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Receptor
PDB id Resolution Class Description Source Keywords
3X1Y 1.17 Å NON-ENZYME: OTHER RAS-RELATED PROTEIN RAP1B(L9V) WITH GPPNHP RATTUS NORVEGICUS SIGNAL TRANSDUCTION SIGNALING PROTEIN
Ref.: THE STRUCTURE AND CONFORMATIONAL SWITCHING OF RAP1B BIOCHEM.BIOPHYS.RES.COMMUN. V. 462 46 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP A:201;
Valid;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
GOL A:203;
Invalid;
none;
submit data
92.094 C3 H8 O3 C(C(C...
MG A:202;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
CD A:204;
Invalid;
none;
submit data
112.411 Cd [Cd+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3X1Z 1.25 Å NON-ENZYME: OTHER RAS-RELATED PROTEIN RAP1B(T65A) WITH GPPNHP RATTUS NORVEGICUS SIGNAL TRANSDUCTION SIGNALING PROTEIN
Ref.: THE STRUCTURE AND CONFORMATIONAL SWITCHING OF RAP1B BIOCHEM.BIOPHYS.RES.COMMUN. V. 462 46 2015
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (173)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
3 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 6ARK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
9 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
10 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
11 5VPZ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
12 6F76 - CVK C24 H26 N2 O3 CN(C)Cc1cc....
13 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
14 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
16 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
17 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 5OCO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
20 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
22 5VP7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
25 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 5VBM - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
27 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
30 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
33 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
35 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
36 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
37 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
38 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
39 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
40 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
41 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
42 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
44 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
45 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 5VQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
47 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
49 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 5VPY - 9GM C10 H17 N6 O13 P3 c1nc2c(n1[....
52 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
53 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
55 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
56 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
57 5VQ6 - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
58 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
59 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
60 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
61 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
63 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
64 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
67 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
68 5UK9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
69 6ASE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
72 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 5VQ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
76 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
77 5VPI - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
78 5W22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
79 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
80 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
81 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
83 6BP1 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
84 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
85 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
86 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
87 5VBZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
88 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
91 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
92 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
93 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
94 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
97 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
99 5VQ8 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
101 6B0Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
102 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
103 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
104 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
106 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
107 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 5OCT - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
109 5VBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
110 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
111 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
112 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
114 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
115 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
116 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
118 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
119 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
120 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
121 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
123 6B0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
124 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
125 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
126 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
127 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
130 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
132 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
133 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
134 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
135 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
138 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
139 5VQ2 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
140 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
142 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
145 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
146 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 5WHD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
149 5V9U - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
150 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
151 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
152 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
153 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
154 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
155 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
156 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
157 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
158 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
159 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
160 5OCG - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
161 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
162 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
163 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
164 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
165 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
167 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
168 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
170 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
171 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
172 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (274)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKR - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
18 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
22 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 6ARK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 5VPZ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
27 6F76 - CVK C24 H26 N2 O3 CN(C)Cc1cc....
28 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
29 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
31 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
32 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5OCO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
34 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
36 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 5VP7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
38 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
40 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
41 5VBM - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
43 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
45 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
47 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
49 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
54 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
55 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
57 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
58 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
59 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
61 5VQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
62 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
64 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5VPY - 9GM C10 H17 N6 O13 P3 c1nc2c(n1[....
67 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
68 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
71 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 5VQ6 - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
73 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
78 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
81 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 5UK9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
84 6ASE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
85 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
86 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
87 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
88 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
90 5VQ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
91 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
92 5VPI - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
93 5W22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
94 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
96 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
97 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
98 6BP1 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
99 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
101 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
102 5VBZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
104 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
107 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
108 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
109 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
112 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
113 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
114 5VQ8 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 6B0Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
117 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
118 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
119 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
123 5OCT - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
124 5VBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
126 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
127 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
128 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
130 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
133 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
134 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
135 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
138 6B0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
140 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
141 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
142 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
143 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
144 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
145 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
147 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
150 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
151 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
152 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
153 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
154 5VQ2 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
155 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
156 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
157 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
158 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 5WHD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
163 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
164 5V9U - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
165 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
168 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
170 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
171 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
172 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
174 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
175 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
178 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
179 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
181 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
183 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
185 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
186 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
187 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
188 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
189 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
190 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
191 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
192 1N6K - GDP AF3 n/a n/a
193 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
194 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
197 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
201 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
203 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
207 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
208 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
209 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
210 5OCG - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
211 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
214 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
215 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
216 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
221 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
225 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
227 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
228 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
229 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
230 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
231 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
232 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
234 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
235 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
236 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
237 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
238 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
239 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
241 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
242 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
243 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
244 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
245 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
247 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
248 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
249 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
250 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
251 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
252 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
253 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
254 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
255 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
256 5A0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
257 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
258 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
259 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
260 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
261 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
262 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
263 5XC5 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
264 5XC3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
265 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
266 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
267 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
268 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
269 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
270 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
271 6BSX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
272 5YXH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
273 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
274 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 132
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 9GM 1 1
3 GDP 0.839506 0.973684
4 GP3 0.82716 0.948718
5 GTP 0.809524 0.973684
6 GNH 0.807229 0.986842
7 G1R 0.77907 0.961039
8 GCP 0.77907 0.948718
9 GSP 0.770115 0.925
10 5GP 0.756098 0.960526
11 G 0.756098 0.960526
12 G2R 0.747253 0.936709
13 GMV 0.747126 0.948718
14 GAV 0.714286 0.936709
15 GP2 0.712644 0.936709
16 G2P 0.711111 0.936709
17 Y9Z 0.708333 0.880952
18 GDC 0.690722 0.936709
19 GDD 0.690722 0.936709
20 GKE 0.690722 0.936709
21 G5P 0.686869 0.948718
22 GPG 0.684211 0.936709
23 GTG 0.683673 0.91358
24 GDR 0.683673 0.936709
25 GFB 0.683673 0.936709
26 JB2 0.68 0.936709
27 GKD 0.68 0.936709
28 6CK 0.676768 0.91358
29 G3A 0.676768 0.948718
30 GDX 0.673267 0.948718
31 ALF 5GP 0.67033 0.86747
32 YGP 0.663265 0.879518
33 GPD 0.656863 0.902439
34 ALF GDP 0.645833 0.86747
35 GDP AF3 0.645833 0.86747
36 GDP ALF 0.645833 0.86747
37 JB3 0.641509 0.925
38 DBG 0.640351 0.974359
39 G3D 0.638298 0.960526
40 G4P 0.625 0.960526
41 GMP 0.621951 0.857143
42 NGD 0.62037 0.936709
43 GGM 0.618182 0.925926
44 0O2 0.616162 0.960526
45 2MD 0.603604 0.870588
46 CAG 0.60177 0.904762
47 U2G 0.590909 0.91358
48 FEG 0.590909 0.858824
49 GDP 7MG 0.590476 0.888889
50 MGD 0.587719 0.870588
51 G G 0.586538 0.924051
52 ZGP 0.585586 0.848837
53 CG2 0.580357 0.91358
54 ANP 0.568421 0.922078
55 PGD 0.567797 0.902439
56 MD1 0.567797 0.870588
57 3GP 0.56044 0.922078
58 TPG 0.558333 0.822222
59 GH3 0.55 0.948052
60 FE9 0.546219 0.778947
61 GPX 0.539216 0.922078
62 G4M 0.539062 0.860465
63 DGI 0.536082 0.9
64 BGO 0.535088 0.901235
65 IDP 0.53125 0.947368
66 DGT 0.53 0.9
67 2GP 0.526882 0.935065
68 G1R G1R 0.520325 0.901235
69 GCP G 0.518868 0.897436
70 A G 0.516949 0.911392
71 U A G G 0.512605 0.911392
72 G A A A 0.504202 0.9
73 AGO 0.504202 0.91358
74 P2G 0.5 0.860759
75 G1G 0.5 0.902439
76 R7I 0.49505 0.922078
77 MGP 0.49505 0.936709
78 R5I 0.49505 0.922078
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 AKW 0.483051 0.869048
83 DG 0.474227 0.8875
84 DGP 0.474227 0.8875
85 G U 0.466667 0.878049
86 IMP 0.463918 0.934211
87 G2Q 0.462963 0.936709
88 GPC 0.459677 0.858824
89 G C 0.459016 0.878049
90 GTA 0.448276 0.91358
91 G7M 0.444444 0.924051
92 MAP 0.439252 0.898734
93 G G G RPC 0.435484 0.853659
94 B4P 0.434343 0.871795
95 AP5 0.434343 0.871795
96 ADP 0.434343 0.896104
97 A2D 0.43299 0.871795
98 AT4 0.43 0.8625
99 G G G C 0.426357 0.890244
100 AU1 0.425743 0.922078
101 SGP 0.425743 0.807229
102 BA3 0.424242 0.871795
103 A G C C 0.423077 0.888889
104 35G 0.423077 0.909091
105 PCG 0.423077 0.909091
106 C2E 0.423077 0.897436
107 APC G U 0.421875 0.864198
108 HEJ 0.421569 0.896104
109 ATP 0.421569 0.896104
110 ACQ 0.419048 0.873418
111 5GP 5GP 0.419048 0.860759
112 5FA 0.417476 0.896104
113 AQP 0.417476 0.896104
114 01G 0.417391 0.880952
115 AN2 0.415842 0.909091
116 UNP 0.415842 0.810127
117 6AD 0.415094 0.821429
118 M33 0.411765 0.860759
119 ITT 0.411765 0.846154
120 G C C C 0.410448 0.901235
121 HFD 0.409524 0.851852
122 G U34 0.408 0.86747
123 ACP 0.407767 0.873418
124 6YZ 0.407407 0.873418
125 AR6 0.403846 0.871795
126 APR 0.403846 0.871795
127 DG DG 0.403509 0.845238
128 A4P 0.403226 0.848837
129 UCG 0.402985 0.888889
130 SAP 0.4 0.851852
131 AGS 0.4 0.851852
132 AD9 0.4 0.873418
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3X1Z; Ligand: GNP; Similar sites found with APoc: 459
This union binding pocket(no: 1) in the query (biounit: 3x1z.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
1 3UIE ANP None
2 1MR3 G3D None
3 3PQC GDP None
4 4GOX A3P None
5 2OFW ADX None
6 3KIH GDL None
7 2PEZ DAT None
8 2PEZ GGZ None
9 3FB4 AP5 None
10 3KC1 2T6 None
11 2FJK 13P None
12 5DG2 GAL GLC None
13 1OFH ADP None
14 3KIF GDL None
15 2KIN ADP 1.1976
16 5HCN GCP 1.1976
17 2HXW FLC 1.1976
18 1LES GLC FRU 1.1976
19 1T8U UAP SGN IDS SGN 1.1976
20 5ZW3 SAH 1.1976
21 3FJG 3PG 1.1976
22 3ZFD ANP 1.79641
23 4BQS ADP 1.79641
24 1VHT BA3 1.79641
25 1K6M AGS 1.79641
26 1TL2 NDG 1.79641
27 2Z5F A3P 1.79641
28 2GWH A3P 1.79641
29 1WY7 SAH 1.79641
30 1ZIN AP5 1.79641
31 2UVO NAG 1.79641
32 1JJ7 ADP 2.39521
33 4HSE ADP 2.39521
34 4ZNL BEF ADP 2.39521
35 2Q2Y ADP 2.39521
36 2Q2Y MKR 2.39521
37 1S3G AP5 2.39521
38 5G09 6DF 2.39521
39 1YTM ATP 2.39521
40 6M7X JD7 2.39521
41 1LVG ADP 2.99401
42 1TQ4 GDP 2.99401
43 1JI0 ATP 2.99401
44 2GDJ ANP 2.99401
45 4IHQ ADP 2.99401
46 2FAH GDP 2.99401
47 2JLR ANP 2.99401
48 2X7I CIT 2.99401
49 1KO8 6PG 2.99401
50 1E2K TMC 2.99401
51 1T3D CYS 2.99401
52 3TY3 GGG 2.99401
53 4ZDJ UTP 2.99401
54 3RC3 ANP 2.99401
55 4MKG AP5 2.99401
56 2J0W ASP 2.99401
57 3FYH ADP 2.99401
58 4PVR ASP 2.99401
59 3FSY SCA 2.99401
60 1GJW GLC 2.99401
61 4QAG F95 3.00752
62 1XXR MAN 3.10559
63 2IYL GDP 3.52113
64 2AWN ADP 3.59281
65 2VVG ADP 3.59281
66 5YV5 ADP 3.59281
67 1YQT ADP 3.59281
68 1JJV ATP 3.59281
69 5ZXD ATP 3.59281
70 2GKS ADP 3.59281
71 4TTQ ATP 3.59281
72 2CE7 ADP 3.59281
73 3DKP ADP 3.59281
74 5HR5 ADP 3.59281
75 2ZPA ADP 3.59281
76 1ZUI SKM 3.59281
77 1P9B HDA 3.59281
78 2BQP GLC 3.59281
79 3H86 AP5 3.59281
80 1AKY AP5 3.59281
81 1VKJ A3P 3.59281
82 2F5X ASP 3.59281
83 1P9B GDP 3.59281
84 1X6V ADP 3.59281
85 5W11 CTR 3.59281
86 1OS1 ATP 3.59281
87 1OS1 PYR 3.59281
88 6CBO DOW 3.59281
89 1CR1 TTP 3.71622
90 1VBO MAN 4.02685
91 1VBO MAN MAN MAN 4.02685
92 2FH5 GTP 4.19162
93 1GOJ ADP 4.19162
94 1BG2 ADP 4.19162
95 2BVN GNP 4.19162
96 1T5C ADP 4.19162
97 2Y65 ADP 4.19162
98 2NCD ADP 4.19162
99 3NHB ADP 4.19162
100 1MKY GDP 4.19162
101 5GVR LMR 4.19162
102 2HCJ GDP 4.19162
103 1D8T GDP 4.19162
104 3BFV ADP 4.19162
105 1OXV ANP 4.19162
106 4D81 ADP 4.19162
107 4LPS GDP 4.19162
108 2PL3 ADP 4.19162
109 1XX6 ADP 4.19162
110 1DAK DPU 4.19162
111 1DAK ADP 4.19162
112 1YXM ADE 4.19162
113 2BEK ATP 4.19162
114 1NJF AGS 4.19162
115 1NJF ADP 4.19162
116 1D2N ANP 4.19162
117 3MB5 SAM 4.19162
118 2RGX AP5 4.19162
119 4HE2 AMP 4.19162
120 1DQN IMU 4.19162
121 3CEV ARG 4.19162
122 1A78 TDG 4.47761
123 2WHX ADP 4.79042
124 5TSH ADP 4.79042
125 5TSH ANP 4.79042
126 1SVI GDP 4.79042
127 4IEE AGS 4.79042
128 3BOS CDP 4.79042
129 1FNN ADP 4.79042
130 2GK6 ADP 4.79042
131 1IN4 ADP 4.79042
132 2IXE ATP 4.79042
133 1W5T ANP 4.79042
134 1NY5 ADP 4.79042
135 5EXT ADP 4.79042
136 1W5T ADP 4.79042
137 3QF7 ANP 4.79042
138 1L2T ATP 4.79042
139 1P4V GLY 4.79042
140 1SVM ATP 4.79042
141 2O0J ADP 4.79042
142 3HU3 AGS 4.79042
143 3TW1 AHN 4.79042
144 1U3G ADP 4.79042
145 6AR9 3L4 4.79042
146 6FDF SAH 4.79042
147 4MZQ 1VU 4.86111
148 4WOP CTP 4.88889
149 1NU4 MLA 5.15464
150 1SKQ GDP 5.38922
151 3WXM GTP 5.38922
152 5KSP GDP 5.38922
153 3H4S ADP 5.38922
154 1NRJ GTP 5.38922
155 1G6H ADP 5.38922
156 4FRZ ADP 5.38922
157 4WZ6 ATP 5.38922
158 2WIC GNP 5.38922
159 3A1S GDP 5.38922
160 5KSZ GCP 5.38922
161 4P4T GDP 5.38922
162 4R98 GNH 5.38922
163 3FWY ADP 5.38922
164 1I9G SAM 5.38922
165 4MKF AP5 5.38922
166 1DNP MHF 5.38922
167 1LK7 DER 5.38922
168 3R7F CP 5.38922
169 1QF9 C5P 5.38922
170 1QF9 ALF 5.38922
171 1QF9 ADP 5.38922
172 2QZ4 ADP 5.38922
173 3W5J GDP 5.38922
174 1BW9 NAD 5.38922
175 2C78 GNP 5.98802
176 2C77 GNP 5.98802
177 1WF3 GNP 5.98802
178 1G7C 5GP 5.98802
179 1F9V ADP 5.98802
180 4KFU ACP 5.98802
181 5LB3 ADP 5.98802
182 1F5N GNP 5.98802
183 1SQ5 ADP 5.98802
184 2B8W ALF 5GP 5.98802
185 4R43 GDP 5.98802
186 2WOJ ADP ALF 5.98802
187 4R2I ANP 5.98802
188 4XTR ATP 5.98802
189 4XVU ATP 5.98802
190 4YS0 ADP 5.98802
191 3ITJ CIT 5.98802
192 5X40 ACP 5.98802
193 4XTR ADP 5.98802
194 3DC4 ADP 5.98802
195 2ZFI ADP 5.98802
196 1G3Q ADP 5.98802
197 1ION ADP 5.98802
198 4Q1A UDP 5.98802
199 4Q1A 2XZ 5.98802
200 6AIC AMP 5.98802
201 3AB4 THR 5.98802
202 1UKG MMA 5.98802
203 1Q8S MAN MMA 5.98802
204 4IOK ADP 5.98802
205 4IOK XPO 5.98802
206 1Z83 AP5 5.98802
207 1O8B ABF 5.98802
208 1UKZ ADP 5.98802
209 2Z48 NGA 5.98802
210 2GMP NAG MAN 5.98802
211 1Q8Q MAN MMA 5.98802
212 4U8P UDP 5.98802
213 3FVQ ATP 5.98802
214 1APZ ASP 6.17284
215 4U00 ADP 6.58683
216 1RRC ADP 6.58683
217 4CVN ADP 6.58683
218 4NON GDP 6.58683
219 2DPY ADP 6.58683
220 1G7S GDP 6.58683
221 3EC1 GDP 6.58683
222 4ZG4 VO4 ADP 6.58683
223 5MZN ADP 6.58683
224 2CHG ANP 6.58683
225 2XAU ADP 6.58683
226 4KBF AMP 6.58683
227 3VX3 ADP 6.58683
228 5T63 ALA ALA ALA ALA 6.58683
229 6B8B ADP 6.58683
230 3AI8 HNQ 6.58683
231 5BQ5 ADP BEF 6.58683
232 3VPD CIT 6.58683
233 1GXU 2HP 6.59341
234 2GNK ATP 7.14286
235 5U32 GDP 7.18563
236 5I0H ADP BEF 7.18563
237 1B0U ATP 7.18563
238 5ZBR ANP 7.18563
239 4QM7 GTP 7.18563
240 5KUT GDP 7.18563
241 2XTN GTP 7.18563
242 4PX9 ADP 7.18563
243 1IWE IMP 7.18563
244 5UIV ADP 7.18563
245 3TBK ANP 7.18563
246 3KTA AP5 7.18563
247 2J5V PCA 7.18563
248 1IHU ADP 7.18563
249 1IHU AF3 7.18563
250 5AK0 8V1 7.18563
251 1G8S MET 7.18563
252 3BER AMP 7.18563
253 2BIF SIN 7.18563
254 2BIF ANP 7.18563
255 6CS8 F9Y 7.18563
256 4U60 SIA GAL NGA 7.18563
257 4U60 SIA 7.18563
258 3COB ADP 7.78443
259 4LC1 GDP 7.78443
260 1XKV ATP 7.78443
261 4FCW ADP 7.78443
262 5L3W GDP 7.78443
263 3IUY AMP 7.78443
264 4NU0 AP5 7.78443
265 5WRI A3P 7.78443
266 5O96 SAM 7.78443
267 5WRJ A3P 7.78443
268 1PTR PRB 8
269 1KK1 GNP 8.38323
270 1TAD GDP 8.38323
271 1TAD ALF 8.38323
272 6AU6 GDP 8.38323
273 1FQK GDP 8.38323
274 2V7Q ADP 8.38323
275 1D2E GDP 8.38323
276 5M04 GDP 8.38323
277 1R6B ADP 8.38323
278 2V7Q ATP 8.38323
279 5Y6N ADP 8.38323
280 2CK3 ANP 8.38323
281 4LJ9 ACP 8.38323
282 1LVK MNT BEF 8.38323
283 6C90 ADP 8.38323
284 2VB6 ADP BEF 8.38323
285 3E70 GDP 8.38323
286 4PFO ADP 8.38323
287 1FQK ALF 8.38323
288 3QKT ANP 8.38323
289 2CK3 ADP 8.38323
290 3K5I AIR 8.38323
291 1P72 ADP 8.38323
292 1W0J ADP 8.38323
293 1W0J ADP BEF 8.38323
294 1W7J ADP BEF 8.60927
295 2ODE ALF GDP 8.98204
296 1BH2 GSP 8.98204
297 1SVK ALF GDP 8.98204
298 4YMU ATP 8.98204
299 1Y3A GDP 8.98204
300 6CRK GDP 8.98204
301 6G14 G4P 8.98204
302 1GP2 GDP 8.98204
303 3TK1 GDP 8.98204
304 2OM2 GDP 8.98204
305 1XMV ADP 8.98204
306 1QHG ATP 8.98204
307 1F2U ATP 9.39597
308 1ONI BEZ 9.42029
309 4AG5 ADP 9.58084
310 2RCN GDP 9.58084
311 6DEF GCP 9.58084
312 2HF9 GSP 9.58084
313 1U0J ADP 9.58084
314 1Z6T ADP 9.58084
315 5Z69 AGS 9.58084
316 1EXF GLY 9.58084
317 3A75 GLU 9.58084
318 3RLF ANP 9.58084
319 2QEN ADP 9.58084
320 5XKT GNP 10.1796
321 2D2F ADP 10.1796
322 1G6O ADP 10.1796
323 1OYY AGS 10.1796
324 4X8O AP5 10.1796
325 4E3Q PMP 10.1796
326 5I34 GDP 10.1796
327 1UAY ADN 10.1796
328 2OG2 MLI 10.7784
329 3B9Q MLI 10.7784
330 5L3R GCP 10.7784
331 3ZQ6 ADP ALF 10.7784
332 2FSH ANP 10.7784
333 1MLY ACZ PLP 10.7784
334 2C9O ADP 10.7784
335 4OI4 ATP 10.7784
336 5BSH PRO 10.7784
337 4TL6 ANP 10.7784
338 2XCU C5P 10.7784
339 1UPT GTP 11.3772
340 1AQU A3P 11.3772
341 4UOX PUT 11.3772
342 4UOX PLP PUT 11.3772
343 3L6C MLI 11.3772
344 6B4K ANP 11.3772
345 5ODQ 9SB 11.4286
346 1R4A GNP 11.5152
347 1FQJ ALF 11.9048
348 1FQJ GDP 11.9048
349 1QF5 GDP 11.976
350 1QF5 RPL 11.976
351 3B7G ANP 11.976
352 4PJ3 ANP 11.976
353 5N69 ADP 11.976
354 4A4Z ANP 11.976
355 4GBM A3P 11.976
356 1GPJ CIT 11.976
357 5NUL FMN 12.3188
358 2ZR9 DTP 12.5749
359 5L3S GNP 12.5749
360 5L3V GDP 12.5749
361 5MEX PAP 12.5749
362 1ZQ9 SAM 12.5749
363 5TWJ SAM 12.963
364 5CK5 GDP 13.1737
365 2CDN ADP 13.1737
366 1G41 ADP 13.1737
367 3DZD ADP 13.1737
368 1LOB MMA 13.4615
369 1CS4 GSP 13.7725
370 1RJ9 GCP 13.7725
371 3P4X ADP 13.7725
372 1XP8 AGS 13.7725
373 1M0S CIT 13.7725
374 4B2D FBP 13.7725
375 2D7D ADP 14.3713
376 1GVF PGH 14.3713
377 1V8K ANP 14.9701
378 3ZIA ADP 14.9701
379 3ZIA ATP 14.9701
380 4H1V GNP 14.9701
381 3IIJ ADP 14.9701
382 5BN3 ADP 14.9701
383 2GJ8 ALF GDP 15.5689
384 2XT3 ADP 15.5689
385 2RI1 GLP 15.5689
386 1M7G AV2 16.1677
387 4B47 GDP 16.1677
388 1DAR GDP 16.1677
389 1KK8 BEF ADP 16.1677
390 2Q8M AMP 16.1677
391 1B7T ADP 16.1677
392 1M7G ADX 16.1677
393 1M7G ADP 16.1677
394 1SQL GUN 16.4384
395 4QOS ADP 16.7665
396 1NST A3P 16.7665
397 3AB3 GDP 17.3653
398 3DEF GDP 17.3653
399 4NCN GTP 17.9641
400 4V0K GDP 17.9641
401 4IDN GNP 17.9641
402 1QHH ATP 17.9641
403 3ZS9 ADP ALF 18.4211
404 4BAS GNP 18.5629
405 1PUJ GNP 18.5629
406 3KJI ADP 18.5629
407 2W58 ADP 19.1617
408 2XTZ GSP 19.7605
409 1H65 GDP 19.7605
410 4HI0 GDP 19.7605
411 4DCT GDP 20.3593
412 3CX8 GSP 20.9581
413 3T12 GDP ALF 20.9581
414 3MD0 GDP 20.9581
415 3T1O GDP 20.9581
416 1FP6 ADP 20.9581
417 2WJG GDP 23.3533
418 2WJH GDP 23.494
419 2WJH FLC 23.494
420 3A4M ADP 23.9521
421 3B5J 12D 23.9521
422 4WZA ACP 23.9521
423 4WZA ADP 23.9521
424 1QAN SAH 23.9521
425 1M2O GNP 25.7485
426 2QTV GNP 25.7485
427 5FG3 GDP 25.7485
428 2ZL4 ALA ALA ALA ALA 26.9461
429 1FZQ GDP 27.5449
430 2IS6 ADP 28.1437
431 1F6B GDP 28.1437
432 3VM7 GLC 28.7425
433 2A5F GTP 29.3413
434 4JLS 3ZE 29.6053
435 1KSH GDP 29.9401
436 4M9Q GNP 30.5389
437 1YRB GDP 30.5389
438 1YZG GDP 30.5389
439 1J2J GTP 31.3253
440 1O3Y GTP 31.3253
441 1RE0 GDP 31.7073
442 1S9D GDP 31.7073
443 5YT0 GDP 31.7365
444 1ZJ6 G3D 32.3353
445 1GOT GDP 32.8767
446 2ZEJ GDP 33.5329
447 4QRH 0O2 33.5329
448 1ZD9 GDP 34.7305
449 5KDO GDP 40.5405
450 4RD0 GDP 41.9162
451 2QN6 GDP 41.9162
452 1NF3 GNP 47.3054
453 1GRN GDP 48.503
454 5UPK GNP 48.503
455 1GRN AF3 48.503
456 4ITR GDP 48.503
457 2NGR GDP 48.503
458 4DID GDP 48.503
459 2NGR AF3 48.503
Pocket No.: 2; Query (leader) PDB : 3X1Z; Ligand: GNP; Similar sites found with APoc: 39
This union binding pocket(no: 2) in the query (biounit: 3x1z.bio2) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 6BJO DUY None
2 5KNK 11A None
3 1ZVX FIN 1.22699
4 3BP1 GUN 2.99401
5 1FNZ A2G 2.99401
6 1OFS SUC 3.59281
7 3THR C2F 3.59281
8 4O48 ASP 3.59281
9 5CGE 51F 3.59281
10 4GYS MLI 4.19162
11 1Y8O ADP 4.19162
12 1UYY BGC BGC 4.58015
13 4BI7 PGA 4.79042
14 4NFE BEN 4.79042
15 1DL5 SAH 4.79042
16 1D8C SOR 5.38922
17 3QDK QDK 5.38922
18 5EYW PGA 5.38922
19 2GMM MAN MAN 5.98802
20 2GN3 MAN 5.98802
21 2GN3 MMA 5.98802
22 2Z49