Receptor
PDB id Resolution Class Description Source Keywords
4CTE 1.8 Å EC: 3.2.1.39 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF THE MODULAR LAM ZGLAMC MUTANT E142S IN COMPLEX WITH A THIO-OLIGOSACCHARIDE ZOBELLIA GALACTANIVORANS HYDROLASE GLYCOSIDE HYDROLASE FAMILLY GH16 MARINE BACTERIATHIO-OLIGOSACCHARIDE COMPLEX
Ref.: STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF THE LAMINARINA ZGLAMC[GH16] FROM ZOBELLIA GALACTANIVORA SUGGESTS PREFERRED RECOGNITION OF BRANCHED LAMINARI ACTA CRYSTALLOGR.,SECT.D V. 71 173 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CA A:260;
B:280;
 Part of Protein;
Part of Protein;
 none;
none;
 submit data
40.078 Ca [Ca+2...
CL A:261;
B:281;
 Invalid;
Invalid;
 none;
none;
 submit data
35.453 Cl [Cl-]
GS1 GS1 C:1;
 Valid;
 none;
 submit data
n/a n/a
GOL B:284;
A:284;
 Invalid;
Invalid;
 none;
none;
 submit data
92.094 C3 H8 O3 C(C(C...
ACT B:282;
 Invalid;
 none;
 submit data
59.044 C2 H3 O2 CC(=O...
GS1 GS1 BGC D:1;
 Valid;
 none;
 submit data
n/a n/a
EDO A:263;
B:283;
 Invalid;
Invalid;
 none;
none;
 submit data
62.068 C2 H6 O2 C(CO)...
NA B:285;
 Part of Protein;
 none;
 submit data
22.99 Na [Na+]
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4CTE 1.8 Å EC: 3.2.1.39 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF THE MODULAR LAM ZGLAMC MUTANT E142S IN COMPLEX WITH A THIO-OLIGOSACCHARIDE ZOBELLIA GALACTANIVORANS HYDROLASE GLYCOSIDE HYDROLASE FAMILLY GH16 MARINE BACTERIATHIO-OLIGOSACCHARIDE COMPLEX
Ref.: STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF THE LAMINARINA ZGLAMC[GH16] FROM ZOBELLIA GALACTANIVORA SUGGESTS PREFERRED RECOGNITION OF BRANCHED LAMINARI ACTA CRYSTALLOGR.,SECT.D V. 71 173 2015
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 5 families.
1 4CTE - GS1 GS1 n/a n/a
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 271 families.
1 6M6P Kd = 28.7 uM GLC BGC BGC BGC n/a n/a
2 4CTE - GS1 GS1 n/a n/a
50% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3B00 - 16A C19 H42 N CCCCCCCCCC....
2 3AZZ - LGC C6 H10 O6 C([C@@H]1[....
3 6M6P Kd = 28.7 uM GLC BGC BGC BGC n/a n/a
4 4BPZ - GLC BGC BGC n/a n/a
5 4BOW - GLC BGC BGC n/a n/a
6 4CTE - GS1 GS1 n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: GS1 GS1; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Ligand no: 2; Ligand: GS1 GS1 BGC; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: GS1 GS1; Similar ligands found: 22
No: Ligand Similarity coefficient
1 GS1 GS1 1.0000
2 BGC BGC 0.9222
3 GLC BGC 0.8911
4 PA1 GCS 0.8883
5 NAB 0.8836
6 SHG BGC 0.8737
7 MYC 0.8736
8 LU2 0.8716
9 IDC 0.8685
10 GCS GCS 0.8678
11 IIH 0.8672
12 NKH 0.8640
13 BGC GAL 0.8637
14 OUG 0.8631
15 7FZ 0.8614
16 B06 0.8606
17 XYP XYP 0.8602
18 HBO BGC 0.8600
19 GLC GLC 0.8593
20 SGC BGC 0.8566
21 0HV 0.8563
22 QUE 0.8552
Ligand no: 2; Ligand: GS1 GS1 BGC; Similar ligands found: 3
No: Ligand Similarity coefficient
1 GS1 GS1 BGC 1.0000
2 BGC BGC BGC 0.9103
3 GAL GAL GAL 0.8928
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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