479 4.86486
121 3EWA ANP 0.00009629 0.40389 4.86486
122 2IYL GDP 0.000001443 0.61009 4.92958
123 4TTQ ATP 0.0000979 0.51961 5.11628
124 4WOP CTP 0.0009126 0.44375 5.33333
125 2QN6 GDP 0.00000000006642 0.83893 5.37634
126 2NCD ADP 0.000002239 0.6263 5.40541
127 1JWY GDP 0.0000009108 0.59491 5.40541
128 1WDT GTP 0.000000507 0.59154 5.40541
129 5L3V GDP 0.000001934 0.58738 5.40541
130 1JWY ADP 0.00003917 0.53234 5.40541
131 5I34 GDP 0.0000413 0.53123 5.40541
132 4RZ3 ADP 0.00002345 0.52382 5.40541
133 3FKQ ATP 0.00004042 0.51316 5.40541
134 5I0H ADP BEF 0.00002587 0.51067 5.40541
135 1NY5 ADP 0.0004346 0.46665 5.40541
136 5E5U MLI 0.01114 0.44494 5.40541
137 2Y65 ADP 0.000001418 0.41757 5.40541
138 4B47 GDP 0.000000000111 0.82763 5.94595
139 1KK1 GNP 0.0000000007946 0.78434 5.94595
140 2XT3 ADP 0.0000002781 0.68256 5.94595
141 4ZKD GDP 0.0000000153 0.60843 5.94595
142 4CVN ADP 0.000006022 0.5968 5.94595
143 1V8K ANP 0.00000749 0.57476 5.94595
144 1JI0 ATP 0.00004343 0.55219 5.94595
145 2XTN GTP 0.000002958 0.53957 5.94595
146 2OBM ADP 0.000224 0.52544 5.94595
147 1R6B ADP 0.00007909 0.51762 5.94595
148 3BOS CDP 0.0002078 0.50346 5.94595
149 1IHU AF3 0.0000918 0.48213 5.94595
150 5HR5 ADP 0.0002259 0.47946 5.94595
151 3FVQ ATP 0.0001455 0.47824 5.94595
152 1IHU ADP 0.0001055 0.47506 5.94595
153 4R2I ANP 0.00235 0.46206 5.94595
154 2B8W ALF 5GP 0.0002311 0.45685 5.94595
155 4U60 SIA GAL NGA 0.004496 0.45389 5.94595
156 4U60 SIA 0.004665 0.45352 5.94595
157 4YS0 ADP 0.001126 0.44799 5.94595
158 1OYY AGS 0.01147 0.41728 5.94595
159 1CR1 TTP 0.0005473 0.41701 5.94595
160 2GWH A3P 0.007155 0.41173 5.94595
161 4U60 SIA GAL BGC NGA GAL 0.0189 0.41051 5.94595
162 4Z7X 3CX 0.03285 0.40685 5.94595
163 1WRA PC 0.02447 0.4059 5.94595
164 4KFU ACP 0.00001119 0.40562 5.94595
165 1OS1 ATP 0.00164 0.40339 5.94595
166 3WXM GTP 0.00000003363 0.60649 6.26398
167 1KO8 6PG 0.000344 0.41821 6.28571
168 1VHT BA3 0.0009169 0.46127 6.42202
169 4QM7 GTP 0.00004308 0.53722 6.43275
170 2RCN GDP 0.000000000008419 0.86867 6.48649
171 2WIC GNP 0.00000002911 0.68325 6.48649
172 4NCN GTP 0.000000004359 0.65726 6.48649
173 4TMZ GSP 0.00000001337 0.63702 6.48649
174 1TQ4 GDP 0.00000003339 0.63561 6.48649
175 1SVK ALF GDP 0.00000004107 0.61307 6.48649
176 3DEF GDP 0.000001236 0.5888 6.48649
177 2OM2 GDP 0.0000006233 0.58065 6.48649
178 1TAD ALF 0.00000003112 0.57773 6.48649
179 1TAD GDP 0.00000003112 0.57773 6.48649
180 1FQK GDP 0.0000003628 0.57745 6.48649
181 1ZCB GDP 0.0000001905 0.57635 6.48649
182 1Y3A GDP 0.0000004096 0.57526 6.48649
183 1BH2 GSP 0.00000004502 0.57221 6.48649
184 4YMU ATP 0.0000341 0.54969 6.48649
185 3B9Q MLI 0.0000495 0.54087 6.48649
186 2OG2 MLI 0.00003215 0.54017 6.48649
187 4HSE ADP 0.00005197 0.52642 6.48649
188 5L3R GCP 0.00001374 0.50683 6.48649
189 4QOS ADP 0.000229 0.48967 6.48649
190 5FTB ANP 0.0002685 0.48641 6.48649
191 2C9O ADP 0.0001091 0.48365 6.48649
192 5FHD ADP ALF 0.0005066 0.45481 6.48649
193 1FQK ALF 0.006641 0.4379 6.48649
194 2BEK ATP 0.001263 0.43386 6.48649
195 3QKT ANP 0.001669 0.42183 6.48649
196 3BFX A3P 0.004914 0.41552 6.48649
197 2ZJ5 ADP 0.03108 0.40643 6.48649
198 3TK1 GDP 0.0000000002118 0.82833 7.02703
199 4U00 ADP 0.000001927 0.64553 7.02703
200 1G6H ADP 0.000004209 0.62614 7.02703
201 1CS4 GSP 0.00000002437 0.59142 7.02703
202 1AZT GSP 0.00000002793 0.57978 7.02703
203 1PUJ GNP 0.000000009483 0.55978 7.02703
204 5L3W GDP 0.000008676 0.55666 7.02703
205 4R43 GDP 0.00004977 0.53413 7.02703
206 1G41 ADP 0.00005852 0.51759 7.02703
207 4LJ9 ACP 0.0002404 0.50033 7.02703
208 5L3S GNP 0.00003129 0.49226 7.02703
209 1FNN ADP 0.0002413 0.47334 7.02703
210 4IDN GNP 0.0006349 0.44653 7.02703
211 2VVG ADP 0.0000001337 0.42784 7.02703
212 4FCW ADP 0.0001523 0.41331 7.02703
213 1T8U A3P 0.006115 0.40798 7.02703
214 2XAU ADP 0.000235 0.40614 7.02703
215 5E50 ALA TYR ASP GLU SEP TPO ASP GLU GLU 0.02007 0.40917 7.20721
216 3KTA AP5 0.0004288 0.47174 7.51445
217 1XEX ATP 0.004004 0.40336 7.55814
218 1YQT ADP 0.00001714 0.58075 7.56757
219 4NON GDP 0.000000309 0.54686 7.56757
220 3B5J 12D 0.0001156 0.53009 7.56757
221 3UIE ANP 0.00005261 0.51977 7.56757
222 5GJC ATP 0.0001105 0.51702 7.56757
223 5IRN ADP 0.00006897 0.50831 7.56757
224 5XDR ADP 0.0001334 0.50667 7.56757
225 2D2F ADP 0.0004024 0.50453 7.56757
226 5VGR GDP 0.0003516 0.4708 7.56757
227 5K5Z ANP 0.0002056 0.45892 7.56757
228 1K6M AGS 0.0007828 0.43888 7.56757
229 4GOX A3P 0.0009336 0.4357 7.56757
230 3BRE C2E 0.007524 0.43222 7.56757
231 4MKF AP5 0.003295 0.42484 7.56757
232 2QEN ADP 0.0001767 0.42462 7.56757
233 4JWX 1N4 0.01625 0.41824 7.56757
234 5IFS ADP 0.0002431 0.40596 7.56757
235 1P7T PYR 0.03777 0.40407 7.56757
236 1OFH ADP 0.000129 0.41842 8.04598
237 2AWN ADP 0.0000001583 0.71609 8.10811
238 2C78 GNP 0.000000004178 0.66616 8.10811
239 1NRJ GTP 0.0000000782 0.61963 8.10811
240 2C77 GNP 0.000000003048 0.61089 8.10811
241 5IRR GSP 0.0000005429 0.57657 8.10811
242 2DPY ADP 0.00002078 0.56883 8.10811
243 4WZ6 ATP 0.00004207 0.55863 8.10811
244 3EC1 GDP 0.000000007559 0.54591 8.10811
245 3DZD ADP 0.0004298 0.47169 8.10811
246 4XGU ADP 0.0003449 0.47117 8.10811
247 1F5N GNP 0.0001689 0.4518 8.10811
248 1LVG ADP 0.000001166 0.4389 8.10811
249 4MKG AP5 0.003873 0.4208 8.10811
250 2IZ1 ATR 0.01838 0.41475 8.10811
251 3MD0 GDP 0.0000000001965 0.81507 8.64865
252 5CK5 GDP 0.0000000007429 0.78581 8.64865
253 5GOE GDP 0.00000000665 0.70348 8.64865
254 2V7Q ADP 0.0001317 0.51324 8.64865
255 2V7Q ATP 0.0000739 0.51282 8.64865
256 3DKP ADP 0.0001712 0.50762 8.64865
257 2VB6 ADP BEF 0.0001151 0.47349 8.64865
258 5MZN ADP 0.00143 0.47328 8.64865
259 2CK3 ANP 0.0005871 0.45629 8.64865
260 4PFO ADP 0.0004605 0.44097 8.64865
261 2CK3 ADP 0.0009891 0.43466 8.64865
262 1W0J ADP 0.0001174 0.42375 8.64865
263 1W0J ADP BEF 0.0005904 0.41186 8.64865
264 2CE7 ADP 0.0001769 0.40816 8.64865
265 5J1S ATP 0.002207 0.41688 8.94309
266 2XTZ GSP 0.000000004603 0.64105 9.18919
267 4PX9 ADP 0.00003647 0.54821 9.18919
268 5J1J ANP 0.00007887 0.48031 9.18919
269 2CHG ANP 0.0003293 0.47208 9.18919
270 3KJI ADP 0.0000167 0.45628 9.18919
271 2ZTS ADP 0.0008748 0.44864 9.18919
272 2BIF ANP 0.002354 0.42282 9.18919
273 2BIF SIN 0.0041 0.42282 9.18919
274 2I4I AMP 0.009735 0.40568 9.18919
275 1W7J ADP BEF 0.00004178 0.51251 9.27152
276 1F2U ATP 0.001145 0.41963 9.45946
277 5N69 ADP 0.0001305 0.49554 9.54774
278 5FG3 GDP 0.0000000001481 0.82129 9.72973
279 4R98 GNH 0.00000006381 0.67701 9.72973
280 3VMF GTP 0.00000001966 0.61582 9.72973
281 3A4M ADP 0.00000541 0.59921 9.72973
282 1GOT GDP 0.0000004104 0.58172 9.72973
283 1GP2 GDP 0.0000006214 0.56774 9.72973
284 4E03 ADP 0.00004831 0.52795 9.72973
285 2QZ4 ADP 0.00007306 0.51305 9.72973
286 4ZG4 VO4 ADP 0.00003151 0.49687 9.72973
287 4D81 ADP 0.0001433 0.49368 9.72973
288 3W5J GDP 0.0000003374 0.67345 10.2703
289 5LTJ ADP 0.00006909 0.52045 10.2703
290 5LTJ BEF 0.0005411 0.5113 10.2703
291 2C04 GCP 0.00007548 0.50093 10.2703
292 4A4Z ANP 0.003085 0.44555 10.2703
293 5M04 GDP 0.000000001517 0.77011 10.8108
294 1D2E GDP 0.000000005338 0.69776 10.8108
295 4V03 ADP 0.00001745 0.54236 10.8108
296 2GK6 ADP 0.001491 0.47234 10.8108
297 3RLF ANP 0.0001273 0.47168 10.8108
298 3ZQ6 ADP ALF 0.00008256 0.4636 10.8108
299 1YTM ATP 0.0004083 0.45886 10.8108
300 2Q2Y ADP 0.001133 0.44343 11.8919
301 2Q2Y MKR 0.001108 0.44268 11.8919
302 2HF9 GSP 0.00000009208 0.6323 12.4324
303 1JJV ATP 0.00005516 0.55068 12.4324
304 1FP6 ADP 0.00004368 0.51745 12.4324
305 4WZA ADP 0.000604 0.47255 12.4324
306 4WZA ACP 0.000604 0.47255 12.4324
307 5MEX PAP 0.009508 0.40282 12.4324
308 1D8C GLV 0.03779 0.40024 12.4324
309 3DGY 2GP 0.01897 0.41638 13.4021
310 2IS6 ADP 0.0001185 0.51551 13.5135
311 1NJF AGS 0.0002507 0.43649 13.5135
312 1NJF ADP 0.0001442 0.43288 13.5135
313 2KIN ADP 0.0000005799 0.41357 13.5135
314 4HI0 GDP 0.0000001543 0.60687 14.0541
315 4BAS GNP 0.0000000595 0.5728 14.0541
316 4YDS ATP 0.00002859 0.56163 14.0541
317 1GXU 2HP 0.00004815 0.54558 14.2857
318 3ZIA ATP 0.00008857 0.51525 14.5946
319 3ZIA ADP 0.0002043 0.48658 14.5946
320 5H67 ATP 0.002958 0.44173 14.5946
321 2WJG GDP 0.0000000005359 0.77956 15.1351
322 2WHX ADP 0.00006786 0.54807 15.1351
323 2JLR ANP 0.0006899 0.46222 15.1351
324 5H56 ADP 0.00201 0.42153 15.1351
325 5H56 TYD 0.00201 0.42153 15.1351
326 3B7G ANP 0.0001927 0.49897 15.6757
327 1DAR GDP 0.000000003435 0.7397 16.2162
328 2GJ8 ALF GDP 0.00000007672 0.58176 16.2791
329 1BO4 COA 0.007844 0.42548 16.6667
330 5HCN GCP 0.000000004843 0.72082 16.7568
331 1KK8 BEF ADP 0.00002266 0.52449 16.7568
332 1B7T ADP 0.00008762 0.50933 16.7568
333 4KVA GTP 0.00004158 0.40757 16.7568
334 2WJH GDP 0.000000003797 0.55603 16.8675
335 2WJH FLC 0.000001109 0.48299 16.8675
336 1SKQ GDP 0.0000000008331 0.7833 17.2973
337 2CBZ ATP 0.000002031 0.64406 17.2973
338 4OHY ANP 0.0013 0.42625 17.2973
339 4BQS ADP 0.0000909 0.5212 17.6136
340 1G6O ADP 0.0001689 0.4959 17.8378
341 3Q9L ATP 0.0002457 0.47782 17.8378
342 4OI4 ATP 0.005202 0.40466 18.2609
343 5EE5 GTP 0.0000000008127 0.69629 21.0526
344 1UPT GTP 0.00000000607 0.65928 21.0526
345 1ZJ6 G3D 0.000000001789 0.74168 21.0811
346 4LYA ATP 0.00005523 0.52514 21.0811
347 1F6B GDP 0.00000001382 0.69885 21.6216
348 3T34 GDP 0.00001022 0.5172 22.1622
349 2X77 GDP 0.000000003212 0.72942 23.2804
350 3AQ4 GDP 0.000000002299 0.73643 23.3696
351 5KSP GDP 0.0000001064 0.6561 24.3243
352 5KSZ GCP 0.0000006501 0.60969 24.3243
353 3CNL GNP 0.000000002143 0.76251 25.4054
354 5DI3 GNP 0.0000000009294 0.69382 25.4054
355 4M9Q GNP 0.000000001718 0.68251 25.4054
356 3T12 GDP ALF 0.00000005615 0.61833 25.9459
357 1WF3 GNP 0.00000011 0.58846 25.9459
358 3T1O GDP 0.00000003018 0.53719 25.9459
359 1FQJ GDP 0.0000001634 0.59185 26.1905
360 1FQJ ALF 0.003263 0.45719 26.1905
361 3DOE GTP 0.000000001795 0.67327 28.1081
362 1KSH GDP 0.0000000008266 0.6298 28.1081
363 1YZG GDP 0.000000001787 0.56046 30.1676
364 1QHG ATP 0.007411 0.41464 30.2703
365 2A5F GTP 0.00000001957 0.62288 30.2857
366 4ZI2 GNP 0.000000002805 0.67349 31.3514
367 4GOJ GNP 0.000000001505 0.63223 31.3514
368 1FZQ GDP 0.0000000009879 0.76643 31.4917
369 4KAX GTP 0.000000002725 0.62266 31.9527
370 3PCR GTP 0.00000001784 0.63183 32.0988
371 3REF GDP 0.0000000163 0.64109 32.4324
372 3N5C GDP 0.000000001282 0.76085 32.716
373 2W83 GTP 0.000000006438 0.65022 32.7273
374 2ZEJ GDP 0.0000007796 0.54191 34.2391
375 1S9D GDP 0.000000003116 0.73006 35.3659
376 1RE0 GDP 0.0000000007593 0.54899 35.3659
377 1O3Y GTP 0.00000001054 0.64133 35.5422
378 2J59 GTP 0.00000001263 0.63806 35.5422
379 1J2J GTP 0.00000001381 0.63644 35.5422
380 1MR3 G3D 0.000000001855 0.56125 36.4641
381 4V0K GDP 0.0000002591 0.57715 37.2781
382 1ZD9 GDP 0.0000000002897 0.7347 37.2973
383 1R4A GNP 0.0000000024 0.66004 38.7879
384 4YLG GDP 0.000000005306 0.68818 39.3064
385 1I4D GDP 0.000000000197 0.81502 41.6216
386 5JCP GDP ALF 0.000000009111 0.67759 41.6216
387 1OW3 GDP 0.000000004865 0.58302 41.6216
388 4XSH GSP 0.00000001142 0.66427 41.8994
389 3LXR GDP 0.000000002444 0.72397 42.1622
390 1E96 GTP 0.0000000007407 0.67279 42.1622
391 2W2X GSP 0.000000002447 0.61558 42.1622
392 4D0N GDP 0.0000000002686 0.56878 42.1622
393 2VOH CIT 0.02428 0.40858 42.3077
394 1TX4 ALF GDP 0.0000000106 0.64122 42.3729
395 1G4U GDP 0.00000002214 0.65156 42.3913
396 1G4U AF3 0.005255 0.44778 42.3913
397 2NGR GDP 0.0000000006023 0.76448 42.7027
398 4DID GDP 0.0000000007703 0.75933 42.7027
399 2WMO GTP 0.00000000242 0.72416 42.7027
400 1GRN GDP 0.000000001717 0.71027 42.7027
401 4ITR GDP 0.000000009974 0.58151 42.7027
402 1DS6 GDP 0.0000000001907 0.57572 42.7027
403 2NGR AF3 0.0002525 0.51245 42.7027
404 1GRN AF3 0.0004749 0.49818 42.7027
405 1CXZ GSP 0.000000004454 0.61538 42.8571
406 5HPY GDP 0.000000002144 0.70593 43.2432
407 2FJU GSP 0.000000005053 0.60377 43.2584
408 4XOI GTP 0.000000002792 0.65736 43.3333
409 4YC7 GNP 0.000000001634 0.63245 43.6464
410 1HE1 GDP 0.00000001794 0.64729 43.75
411 1HE1 AF3 0.006281 0.43982 43.75
412 5IRC GDP 0.00000002904 0.67331 43.7838
413 1NF3 GNP 0.00000001027 0.6271 45.4054
414 3WYG GTP 0.0000000001172 0.67699 45.6044
415 3M1I GTP 0.0000000001105 0.70906 45.9459
416 3WYF GTP 0.0000000001388 0.70815 45.9459
417 3GJ7 GDP 0.0000000002715 0.79415 46.4865
418 3GJ4 GDP 0.0000000003098 0.79132 46.4865
419 3GJ8 GDP 0.0000000004778 0.76933 46.4865
420 3GJ5 GDP 0.0000000005767 0.76539 46.4865
421 3GJ0 GDP 0.0000000002699 0.79427 47.027
422 5BXQ GDP 0.000000000261 0.78199 47.027
423 3CH5 GDP 0.0000000006388 0.76325 47.027
424 5UWT GNP 0.00000000006347 0.71875 47.027
425 5UWQ GNP 0.00000000004319 0.7071 47.027
426 5UWW GNP 0.00000000004757 0.70519 47.027
427 5UWU GNP 0.00000000005015 0.70469 47.027
428 5DIF GNP 0.00000000005307 0.70358 47.027
429 5UWO GNP 0.00000000005537 0.70288 47.027
430 5UWI GNP 0.00000000005696 0.70256 47.027
431 5UWR GNP 0.00000000006171 0.70116 47.027
432 5UWJ GNP 0.0000000000628 0.70075 47.027
433 5UWH GNP 0.00000000006776 0.69962 47.027
434 5DHF GNP 0.00000000007217 0.69854 47.027
435 1IBR GNP 0.0000000001085 0.69194 47.027
436 5UWP GNP 0.00000000005842 0.68812 47.027
437 4HAT GNP 0.0000000000609 0.6873 47.027
438 5UWS GNP 0.00000000007135 0.68482 47.027
439 5DI9 GNP 0.00000000009432 0.68058 47.027
440 3GJ3 GDP 0.0000000002893 0.57318 47.027
441 3GJX GTP 0.0000000002497 0.69482 47.5676
442 2A9K GDP 0.0000000001174 0.6372 48.6486
443 1WA5 GTP 0.0000000002531 0.63046 49.4318
444 5TB5 GDP 0.00000000004845 0.80421 49.7297
445 5TAR GDP 0.00000000009777 0.77781 49.7297
Pocket No.: 2; Query (leader) PDB : 3RWO; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3rwo.bio3) has 20 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 3RWO; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 3rwo.bio1) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 3RWO; Ligand: GDP; Similar sites found: 14
This union binding pocket(no: 4) in the query (biounit: 3rwo.bio2) has 20 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2JFV FLC 0.01919 0.40597 2.7027
2 1UKZ ADP 0.008237 0.42198 3.24324
3 1XX6 ADP 0.0003616 0.43547 4.86486
4 1RRC ADP 0.00005708 0.42326 4.86486
5 3IUY AMP 0.003587 0.40471 4.86486
6 2PZE ATP 0.00006503 0.42236 5.40541
7 2ZPT A3P 0.04626 0.40208 5.94595
8 3QDK QDK 0.01635 0.41308 7.02703
9 1R0X ATP 0.001293 0.40737 7.56757
10 1K4M CIT 0.03276 0.40506 7.56757
11 1V47 ADX 0.009269 0.40357 8.10811
12 4IHQ ADP 0.0001067 0.4477 10.2703
13 4K7O EKZ 0.01676 0.4083 11.3095
14 4JLV ADP 0.0007081 0.41973 21.6216
Feedback