Receptor
PDB id Resolution Class Description Source Keywords
3VSE 2.1 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF METHYLTRANSFERASE STAPHYLOCOCCUS AUREUS ROSSMANN FOLD METHYLTRANSFERASE TRANSFERASE
Ref.: CRYSTAL STRUCTURE OF A PUTATIVE METHYLTRANSFERASE S FROM STAPHYLOCOCCUS AUREUS PROTEIN PEPT.LETT. V. 20 530 2012
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SAH C:401;
D:401;
A:401;
B:401;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
384.411 C14 H20 N6 O5 S c1nc(...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3VSE 2.1 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF METHYLTRANSFERASE STAPHYLOCOCCUS AUREUS ROSSMANN FOLD METHYLTRANSFERASE TRANSFERASE
Ref.: CRYSTAL STRUCTURE OF A PUTATIVE METHYLTRANSFERASE S FROM STAPHYLOCOCCUS AUREUS PROTEIN PEPT.LETT. V. 20 530 2012
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 3VSE - SAH C14 H20 N6 O5 S c1nc(c2c(n....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 3VSE - SAH C14 H20 N6 O5 S c1nc(c2c(n....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 3VSE - SAH C14 H20 N6 O5 S c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SAH; Similar ligands found: 197
No: Ligand ECFP6 Tc MDL keys Tc
1 SAH 1 1
2 5X8 0.759494 0.969697
3 A7D 0.734177 0.926471
4 TT8 0.709302 0.970588
5 SXZ 0.692308 0.916667
6 DSH 0.692308 0.914286
7 DTA 0.666667 0.857143
8 3DH 0.662338 0.869565
9 S8M 0.655556 0.901408
10 SFG 0.635294 0.954545
11 SA8 0.62069 0.915493
12 EEM 0.617977 0.890411
13 MTA 0.615385 0.869565
14 SAI 0.613636 0.955882
15 S7M 0.586957 0.916667
16 36A 0.586538 0.90411
17 K15 0.583333 0.878378
18 RAB 0.573333 0.84058
19 ADN 0.573333 0.84058
20 XYA 0.573333 0.84058
21 62X 0.572917 0.855263
22 5CD 0.571429 0.852941
23 0UM 0.5625 0.876712
24 5N5 0.558442 0.84058
25 A4D 0.551282 0.867647
26 SAM 0.537634 0.916667
27 SSA 0.536842 0.712644
28 SMM 0.536842 0.88
29 KB1 0.534653 0.902778
30 A5D 0.532609 0.857143
31 SIB 0.53125 0.928571
32 EP4 0.530864 0.819444
33 DSZ 0.530612 0.732558
34 GSU 0.53 0.752941
35 AMP 0.529412 0.763158
36 A 0.529412 0.763158
37 5CA 0.525773 0.712644
38 ME8 0.524752 0.8125
39 M2T 0.52439 0.821918
40 6RE 0.523256 0.824324
41 GJV 0.522727 0.813333
42 AAT 0.515789 0.863014
43 LSS 0.515152 0.696629
44 KAA 0.514852 0.727273
45 J7C 0.511364 0.835616
46 A5A 0.510417 0.697674
47 SON 0.505495 0.805195
48 SRP 0.505155 0.805195
49 5AL 0.5 0.779221
50 VMS 0.5 0.681818
51 KH3 0.5 0.866667
52 ADX 0.5 0.694118
53 CA0 0.5 0.769231
54 AMP MG 0.5 0.74359
55 AMO 0.5 0.805195
56 54H 0.5 0.681818
57 AHX 0.49505 0.753086
58 TSB 0.494949 0.689655
59 53H 0.494949 0.674157
60 G5A 0.494737 0.712644
61 A2D 0.494382 0.74359
62 ABM 0.494382 0.74359
63 ZAS 0.494253 0.808219
64 A6D 0.490196 0.759494
65 8QN 0.49 0.779221
66 GEK 0.49 0.956522
67 GAP 0.489583 0.769231
68 A3S 0.48913 0.884058
69 AN2 0.48913 0.734177
70 S4M 0.488889 0.831169
71 SRA 0.488636 0.746835
72 LAD 0.485437 0.810127
73 52H 0.484848 0.674157
74 A12 0.483516 0.759494
75 BA3 0.483516 0.74359
76 AP2 0.483516 0.759494
77 AOC 0.483146 0.842857
78 NEC 0.483146 0.788732
79 Y3J 0.481481 0.768116
80 NVA LMS 0.480392 0.696629
81 VRT 0.479167 0.861111
82 50T 0.478723 0.734177
83 5AS 0.478261 0.655556
84 B4P 0.478261 0.74359
85 ADP 0.478261 0.74359
86 AP5 0.478261 0.74359
87 A3N 0.477778 0.830986
88 YSA 0.476636 0.712644
89 XAH 0.476636 0.768293
90 0XU 0.473684 0.897059
91 WAQ 0.471154 0.807692
92 NSS 0.470588 0.712644
93 5AD 0.468354 0.791045
94 ADP MG 0.468085 0.734177
95 AU1 0.468085 0.725
96 M33 0.468085 0.734177
97 MAO 0.467391 0.797468
98 TXA 0.466667 0.759494
99 A3G 0.466667 0.871429
100 NB8 0.466667 0.775
101 3AM 0.465909 0.727273
102 DAL AMP 0.465347 0.779221
103 ATP 0.463158 0.74359
104 ADP BEF 0.463158 0.716049
105 A3T 0.463158 0.842857
106 BEF ADP 0.463158 0.716049
107 ACP 0.463158 0.746835
108 7D7 0.4625 0.785714
109 LEU LMS 0.461538 0.677778
110 APC 0.458333 0.759494
111 AQP 0.458333 0.74359
112 APR 0.458333 0.766234
113 PRX 0.458333 0.746835
114 AR6 0.458333 0.766234
115 5FA 0.458333 0.74359
116 IOT 0.456897 0.761905
117 4AD 0.456311 0.794872
118 PAJ 0.456311 0.722892
119 WSA 0.45614 0.72093
120 FA5 0.453704 0.805195
121 YAP 0.453704 0.794872
122 RBY 0.453608 0.782051
123 ADV 0.453608 0.782051
124 ADP PO3 0.453608 0.763158
125 AD9 0.453608 0.725
126 SAP 0.453608 0.728395
127 AGS 0.453608 0.728395
128 PTJ 0.45283 0.731707
129 MHZ 0.452632 0.797468
130 00A 0.451923 0.740741
131 A3P 0.451613 0.74026
132 YLP 0.451327 0.771084
133 7MD 0.45045 0.768293
134 ALF ADP 0.45 0.707317
135 ADP ALF 0.45 0.707317
136 ATP MG 0.44898 0.734177
137 2VA 0.447917 0.819444
138 OOB 0.446602 0.779221
139 ANP 0.444444 0.725
140 ACQ 0.444444 0.746835
141 TAT 0.444444 0.7375
142 P5A 0.443396 0.719101
143 7D5 0.443182 0.708861
144 ARG AMP 0.442478 0.759036
145 A1R 0.442308 0.7625
146 YLC 0.439655 0.790123
147 2AM 0.438202 0.717949
148 DLL 0.438095 0.779221
149 A22 0.436893 0.734177
150 D3Y 0.436893 0.859155
151 TYR AMP 0.436364 0.782051
152 ATF 0.435644 0.716049
153 MYR AMP 0.435185 0.746988
154 SO8 0.434343 0.808219
155 3UK 0.433962 0.769231
156 OAD 0.433962 0.769231
157 TAD 0.433628 0.765432
158 25A 0.432692 0.74359
159 ANP MG 0.431373 0.707317
160 VO4 ADP 0.431373 0.734177
161 ADP VO4 0.431373 0.734177
162 9SN 0.431193 0.731707
163 TYM 0.431034 0.805195
164 PR8 0.429907 0.8
165 ADQ 0.428571 0.746835
166 YLB 0.42735 0.771084
167 3OD 0.425926 0.769231
168 FYA 0.425926 0.779221
169 1ZZ 0.425926 0.746988
170 PPS 0.425743 0.674419
171 NVA 2AD 0.424242 0.808219
172 MAP 0.423077 0.707317
173 A2P 0.421053 0.727273
174 4YB 0.421053 0.735632
175 ADP BMA 0.420561 0.746835
176 5SV 0.419048 0.731707
177 3NZ 0.416667 0.824324
178 YLA 0.416667 0.771084
179 48N 0.413793 0.753086
180 LPA AMP 0.413793 0.768293
181 AYB 0.413223 0.761905
182 QQY 0.413043 0.696203
183 ACK 0.413043 0.710526
184 JB6 0.412844 0.7625
185 BIS 0.412844 0.719512
186 PAP 0.41 0.730769
187 OVE 0.408602 0.7125
188 4UV 0.40708 0.75
189 AMP DBH 0.40708 0.746835
190 3AD 0.406977 0.852941
191 AF3 ADP 3PG 0.40678 0.743902
192 OMR 0.40678 0.738095
193 LAQ 0.405172 0.768293
194 A A 0.40367 0.74359
195 7C5 0.403509 0.789474
196 7MC 0.403361 0.75
197 4UU 0.4 0.75
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3VSE; Ligand: SAH; Similar sites found: 293
This union binding pocket(no: 1) in the query (biounit: 3vse.bio3) has 17 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1RJD SAM 0.001725 0.40633 1.1976
2 3F8D FAD 0.02768 0.42984 1.23839
3 3QOX SAH 0.00001288 0.45228 1.25628
4 2EG5 SAH 0.00006811 0.48751 1.34409
5 1BC5 SAH 0.0005423 0.40152 1.48699
6 5MW4 5JU 0.00005312 0.54978 1.49701
7 5G3U FDA 0.001947 0.46806 1.50754
8 1BZL FAD 0.009861 0.46427 1.50754
9 2EFJ SAH 0.0001154 0.45901 1.50754
10 5G3U ITW 0.01652 0.42637 1.50754
11 2Q28 ADP 0.0011 0.403 1.50754
12 5KKA 6V0 0.02069 0.40971 1.60256
13 3TKY SAH 0.001355 0.45072 1.63043
14 1YXM ADE 0.007725 0.42238 1.65016
15 1N2X SAM 0.00002428 0.44906 1.66113
16 1XHL NDP 0.01647 0.41467 1.6835
17 2AOT SAH 0.0004066 0.46851 1.71233
18 3NDJ JHZ 0.003172 0.46517 1.75879
19 5EOW FAD 0.02545 0.40736 1.75879
20 1NV8 MEQ 0.000004689 0.44211 1.76056
21 1NV8 SAM 0.000005146 0.43489 1.76056
22 5FA8 SAM 0.000003621 0.46522 1.86335
23 1ZPT FAD 0.03214 0.40615 1.97368
24 5JAQ NAI 0.002832 0.46089 2.01005
25 5T67 JHZ 0.004111 0.45846 2.01005
26 5T67 SAH 0.003385 0.45799 2.01005
27 5U8U FAD 0.009554 0.4519 2.01005
28 3O7W SAM 0.00196 0.42442 2.01005
29 1IM8 SAI 0.000001093 0.5037 2.04918
30 1UAY ADN 0.003149 0.41491 2.06612
31 1WG8 SAM 0.000008403 0.56458 2.10526
32 5XVK SAH 0.0005826 0.47397 2.11268
33 4DCM SAM 0.000001653 0.54536 2.13333
34 3PT9 SAH 0.0000003824 0.54249 2.26131
35 3SSO SAH 0.00007845 0.4428 2.26131
36 4N49 SAM 0.00008299 0.44178 2.26131
37 2AE2 NAP 0.009689 0.4347 2.30769
38 2AE2 PTO 0.009689 0.4347 2.30769
39 4PNE SAH 0.0001322 0.50489 2.31788
40 1R6D NAD 0.01877 0.42965 2.37389
41 1R6D DAU 0.0186 0.42913 2.37389
42 5F8F SFG 0.0001463 0.46366 2.38727
43 1KPH SAH 0.0007384 0.40016 2.43902
44 5XLX SAH 0.001819 0.44264 2.48227
45 1V5F FAD 0.002442 0.48289 2.51256
46 3OND ADN 0.01176 0.43651 2.51256
47 1X87 NAD 0.0001353 0.41938 2.51256
48 1LVL NAD 0.0004765 0.41077 2.51256
49 5MGZ SAH 0.00000453 0.49498 2.54237
50 3GGO ENO 0.0456 0.40177 2.54777
51 1PN0 IPH 0.0002705 0.52243 2.55639
52 1PN0 FAD 0.0002588 0.52243 2.55639
53 4Y2H SAH 0.00007013 0.54237 2.55682
54 4Y2H 49K 0.0001035 0.53379 2.55682
55 5ULP KB1 0.000004337 0.45742 2.61194
56 5CUQ NSC 0.00001864 0.56099 2.62172
57 3TLJ SAH 0.000003646 0.46719 2.68097
58 1FP1 SAH 0.0009057 0.43097 2.68817
59 3GRU AMP 0.0002321 0.41143 2.71186
60 5F2K OCA 0.01101 0.42341 2.71739
61 5F2K SAH 0.01101 0.42341 2.71739
62 1XTP SAI 0.00006468 0.45906 2.75591
63 3X0D SAH 0.000003033 0.50337 2.76382
64 3ICR FAD 0.0003778 0.50285 2.76382
65 4RPL 3UC 0.002536 0.48403 2.76382
66 5JJR SAH 0.00001818 0.47925 2.76382
67 4RPL FAD 0.00338 0.47536 2.76382
68 2YVF NAD 0.004 0.4701 2.76382
69 2YVF FAD 0.003881 0.4701 2.76382
70 5X62 SAH 0.0001212 0.45708 2.76382
71 2C31 TZD 0.01238 0.44938 2.76382
72 2C31 ADP 0.01209 0.44938 2.76382
73 2IZ1 ATR 0.0078 0.42152 2.76382
74 3ICT ADP 0.006703 0.40747 2.76382
75 3ICS ADP 0.009709 0.40008 2.76382
76 3OFK SAH 0.000227 0.41902 2.77778
77 4RDI ATP 0.006213 0.41752 2.77778
78 4RDH AMP 0.004407 0.40354 2.77778
79 1TPY SAH 0.0006971 0.40058 2.78746
80 1I9G SAM 0.00003631 0.45524 2.85714
81 3ZNN FAD 0.02498 0.42511 2.88184
82 2HNK SAH 0.0001014 0.44365 2.92887
83 1XDS SAM 0.00079 0.44209 2.94118
84 1QZZ SAM 0.002298 0.42158 2.94118
85 1CF2 NAP 0.008215 0.42322 2.96736
86 3LCC SAH 0.00001589 0.49239 2.97872
87 3I53 SAH 0.0008807 0.40387 3.01205
88 3CBG SAH 0.00009778 0.46439 3.01724
89 2PZM UDP 0.02973 0.41229 3.0303
90 4TXJ THM 0.01763 0.41083 3.04054
91 1R18 SAH 0.000004203 0.47385 3.0837
92 1L3I SAH 0.0000194 0.42578 3.125
93 4J7U NAP 0.03081 0.41065 3.125
94 4J7U YTZ 0.03081 0.41065 3.125
95 1KPG SAH 0.0005732 0.40302 3.13589
96 1ZQ9 SAM 0.0004418 0.42993 3.15789
97 1G0N PHH 0.01968 0.41984 3.18021
98 1G0N NDP 0.02479 0.41193 3.18021
99 4YSX FAD 0.00414 0.45354 3.20513
100 4BV6 FAD 0.0005855 0.49789 3.24544
101 4FC7 COA 0.003657 0.45827 3.2491
102 5DNK SAH 0.00003058 0.50569 3.26633
103 4KRI SAH 0.000004896 0.47916 3.26633
104 4X9M FAD 0.001611 0.47441 3.26633
105 3EVG SAH 0.000009779 0.48981 3.27273
106 5KOK SAH 0.0001192 0.50062 3.27456
107 5KOK S9T 0.0008173 0.48221 3.27456
108 5KOK R9T 0.004159 0.44568 3.27456
109 1KYZ SAH 0.003222 0.40331 3.28767
110 3GDH SAH 0.0000002394 0.49751 3.3195
111 4ONQ SFG 0.0002348 0.43779 3.36134
112 5BW4 SAM 0.000005802 0.55716 3.37079
113 3EGI ADP 0.0000002037 0.64512 3.39806
114 5GT9 NAP 0.02247 0.40677 3.42205
115 5MX4 HPA 0.01563 0.40608 3.43348
116 4YAG NAI 0.00363 0.45844 3.46021
117 1E1M FAD 0.001804 0.48307 3.47826
118 1L1E SAH 0.0005345 0.41055 3.48432
119 4FK7 P34 0.00603 0.42556 3.49345
120 5M67 ADE 0.01424 0.43296 3.51759
121 5M67 3D1 0.01832 0.42725 3.51759
122 5M67 NAD 0.02013 0.42511 3.51759
123 2WSB NAD 0.005175 0.4486 3.54331
124 3LCV SAM 0.004354 0.432 3.55872
125 4M73 SAH 0.000003598 0.60318 3.56083
126 3G89 SAM 0.0000234 0.50612 3.61446
127 3DMH SAM 0.000002762 0.49252 3.67454
128 3DMH GMP 0.00000226 0.4495 3.67454
129 3FUU ADN 0.0001305 0.44128 3.69004
130 2VT3 ATP 0.007178 0.40611 3.72093
131 5DX1 SFG 0.00005913 0.52568 3.72493
132 5DWQ SFG 0.00007133 0.51978 3.72493
133 5DX0 SFG 0.00009006 0.51683 3.72493
134 5DX8 SFG 0.00005826 0.43301 3.72493
135 5DXA SFG 0.00007122 0.43047 3.72493
136 3T7S SAM 0.0000365 0.52245 3.73134
137 1F3L SAH 0.00003074 0.44677 3.73832
138 2R4J 13P 0.008343 0.44744 3.76884
139 3C3Y SAH 0.0003102 0.42976 3.79747
140 4MO2 FDA 0.001258 0.4765 3.80435
141 1JG3 ADN 0.00001082 0.48635 3.82979
142 3GU3 SAH 0.000106 0.49642 3.87324
143 4A6D SAM 0.000647 0.41571 3.96601
144 2Q1S NAI 0.009872 0.43705 3.97878
145 3LXD FAD 0.0009433 0.48037 4.0201
146 5MBX SP5 0.002764 0.47416 4.0201
147 5MBX FAD 0.002764 0.47416 4.0201
148 4D7E FAD 0.001954 0.4657 4.0201
149 1V59 NAD 0.0005442 0.45746 4.0201
150 3S1S SAH 0.00004514 0.43119 4.0201
151 2V3V MGD 0.04003 0.4216 4.0201
152 3TKA SAM 0.00007973 0.44001 4.03458
153 1U2Z SAH 0.00001993 0.54434 4.15704
154 4FZV SAM 0.000005266 0.56725 4.17827
155 3C6K MTA 0.00001458 0.57264 4.19948
156 3C6K SPD 0.00001038 0.40248 4.19948
157 5J60 FAD 0.008633 0.43726 4.375
158 3ML1 MGD 0.02549 0.43179 4.44444
159 3U31 NAD 0.0004148 0.4103 4.48276
160 1UWK NAD 0.0001563 0.53166 4.52261
161 3NTD FAD 0.0004906 0.49834 4.52261
162 3CH6 NAP 0.0374 0.41821 4.54545
163 2A14 SAH 0.000798 0.40219 4.56274
164 5E1M PRO PRO LYS ARG ILE ALA 0.0000623 0.53805 4.56432
165 5E1M SAH 0.0000623 0.53805 4.56432
166 3LST SAH 0.0006549 0.44529 4.5977
167 2PWY SAH 0.00006469 0.43098 4.65116
168 5KVA SAM 0.0002756 0.48761 4.67626
169 3MB5 SAM 0.0000794 0.43091 4.70588
170 1DL5 SAH 0.00001727 0.426 4.73186
171 3FRH SAH 0.004663 0.43056 4.74308
172 1KYQ NAD 0.003641 0.40041 4.74453
173 1ZGA SAH 0.002968 0.41672 4.7619
174 2EJU SAH 0.00000004041 0.57662 4.77387
175 2XYQ SAH 0.0006866 0.42531 4.91803
176 1G60 SAM 0.000002303 0.5028 5
177 1NW5 SAM 0.000001478 0.50677 5.01567
178 3BXO SAM 0.00008289 0.48404 5.02092
179 5MPT SAH 0.0001479 0.44905 5.02513
180 4UCI SAM 0.004776 0.42482 5.02513
181 5XVQ SAH 0.0006182 0.4002 5.02513
182 5FTW SAH 0.00004718 0.45015 5.07812
183 1DXY COI 0.019 0.40253 5.1051
184 4BLW SAH 0.0000391 0.41766 5.19031
185 1MO9 FAD 0.004367 0.47729 5.27638
186 1MO9 KPC 0.006278 0.46923 5.27638
187 5FJN FAD 0.005085 0.45093 5.27638
188 5FJN BE2 0.00575 0.45093 5.27638
189 3M6W SAM 0.001346 0.42225 5.27638
190 1I1N SAH 0.000001815 0.44389 5.30973
191 1WY7 SAH 0.00002364 0.44867 5.31401
192 5GM1 SAH 0.0001677 0.42049 5.38721
193 2FAV APR 0.01308 0.41194 5.55556
194 2O07 MTA 0.00003218 0.41492 5.59211
195 2O07 SPD 0.00003803 0.40228 5.59211
196 4KIB SAH 0.0000007713 0.59811 5.60224
197 4IWN GEK 0.00004738 0.52629 5.67686
198 5FA5 MTA 0.00007513 0.47457 5.72207
199 3D3W NAP 0.008673 0.42975 5.7377
200 1VMK GUN 0.009006 0.4172 5.77617
201 5K7U SAM 0.0001282 0.4512 5.77778
202 3MQ2 SAH 0.0001351 0.45424 5.9633
203 3FZG SAM 0.003284 0.40634 6
204 5LOG SAH 0.0001069 0.50287 6.00858
205 3UCL FAD 0.002886 0.4797 6.03015
206 4REP FAD 0.002484 0.46378 6.03015
207 4AZT SAM 0.00008455 0.45436 6.03015
208 2ZFU SAH 0.00003408 0.4506 6.04651
209 2ZIF SAM 0.000002192 0.50265 6.06061
210 1NVM NAD 0.01111 0.42438 6.08696
211 5X20 NAD 0.01156 0.41456 6.08974
212 2VDV SAM 0.000002308 0.55089 6.09756
213 1EJ0 SAM 0.0001434 0.44909 6.11111
214 5IL1 SAM 0.0004907 0.42798 6.13208
215 4X7Y SAH 0.007351 0.44179 6.20438
216 3P2E SAH 0.00009648 0.43548 6.22222
217 2PT9 S4M 0.000002598 0.46007 6.23053
218 2PT9 2MH 0.000005316 0.40483 6.23053
219 3CGD FAD 0.001502 0.50192 6.28141
220 3CGD COA 0.001502 0.50192 6.28141
221 3QPB URA 0.01674 0.4052 6.38298
222 1LSS NAD 0.0000306 0.4516 6.42857
223 2QQF A1R 0.001076 0.46462 6.49351
224 4POO SAM 0.000028 0.43806 6.5
225 4OBW SAM 0.00011 0.4496 6.61479
226 4QTU SAM 0.00000774 0.48543 6.66667
227 1G8K MGD 0.006803 0.46166 6.76692
228 4C4A SAH 0.000001715 0.51049 6.78392
229 5JCA FAD 0.003003 0.46266 6.78392
230 5JCA NDP 0.005578 0.46242 6.78392
231 4KRG SAH 0.00008249 0.46229 6.78392
232 4NEC SAH 0.00005121 0.48207 6.81818
233 4XUC SAM 0.00002227 0.56036 6.88073
234 4XUC 43G 0.00002227 0.56036 6.88073
235 5JE0 SAH 0.00001457 0.56459 6.88259
236 5JE0 AZ8 0.00001457 0.56459 6.88259
237 3H2B SAH 0.0001167 0.44296 6.89655
238 5JGL SAM 0.0009705 0.45328 6.92042
239 4R6W SAH 0.00001383 0.40594 6.97674
240 4OPC FDA 0.004257 0.48497 7.03518
241 1Z3C SA8 0.000007464 0.4183 7.04698
242 2I7C AAT 0.000004693 0.40512 7.06714
243 1FP2 SAH 0.03115 0.40394 7.10227
244 5N53 8NB 0.01214 0.41173 7.17949
245 4USR FAD 0.000792 0.48157 7.20222
246 2FK8 SAM 0.0004987 0.41077 7.2327
247 1Y8Q ATP 0.0001522 0.41019 7.28643
248 3A4T SFG 0.000003617 0.47757 7.29927
249 1QAN SAH 0.00000439 0.47708 7.37705
250 1ELI PYC 0.0004969 0.49806 7.53769
251 2P41 SAH 0.000017 0.4816 7.54098
252 3BGD SAH 0.000004338 0.46694 7.69231
253 3BGD PM6 0.000006534 0.43319 7.69231
254 3DXY SAM 0.00007848 0.49597 7.79817
255 5M58 SAH 0.00004213 0.52198 7.82609
256 5E9W SAH 0.00006555 0.49955 8.01282
257 3NJ4 AFX 0.03934 0.43668 8.0402
258 3NJ4 NAD 0.03934 0.43668 8.0402
259 4LWP SAH 0.000005111 0.56257 8.15217
260 4YNU FAD 0.004323 0.45643 8.29146
261 4YNU LGC 0.005052 0.45643 8.29146
262 5N5D SAM 0.00004084 0.52262 8.40708
263 3DUW SAH 0.00005554 0.45569 8.52018
264 2BZG SAH 0.000009535 0.48915 8.62069
265 3VC1 SAH 0.0001112 0.53347 8.65385
266 5THQ NDP 0.008161 0.4274 8.82353
267 1Q0S SAH 0.00000003822 0.52152 8.88031
268 2PX8 SAH 0.0006114 0.42077 8.92193
269 5ITV NAI 0.003939 0.44434 9.01961
270 1P1C SAH 0.0002339 0.41768 9.04523
271 5E72 SAM 0.000001289 0.59892 9.24856
272 1G55 SAH 0.000001677 0.51235 10.2041
273 5UAO FAD 0.005646 0.44464 10.5528
274 2DPM SAM 0.00000104 0.4984 10.5634
275 4M37 SAH 0.00001556 0.4788 10.7872
276 3NUG NAD 0.003826 0.44497 10.9312
277 3RIY NAD 0.002614 0.45181 11.3553
278 3LKZ SFG 0.00003058 0.46391 11.809
279 2WA2 SAM 0.00006627 0.50775 11.9565
280 3EGV SAH 0.00003762 0.47761 12.2047
281 2NXE SAM 0.00004063 0.46665 12.2047
282 5L95 AMP 0.001163 0.45386 12.5448
283 4YMH SAH 0.00009572 0.44138 13.3333
284 4GQB 0XU 0.000005271 0.46009 13.6364
285 4M38 SAH 0.000009814 0.47592 14.2857
286 2JJQ SAH 0.000001319 0.56221 14.3216
287 1Q9I TEO 0.002079 0.48222 14.3216
288 5BUK FAD 0.003938 0.45851 14.3216
289 4II2 ATP 0.00107 0.40631 18.0723
290 3GCZ SAM 0.00001352 0.48381 19.5035
291 5HJM MTA 0.0000001519 0.54601 20.7386
292 1SQF SAM 0.0000303 0.46962 21.608
293 5E8J SAH 0.00004757 0.4944 27.2727
Pocket No.: 2; Query (leader) PDB : 3VSE; Ligand: SAH; Similar sites found: 7
This union binding pocket(no: 2) in the query (biounit: 3vse.bio1) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4ZGS NAD 0.0143 0.41252 3.10881
2 4MCC 21X 0.0167 0.4106 3.25203
3 4J4H NAI 0.03782 0.41337 4.2471
4 4J4H 1J1 0.03782 0.41337 4.2471
5 3QV1 NAD 0.02283 0.4038 7.31707
6 4J1Q NDP 0.0284 0.40164 7.53769
7 2BOS GLA GAL GLC 0.01418 0.40117 10.2941
Pocket No.: 3; Query (leader) PDB : 3VSE; Ligand: SAH; Similar sites found: 1
This union binding pocket(no: 3) in the query (biounit: 3vse.bio4) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3KVY URA 0.01665 0.40166 15.5779
Pocket No.: 4; Query (leader) PDB : 3VSE; Ligand: SAH; Similar sites found: 5
This union binding pocket(no: 4) in the query (biounit: 3vse.bio2) has 17 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3PFG SAM 0.03289 0.43253 2.6616
2 3RKR NAP 0.006828 0.4114 3.81679
3 5T2U NAP 0.02568 0.4061 6.45161
4 1NFQ NAI 0.02209 0.40828 7.69231
5 2BOS GLA GAL GLC NBU 0.01504 0.40182 10.2941
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