Receptor
PDB id Resolution Class Description Source Keywords
3X1W 1.2 Å NON-ENZYME: OTHER RAS-RELATED PROTEIN RAP1B WITH GDP RATTUS NORVEGICUS SIGNAL TRANSDUCTION SIGNALING PROTEIN
Ref.: THE STRUCTURE AND CONFORMATIONAL SWITCHING OF RAP1B BIOCHEM.BIOPHYS.RES.COMMUN. V. 462 46 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GDP A:201;
Valid;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
CD A:203;
Invalid;
none;
submit data
112.411 Cd [Cd+2...
MG A:202;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3X1Z 1.25 Å NON-ENZYME: OTHER RAS-RELATED PROTEIN RAP1B(T65A) WITH GPPNHP RATTUS NORVEGICUS SIGNAL TRANSDUCTION SIGNALING PROTEIN
Ref.: THE STRUCTURE AND CONFORMATIONAL SWITCHING OF RAP1B BIOCHEM.BIOPHYS.RES.COMMUN. V. 462 46 2015
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (147)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 14 families.
1 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
3 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
11 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
12 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
14 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
16 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
17 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
18 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
19 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
20 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
21 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
27 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
28 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
29 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
33 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
35 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
36 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
39 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
40 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
41 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
42 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
44 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
45 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
47 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
49 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
51 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
53 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
54 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
56 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
57 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
61 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
63 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
69 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
71 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
72 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
75 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
76 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
77 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
78 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
80 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
81 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
82 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
83 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
84 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
85 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
87 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
88 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
91 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
92 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
93 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
94 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
97 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
99 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
101 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
102 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
104 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
105 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
109 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
111 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
112 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
114 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
115 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
116 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
118 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
121 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
122 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
124 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
125 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
126 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
127 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
129 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
130 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
131 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
133 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
134 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
135 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
136 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
137 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
138 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
139 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
140 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
145 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (246)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
19 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
27 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
36 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
40 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
41 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
45 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
47 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
49 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
57 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
61 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
78 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
81 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
84 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
85 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
87 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
88 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
91 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
92 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
93 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
94 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
97 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
99 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
101 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
102 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
104 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
109 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
112 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
114 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
118 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
124 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
126 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
127 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
130 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
133 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
134 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
135 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
138 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
140 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
145 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
150 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
151 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
152 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
153 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
154 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
155 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
156 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
157 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
158 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
163 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
164 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
165 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
168 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 1N6K - GDP AF3 n/a n/a
170 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
171 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
172 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
174 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
175 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
178 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
179 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
181 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
183 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
185 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
186 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
187 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
188 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
189 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
190 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
191 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
192 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
193 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
194 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
197 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
201 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
203 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
207 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
208 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
209 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
210 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
211 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
214 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
215 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
216 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
221 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
225 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
227 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
228 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
229 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
230 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
231 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
232 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
234 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
235 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
236 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
237 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
238 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
239 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
241 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
242 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
243 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
244 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
245 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 153
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 GNP 0.839506 0.973684
6 G 0.828947 0.986486
7 5GP 0.828947 0.986486
8 G1R 0.82716 0.986667
9 GCP 0.82716 0.973684
10 GSP 0.817073 0.948718
11 GAV 0.797619 0.961039
12 GMV 0.792683 0.973684
13 G2P 0.77381 0.961039
14 G2R 0.770115 0.961039
15 GDP MG 0.759036 0.923077
16 GP2 0.756098 0.961039
17 GDP BEF 0.75 0.9
18 GDD 0.747253 0.961039
19 GKE 0.747253 0.961039
20 GDC 0.747253 0.961039
21 GPG 0.741573 0.961039
22 G3D 0.732558 0.986486
23 ALF 5GP 0.729412 0.888889
24 Y9Z 0.728261 0.902439
25 GTP MG 0.724138 0.923077
26 BEF GDP 0.724138 0.888889
27 G5P 0.723404 0.973684
28 GFB 0.72043 0.961039
29 GTG 0.72043 0.936709
30 GDR 0.72043 0.961039
31 G4P 0.715909 0.986486
32 GCP G 0.715909 0.935065
33 6CK 0.712766 0.936709
34 G3A 0.712766 0.973684
35 GDP ALF 0.7 0.888889
36 GDP AF3 0.7 0.888889
37 YGP 0.698925 0.901235
38 JB2 0.697917 0.961039
39 GKD 0.697917 0.961039
40 GDX 0.690722 0.973684
41 GPD 0.690722 0.925
42 GMP 0.684211 0.88
43 0O2 0.666667 0.986486
44 G G 0.659574 0.935065
45 JB3 0.656863 0.948718
46 NGD 0.650485 0.961039
47 GDP 7MG 0.636364 0.911392
48 DGI 0.636364 0.923077
49 U2G 0.634615 0.936709
50 GPX 0.634409 0.946667
51 IDP 0.632184 0.972973
52 2MD 0.632075 0.891566
53 CAG 0.62963 0.880952
54 CG2 0.622642 0.936709
55 FEG 0.619048 0.879518
56 MGD 0.614679 0.891566
57 ZGP 0.613208 0.869048
58 GH3 0.612903 0.973333
59 3GP 0.611765 0.946667
60 MD1 0.607143 0.891566
61 PGD 0.59292 0.925
62 DGT 0.591398 0.923077
63 BGO 0.588785 0.924051
64 TPG 0.582609 0.840909
65 DBG 0.582609 0.948718
66 2GP 0.574713 0.96
67 FE9 0.570175 0.776596
68 I2C FE2 CMO CMO 0.566372 0.808989
69 G A A A 0.553571 0.923077
70 MGP 0.553191 0.961039
71 U A G G 0.548673 0.935065
72 G4M 0.548387 0.880952
73 6G0 0.547368 0.961039
74 G1R G1R 0.542373 0.924051
75 P2G 0.527473 0.883117
76 PGD O 0.525 0.850575
77 ADP 0.522222 0.92
78 GGM 0.517544 0.901235
79 DG 0.516484 0.910256
80 DGP 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G G U 0.509259 0.935065
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 G C 0.504348 0.9
86 GPC 0.491525 0.879518
87 G7M 0.483871 0.948052
88 6AD 0.479592 0.841463
89 ATP 0.473684 0.92
90 G2Q 0.471154 0.961039
91 U G A 0.469697 0.888889
92 5FA 0.46875 0.92
93 AQP 0.46875 0.92
94 GTA 0.468468 0.936709
95 7DD 0.468085 0.906667
96 G G G RPC 0.466102 0.875
97 SGP 0.463158 0.82716
98 01G 0.462963 0.902439
99 B4P 0.457447 0.894737
100 AP5 0.457447 0.894737
101 A2D 0.456522 0.894737
102 G G G C 0.455285 0.9125
103 ACQ 0.454545 0.896104
104 5GP 5GP 0.454545 0.883117
105 ANP 0.454545 0.896104
106 A G C C 0.451613 0.911392
107 APC G U 0.45082 0.886076
108 G U34 0.449153 0.888889
109 DG DG 0.448598 0.865854
110 ITT 0.447917 0.868421
111 BA3 0.446809 0.894737
112 35G 0.444444 0.933333
113 C2E 0.444444 0.921053
114 PCG 0.444444 0.933333
115 MGO 0.441176 0.864198
116 AN2 0.4375 0.907895
117 G C C C 0.4375 0.924051
118 M33 0.43299 0.883117
119 UCG 0.429688 0.911392
120 A G U 0.42963 0.888889
121 ACP 0.428571 0.896104
122 MGQ 0.424528 0.935897
123 7DT 0.424242 0.906667
124 APR 0.424242 0.894737
125 AR6 0.424242 0.894737
126 93A 0.42268 0.833333
127 A4P 0.420168 0.869048
128 SAP 0.42 0.873418
129 AD9 0.42 0.896104
130 AGS 0.42 0.873418
131 G8D 0.42 0.875
132 CA0 0.418367 0.896104
133 ATF 0.417476 0.884615
134 AGO 0.414634 0.888889
135 NIA 0.413043 0.82716
136 MGV 0.412844 0.890244
137 TAT 0.411765 0.884615
138 A1R 0.411215 0.839506
139 ADQ 0.411215 0.871795
140 RGT 0.410714 0.909091
141 CGP 0.409836 0.86747
142 AMP 0.408602 0.893333
143 A 0.408602 0.893333
144 UP5 0.40678 0.873418
145 C2R 0.406593 0.906667
146 AMZ 0.406593 0.918919
147 JBT 0.405882 0.778947
148 A22 0.40566 0.907895
149 25L 0.405405 0.907895
150 ADX 0.40404 0.809524
151 8OD 0.401961 0.946667
152 4TC 0.4 0.851852
153 50T 0.4 0.883117
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3X1Z; Ligand: GNP; Similar sites found: 253
This union binding pocket(no: 1) in the query (biounit: 3x1z.bio1) has 28 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1MR3 G3D 0.00000001005 0.52327 None
2 3PQC GDP 0.00000006733 0.50468 None
3 2OFW ADX 0.002591 0.42124 None
4 5DG2 GAL GLC 0.02138 0.40594 None
5 2FJK 13P 0.02812 0.40058 None
6 5HCN GCP 0.000000001341 0.75355 1.1976
7 1LES GLC FRU 0.009756 0.41752 1.1976
8 3ZFD ANP 0.00000008053 0.65751 1.79641
9 2GWH A3P 0.008525 0.41122 1.79641
10 1WY7 SAH 0.004793 0.40918 1.79641
11 1ZIN AP5 0.006078 0.40717 1.79641
12 1JJ7 ADP 0.00001068 0.60598 2.39521
13 1YTM ATP 0.0007058 0.45197 2.39521
14 2Q2Y ADP 0.001577 0.43117 2.39521
15 2Q2Y MKR 0.00177 0.42799 2.39521
16 1LVG ADP 0.000007748 0.59534 2.99401
17 1TQ4 GDP 0.00000007666 0.5397 2.99401
18 1JI0 ATP 0.0001259 0.53187 2.99401
19 2FAH GDP 0.0004926 0.47243 2.99401
20 2JLR ANP 0.0005802 0.46912 2.99401
21 1KO8 6PG 0.001199 0.4459 2.99401
22 3RC3 ANP 0.01421 0.41966 2.99401
23 1XXR MAN 0.03084 0.40822 3.10559
24 2IYL GDP 0.000008162 0.43279 3.52113
25 2VVG ADP 0.000001137 0.65736 3.59281
26 1YQT ADP 0.00004045 0.56507 3.59281
27 1JJV ATP 0.0001093 0.53967 3.59281
28 2ZPA ADP 0.0004788 0.46367 3.59281
29 3H86 AP5 0.001565 0.4253 3.59281
30 2F5X ASP 0.03393 0.406 3.59281
31 1X6V ADP 0.003425 0.40497 3.59281
32 1OS1 PYR 0.004077 0.40341 3.59281
33 1OS1 ATP 0.003754 0.40341 3.59281
34 1MKY GDP 0.0000000002314 0.80374 4.19162
35 2FH5 GTP 0.000000000007294 0.80072 4.19162
36 2HCJ GDP 0.0000000005165 0.79983 4.19162
37 2BVN GNP 0.00000000006136 0.60941 4.19162
38 1D8T GDP 0.000000001655 0.5277 4.19162
39 1XX6 ADP 0.000223 0.52455 4.19162
40 3BFV ADP 0.00009345 0.52438 4.19162
41 4LPS GDP 0.0000001574 0.4834 4.19162
42 2PL3 ADP 0.0008264 0.48292 4.19162
43 1YXM ADE 0.005248 0.43482 4.19162
44 1NJF AGS 0.000177 0.42809 4.19162
45 2BEK ATP 0.001816 0.42638 4.19162
46 1NJF ADP 0.0001636 0.41737 4.19162
47 1D2N ANP 0.004787 0.41563 4.19162
48 1SVI GDP 0.00000000097 0.78585 4.79042
49 4IEE AGS 0.0007018 0.48655 4.79042
50 3BOS CDP 0.0005376 0.48651 4.79042
51 1NY5 ADP 0.001754 0.44254 4.79042
52 3QF7 ANP 0.002177 0.43434 4.79042
53 1FNN ADP 0.0002401 0.41352 4.79042
54 3TW1 AHN 0.03496 0.40429 4.79042
55 1U3G ADP 0.03422 0.4039 4.79042
56 4WOP CTP 0.00007224 0.49521 4.88889
57 1NU4 MLA 0.002052 0.40819 5.15464
58 1NRJ GTP 0.0000000009561 0.70825 5.38922
59 3WXM GTP 0.0000000002076 0.66705 5.38922
60 5KSP GDP 0.0000001067 0.66106 5.38922
61 5KSZ GCP 0.0000001805 0.64085 5.38922
62 3W5J GDP 0.000003622 0.61866 5.38922
63 3H4S ADP 0.000004898 0.61734 5.38922
64 4WZ6 ATP 0.00004835 0.55983 5.38922
65 2QZ4 ADP 0.00009319 0.51184 5.38922
66 3A1S GDP 0.00000009893 0.49932 5.38922
67 1SKQ GDP 0.00000001702 0.49662 5.38922
68 2VF7 ADP 0.001339 0.46163 5.38922
69 4R98 GNH 0.000001615 0.4591 5.38922
70 3FWY ADP 0.000009943 0.45277 5.38922
71 4MKF AP5 0.004418 0.41389 5.38922
72 2WIC GNP 0.01444 0.40199 5.38922
73 1WF3 GNP 0.000000001452 0.65937 5.98802
74 2C78 GNP 0.0000000000584 0.65676 5.98802
75 2C77 GNP 0.0000000000699 0.64494 5.98802
76 1G7C 5GP 0.0000005129 0.63702 5.98802
77 1F9V ADP 0.00001269 0.5905 5.98802
78 1G3Q ADP 0.00003531 0.53847 5.98802
79 1ION ADP 0.00005739 0.52186 5.98802
80 5LB3 ADP 0.00023 0.51131 5.98802
81 1F5N GNP 0.00001131 0.49478 5.98802
82 1SQ5 ADP 0.0003023 0.49309 5.98802
83 2B8W ALF 5GP 0.000008528 0.48808 5.98802
84 2WOJ ADP ALF 0.00004994 0.47923 5.98802
85 4R43 GDP 0.0008093 0.47766 5.98802
86 4R2I ANP 0.002842 0.4609 5.98802
87 4XTR ATP 0.00008508 0.44648 5.98802
88 4XVU ATP 0.00008597 0.44641 5.98802
89 4YS0 ADP 0.001477 0.44594 5.98802
90 4XTR ADP 0.00006475 0.43334 5.98802
91 3DC4 ADP 0.000003087 0.41961 5.98802
92 2ZFI ADP 0.00001981 0.41886 5.98802
93 1UKG MMA 0.02317 0.41225 5.98802
94 1Q8S MAN MMA 0.0293 0.4095 5.98802
95 4IOK ADP 0.01428 0.40578 5.98802
96 1O8B ABF 0.02669 0.40555 5.98802
97 1UKZ ADP 0.004779 0.40459 5.98802
98 4IOK XPO 0.01296 0.40323 5.98802
99 1Q8Q MAN MMA 0.041 0.40076 5.98802
100 3FVQ ATP 0.0007517 0.40071 5.98802
101 1APZ ASP 0.03262 0.405 6.17284
102 1G7S GDP 0.00000001281 0.70586 6.58683
103 3EC1 GDP 0.00000002114 0.69528 6.58683
104 4CVN ADP 0.00003319 0.56222 6.58683
105 4NON GDP 0.0000003726 0.55813 6.58683
106 2DPY ADP 0.000208 0.52044 6.58683
107 5BQ5 ADP BEF 0.0001015 0.51007 6.58683
108 4ZG4 VO4 ADP 0.00000236 0.5014 6.58683
109 5MZN ADP 0.001554 0.47466 6.58683
110 2XAU ADP 0.001599 0.45313 6.58683
111 4KBF AMP 0.003298 0.4522 6.58683
112 3VX3 ADP 0.0001016 0.42866 6.58683
113 2CHG ANP 0.0003014 0.41107 6.58683
114 4P32 ADP 0.006279 0.40729 6.58683
115 5KUT GDP 0.000000005602 0.52392 7.18563
116 2XTN GTP 0.0000009561 0.51891 7.18563
117 4QM7 GTP 0.0001922 0.50878 7.18563
118 5I0H ADP BEF 0.0000007575 0.5053 7.18563
119 1IHU AF3 0.00007025 0.49088 7.18563
120 1IWE IMP 0.0005212 0.48931 7.18563
121 1IHU ADP 0.0000921 0.48129 7.18563
122 3TBK ANP 0.001204 0.48046 7.18563
123 2J5V PCA 0.0268 0.42763 7.18563
124 4U60 SIA GAL NGA 0.01355 0.41947 7.18563
125 4U60 SIA 0.01553 0.41451 7.18563
126 4LC1 GDP 0.000000009228 0.50522 7.78443
127 1XKV ATP 0.0004363 0.47996 7.78443
128 1JWY GDP 0.000001906 0.47438 7.78443
129 5L3W GDP 0.00002495 0.43206 7.78443
130 1JWY ADP 0.00002004 0.41985 7.78443
131 4NU0 AP5 0.002889 0.41818 7.78443
132 3COB ADP 0.00001202 0.40285 7.78443
133 1FQK ALF 0.0000002672 0.68331 8.38323
134 1D2E GDP 0.00000003186 0.66726 8.38323
135 1AZT GSP 0.0000000007461 0.65211 8.38323
136 1TAD GDP 0.000000004045 0.62456 8.38323
137 1TAD ALF 0.000000004045 0.62456 8.38323
138 1FQK GDP 0.0000001458 0.59887 8.38323
139 3E70 GDP 0.00001137 0.56241 8.38323
140 5M04 GDP 0.000000007056 0.50827 8.38323
141 1KK1 GNP 0.0000000113 0.50159 8.38323
142 1R6B ADP 0.000207 0.50109 8.38323
143 4LJ9 ACP 0.001448 0.46505 8.38323
144 2VB6 ADP BEF 0.00004946 0.45334 8.38323
145 4PFO ADP 0.0002029 0.44202 8.38323
146 3QKT ANP 0.002339 0.41902 8.38323
147 1P72 ADP 0.00278 0.41271 8.38323
148 2CK3 ADP 0.0008152 0.40992 8.38323
149 2CK3 ANP 0.0005178 0.40249 8.38323
150 1W0J ADP 0.0002953 0.40097 8.38323
151 1W0J ADP BEF 0.0005923 0.40037 8.38323
152 2ODE ALF GDP 0.000000001574 0.65348 8.98204
153 1BH2 GSP 0.000000001731 0.63849 8.98204
154 1SVK ALF GDP 0.000000002172 0.6247 8.98204
155 1Y3A GDP 0.0000003087 0.5852 8.98204
156 2OM2 GDP 0.0000008777 0.57886 8.98204
157 1GP2 GDP 0.000000819 0.5674 8.98204
158 4YMU ATP 0.00006862 0.53813 8.98204
159 3TK1 GDP 0.000000001236 0.50899 8.98204
160 1F2U ATP 0.004122 0.40309 9.39597
161 2RCN GDP 0.00000000006904 0.82991 9.58084
162 4AG5 ADP 0.00002728 0.57289 9.58084
163 2HF9 GSP 0.000001734 0.52032 9.58084
164 3RLF ANP 0.0008222 0.40929 9.58084
165 2QEN ADP 0.0004025 0.40168 9.58084
166 1OYY AGS 0.008599 0.42643 10.1796
167 5I34 GDP 0.00005389 0.4147 10.1796
168 5L3R GCP 0.000003277 0.5366 10.7784
169 3ZQ6 ADP ALF 0.00003092 0.4875 10.7784
170 2FSH ANP 0.005027 0.44283 10.7784
171 1UPT GTP 0.00000000003378 0.76136 11.3772
172 1R4A GNP 0.0000000001581 0.71444 11.5152
173 1FQJ GDP 0.00000006575 0.56225 11.9048
174 1FQJ ALF 0.0000001918 0.44408 11.9048
175 5N69 ADP 0.00002949 0.5293 11.976
176 1QF5 GDP 0.004935 0.44778 11.976
177 1QF5 RPL 0.004935 0.44778 11.976
178 4PJ3 ANP 0.004649 0.42705 11.976
179 4A4Z ANP 0.01021 0.42269 11.976
180 4GBM A3P 0.005543 0.40652 11.976
181 5NUL FMN 0.01447 0.4007 12.3188
182 5L3V GDP 0.000008634 0.56097 12.5749
183 5L3S GNP 0.00001353 0.48061 12.5749
184 5CK5 GDP 0.000000000993 0.52724 13.1737
185 3DZD ADP 0.001062 0.4569 13.1737
186 1LOB MMA 0.04122 0.4012 13.4615
187 1CS4 GSP 0.0000000007939 0.66233 13.7725
188 2C04 GCP 0.0001425 0.42453 13.7725
189 1V8K ANP 0.00000107 0.62111 14.9701
190 3IIJ ADP 0.00002797 0.55049 14.9701
191 4H1V GNP 0.000003226 0.4741 14.9701
192 2GJ8 ALF GDP 0.000000001152 0.66336 15.5689
193 2XT3 ADP 0.000003751 0.62435 15.5689
194 4B47 GDP 0.000000000369 0.80728 16.1677
195 1DAR GDP 0.00000005773 0.68429 16.1677
196 1KK8 BEF ADP 0.00001614 0.53523 16.1677
197 1B7T ADP 0.00004643 0.52623 16.1677
198 1M7G ADX 0.002497 0.41321 16.1677
199 1M7G ADP 0.002975 0.40737 16.1677
200 4QOS ADP 0.001191 0.45921 16.7665
201 1NST A3P 0.00895 0.41026 16.7665
202 3AB3 GDP 0.00000003276 0.55784 17.3653
203 3DEF GDP 0.000001182 0.47914 17.3653
204 4NCN GTP 0.000000000007218 0.77964 17.9641
205 4V0K GDP 0.0000007919 0.56202 17.9641
206 4IDN GNP 0.0000414 0.50071 17.9641
207 1QHH ATP 0.01179 0.41556 17.9641
208 3ZS9 ADP ALF 0.00003648 0.47555 18.4211
209 1PUJ GNP 0.000000001872 0.7245 18.5629
210 4BAS GNP 0.000000003099 0.59928 18.5629
211 3KJI ADP 0.004561 0.41121 18.5629
212 2XTZ GSP 0.00000000009659 0.71452 19.7605
213 1H65 GDP 0.000006328 0.53563 19.7605
214 4HI0 GDP 0.0000008849 0.50537 19.7605
215 5XVQ 8GC 0.03999 0.40249 19.7605
216 4DCT GDP 0.000000000531 0.77313 20.3593
217 3CX8 GSP 0.0000000004853 0.67352 20.9581
218 3T1O GDP 0.000000114 0.65033 20.9581
219 3T12 GDP ALF 0.000000001417 0.61387 20.9581
220 1FP6 ADP 0.00002888 0.42959 20.9581
221 2WJG GDP 0.00000001958 0.50739 23.3533
222 2WJH GDP 0.0000000187 0.5212 23.494
223 2WJH FLC 0.000002015 0.46274 23.494
224 3B5J 12D 0.0001137 0.5342 23.9521
225 1QAN SAH 0.001561 0.42966 23.9521
226 2QTV GNP 0.000000001393 0.67551 25.7485
227 1M2O GNP 0.000000001262 0.66939 25.7485
228 5FG3 GDP 0.0000000002708 0.53587 25.7485
229 1FZQ GDP 0.000000002776 0.74997 27.5449
230 1F6B GDP 0.00000009567 0.49671 28.1437
231 2A5F GTP 0.0000000004204 0.69694 29.3413
232 1KSH GDP 0.00000000004646 0.65082 29.9401
233 4M9Q GNP 0.0000000000669 0.74865 30.5389
234 1YZG GDP 0.00000001621 0.70089 30.5389
235 1YRB GDP 0.0000000003678 0.58161 30.5389
236 1J2J GTP 0.00000000004279 0.74719 31.3253
237 1O3Y GTP 0.0000000001614 0.65448 31.3253
238 1S9D GDP 0.00000003158 0.68679 31.7073
239 1RE0 GDP 0.000000003709 0.51231 31.7073
240 1ZJ6 G3D 0.00000001375 0.70436 32.3353
241 1GOT GDP 0.0000004913 0.52348 32.8767
242 2ZEJ GDP 0.000003235 0.52643 33.5329
243 1ZD9 GDP 0.0000000001376 0.62599 34.7305
244 5KDO GDP 0.0000006096 0.58577 40.5405
245 2QN6 GDP 0.0000000007972 0.7902 41.9162
246 4RD0 GDP 0.00000000001592 0.67631 41.9162
247 1NF3 GNP 0.0000000000001861 0.82432 47.3054
248 2NGR GDP 0.00000000000562 0.86924 48.503
249 2NGR AF3 0.00000001062 0.74539 48.503
250 4ITR GDP 0.000000004843 0.68631 48.503
251 1GRN GDP 0.000000000007973 0.64683 48.503
252 4DID GDP 0.0000000002029 0.5644 48.503
253 1GRN AF3 0.00000003245 0.46885 48.503
Pocket No.: 2; Query (leader) PDB : 3X1Z; Ligand: GNP; Similar sites found: 28
This union binding pocket(no: 2) in the query (biounit: 3x1z.bio2) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4GOX A3P 0.001924 0.40175 None
2 3UIE ANP 0.0002129 0.40137 None
3 4HSE ADP 0.00008486 0.40497 2.39521
4 5HR5 ADP 0.0003836 0.40493 3.59281
5 4D81 ADP 0.0002569 0.40461 4.19162
6 1GOJ ADP 0.0000006409 0.40364 4.19162
7 2IXE ATP 0.0008587 0.4101 4.79042
8 1L2T ATP 0.001533 0.40948 4.79042
9 1W5T ANP 0.0007257 0.40752 4.79042
10 1P4V GLY 0.03182 0.40458 4.79042
11 4NFE BEN 0.0331 0.40428 4.79042
12 1IN4 ADP 0.0006208 0.40188 4.79042
13 3QDK QDK 0.03985 0.4048 5.38922
14 4FRZ ADP 0.000009559 0.40352 5.38922
15 5H56 ADP 0.005321 0.40149 5.38922
16 5H56 TYD 0.005321 0.40149 5.38922
17 2GMM MAN MAN 0.01453 0.42562 5.98802
18 2Z49 AMG 0.02275 0.41229 5.98802
19 5X40 ACP 0.001387 0.40653 5.98802
20 4U60 SIA GAL BGC NGA GAL 0.02543 0.4053 7.18563
21 4ZU4 4TG 0.01567 0.40101 7.43243
22 2V7Q ATP 0.0002079 0.40347 8.38323
23 2V7Q ADP 0.00007175 0.40294 8.38323
24 1Z6T ADP 0.000461 0.40138 9.58084
25 1V0O INR 0.01128 0.40424 10.1796
26 3ZIA ADP 0.0002819 0.40552 14.9701
27 3ZIA ATP 0.0001206 0.40512 14.9701
28 1M7G AV2 0.00004087 0.4035 16.1677
Feedback