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Receptor
PDB id Resolution Class Description Source Keywords
4B7J 2.42 Å EC: 3.-.-.- H1N1 2009 PANDEMIC INFLUENZA VIRUS: RESISTANCE OF THE I223R NEURAMINIDASE MUTANT EXPLAINED BY KINETIC AND STRUCTURAL AN INFLUENZA A VIRUS HYDROLASE NEURAMINIDASE INHIBITOR NAI NAIS OSELTAMIVIR ZANAMIVIR ANTIVIRAL RESISTANCE IMMUNOCOMPROMISED H275Y
Ref.: H1N1 2009 PANDEMIC INFLUENZA VIRUS: RESISTANCE OF T NEURAMINIDASE MUTANT EXPLAINED BY KINETIC AND STRUC ANALYSIS PLOS PATHOG. V. 8 2914 2012
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
5AX A:501;
A:511;
A:521;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
205.208 C8 H15 N O5 CC(=O...
CA A:701;
Part of Protein;
none;
submit data
40.078 Ca [Ca+2...
G39 A:1470;
Valid;
none;
Ki = 11.1 nM
284.351 C14 H24 N2 O4 CCC(C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4B7J 2.42 Å EC: 3.-.-.- H1N1 2009 PANDEMIC INFLUENZA VIRUS: RESISTANCE OF THE I223R NEURAMINIDASE MUTANT EXPLAINED BY KINETIC AND STRUCTURAL AN INFLUENZA A VIRUS HYDROLASE NEURAMINIDASE INHIBITOR NAI NAIS OSELTAMIVIR ZANAMIVIR ANTIVIRAL RESISTANCE IMMUNOCOMPROMISED H275Y
Ref.: H1N1 2009 PANDEMIC INFLUENZA VIRUS: RESISTANCE OF T NEURAMINIDASE MUTANT EXPLAINED BY KINETIC AND STRUC ANALYSIS PLOS PATHOG. V. 8 2914 2012
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 253 families.
1 4B7J Ki = 11.1 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
70% Homology Family (33)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 20 families.
1 2HTQ - ZMR C12 H20 N4 O7 CC(=O)N[C@....
2 2HT5 - NDG C8 H15 N O6 CC(=O)N[C@....
3 3O9J - RP6 C14 H21 N O8 CC(=O)N[C@....
4 2HTU - BCZ C15 H28 N4 O4 CCC(CC)[C@....
5 4D8S ic50 = 0.32 uM 0HX C13 H21 N O6 CCC(CC)O[C....
6 2HTR - DAN C11 H17 N O8 CC(=O)N[C@....
7 3O9K - ETT C21 H27 N O8 Cc1ccc(cc1....
8 4M3M - 22N C14 H24 N2 O4 CCC(CC)O[C....
9 4KS4 Ki = 72 nM 1SN C19 H30 N4 O5 CC[C@H](c1....
10 4KS1 Kd = 1.5 nM 2H8 C14 H24 N2 O4 CCC(CC)O[C....
11 4MJU - 27S C16 H23 N3 O5 S CCC(CC)O[C....
12 2HT8 - G39 C14 H24 N2 O4 CCC(CC)O[C....
13 4WA5 ic50 = 1.29 nM ZMR C12 H20 N4 O7 CC(=O)N[C@....
14 4WA4 ic50 = 0.66 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
15 4QN5 - SIA GAL n/a n/a
16 3SAN - ZMR C12 H20 N4 O7 CC(=O)N[C@....
17 3TI8 ic50 = 0.9 nM LNV C13 H22 N4 O7 [H]/N=C(N)....
18 5NZF Ki = 94000 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
19 5NZE Ki = 450 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
20 5NZ4 Ki = 700 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
21 2HU4 - G39 C14 H24 N2 O4 CCC(CC)O[C....
22 3TI6 ic50 = 0.54 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
23 3TI3 ic50 = 1.83 nM LNV C13 H22 N4 O7 [H]/N=C(N)....
24 3TI5 ic50 = 1.11 nM ZMR C12 H20 N4 O7 CC(=O)N[C@....
25 3CL0 Ki = 20.8 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
26 4B7R Ki = 0.23 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
27 3TI4 ic50 = 947 nM LVO C21 H36 N4 O8 [H]/N=C(N)....
28 2HTY - NAG C8 H15 N O6 CC(=O)N[C@....
29 5NWE Ki = 27000 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
30 3CKZ Ki = 0.19 nM ZMR C12 H20 N4 O7 CC(=O)N[C@....
31 5NZN Ki = 220000 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
32 3B7E - ZMR C12 H20 N4 O7 CC(=O)N[C@....
33 4B7J Ki = 11.1 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
50% Homology Family (109)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 15 families.
1 2HTQ - ZMR C12 H20 N4 O7 CC(=O)N[C@....
2 2HT5 - NDG C8 H15 N O6 CC(=O)N[C@....
3 3O9J - RP6 C14 H21 N O8 CC(=O)N[C@....
4 2HTU - BCZ C15 H28 N4 O4 CCC(CC)[C@....
5 4D8S ic50 = 0.32 uM 0HX C13 H21 N O6 CCC(CC)O[C....
6 2HTR - DAN C11 H17 N O8 CC(=O)N[C@....
7 3O9K - ETT C21 H27 N O8 Cc1ccc(cc1....
8 4M3M - 22N C14 H24 N2 O4 CCC(CC)O[C....
9 4KS4 Ki = 72 nM 1SN C19 H30 N4 O5 CC[C@H](c1....
10 4KS1 Kd = 1.5 nM 2H8 C14 H24 N2 O4 CCC(CC)O[C....
11 4MJU - 27S C16 H23 N3 O5 S CCC(CC)O[C....
12 2HT8 - G39 C14 H24 N2 O4 CCC(CC)O[C....
13 1F8E Ki = 15 uM 49A C11 H19 N3 O6 CC(=O)N[C@....
14 4MWW - G39 C14 H24 N2 O4 CCC(CC)O[C....
15 2QWG ic50 = 230 uM G28 C13 H23 N3 O5 CCN(CC)C(=....
16 1INY - EQP C10 H20 N O9 P CC(=O)N[C@....
17 1F8B Ki = 4 uM DAN C11 H17 N O8 CC(=O)N[C@....
18 1XOE ic50 = 41 nM ABX C14 H24 N2 O5 CC(C)C[C@@....
19 4MWX ic50 = 75.7 nM ZMR C12 H20 N4 O7 CC(=O)N[C@....
20 2QWC Ki = 280 uM DAN C11 H17 N O8 CC(=O)N[C@....
21 2QWJ ic50 = 0.23 uM G28 C13 H23 N3 O5 CCN(CC)C(=....
22 2QWI Ki = 2.16 uM G20 C14 H23 N5 O5 [H]/N=C(/N....
23 4MWY ic50 = 89.6 nM LNV C13 H22 N4 O7 [H]/N=C(N)....
24 1L7G - BCZ C15 H28 N4 O4 CCC(CC)[C@....
25 1BJI ic50 = 0.002 uM DPC C20 H27 N3 O5 CCCN(CCc1c....
26 1F8D Ki = 400 uM 9AM C11 H18 N2 O7 CC(=O)N[C@....
27 2QWE Ki = 0.033 uM GNA C12 H22 N4 O7 CC(=O)N[C@....
28 4MWQ ic50 = 0.79 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
29 1NNC - ZMR C12 H20 N4 O7 CC(=O)N[C@....
30 4MX0 ic50 = 184.7 nM BCZ C15 H28 N4 O4 CCC(CC)[C@....
31 2QWB Ki = 1820 uM SIA C11 H19 N O9 CC(=O)N[C@....
32 2QWK ic50 = 0.002 uM G39 C14 H24 N2 O4 CCC(CC)O[C....
33 2QWF Ki = 2.16 uM G20 C14 H23 N5 O5 [H]/N=C(/N....
34 1MWE - SIA C11 H19 N O9 CC(=O)N[C@....
35 4MWR ic50 = 0.41 nM ZMR C12 H20 N4 O7 CC(=O)N[C@....
36 1L7F - BCZ C15 H28 N4 O4 CCC(CC)[C@....
37 1F8C Ki = 0.04 uM 4AM C11 H18 N2 O7 CC(=O)N[C@....
38 4MWU ic50 = 3.24 nM LNV C13 H22 N4 O7 [H]/N=C(N)....
39 5JYY - 6PY C16 H27 N5 O9 [H]/N=C(N)....
40 2QWD Ki = 14 uM 4AM C11 H18 N2 O7 CC(=O)N[C@....
41 2QWH ic50 = 13 uM G39 C14 H24 N2 O4 CCC(CC)O[C....
42 4WEG - DF4 C11 H16 F N O8 CC(=O)N[C@....
43 4MWV ic50 = 0.4 nM BCZ C15 H28 N4 O4 CCC(CC)[C@....
44 4DGR ic50 = 4.4 uM 3LV C20 H30 N2 O5 CCCN(CCC)C....
45 1L7H - BCZ C15 H28 N4 O4 CCC(CC)[C@....
46 4GZP Ki = 14.3 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
47 4GZT Ki = 17 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
48 4GZX - SIA C11 H19 N O9 CC(=O)N[C@....
49 4GZW Kd = 30 uM NAG SIA GAL n/a n/a
50 4GZQ - SIA C11 H19 N O9 CC(=O)N[C@....
51 6BR6 Kd = 3245 nM E3M C10 H20 N2 O8 S CC(=O)N[C@....
52 6BR5 ic50 = 19.9 nM GYG C11 H22 N4 O8 S [H]/N=C(/N....
53 1B9T ic50 = 8 uM RAI C14 H18 N4 O5 c1cc(c(cc1....
54 1IVB - ST1 C9 H8 N2 O6 CC(=O)Nc1c....
55 1A4Q ic50 = 3.6 uM DPC C20 H27 N3 O5 CCCN(CCc1c....
56 1NSC - SIA C11 H19 N O9 CC(=O)N[C@....
57 1A4G ic50 = 0.004 uM ZMR C12 H20 N4 O7 CC(=O)N[C@....
58 1INV - EQP C10 H20 N O9 P CC(=O)N[C@....
59 1B9S ic50 = 667 uM FDI C15 H20 N2 O4 CCC(CC)C(=....
60 3K37 ic50 = 2.8 nM BCZ C15 H28 N4 O4 CCC(CC)[C@....
61 1VCJ ic50 = 26 uM IBA C18 H27 N3 O4 CCC(CC)Nc1....
62 1B9V ic50 = 224 uM RA2 C18 H26 N2 O5 CCC(CC)Nc1....
63 1NSD - DAN C11 H17 N O8 CC(=O)N[C@....
64 4H53 - SLB C11 H19 N O9 CC(=O)N[C@....
65 4K1I - G39 C14 H24 N2 O4 CCC(CC)O[C....
66 4K1J - G39 C14 H24 N2 O4 CCC(CC)O[C....
67 4K1K - G39 C14 H24 N2 O4 CCC(CC)O[C....
68 1ING - ST5 C11 H12 N2 O5 CC(=O)Nc1c....
69 1INH - ST6 C11 H14 N3 O4 CC(=O)Nc1c....
70 1IVF - DAN C11 H17 N O8 CC(=O)N[C@....
71 1IVE - ST3 C9 H10 N2 O3 CC(=O)Nc1c....
72 1INX - EQP C10 H20 N O9 P CC(=O)N[C@....
73 1INW - AXP C10 H20 N O9 P CC(=O)N[C@....
74 2BAT - SIA C11 H19 N O9 CC(=O)N[C@....
75 1IVC - ST2 C9 H10 N2 O4 CC(=O)Nc1c....
76 1IVD - ST1 C9 H8 N2 O6 CC(=O)Nc1c....
77 4QN6 - LNV C13 H22 N4 O7 [H]/N=C(N)....
78 4WA5 ic50 = 1.29 nM ZMR C12 H20 N4 O7 CC(=O)N[C@....
79 4WA4 ic50 = 0.66 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
80 4QN5 - SIA GAL n/a n/a
81 3SAN - ZMR C12 H20 N4 O7 CC(=O)N[C@....
82 3TI8 ic50 = 0.9 nM LNV C13 H22 N4 O7 [H]/N=C(N)....
83 5NZF Ki = 94000 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
84 5NZE Ki = 450 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
85 5NZ4 Ki = 700 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
86 2HU4 - G39 C14 H24 N2 O4 CCC(CC)O[C....
87 3TI6 ic50 = 0.54 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
88 3TI3 ic50 = 1.83 nM LNV C13 H22 N4 O7 [H]/N=C(N)....
89 3TI5 ic50 = 1.11 nM ZMR C12 H20 N4 O7 CC(=O)N[C@....
90 3CL0 Ki = 20.8 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
91 4B7R Ki = 0.23 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
92 3TI4 ic50 = 947 nM LVO C21 H36 N4 O8 [H]/N=C(N)....
93 2HTY - NAG C8 H15 N O6 CC(=O)N[C@....
94 5NWE Ki = 27000 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
95 3CKZ Ki = 0.19 nM ZMR C12 H20 N4 O7 CC(=O)N[C@....
96 5NZN Ki = 220000 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
97 3B7E - ZMR C12 H20 N4 O7 CC(=O)N[C@....
98 4CPN - ZMR C12 H20 N4 O7 CC(=O)N[C@....
99 4CPY Ki = 491.35 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
100 4CPZ Ki = 20.85 nM ZMR C12 H20 N4 O7 CC(=O)N[C@....
101 4B7J Ki = 11.1 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
102 4QN7 ic50 = 0.84 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
103 3TIC ic50 = 1.36 nM ZMR C12 H20 N4 O7 CC(=O)N[C@....
104 3TIA ic50 = 3.12 nM LNV C13 H22 N4 O7 [H]/N=C(N)....
105 3TIB ic50 = 129 nM LVO C21 H36 N4 O8 [H]/N=C(N)....
106 4HZZ ic50 = 8.31 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
107 4I00 - ZMR C12 H20 N4 O7 CC(=O)N[C@....
108 4HZW ic50 = 1.31 nM LNV C13 H22 N4 O7 [H]/N=C(N)....
109 4HZX ic50 = 0.5 nM G39 C14 H24 N2 O4 CCC(CC)O[C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: G39; Similar ligands found: 3
No: Ligand ECFP6 Tc MDL keys Tc
1 22N 1 1
2 G39 1 1
3 2H8 0.5 0.911111
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4B7J; Ligand: G39; Similar sites found with APoc: 36
This union binding pocket(no: 1) in the query (biounit: 4b7j.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
1 1WCQ DAN 1.27932
2 1EUS DAN 1.64384
3 5B2D SLT 2.1322
4 6CAM BGC 2.25989
5 2YA8 G39 2.34542
6 1MS9 LAT 2.34542
7 5M1Z 6LW AHR 2.45232
8 1W0O DAN 2.55864
9 4YZ5 DAN 2.65879
10 3WN0 FUB 2.73973
11 3ZXR IQ1 2.98507
12 3ZXR P3S 2.98507
13 3OVR 5SP 3.07018
14 4X6K 3XR 3.41151
15 1N1V DAN 3.62473
16 1VQ2 DDN 3.62694
17 1USR DAN 3.74449
18 3LJU IP9 3.88601
19 5FLJ QUE 4.30108
20 3VSS FRU 4.47761
21 1Y9G FRU 4.47761
22 2ZRU FMN 4.61957
23 4A1O AMZ 4.69083
24 2BF6 SIA 4.90405
25 5KV9 I57 5.02283
26 2VW1 DAN 5.11727
27 2SIM DAN 5.24934
28 1Z4V DAN 5.54371
29 6CED EYA 5.60748
30 5DEQ ARA 6.14035
31 3OH3 UAD 6.18337
32 5TPV TYD 6.53595
33 1U0A BGC BGC BGC BGC 6.54206
34 4SLI CNP 7.46269
35 2P7Q GG6 8.27068
36 6AYU MLI 10.0865
Pocket No.: 2; Query (leader) PDB : 4B7J; Ligand: G39; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 4b7j.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 4B7J; Ligand: G39; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 4b7j.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 4B7J; Ligand: G39; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 4b7j.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
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