Receptor
PDB id Resolution Class Description Source Keywords
4EOY 2.22 Å NON-ENZYME: OTHER PLASMODIUM FALCIPARUM ATG8 IN COMPLEX WITH PLASMODIUM FALCIP PEPTIDE PLASMODIUM FALCIPARUM UBIQUITIN FOLD TRANSPORT PROTEIN
Ref.: STRUCTURAL CHARACTERIZATION AND INHIBITION OF THE P ATG8-ATG3 INTERACTION. J.STRUCT.BIOL. V. 180 551 2012
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CA A:203;
C:204;
A:201;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
submit data
40.078 Ca [Ca+2...
CL F:301;
C:201;
A:204;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
35.453 Cl [Cl-]
ACT B:201;
C:202;
B:202;
A:202;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
59.044 C2 H3 O2 CC(=O...
MG C:203;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
ASN ASP TRP LEU LEU PRO SER TYR F:103;
E:103;
D:103;
Valid;
Valid;
Valid;
none;
none;
none;
submit data
1006.1 n/a O=C([...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4EOY 2.22 Å NON-ENZYME: OTHER PLASMODIUM FALCIPARUM ATG8 IN COMPLEX WITH PLASMODIUM FALCIP PEPTIDE PLASMODIUM FALCIPARUM UBIQUITIN FOLD TRANSPORT PROTEIN
Ref.: STRUCTURAL CHARACTERIZATION AND INHIBITION OF THE P ATG8-ATG3 INTERACTION. J.STRUCT.BIOL. V. 180 551 2012
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1579 families.
1 4EOY - ASN ASP TRP LEU LEU PRO SER TYR n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1312 families.
1 4EOY - ASN ASP TRP LEU LEU PRO SER TYR n/a n/a
50% Homology Family (9)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1130 families.
1 5AZG Kd = 2.9 uM TYR GLN GLU SER THR ASP PHE THR PHE LEU n/a n/a
2 5AZF Kd = 36.1 uM TRP GLU GLU LEU n/a n/a
3 5E6O Kd = 76.9 uM TRP GLU GLU LEU n/a n/a
4 5GMV Kd = 1.78 uM ASP SEP TYR GLU VAL LEU ASP LEU n/a n/a
5 5L83 - ASP TRP GLU ILE VAL n/a n/a
6 5LXI - GLU ASP GLU ASP PHE GLU ILE LEU SEP LEU n/a n/a
7 6HOI - SER ALA ASN SER PHE THR LEU ILE GLY GLU n/a n/a
8 5LXH - GLU ASP GLU ASP PHE GLU ILE LEU SER LEU n/a n/a
9 4EOY - ASN ASP TRP LEU LEU PRO SER TYR n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ASN ASP TRP LEU LEU PRO SER TYR; Similar ligands found: 168
No: Ligand ECFP6 Tc MDL keys Tc
1 ASN ASP TRP LEU LEU PRO SER TYR 1 1
2 SER PRO LEU ASP SER LEU TRP TRP ILE 0.649007 0.929577
3 ASN ASP LYS TYR GLU PRO PHE TRP GLU 0.601156 0.914286
4 THR LEU PRO TRP ASP LEU TRP THR THR 0.597403 0.928571
5 ACE LEU TRP TRP PRO ASP 0.586207 0.830986
6 MET VAL TRP GLY PRO ASP PRO LEU TYR VAL 0.553073 0.891892
7 PRO GLN PRO VAL ASP SER TRP VAL 0.548781 0.914286
8 ARG TYR PRO LEU THR LEU GLY TRP CYS PHE 0.545455 0.883117
9 ARG TYR PRO LEU THR PHE GLY TRP 0.538889 0.881579
10 ALA ASN SER ARG TRP PRO THR THR ARG LEU 0.538012 0.881579
11 ABA SER LEU TRP ASN GLY PRO HIS LEU 0.532164 0.916667
12 PHE ALA PRO GLY ASN TYR PRO ALA TRP 0.531429 0.929577
13 LYS VAL PRO ARG ASN GLN ASP TRP LEU 0.519337 0.828947
14 GLY SER ASP PRO TRP LYS 0.519231 0.871429
15 ASN GLN DPR TRP GLN 0.51634 0.785714
16 PHE SER ASP PRO TRP GLY GLY 0.515337 0.885714
17 PRO ARG PRO ILE LEU LEU PRO TRP ARG NH2 0.514793 0.74026
18 TRP GLU TYR ILE PRO ASN VAL 0.51462 0.929577
19 GLU LEU ASP HOX TRP ALA SER 0.512658 0.75
20 SER VAL TYR ASP PHE PHE VAL TRP LEU 0.509434 0.814286
21 ALA LEU TRP GLY PHE PHE PRO VAL LEU 0.508772 0.857143
22 PHE PRO ARG PRO TRP LEU HIS GLY LEU 0.508197 0.815789
23 TYR TYR GLU SER ASP TRP LEU 0.506329 0.814286
24 MET SER LEU PRO GLY ARG TRP LYS PRO LYS 0.502645 0.8125
25 PHE LEU PRO SER ASP PHE PHE PRO SER VAL 0.5 0.914286
26 ARG PHE PRO LEU THR PHE GLY TRP 0.5 0.855263
27 ALA LEU TRP GLY PRO ASP PRO ALA ALA ALA 0.5 0.871429
28 ARG PHE PRO LEU THR PHE GLY TRP CYS PHE 0.497355 0.857143
29 ASP SER TRP LYS ASP GLY CYS TYR 0.497006 0.816901
30 GLU GLY PRO ARG ASN GLN ASP TRP LEU 0.494444 0.828947
31 TRP PRO TRP 0.489209 0.757143
32 SER TRP PHE PRO 0.483221 0.857143
33 ILE SER PRO ARG THR LEU ASP ALA TRP 0.481283 0.857143
34 ALA LEU TRP GLY PHE VAL PRO VAL LEU 0.48 0.857143
35 ARG TYR PRO LEU THR PHE GLY TRP CYS PHE 0.479592 0.87013
36 ILE ARG TYR PRO LYS THR PHE GLY TRP 0.479381 0.857143
37 HIS SER ILE THR TYR LEU LEU PRO VAL 0.477012 0.930556
38 GLU TYR GLY PRO LYS TRP ASN LYS 0.473988 0.885714
39 ALA VAL PRO TRP 0.472603 0.8
40 GLU LEU ASP HIS TRP ALA SER 0.472393 0.774648
41 GLN VAL PRO SER ASP PRO TYR ASN TYR 0.469512 0.928571
42 LEU LEU TRP ASN GLY PRO MET ALA VAL 0.469274 0.837838
43 GLU LEU ARG SER ARG TYR TRP ALA ILE 0.468927 0.792208
44 ARG LEU TRP SER 0.466667 0.684211
45 PHE GLN TRP MET GLY TYR GLU LEU TRP 0.465909 0.77027
46 GLU LEU ASP ORN TRP ALA SER 0.465839 0.785714
47 ASP ASN ARG LEU GLY LEU VAL TYR TRP PHE 0.465753 0.685714
48 GLU LEU ASP LYS TRP ALA SER 0.462963 0.8
49 GLU SER ASP PRO ILE VAL ALA GLN TYR 0.462428 0.901408
50 MET HIS PRO ALA GLN THR SER GLN TRP 0.462366 0.88
51 GLN MET PRO THR GLU ASP GLU TYR 0.461538 0.837838
52 ALA GLN TRP GLY PRO ASP PRO ALA ALA ALA 0.460674 0.842857
53 ASN GLN LEU ALA TRP PHE ASP THR ASP LEU 0.459302 0.757143
54 LEU GLU LEU ASP LYS TRP ALA SER LEU 0.458333 0.814286
55 GLU TYR LEU GLY LEU ASP VAL PRO VAL 0.458333 0.857143
56 LEU TYR ALA SER PRO GLN LEU GLU GLY PHE 0.458101 0.914286
57 ALA ASN SER ARG TRP PRO ALY SER ILE ILE 0.457895 0.822785
58 SER TRP PHE GLN THR ASP LEU 0.457831 0.8
59 THR PRO TYR ASP ILE ASN GLN MET LEU 0.457143 0.84
60 TYR MET PHE PRO ASN ALA PRO TYR LEU 0.456647 0.866667
61 GLY LEU MET TRP LEU SER TYR PHE VAL 0.455621 0.797297
62 ASP GLU ASP LYS TRP ASP ASP PHE 0.454545 0.714286
63 GLY SER HIS LEU GLU VAL GLN GLY TYR TRP 0.454054 0.873239
64 SER ASP ILE LEU PHE PRO ALA ASP SER 0.453988 0.84507
65 ARG LEU TYR HIS SEP LEU PRO ALA 0.453039 0.792683
66 ALA LEU ASP LYS TRP ALA SER 0.45283 0.8
67 ILE SER TYR GLY ASN ASP ALA LEU MET PRO 0.452514 0.866667
68 ALA LEU ASP LYS TRP ASP 0.45098 0.757143
69 ACE PRO TRP ALA THR CYS ASP SER NH2 0.450292 0.876712
70 ALA ASN SER ARG TRP PRO THR SER ALY ILE 0.450262 0.835443
71 PRO LYS LEU GLU PRO TRP LYS HIS PRO 0.449735 0.859155
72 ASN PHE ASP ASN PRO VAL TYR ARG LYS THR 0.449198 0.868421
73 SER PRO ILE VAL PRO SER PHE ASP MET 0.447674 0.826667
74 GLU GLU TYR LEU LYS ALA TRP THR PHE 0.447514 0.857143
75 LYS ARG LYS SER ARG TRP ASP GLU THR PRO 0.446927 0.818182
76 GLN LEU SER PRO PHE PRO PHE ASP LEU 0.446429 0.9
77 GLU ASN ASP LYS TRP ALA SER 0.445122 0.785714
78 ACE LEU TYR ALA SER SER ASN PRO ALA PTR 0.445087 0.858974
79 GLU ALA ASP PRO THR GLY HIS SER TYR 0.445055 0.929577
80 ARG PHE MET ASP TYR TRP GLU GLY LEU 0.443243 0.7125
81 DVA DPR GLY DSN DGN DHI DTY DAS DSN 0.443182 0.943662
82 SER SER VAL VAL GLY VAL TRP TYR LEU 0.443114 0.828571
83 ARG GLN TRP GLY PRO ASP PRO ALA ALA VAL 0.442708 0.789474
84 GLU LEU ASP LYS TRP ALA ASN 0.442424 0.785714
85 ALA ASN SER ARG TRP PRO THR SER FAK ILE 0.441026 0.814815
86 ACE ASN PRO ASP TRP ASP PHE ASN NH2 0.440252 0.771429
87 ARG MET PHE PRO ASN ALA PRO TYR LEU 0.440217 0.814815
88 GLU PRO GLN ALA PRO TRP MET GLU GLN 0.44 0.773333
89 GLU PRO GLN ALA PRO TRP MET GLU 0.44 0.773333
90 GLY TYR GLN ASP TYR GLU PRO GLU ALA 0.43949 0.8
91 MET LEU TRP GLY TYR LEU GLN TYR VAL 0.439306 0.756757
92 TYR PRO ASN VAL ASN ILE HIS ASN PHE 0.438202 0.916667
93 ARG GLN PHE GLY PRO ASP TRP ILE VAL ALA 0.437186 0.792208
94 GLU LEU ASP NRG TRP ALA SER 0.436782 0.678571
95 LYS PRO ILE VAL GLN TYR ASP ASN PHE 0.436464 0.929577
96 GLU ALA ASP LYS TRP GLN SER 0.436364 0.771429
97 SER SER VAL ILE GLY VAL TRP TYR LEU 0.436047 0.816901
98 MET TRP ARG PRO TRP 0.436047 0.6875
99 PHE TYR ALA PRO GLU PRO ILE THR SER LEU 0.435754 0.930556
100 ASP TYR GLU PRO ILE PRO GLU GLU ALA PHE 0.435028 0.873239
101 TYR PRO TYR ASP VAL PRO ASP TYR ALA 0.434783 0.885714
102 ALA ASN SER ARG TRP GLN ASP THR ARG LEU 0.432584 0.776316
103 ASP TRP ASN 0.431655 0.642857
104 GLU ASP ASN ASP TRP ASN 0.431655 0.642857
105 MET ASN TRP ASN ILE 0.431507 0.676056
106 PHE LEU TRP GLY PRO ARG ALA LEU VAL 0.430851 0.789474
107 ALA ASN SER ARG TRP PRO THR SER 2KK ILE 0.43 0.82716
108 PRO ALA TRP ASP GLU THR ASN LEU 0.428571 0.857143
109 GLY GLU GLU TRP GLY PRO TRP VAL NH2 0.427711 0.842857
110 ALA ASN SER ARG TYR PRO THR SER ILE ILE 0.426966 0.831169
111 PHE ALA PRO GLY ASN TYR PRO ALA LEU 0.426136 0.929577
112 GLU GLN ASP LYS TRP ALA SER 0.42515 0.771429
113 ALA ASN SER ARG TRP PRO THR SER 2KP ILE 0.423645 0.82716
114 ALA PRO GLN PRO ALA PRO GLU ASN ALA TYR 0.423529 0.859155
115 PRO GLN PHE SER LEU TRP LYS ARG 0.423529 0.828571
116 TYR TYR GLU SER GLY TRP LEU 0.422619 0.828571
117 GLN ASN TYR PRO ILE VAL GLN 0.421687 0.859155
118 VAL PRO LEU ARG PRO MET THR TYR 0.421348 0.7875
119 THR SER ASN LEU GLN GLU GLN ILE GLY TRP 0.421348 0.830986
120 ACE GLU LEU LEU MET VAL PRO ASP MET TYR 0.421053 0.783784
121 LEU LEU GLU LEU ASP LYS TRP ALA NH2 0.420732 0.742857
122 ARG ARG LEU PRO ILE PHE SER ARG LEU 0.420455 0.779221
123 MET LEU ILE TYR SER MET TRP GLY LYS 0.420213 0.826667
124 LEU LEU PHE GLY TYR PRO VAL TYR VAL 0.41954 0.871429
125 LEU LEU PHE GLY PHE PRO VAL TYR VAL 0.41954 0.871429
126 MDL 0.419355 0.675325
127 GLU LEU GLU LYS TRP ALA SER 0.418182 0.785714
128 GLU PRO VAL GLU THR THR ASP TYR 0.418182 0.857143
129 LEU PRO SER PHE GLU THR ALA LEU 0.417647 0.871429
130 DHI PRO PHE HIS LEU LEU VAL TYR 0.417582 0.873239
131 LYS PRO ILE VAL VAL LEU HIS GLY TYR 0.416216 0.875
132 VAL SER GLN ASN TYR PRO ILE VAL GLN ASN 0.415205 0.901408
133 TYR GLU TRP 0.414966 0.671429
134 ASN ARG PRO ILE LEU SER LEU 0.414634 0.766234
135 ARG LEU TYR GLN ASN PRO THR THR TYR ILE 0.413978 0.857143
136 TYR TYR SER ILE ILE PRO HIS SER ILE 0.413793 0.930556
137 LYS TYR TYR SER ILE ILE PRO HIS SER ILE 0.413793 0.930556
138 LYS GLN TRP ASP ASN TYR GLU PHE ILE TRP 0.413408 0.774648
139 TYR GLN PHE GLY PRO ASP PHE PRO ILE ALA 0.413043 0.887324
140 ARG ILE PRO SER TYR ARG TYR ARG TYR 0.411765 0.831169
141 SER ILE TYR PHE TPO PRO GLU LEU TYR ASP 0.410526 0.846154
142 SER LEU LEU MET TRP ILE THR GLN SER 0.410405 0.746667
143 LYS LEU TYR GLN ASN PRO THR THR TYR ILE 0.409836 0.929577
144 GLU LEU ASP LYS TRP ALA GLY 0.409639 0.732394
145 TYR LEU GLY GLY PRO ASP PHE PRO THR ILE 0.408602 0.929577
146 TRP ASN TRP PHE ASP ILE THR ASN LYS 0.408046 0.746479
147 LYS LEU PRO ALA GLN PHE TYR ILE LEU 0.407609 0.873239
148 LEU ASN PHE PRO ILE SER PRO 0.407407 0.887324
149 GLN ALA SER GLN ASP VAL LYS ASN TRP 0.40678 0.828571
150 PHE LEU PRO HIS ALY TYR ASP VAL LYS LEU 0.40625 0.849315
151 PRO SER TYR SEP PRO THR SEP PRO SER 0.405882 0.792208
152 ASP ASP TRP ASN TRP GLU VAL GLU ASP 0.405063 0.728571
153 ACE ASN TRP GLU THR PHE 0.404908 0.732394
154 ASN LEU VAL PRO SER VAL ALA THR VAL 0.404908 0.857143
155 ALA SER ASN GLU ASN TRP GLU THR MET 0.404762 0.756757
156 TYR TYR SER ILE ALA PRO HIS SER ILE 0.404494 0.90411
157 ARG THR PHE SER PRO THR TYR GLY LEU 0.404372 0.868421
158 8LR GLY TRP TYR XSN 0.403509 0.7375
159 LEU PRO PRO LEU ASP ILE THR PRO TYR 0.403409 0.873239
160 ASP ASP LEU TYR GLY 0.402778 0.685714
161 PRO GLY LEU TRP 0.402597 0.757143
162 PRO SER ARG TRP 0.402516 0.697368
163 VAL TYR PRO IAS HIS ALA 0.402367 0.887324
164 LEU LEU PHE GLY LYS PRO VAL TYR VAL 0.402235 0.847222
165 TYR TRP ALA ALA ALA ALA 0.401316 0.657143
166 LEU PRO PHE ASP LYS SER THR ILE MET 0.40107 0.826667
167 LYS GLN TRP ASP ASN TYR GLU PTR ILE TRP 0.401042 0.730769
168 ASP ILE ASN TYR TYR ALA SER GLU PRO 0.4 0.929577
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4EOY; Ligand: ASN ASP TRP LEU LEU PRO SER TYR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4eoy.bio3) has 16 residues
No: Leader PDB Ligand Sequence Similarity
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