Receptor
PDB id Resolution Class Description Source Keywords
4DRJ 1.8 Å EC: 5.2.1.8 O-CRYSTAL STRUCTURE OF THE PPIASE DOMAIN OF FKBP52, RAPAMYCI FRB FRAGMENT OF MTOR HOMO SAPIENS FK-506 BINDING DOMAIN HSP90 COCHAPERONE IMMUNOPHILIN PEPTPROLYL ISOMERASE KINASE SIGNALLING MAMMALIAN TARGET OF RIMMUNOSUPPRESSION CANCER ISOMERASE-TRANSFERASE COMPLEX
Ref.: LARGE FK506-BINDING PROTEINS SHAPE THE PHARMACOLOGY RAPAMYCIN. MOL.CELL.BIOL. V. 33 1357 2013
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SO4 A:202;
 Invalid;
 none;
 submit data
96.063 O4 S [O-]S...
RAP A:201;
 Valid;
 none;
 submit data
914.172 C51 H79 N O13 C[C@@...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4DRJ 1.8 Å EC: 5.2.1.8 O-CRYSTAL STRUCTURE OF THE PPIASE DOMAIN OF FKBP52, RAPAMYCI FRB FRAGMENT OF MTOR HOMO SAPIENS FK-506 BINDING DOMAIN HSP90 COCHAPERONE IMMUNOPHILIN PEPTPROLYL ISOMERASE KINASE SIGNALLING MAMMALIAN TARGET OF RIMMUNOSUPPRESSION CANCER ISOMERASE-TRANSFERASE COMPLEX
Ref.: LARGE FK506-BINDING PROTEINS SHAPE THE PHARMACOLOGY RAPAMYCIN. MOL.CELL.BIOL. V. 33 1357 2013
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 30 families.
1 4DRJ - RAP C51 H79 N O13 C[C@@H]1CC....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 20 families.
1 4DRJ - RAP C51 H79 N O13 C[C@@H]1CC....
2 4DRH - RAP C51 H79 N O13 C[C@@H]1CC....
3 4DRI - RAP C51 H79 N O13 C[C@@H]1CC....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 13 families.
1 4DRJ - RAP C51 H79 N O13 C[C@@H]1CC....
2 4DRH - RAP C51 H79 N O13 C[C@@H]1CC....
3 4DRI - RAP C51 H79 N O13 C[C@@H]1CC....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: RAP; Similar ligands found: 3
No: Ligand ECFP6 Tc MDL keys Tc
1 RAP 1 1
2 RAD 0.912162 0.96875
3 ARD 0.81761 0.898551
Similar Ligands (3D)
Ligand no: 1; Ligand: RAP; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4DRJ; Ligand: RAP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4drj.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
APoc FAQ
Feedback