Receptor
PDB id Resolution Class Description Source Keywords
4DKX 1.9 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE RAB 6A'(Q72L) HOMO SAPIENS GTP BINDING FOLD MEMBRANE TRAFFICKING GTP CYTOSOL PROTEITRANSPORT
Ref.: CRYSTAL STRUCTURE OF RAB6A'(Q72L) MUTANT REVEALS UN GDP/MG2+ BINDING WITH OPENED GTP-BINDING DOMAIN BIOCHEM.BIOPHYS.RES.COMMUN. V. 424 269 2012
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GDP A:301;
B:302;
Valid;
Valid;
none;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
MG A:302;
B:301;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4DKX 1.9 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE RAB 6A'(Q72L) HOMO SAPIENS GTP BINDING FOLD MEMBRANE TRAFFICKING GTP CYTOSOL PROTEITRANSPORT
Ref.: CRYSTAL STRUCTURE OF RAB6A'(Q72L) MUTANT REVEALS UN GDP/MG2+ BINDING WITH OPENED GTP-BINDING DOMAIN BIOCHEM.BIOPHYS.RES.COMMUN. V. 424 269 2012
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (8)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
5 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
6 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
50% Homology Family (246)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
19 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
27 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
36 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
40 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
41 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
45 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
47 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
49 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
57 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
61 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
78 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
81 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
84 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
85 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
87 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
88 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
91 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
92 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
93 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
94 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
97 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
99 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
101 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
102 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
104 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
109 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
112 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
114 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
118 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
124 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
126 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
127 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
130 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
133 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
134 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
135 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
138 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
140 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
145 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
150 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
151 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
152 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
153 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
154 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
155 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
156 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
157 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
158 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
163 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
164 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
165 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
168 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 1N6K - GDP AF3 n/a n/a
170 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
171 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
172 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
174 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
175 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
178 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
179 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
181 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
183 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
185 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
186 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
187 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
188 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
189 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
190 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
191 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
192 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
193 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
194 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
197 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
201 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
203 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
207 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
208 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
209 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
210 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
211 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
214 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
215 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
216 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
221 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
225 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
227 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
228 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
229 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
230 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
231 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
232 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
234 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
235 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
236 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
237 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
238 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
239 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
241 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
242 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
243 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
244 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
245 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 153
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 GNP 0.839506 0.973684
6 G 0.828947 0.986486
7 5GP 0.828947 0.986486
8 G1R 0.82716 0.986667
9 GCP 0.82716 0.973684
10 GSP 0.817073 0.948718
11 GAV 0.797619 0.961039
12 GMV 0.792683 0.973684
13 G2P 0.77381 0.961039
14 G2R 0.770115 0.961039
15 GDP MG 0.759036 0.923077
16 GP2 0.756098 0.961039
17 GDP BEF 0.75 0.9
18 GDD 0.747253 0.961039
19 GKE 0.747253 0.961039
20 GDC 0.747253 0.961039
21 GPG 0.741573 0.961039
22 G3D 0.732558 0.986486
23 ALF 5GP 0.729412 0.888889
24 Y9Z 0.728261 0.902439
25 GTP MG 0.724138 0.923077
26 BEF GDP 0.724138 0.888889
27 G5P 0.723404 0.973684
28 GFB 0.72043 0.961039
29 GTG 0.72043 0.936709
30 GDR 0.72043 0.961039
31 G4P 0.715909 0.986486
32 GCP G 0.715909 0.935065
33 6CK 0.712766 0.936709
34 G3A 0.712766 0.973684
35 GDP ALF 0.7 0.888889
36 GDP AF3 0.7 0.888889
37 YGP 0.698925 0.901235
38 JB2 0.697917 0.961039
39 GKD 0.697917 0.961039
40 GDX 0.690722 0.973684
41 GPD 0.690722 0.925
42 GMP 0.684211 0.88
43 0O2 0.666667 0.986486
44 G G 0.659574 0.935065
45 JB3 0.656863 0.948718
46 NGD 0.650485 0.961039
47 GDP 7MG 0.636364 0.911392
48 DGI 0.636364 0.923077
49 U2G 0.634615 0.936709
50 GPX 0.634409 0.946667
51 IDP 0.632184 0.972973
52 2MD 0.632075 0.891566
53 CAG 0.62963 0.880952
54 CG2 0.622642 0.936709
55 FEG 0.619048 0.879518
56 MGD 0.614679 0.891566
57 ZGP 0.613208 0.869048
58 GH3 0.612903 0.973333
59 3GP 0.611765 0.946667
60 MD1 0.607143 0.891566
61 PGD 0.59292 0.925
62 DGT 0.591398 0.923077
63 BGO 0.588785 0.924051
64 TPG 0.582609 0.840909
65 DBG 0.582609 0.948718
66 2GP 0.574713 0.96
67 FE9 0.570175 0.776596
68 I2C FE2 CMO CMO 0.566372 0.808989
69 G A A A 0.553571 0.923077
70 MGP 0.553191 0.961039
71 U A G G 0.548673 0.935065
72 G4M 0.548387 0.880952
73 6G0 0.547368 0.961039
74 G1R G1R 0.542373 0.924051
75 P2G 0.527473 0.883117
76 PGD O 0.525 0.850575
77 ADP 0.522222 0.92
78 GGM 0.517544 0.901235
79 DG 0.516484 0.910256
80 DGP 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G G U 0.509259 0.935065
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 G C 0.504348 0.9
86 GPC 0.491525 0.879518
87 G7M 0.483871 0.948052
88 6AD 0.479592 0.841463
89 ATP 0.473684 0.92
90 G2Q 0.471154 0.961039
91 U G A 0.469697 0.888889
92 5FA 0.46875 0.92
93 AQP 0.46875 0.92
94 GTA 0.468468 0.936709
95 7DD 0.468085 0.906667
96 G G G RPC 0.466102 0.875
97 SGP 0.463158 0.82716
98 01G 0.462963 0.902439
99 B4P 0.457447 0.894737
100 AP5 0.457447 0.894737
101 A2D 0.456522 0.894737
102 G G G C 0.455285 0.9125
103 ACQ 0.454545 0.896104
104 5GP 5GP 0.454545 0.883117
105 ANP 0.454545 0.896104
106 A G C C 0.451613 0.911392
107 APC G U 0.45082 0.886076
108 G U34 0.449153 0.888889
109 DG DG 0.448598 0.865854
110 ITT 0.447917 0.868421
111 BA3 0.446809 0.894737
112 35G 0.444444 0.933333
113 C2E 0.444444 0.921053
114 PCG 0.444444 0.933333
115 MGO 0.441176 0.864198
116 AN2 0.4375 0.907895
117 G C C C 0.4375 0.924051
118 M33 0.43299 0.883117
119 UCG 0.429688 0.911392
120 A G U 0.42963 0.888889
121 ACP 0.428571 0.896104
122 MGQ 0.424528 0.935897
123 7DT 0.424242 0.906667
124 APR 0.424242 0.894737
125 AR6 0.424242 0.894737
126 93A 0.42268 0.833333
127 A4P 0.420168 0.869048
128 SAP 0.42 0.873418
129 AD9 0.42 0.896104
130 AGS 0.42 0.873418
131 G8D 0.42 0.875
132 CA0 0.418367 0.896104
133 ATF 0.417476 0.884615
134 AGO 0.414634 0.888889
135 NIA 0.413043 0.82716
136 MGV 0.412844 0.890244
137 TAT 0.411765 0.884615
138 A1R 0.411215 0.839506
139 ADQ 0.411215 0.871795
140 RGT 0.410714 0.909091
141 CGP 0.409836 0.86747
142 AMP 0.408602 0.893333
143 A 0.408602 0.893333
144 UP5 0.40678 0.873418
145 C2R 0.406593 0.906667
146 AMZ 0.406593 0.918919
147 JBT 0.405882 0.778947
148 A22 0.40566 0.907895
149 25L 0.405405 0.907895
150 ADX 0.40404 0.809524
151 8OD 0.401961 0.946667
152 4TC 0.4 0.851852
153 50T 0.4 0.883117
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4DKX; Ligand: GDP; Similar sites found: 448
This union binding pocket(no: 1) in the query (biounit: 4dkx.bio2) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4M9Q GNP 0.00000000002666 0.83308 None
2 3W5J GDP 0.00000008977 0.56986 None
3 1F9V ADP 0.00000309 0.52355 None
4 1JI0 ATP 0.00001095 0.51229 None
5 4QM7 GTP 0.00006955 0.50188 None
6 1S3G AP5 0.0006441 0.49787 0.925926
7 4QRH 0O2 0.00304 0.43882 0.925926
8 1E2K TMC 0.00004276 0.55881 1.38889
9 2CE7 ADP 0.00003666 0.52111 1.38889
10 1DAK DPU 0.0002769 0.51924 1.38889
11 2BEK ATP 0.0004433 0.50379 1.38889
12 1DAK ADP 0.005059 0.48191 1.38889
13 2Z5F A3P 0.002142 0.44619 1.38889
14 2ZPT A3P 0.02048 0.43067 1.38889
15 3QVV A3P 0.01996 0.42237 1.38889
16 3QVV 3QV 0.01996 0.42237 1.38889
17 2OFW ADX 0.0001629 0.52747 1.44231
18 1XX6 ADP 0.0005127 0.46144 1.57068
19 2PEZ DAT 0.00008908 0.53223 1.67598
20 2PEZ GGZ 0.00008908 0.53223 1.67598
21 2ZE7 AMP 0.002132 0.45349 1.85185
22 2ZE7 DST 0.002299 0.45349 1.85185
23 2D7D ADP 0.001315 0.44237 1.85185
24 1VKJ A3P 0.008294 0.41765 1.85185
25 1YZG GDP 0.00000000004243 0.79683 2.23464
26 4H1V GNP 0.0000000831 0.65338 2.31481
27 4GOX A3P 0.00006628 0.52384 2.31481
28 4BFW ZVW 0.0005953 0.49963 2.31481
29 5WRJ A3P 0.0008909 0.47045 2.31481
30 5WRI A3P 0.0008829 0.46687 2.31481
31 4IEE AGS 0.0005706 0.45159 2.31481
32 1G3M PCQ 0.006068 0.44635 2.31481
33 1G3M A3P 0.006068 0.44635 2.31481
34 3BER AMP 0.008339 0.4049 2.31481
35 5EP2 AZU 0.01692 0.40256 2.31481
36 5KUT GDP 0.0000000008761 0.73509 2.6455
37 4V24 GYR 0.02037 0.41264 2.69542
38 1D2E GDP 0.00000000007752 0.79409 2.77778
39 1G7C 5GP 0.00000001463 0.67326 2.77778
40 5L3V GDP 0.0000002049 0.62763 2.77778
41 3FWY ADP 0.000001493 0.59329 2.77778
42 2QZ4 ADP 0.00001635 0.53769 2.77778
43 3VX3 ADP 0.00002674 0.53592 2.77778
44 3QXC ATP 0.0001296 0.51549 2.77778
45 4IDN GNP 0.00008868 0.51548 2.77778
46 1XP8 AGS 0.00002612 0.51026 2.77778
47 4P32 ADP 0.0001259 0.50806 2.77778
48 2FAH GDP 0.00008719 0.50608 2.77778
49 3B7G ANP 0.0003859 0.47006 2.77778
50 3TBK ANP 0.0005689 0.44247 2.77778
51 1J99 AND 0.007576 0.43574 2.77778
52 1T8U A3P 0.003609 0.4352 2.77778
53 3B9Q MLI 0.00001394 0.43269 2.77778
54 1T8U UAP SGN IDS SGN 0.01221 0.43162 2.77778
55 2OG2 MLI 0.0000066 0.42269 2.77778
56 3VPB ADP 0.02472 0.40067 2.77778
57 4X8O AP5 0.001067 0.49192 2.80374
58 1KO8 6PG 0.0001297 0.50287 2.85714
59 1UKZ ADP 0.0005167 0.49503 2.95567
60 2HCJ GDP 0.000000000003281 0.81858 3.24074
61 4RD0 GDP 0.00000000005899 0.81628 3.24074
62 1D8T GDP 0.00000000001415 0.81376 3.24074
63 2BVN GNP 0.00000000004752 0.80421 3.24074
64 1AZT GSP 0.000000002257 0.75717 3.24074
65 4LC1 GDP 0.000000001079 0.72603 3.24074
66 1TQ4 GDP 0.0000000004606 0.61987 3.24074
67 1IWE IMP 0.0001486 0.57187 3.24074
68 2QEN ADP 0.00000437 0.57096 3.24074
69 1P72 ADP 0.00005497 0.54284 3.24074
70 3A4M ADP 0.000003832 0.53409 3.24074
71 1X6V ADP 0.000109 0.52283 3.24074
72 5X40 ACP 0.000149 0.50662 3.24074
73 1OXV ANP 0.00003028 0.50617 3.24074
74 3FYH ADP 0.0001952 0.50288 3.24074
75 2B8W ALF 5GP 0.0002383 0.49862 3.24074
76 1L2T ATP 0.0003007 0.49365 3.24074
77 1B0U ATP 0.0001705 0.49221 3.24074
78 2JLR ANP 0.0002907 0.48119 3.24074
79 2WHX ADP 0.00003811 0.47791 3.24074
80 2GDJ ANP 0.0002341 0.47731 3.24074
81 4WOP CTP 0.0005517 0.47475 3.24074
82 3BFX A3P 0.0008909 0.46256 3.24074
83 2PL3 ADP 0.0004229 0.45718 3.24074
84 5TIV A3P 0.007239 0.44639 3.24074
85 1OFH ADP 0.00004328 0.5177 3.44828
86 2W58 ADP 0.0000004225 0.51464 3.46535
87 2QG6 NMN 0.0005218 0.48716 3.51759
88 1Z83 AP5 0.0009332 0.48199 3.57143
89 1H65 GDP 0.000000575 0.62204 3.7037
90 3ZS9 ADP ALF 0.0000196 0.55619 3.7037
91 4XTR ATP 0.00001704 0.55271 3.7037
92 4XTR ADP 0.00001198 0.55271 3.7037
93 2WOJ ADP ALF 0.00002349 0.55229 3.7037
94 4XVU ATP 0.0000206 0.54868 3.7037
95 5I34 GDP 0.00001102 0.54258 3.7037
96 4D81 ADP 0.00002833 0.52932 3.7037
97 3DZD ADP 0.000251 0.48422 3.7037
98 5LB3 ADP 0.0002306 0.46979 3.7037
99 4TMK T5A 0.009225 0.43138 3.7037
100 1H74 ILE 0.0222 0.41072 3.7037
101 3IUY AMP 0.008062 0.40559 3.7037
102 1JJV ATP 0.00005209 0.47919 3.8835
103 2ZFI ADP 0.00002315 0.52415 4.09836
104 1SKQ GDP 0.0000000000925 0.75558 4.16667
105 4R98 GNH 0.0000000206 0.66633 4.16667
106 3ZQ6 ADP ALF 0.00001475 0.56231 4.16667
107 1FNN ADP 0.00005623 0.52037 4.16667
108 2BIF ANP 0.0001667 0.51997 4.16667
109 2BIF SIN 0.0002822 0.51997 4.16667
110 1YTM ATP 0.0000743 0.51693 4.16667
111 4ZG4 VO4 ADP 0.0001011 0.51486 4.16667
112 4YMU ATP 0.00002165 0.51284 4.16667
113 1CR1 TTP 0.00009064 0.51275 4.16667
114 1XKV ATP 0.00006884 0.50817 4.16667
115 1ZIN AP5 0.0004187 0.50754 4.16667
116 1OS1 PYR 0.00024 0.50732 4.16667
117 1OS1 ATP 0.0002225 0.50732 4.16667
118 1KK8 BEF ADP 0.00009626 0.50664 4.16667
119 1B7T ADP 0.0001664 0.49004 4.16667
120 1RRC ADP 0.000007552 0.4895 4.16667
121 4IHQ ADP 0.00009769 0.4849 4.16667
122 3DKP ADP 0.0002902 0.47296 4.16667
123 1AQU A3P 0.002271 0.44087 4.16667
124 1BO4 COA 0.003528 0.42236 4.16667
125 4ITM ATP 0.01159 0.41706 4.16667
126 3BD9 A3P 0.00987 0.40386 4.16667
127 4KFU ACP 0.000002229 0.52938 4.24528
128 1M7G ADX 0.00001825 0.56532 4.2654
129 1M7G AV2 0.000001565 0.56532 4.2654
130 1M7G ADP 0.00003019 0.55072 4.2654
131 2RGX AP5 0.0007884 0.4956 4.36893
132 1VHT BA3 0.0004053 0.47176 4.58716
133 1G7S GDP 0.00000000006208 0.78907 4.62963
134 1IHU ADP 0.000002831 0.59086 4.62963
135 1IHU AF3 0.000002511 0.59086 4.62963
136 2VVG ADP 0.0000002587 0.52665 4.62963
137 3ZFD ANP 0.00002845 0.52632 4.62963
138 2ZPA ADP 0.00005262 0.52176 4.62963
139 4AG5 ADP 0.000008942 0.50244 4.62963
140 3FB4 AP5 0.0006587 0.49736 4.62963
141 4MKF AP5 0.0008253 0.49344 4.62963
142 1U0J ADP 0.00007234 0.49062 4.62963
143 4GBM A3P 0.0003392 0.48913 4.62963
144 4YS0 ADP 0.001368 0.45142 4.62963
145 2FSH ANP 0.002527 0.42211 4.62963
146 5MZN ADP 0.001907 0.42127 4.62963
147 1OYY AGS 0.009732 0.40176 4.62963
148 4KOT CE3 0.03649 0.40581 4.93827
149 1PUJ GNP 0.0000000001812 0.77655 5.09259
150 1Y3A GDP 0.000000007584 0.71675 5.09259
151 5L3R GCP 0.0000003839 0.63597 5.09259
152 1W0J ADP 0.000003495 0.57257 5.09259
153 3COB ADP 0.000000625 0.53228 5.09259
154 4HSE ADP 0.00002366 0.527 5.09259
155 1Z6T ADP 0.00007129 0.51289 5.09259
156 2DPY ADP 0.00009412 0.51003 5.09259
157 2AWN ADP 0.0000001508 0.5097 5.09259
158 4TTQ ATP 0.00005893 0.50523 5.09259
159 2CK3 ADP 0.0002005 0.5003 5.09259
160 1W0J ADP BEF 0.0001753 0.49657 5.09259
161 2C04 GCP 0.00001171 0.49382 5.09259
162 2CK3 ANP 0.0002036 0.49345 5.09259
163 3MGB PAP 0.005032 0.4282 5.09259
164 3RC3 ANP 0.00264 0.42104 5.09259
165 2JJK R15 0.03587 0.41148 5.09259
166 4CVN ADP 0.000005953 0.52721 5.10949
167 2GJ8 ALF GDP 0.0000000002701 0.79738 5.23256
168 2QQ0 ANP 0.0001613 0.51918 5.43478
169 2QQ0 THM 0.0001394 0.51918 5.43478
170 2QQ0 TMP 0.000191 0.51546 5.43478
171 4BAS GNP 0.000000004303 0.72556 5.52764
172 2RCN GDP 0.000000000001994 0.85342 5.55556
173 4DCT GDP 0.000000000004601 0.84214 5.55556
174 2C78 GNP 0.00000000008641 0.80821 5.55556
175 2C77 GNP 0.0000000001667 0.79058 5.55556
176 2XTZ GSP 0.0000000009245 0.76786 5.55556
177 1SVK ALF GDP 0.000000002105 0.76131 5.55556
178 3EC1 GDP 0.0000000003513 0.75373 5.55556
179 4P4T GDP 0.000000003515 0.72289 5.55556
180 1GP2 GDP 0.000000009185 0.71267 5.55556
181 5KDO GDP 0.00000001513 0.69574 5.55556
182 3A1S GDP 0.00000002438 0.66726 5.55556
183 1QF5 GDP 0.00008499 0.554 5.55556
184 5HR5 ADP 0.00004653 0.52176 5.55556
185 1R6B ADP 0.00003199 0.52085 5.55556
186 3P4X ADP 0.0000215 0.51485 5.55556
187 2CHG ANP 0.00009031 0.50797 5.55556
188 3NHB ADP 0.000007013 0.50682 5.55556
189 3DC4 ADP 0.00001752 0.50346 5.55556
190 4NU0 AP5 0.0005365 0.49953 5.55556
191 2GMV UN8 0.0008833 0.47576 5.55556
192 1NHX PEP 0.002552 0.47006 5.55556
193 1NHX FTB 0.002869 0.4684 5.55556
194 2GMV PEP 0.001521 0.46702 5.55556
195 1NST A3P 0.000976 0.45845 5.55556
196 1QF5 RPL 0.01768 0.45726 5.55556
197 1OE0 TTP 0.005388 0.4351 5.55556
198 2D2F ADP 0.00007418 0.42627 5.55556
199 5HR5 FLC 0.01879 0.41443 5.55556
200 1QHG ATP 0.01376 0.40131 5.55556
201 2F3R G5P 0.01449 0.42018 5.7971
202 1KUV CA5 0.03464 0.40081 5.7971
203 2WIC GNP 0.000000002952 0.71031 5.99251
204 3UIE ANP 0.00001798 0.53574 6
205 2A5F GTP 0.0000000003801 0.78371 6.01852
206 3MD0 GDP 0.00000000007445 0.75829 6.01852
207 3TK1 GDP 0.000000000052 0.7445 6.01852
208 1CS4 GSP 0.000000003584 0.74444 6.01852
209 3DEF GDP 0.0000001907 0.6327 6.01852
210 3E70 GDP 0.0000004545 0.6076 6.01852
211 1NJF AGS 0.00001305 0.556 6.01852
212 1NJF ADP 0.0000104 0.55567 6.01852
213 1ION ADP 0.00004276 0.51795 6.01852
214 5TSH ANP 0.00003211 0.51752 6.01852
215 3BOS CDP 0.0000493 0.50884 6.01852
216 1W5T ANP 0.0002841 0.48871 6.01852
217 5TSH ADP 0.00004163 0.47901 6.01852
218 1D2N ANP 0.000547 0.47493 6.01852
219 1W5T ADP 0.0007422 0.46415 6.01852
220 4A4Z ANP 0.001111 0.44578 6.01852
221 4PJ3 ANP 0.002641 0.43554 6.01852
222 1EP2 ORO 0.02029 0.41608 6.01852
223 2V7Q ATP 0.00000298 0.57265 6.06061
224 2V7Q ADP 0.00009868 0.4948 6.06061
225 2VBQ BSJ 0.02708 0.40959 6.06061
226 1QF9 C5P 0.001253 0.47935 6.18557
227 1QF9 ALF 0.001253 0.47935 6.18557
228 1QF9 ADP 0.001253 0.47935 6.18557
229 4HUT ATP 0.009852 0.42618 6.28272
230 5GJC ATP 0.0001675 0.48409 6.33484
231 2JAQ DCP 0.004176 0.43573 6.34146
232 5BQ5 ADP BEF 0.00001885 0.53477 6.34921
233 4NCN GTP 0.00000000003775 0.82946 6.48148
234 2XTN GTP 0.0000003344 0.63627 6.48148
235 5L3S GNP 0.0000004703 0.63163 6.48148
236 5L3W GDP 0.00000137 0.58862 6.48148
237 1SQ5 ADP 0.000009489 0.54563 6.48148
238 4NE2 SH2 0.00009086 0.5378 6.48148
239 4NE2 ADP 0.00007966 0.5378 6.48148
240 1IN4 ADP 0.00002499 0.53734 6.48148
241 3TMK T5A 0.00007409 0.53121 6.48148
242 1V8K ANP 0.0000327 0.51716 6.48148
243 4PFO ADP 0.0001783 0.50675 6.48148
244 2VB6 ADP BEF 0.0001524 0.50613 6.48148
245 4R43 GDP 0.00006933 0.50194 6.48148
246 2IS6 ADP 0.0000966 0.49523 6.48148
247 2XAU ADP 0.0001997 0.48629 6.48148
248 2GWH A3P 0.004314 0.4275 6.48148
249 2GK6 ADP 0.00168 0.42225 6.48148
250 3T12 GDP ALF 0.000000002154 0.74019 6.56566
251 3T1O GDP 0.000000001535 0.72814 6.56566
252 1SVI GDP 0.00000000008094 0.75857 6.66667
253 3H86 AP5 0.000106 0.53148 6.77083
254 1NRJ GTP 0.00000000332 0.72765 6.88073
255 4NON GDP 0.0000000003826 0.79286 6.94444
256 5HCN GCP 0.0000000002156 0.76368 6.94444
257 1TAD ALF 0.000000002216 0.75756 6.94444
258 1TAD GDP 0.000000002216 0.75756 6.94444
259 1FQJ GDP 0.000000001573 0.75018 6.94444
260 1FQK GDP 0.000000004327 0.72867 6.94444
261 1GOT GDP 0.000000008587 0.71095 6.94444
262 1G3Q ADP 0.00002144 0.52901 6.94444
263 4ZNL BEF ADP 0.00006725 0.50569 6.94444
264 2VF7 ADP 0.000213 0.48218 6.94444
265 1Q20 A3P 0.005199 0.44407 6.94444
266 1Q20 PLO 0.005199 0.44407 6.94444
267 1CJW COT 0.02603 0.40356 6.94444
268 1XEX ATP 0.0002157 0.50266 7.14286
269 3KTA AP5 0.0001407 0.49619 7.14286
270 1KK1 GNP 0.00000000005507 0.76551 7.40741
271 5CK5 GDP 0.0000000005841 0.7209 7.40741
272 2C9O ADP 0.00004356 0.52817 7.40741
273 5I0H ADP BEF 0.000093 0.51221 7.40741
274 1W7J ADP BEF 0.0001015 0.50553 7.40741
275 4MKG AP5 0.0006855 0.49646 7.40741
276 4QOS ADP 0.0001671 0.48996 7.40741
277 4PX9 ADP 0.00008914 0.48646 7.40741
278 4IOK ADP 0.001142 0.47021 7.40741
279 4IOK XPO 0.0009131 0.46992 7.40741
280 5MEX SZZ 0.005041 0.44943 7.40741
281 5MEX PAP 0.00207 0.4449 7.40741
282 4KBF AMP 0.002658 0.42216 7.40741
283 2QN6 GDP 0.000000000007993 0.80222 7.52688
284 1G6O ADP 0.00007011 0.5078 7.57576
285 2ODE ALF GDP 0.000000002978 0.75114 7.80142
286 5FG3 GDP 0.000000000001312 0.83617 7.87037
287 1YRB GDP 0.00000000001815 0.8241 7.87037
288 2XT3 ADP 0.0000008462 0.52751 7.87037
289 3QKT ANP 0.0001375 0.51036 7.87037
290 1NY5 ADP 0.000192 0.49227 7.87037
291 1RE0 GDP 0.00000000001523 0.79007 8.33333
292 2NCD ADP 0.000004317 0.58291 8.33333
293 2Q2Y ADP 0.0002367 0.52036 8.33333
294 2Q2Y MKR 0.0002453 0.5183 8.33333
295 4KVX ACO 0.01655 0.41079 8.33333
296 1LVG ADP 0.0000007588 0.56372 8.58586
297 5H56 TYD 0.00004918 0.54189 8.71795
298 5H56 ADP 0.00004918 0.54189 8.71795
299 1GOJ ADP 0.0000002506 0.6594 8.7963
300 3ZIA ADP 0.000009305 0.55233 8.7963
301 3ZIA ATP 0.00001009 0.54438 8.7963
302 1G41 ADP 0.00002312 0.53058 8.7963
303 1JJ7 ADP 0.0000004818 0.51379 8.7963
304 1YQT ADP 0.000006039 0.50872 8.7963
305 2ORV 4TA 0.00292 0.44673 8.7963
306 1GSA ADP 0.04022 0.41193 8.7963
307 2ZFZ ARG 0.04566 0.40744 8.86076
308 5N69 ADP 0.00008503 0.5066 9.04523
309 4R2I ANP 0.0004811 0.44952 9.04762
310 4Q1A 2XZ 0.0002915 0.57203 9.25926
311 4Q1A UDP 0.0002915 0.57203 9.25926
312 3BFV ADP 0.00001589 0.53176 9.25926
313 4FRZ ADP 0.000002637 0.52619 9.25926
314 3H4S ADP 0.000001017 0.5243 9.25926
315 4OI4 ATP 0.0001787 0.50276 9.25926
316 3F8K COA 0.01366 0.41201 9.375
317 3WXM GTP 0.0000000007266 0.77302 9.72222
318 1RJ9 GCP 0.000003196 0.62149 9.72222
319 2IYL GDP 0.0000004861 0.60235 9.72222
320 4FCW ADP 0.0001522 0.48904 9.72222
321 4AF0 IMP 0.01176 0.41365 9.72222
322 1W4R TTP 0.0006043 0.48398 9.74359
323 1S9D GDP 0.00000000008686 0.78222 9.85222
324 3PQC GDP 0.00000000495 0.70409 10.2564
325 1UJ2 ADP 0.00007479 0.52733 10.6481
326 1UJ2 C5P 0.0001041 0.5202 10.6481
327 1SVM ATP 0.0003658 0.51842 10.6481
328 3RLF ANP 0.0001507 0.50638 10.6481
329 2WJH GDP 0.0000000005506 0.74456 10.8434
330 2WJH FLC 0.0000001326 0.63657 10.8434
331 1G6H ADP 0.000000513 0.51287 10.8949
332 1WF3 GNP 0.0000000003961 0.78913 11.1111
333 5KSZ GCP 0.0000000359 0.6634 11.1111
334 1P9B GDP 0.0000489 0.52073 11.1111
335 1PVN MZP 0.02061 0.42071 11.1111
336 2WJG GDP 0.00000000009427 0.77537 11.1702
337 1F2U ATP 0.0003203 0.49598 11.4865
338 3FVQ ATP 0.0001425 0.50322 11.5741
339 4U00 ADP 0.00000171 0.49533 11.5741
340 2ZR9 DTP 0.00001168 0.53799 12.037
341 4LJ9 ACP 0.0004432 0.46439 12.037
342 5KSP GDP 0.00000000708 0.69248 12.6316
343 1FP6 ADP 0.000007058 0.55804 12.963
344 3KJI ADP 0.000009712 0.55145 12.963
345 1BG2 ADP 0.00000008567 0.54321 12.963
346 3IIJ ADP 0.000006191 0.55084 13.3333
347 5M04 GDP 0.00000000003602 0.77403 13.4259
348 2IXE ATP 0.0001057 0.51177 13.6531
349 1JWY GDP 0.00000001609 0.6838 13.8889
350 1JWY ADP 0.00008393 0.50118 13.8889
351 4WZA ACP 0.0000922 0.56088 14.3519
352 4WZA ADP 0.0000922 0.56088 14.3519
353 2Y65 ADP 0.0000003201 0.54368 14.3519
354 3B5J 12D 0.00002453 0.49926 14.8148
355 4WZ6 ATP 0.00001598 0.49291 14.8148
356 1ZUI SKM 0.0002813 0.51127 14.881
357 1NN5 ANP 0.00004434 0.54589 14.8837
358 1XMV ADP 0.00001137 0.54194 15.7407
359 4LPS GDP 0.000000009935 0.68557 16.2037
360 1K6M AGS 0.0000761 0.5209 16.6667
361 5BYK OAQ 0.0107 0.4336 16.6667
362 5BYK A3P 0.0107 0.4336 16.6667
363 3CX8 GSP 0.000000002717 0.75314 17.1296
364 3AB3 GDP 0.000000001383 0.74606 17.1296
365 1BH2 GSP 0.00000001004 0.72475 17.1296
366 2OM2 GDP 0.00000001234 0.70002 17.1296
367 2B8T THM 0.002974 0.44116 17.1296
368 1DAR GDP 0.0000000002517 0.75549 17.5926
369 4BQS K2Q 0.0002437 0.51446 18.1818
370 4BQS ADP 0.00003762 0.51432 18.1818
371 1UPT GTP 0.0000000002648 0.78452 18.7134
372 1R4A GNP 0.00000000003692 0.83351 18.7879
373 4B47 GDP 0.000000000001573 0.83335 19.0083
374 1KSH GDP 0.000000000007699 0.85527 19.8925
375 1ZJ6 G3D 0.0000000000417 0.79719 22.4599
376 4V0K GDP 0.0000000001931 0.79818 23.6686
377 1MR3 G3D 0.0000000001392 0.7726 23.7569
378 1M2O GNP 0.000000001228 0.76177 25.2632
379 1T5C ADP 0.0000006001 0.51342 25.9259
380 3QF7 ANP 0.0001175 0.50496 26
381 2KIN ADP 0.00000008052 0.54383 28
382 2QTV GNP 0.000000001721 0.75145 28.7425
383 2HF9 GSP 0.00000001378 0.60179 28.7611
384 1ZD9 GDP 0.00000000002262 0.82846 29.2553
385 2FH5 GTP 0.00000000001077 0.84822 29.9065
386 1MKY GDP 0.000000000001549 0.85854 32.8704
387 2ZEJ GDP 0.000000003425 0.74264 33.6957
388 4HI0 GDP 0.00000001659 0.6938 34.6734
389 1FZQ GDP 0.00000000002165 0.80515 35.3591
390 1F6B GDP 0.0000000003838 0.75192 37.8788
391 1J2J GTP 0.0000000001426 0.80121 39.759
392 1O3Y GTP 0.0000000002433 0.78985 39.759
393 3GJ5 GDP 0.00000000002839 0.80503 41.2037
394 3GJ4 GDP 0.00000000002469 0.80249 41.2037
395 3GJ7 GDP 0.00000000002906 0.79919 41.2037
396 3GJ8 GDP 0.00000000002435 0.77377 41.2037
397 5DIF GNP 0.00000000001198 0.86451 41.6667
398 5UWP GNP 0.00000000001399 0.86446 41.6667
399 5UWW GNP 0.00000000001216 0.8642 41.6667
400 5UWU GNP 0.00000000001312 0.86256 41.6667
401 4HAT GNP 0.0000000000175 0.85961 41.6667
402 5UWI GNP 0.00000000001532 0.85922 41.6667
403 5UWO GNP 0.00000000001572 0.85866 41.6667
404 5UWS GNP 0.00000000001956 0.85721 41.6667
405 5UWR GNP 0.00000000001773 0.85607 41.6667
406 5DHF GNP 0.00000000001812 0.8556 41.6667
407 5UWT GNP 0.00000000001886 0.85474 41.6667
408 5DI9 GNP 0.00000000002313 0.85358 41.6667
409 5UWH GNP 0.00000000002113 0.85229 41.6667
410 3M1I GTP 0.00000000002482 0.84883 41.6667
411 1IBR GNP 0.00000000002783 0.84636 41.6667
412 5BXQ GDP 0.00000000001195 0.82267 41.6667
413 3GJ0 GDP 0.00000000002056 0.8062 41.6667
414 3GJ3 GDP 0.00000000002972 0.79874 41.6667
415 3CH5 GDP 0.00000000004512 0.79558 41.6667
416 5UWQ GNP 0.00000000001234 0.59812 41.6667
417 5UWJ GNP 0.00000000001386 0.59703 41.6667
418 1OW3 GDP 0.00000000007696 0.79865 42.487
419 5TB5 GDP 0.000000000001112 0.87662 43.7838
420 5TAR GDP 0.000000000001565 0.87476 43.7838
421 2G77 GDP 0.0000000000006214 0.89889 43.9394
422 2GCO GNP 0.0000000001273 0.78819 44.2786
423 3REF GDP 0.0000000007716 0.76191 44.3299
424 4D0N GDP 0.00000000005439 0.78651 44.8649
425 1G4U GDP 0.0000000002105 0.78179 45.1087
426 1HE1 GDP 0.00000000007106 0.64762 46.0227
427 1HE1 AF3 0.01117 0.41259 46.0227
428 2FJU GSP 0.00000000004822 0.81668 46.0674
429 4DID GDP 0.00000000006694 0.78753 46.114
430 1NF3 GNP 0.0000000002097 0.79968 46.1538
431 1E96 GTP 0.00000000009889 0.81581 46.3542
432 2W2X GSP 0.000000000064 0.81072 46.4865
433 2NGR GDP 0.00000000001566 0.81716 46.5969
434 1GRN GDP 0.00000000006772 0.80131 46.5969
435 4ITR GDP 0.0000000002484 0.77833 46.5969
436 3BC1 GNP 0.000000000001095 0.91244 46.6667
437 1DS6 GDP 0.00000000001828 0.80857 46.875
438 1I4D GDP 0.00000000001892 0.78594 46.875
439 1CXZ GSP 0.0000000001002 0.80509 47.2527
440 5IRC GDP 0.000000002923 0.71491 47.8495
441 5XCO GDP 0.0000000000005089 0.89799 47.9532
442 5HPY GDP 0.00000000002742 0.82012 48.1081
443 2CJW GDP 0.0000000000004445 0.88381 48.4375
444 1TX4 ALF GDP 0.0000000002926 0.78593 48.5876
445 3T5G GDP 0.0000000000007724 0.8841 48.6188
446 4K81 GTP 0.00000000002317 0.85354 49.1228
447 5UFQ GNP 0.0000000000009956 0.91448 49.3976
448 5O2T GSP 0.000000000002487 0.8984 49.7041
449 1NVU GTP 0.00000000000731 0.87517 50
450 3DDC GNP 0.00000000001299 0.86278 50
Pocket No.: 2; Query (leader) PDB : 4DKX; Ligand: GDP; Similar sites found: 1
This union binding pocket(no: 2) in the query (biounit: 4dkx.bio1) has 17 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3IQE F42 0.01468 0.41599 3.24074
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