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Receptor
PDB id Resolution Class Description Source Keywords
4GLL 2.5 Å EC: 4.1.1.35 CRYSTAL STRUCTURE OF HUMAN UDP-XYLOSE SYNTHASE. HOMO SAPIENS SHORT-CHAIN DEHYDROGENASE/REDUCTASE DECARBOXYLASE LYASE M
Ref.: HUMAN UDP-ALPHA-D-XYLOSE SYNTHASE AND ESCHERICHIA C CONSERVE A CONFORMATIONAL SHUNT THAT CONTROLS WHETH OR 4-KETO-XYLOSE IS PRODUCED. BIOCHEMISTRY V. 51 8844 2012
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GAI A:801;
B:502;
Invalid;
Invalid;
none;
none;
submit data
59.07 C H5 N3 C(=N)...
NAD A:800;
B:501;
Valid;
Valid;
none;
none;
submit data
663.425 C21 H27 N7 O14 P2 c1cc(...
SO4 A:802;
B:503;
Invalid;
Invalid;
none;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4GLL 2.5 Å EC: 4.1.1.35 CRYSTAL STRUCTURE OF HUMAN UDP-XYLOSE SYNTHASE. HOMO SAPIENS SHORT-CHAIN DEHYDROGENASE/REDUCTASE DECARBOXYLASE LYASE M
Ref.: HUMAN UDP-ALPHA-D-XYLOSE SYNTHASE AND ESCHERICHIA C CONSERVE A CONFORMATIONAL SHUNT THAT CONTROLS WHETH OR 4-KETO-XYLOSE IS PRODUCED. BIOCHEMISTRY V. 51 8844 2012
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 4GLL - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 4GLL - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 4GLL - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAD; Similar ligands found: 230
No: Ligand ECFP6 Tc MDL keys Tc
1 A3D 0.872727 0.986111
2 NHD 0.821429 0.972222
3 NAP 0.811966 0.986111
4 NFD 0.791304 0.946667
5 NXX 0.765766 0.972603
6 DND 0.765766 0.972603
7 AMP NAD 0.74359 0.972222
8 ZID 0.737705 0.986111
9 NAQ 0.729508 0.934211
10 NAE 0.721311 0.959459
11 NA0 0.712 0.972603
12 TAP 0.704 0.921053
13 NDE 0.689922 0.972603
14 NAJ 0.683333 0.972222
15 NDC 0.679389 0.934211
16 NDO 0.674603 0.958904
17 N01 0.656 0.972222
18 CNA 0.642276 0.972603
19 NBP 0.621212 0.922078
20 8ID 0.609756 0.922078
21 A2D 0.576923 0.958333
22 ADP 0.575472 0.931507
23 NGD 0.574803 0.922078
24 BA3 0.566038 0.958333
25 M33 0.564815 0.918919
26 ADP PO3 0.563636 0.957747
27 B4P 0.560748 0.958333
28 AP5 0.560748 0.958333
29 AN2 0.555556 0.918919
30 AT4 0.555556 0.894737
31 GAP 0.553571 0.932432
32 OOB 0.551724 0.972222
33 CA0 0.550459 0.932432
34 9JJ 0.546053 0.898734
35 HEJ 0.545455 0.931507
36 ACP 0.545455 0.906667
37 ATP 0.545455 0.931507
38 DQV 0.544 0.972222
39 ADP ALF 0.54386 0.883117
40 ALF ADP 0.54386 0.883117
41 DAL AMP 0.543103 0.945205
42 APR 0.540541 0.931507
43 AQP 0.540541 0.931507
44 AR6 0.540541 0.931507
45 5FA 0.540541 0.931507
46 ADP VO4 0.53913 0.945205
47 VO4 ADP 0.53913 0.945205
48 AD9 0.535714 0.906667
49 SAP 0.535714 0.883117
50 AGS 0.535714 0.883117
51 WAQ 0.533333 0.896104
52 ABM 0.53271 0.905405
53 DLL 0.529412 0.972222
54 00A 0.529412 0.921053
55 ACQ 0.526316 0.906667
56 NJP 0.526316 0.959459
57 ANP 0.526316 0.906667
58 OAD 0.525 0.932432
59 ADX 0.522523 0.839506
60 5AL 0.521739 0.945205
61 A1R 0.521008 0.871795
62 9SN 0.520325 0.909091
63 A 0.518868 0.930556
64 AMP 0.518868 0.930556
65 50T 0.517857 0.893333
66 ATF 0.517241 0.894737
67 1ZZ 0.516393 0.851852
68 3OD 0.516393 0.932432
69 SON 0.513514 0.92
70 PRX 0.513274 0.881579
71 6YZ 0.512821 0.906667
72 SRP 0.512821 0.92
73 9X8 0.512397 0.883117
74 ADP BMA 0.512397 0.932432
75 3UK 0.512397 0.958904
76 MYR AMP 0.512195 0.851852
77 NAJ PZO 0.510949 0.909091
78 NMN 0.509434 0.875
79 A3R 0.508333 0.871795
80 B5V 0.508197 0.945946
81 AMP DBH 0.507937 0.906667
82 A22 0.504202 0.945205
83 ATP A A A 0.504 0.971831
84 B5M 0.504 0.933333
85 FA5 0.504 0.945946
86 8QN 0.5 0.945205
87 NAX 0.496183 0.886076
88 TYR AMP 0.496063 0.933333
89 PR8 0.495935 0.8625
90 AMO 0.495868 0.92
91 ADQ 0.495868 0.932432
92 4AD 0.495868 0.933333
93 PAJ 0.495868 0.873418
94 A12 0.495495 0.894737
95 AP2 0.495495 0.894737
96 AHZ 0.492308 0.851852
97 YAP 0.492063 0.933333
98 FYA 0.491935 0.918919
99 AHX 0.491803 0.884615
100 4UU 0.488372 0.933333
101 5SV 0.487603 0.8375
102 TAT 0.487179 0.894737
103 T99 0.487179 0.894737
104 APC 0.486957 0.894737
105 SRA 0.486239 0.881579
106 6V0 0.484848 0.909091
107 NAI 0.484848 0.921053
108 GTA 0.484615 0.898734
109 A A 0.483871 0.958333
110 LAD 0.483871 0.873418
111 AU1 0.482456 0.906667
112 F2R 0.481752 0.831325
113 OMR 0.481203 0.841463
114 TXE 0.481203 0.921053
115 AF3 ADP 3PG 0.481203 0.873418
116 LAQ 0.480916 0.851852
117 G3A 0.48062 0.909091
118 B5Y 0.480315 0.933333
119 NB8 0.48 0.884615
120 TXA 0.48 0.92
121 BIS 0.48 0.871795
122 ME8 0.48 0.851852
123 PTJ 0.48 0.884615
124 139 0.477941 0.886076
125 LPA AMP 0.477273 0.851852
126 AFH 0.476923 0.873418
127 AR6 AR6 0.476923 0.958333
128 G5P 0.476923 0.909091
129 ARG AMP 0.476923 0.841463
130 25L 0.47619 0.945205
131 NAJ PYZ 0.475524 0.864198
132 25A 0.47541 0.958333
133 9ZA 0.47541 0.896104
134 9ZD 0.47541 0.896104
135 DZD 0.47482 0.897436
136 TXD 0.473684 0.921053
137 4UV 0.472868 0.933333
138 TYM 0.470149 0.945946
139 RBY 0.470085 0.894737
140 ADV 0.470085 0.894737
141 4TA 0.467626 0.864198
142 48N 0.466165 0.884615
143 XAH 0.465116 0.851852
144 4UW 0.462687 0.897436
145 M24 0.461538 0.886076
146 80F 0.460993 0.853659
147 IOT 0.459854 0.821429
148 T5A 0.456522 0.853659
149 EAD 0.455782 0.886076
150 MAP 0.455285 0.883117
151 GA7 0.454545 0.894737
152 BT5 0.453901 0.821429
153 A4P 0.452555 0.833333
154 UP5 0.451852 0.933333
155 PAP 0.445378 0.917808
156 4TC 0.445255 0.909091
157 AP0 0.445255 0.884615
158 YLP 0.444444 0.831325
159 P1H 0.443709 0.864198
160 AOC 0.442478 0.810811
161 Z5A 0.439189 0.833333
162 LMS 0.4375 0.817073
163 2A5 0.436975 0.857143
164 A G 0.43662 0.921053
165 G A A A 0.43662 0.909091
166 COD 0.43662 0.802326
167 ADJ 0.435714 0.841463
168 YLB 0.434783 0.831325
169 YLC 0.434783 0.851852
170 U A G G 0.433566 0.921053
171 ATR 0.433333 0.90411
172 7MD 0.432836 0.851852
173 8X1 0.432 0.764045
174 G5A 0.429752 0.790698
175 PO4 PO4 A A A A PO4 0.429688 0.943662
176 TAD 0.42963 0.873418
177 5AS 0.42735 0.770115
178 BTX 0.426573 0.831325
179 YLA 0.425532 0.831325
180 DSZ 0.425197 0.790698
181 NCN 0.424779 0.805556
182 UPA 0.42446 0.921053
183 8PZ 0.424242 0.811765
184 VMS 0.424 0.8
185 54H 0.424 0.8
186 9K8 0.423077 0.744444
187 N0B 0.422819 0.853659
188 6AD 0.422764 0.85
189 AYB 0.422535 0.821429
190 7D3 0.422414 0.844156
191 YLY 0.421769 0.821429
192 TSB 0.420635 0.809524
193 ODP 0.41958 0.922078
194 AV2 0.419355 0.855263
195 FB0 0.419355 0.775281
196 A5A 0.419355 0.819277
197 NNR 0.419048 0.739726
198 A A A 0.418605 0.918919
199 U A 0.417808 0.946667
200 649 0.417266 0.775281
201 NMN AMP PO4 0.416667 0.933333
202 SSA 0.416 0.790698
203 P5A 0.415385 0.755556
204 LSS 0.414062 0.772727
205 A2R 0.412698 0.918919
206 52H 0.412698 0.790698
207 JB6 0.412214 0.896104
208 5N5 0.411215 0.783784
209 YSA 0.410448 0.811765
210 53H 0.409449 0.790698
211 5CA 0.409449 0.790698
212 ITT 0.408333 0.878378
213 7D4 0.408333 0.844156
214 NA7 0.407692 0.894737
215 LEU LMS 0.407692 0.784091
216 5CD 0.407407 0.794521
217 0WD 0.406897 0.909091
218 A3P 0.40678 0.930556
219 HFD 0.406504 0.883117
220 AVV 0.40625 0.860759
221 RAB 0.40566 0.808219
222 XYA 0.40566 0.808219
223 ADN 0.40566 0.808219
224 FDA 0.405063 0.823529
225 GSU 0.40458 0.790698
226 7MC 0.404255 0.831325
227 NSS 0.403101 0.811765
228 6FA 0.402516 0.853659
229 PPS 0.4 0.817073
230 NVA LMS 0.4 0.784091
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4GLL; Ligand: NAD; Similar sites found with APoc: 905
This union binding pocket(no: 1) in the query (biounit: 4gll.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 5Z20 NAI 1.18694
2 5L53 NAP 1.23457
3 5G1N PAL 1.27389
4 3U4C NDP 1.42349
5 2HK9 ATR 1.45455
6 2HK9 NAP 1.45455
7 4LWP SAH 1.48368
8 5DF1 NAP 1.48368
9 5DF1 58X 1.48368
10 5J7X FAD 1.48368
11 1GQ2 NAP 1.48368
12 1IG3 VIB 1.52091
13 2AG5 NAD 1.62602
14 5WQP NAP 1.7094
15 5WQP NCA 1.7094
16 1WP4 NDP 1.7301
17 2CVZ NDP 1.7301
18 5WUW NAP 1.74216
19 1LUA NAP 1.74216
20 3GCZ SAM 1.77305
21 4M37 SAH 1.78042
22 5ZI2 NAD 1.78042
23 1UWK URO 1.78042
24 1UWK NAD 1.78042
25 5Z21 NAI 1.78042
26 4AP3 FAD 1.78042
27 4AP3 NAP 1.78042
28 5ZI2 ADP 1.78042
29 4M38 SAH 1.78042
30 2JJQ SAH 1.78042
31 1CF2 NAP 1.78042
32 1SQF SAM 1.78042
33 1ZGA SAH 1.78042
34 2DKH FAD 1.78042
35 2DKH 3HB 1.78042
36 5BVA FAD 1.78042
37 1TI7 NAP 1.78042
38 4KCT FDP 1.78042
39 3QXY SAM 1.78042
40 4XB2 NDP 1.79104
41 4NTC FAD 1.79104
42 4XB2 HSE 1.79104
43 1SOW NAD 1.82927
44 1I36 NAP 1.89394
45 4UP3 FAD 1.91083
46 1GV0 NAD 1.93548
47 3UOY NAP 2.07715
48 3UOY FAD 2.07715
49 3SSO SAH 2.07715
50 1RSG FAD 2.07715
51 4D04 NAP 2.07715
52 4D04 FAD 2.07715
53 1CT9 GLN 2.07715
54 5UR0 NAD 2.07715
55 2JB2 FAD 2.07715
56 2JB2 PHE 2.07715
57 5F8F SFG 2.07715
58 5WP4 SAH 2.07715
59 6AIN FAD 2.07715
60 3ITJ FAD 2.07715
61 3FGC FMN 2.07715
62 1U8X NAD 2.07715
63 4JBI NDP 2.07715
64 3HQP FDP 2.07715
65 3X0V FAD 2.07715
66 3BAZ NAP 2.1021
67 9LDT NAD 2.10843
68 9LDB NAD 2.10843
69 4ZVV NAD 2.10843
70 4ZVV GN0 2.10843
71 6BQ6 TER 2.1148
72 1LDM NAD 2.12766
73 2WK1 SAH 2.12766
74 1I9G SAM 2.14286
75 5U5N NAD 2.15054
76 2RH4 EMO 2.16606
77 3EVG SAH 2.18182
78 1LTH NAD 2.19436
79 3A27 SAM 2.20588
80 4ITU NAI 2.23048
81 4ITU 1HS 2.23048
82 2XKO AKG 2.25225
83 4OSP NAP 2.28137
84 4YAC NAI 2.3569
85 1PJS NAD 2.37389
86 4XQC 13D 2.37389
87 1BW9 NAD 2.37389
88 1C1X NAD 2.37389
89 1C0I BE2 2.37389
90 1C0I FAD 2.37389
91 3K7M FAD 2.37389
92 4L8V NAP 2.37389
93 1SC6 NAD 2.37389
94 4XQC NAD 2.37389
95 1WDI CIT 2.37389
96 3SQP FAD 2.37389
97 1HKU NAD 2.37389
98 1COY FAD 2.37389
99 2ZXI FAD 2.37389
100 1BXG NAD 2.37389
101 6F97 FAD 2.37389
102 4DPL NAP 2.37389
103 3O7W SAM 2.38095
104 4PLG OXM 2.39521
105 4PLG NAI 2.39521
106 4Z0H NAD 2.39521
107 5BSZ SAH 2.4
108 2EWM NAD 2.40964
109 5K0A FAD 2.42424
110 5XLX SAH 2.48227
111 2A92 NAI 2.49221
112 3LKZ SFG 2.49221
113 1EZ4 NAD 2.51572
114 1TDF FAD 2.53165
115 5KKA 6V0 2.5641
116 1EKX PAL 2.57235
117 5XWV NDP 2.62097
118 5XWV 8H6 2.62097
119 3LGS ADE 2.62172
120 5TQZ GLC 2.66667
121 2FR1 NDP 2.67062
122 4ZGS NAD 2.67062
123 2IZ1 ATR 2.67062
124 3WGT FAD 2.67062
125 1RM0 NAI 2.67062
126 1RM0 D6P 2.67062
127 3WGT QSC 2.67062
128 4DCM SAM 2.67062
129 3ZNN FAD 2.67062
130 3ZNN 4WL 2.67062
131 4CJN QNZ 2.67062
132 5WP5 SAH 2.67062
133 3G5S FAD 2.67062
134 2TOH HBI 2.67062
135 4JNA FAD 2.67062
136 1O0S NAI 2.67062
137 2Y6Q FAD 2.67062
138 2Y6Q I7T 2.67062
139 1GET NAP 2.67062
140 2QA1 FAD 2.67062
141 1GET FAD 2.67062
142 4USQ FAD 2.67062
143 5EPO NAP 2.67176
144 4GKV NAD 2.67857
145 1QG6 NAD 2.68199
146 1QG6 TCL 2.68199
147 1RYO OXL 2.75229
148 4ZA2 NAD 2.7668
149 3BMO NAP 2.77778
150 4CM4 NAP 2.77778
151 5JDI NAP 2.77778
152 4CM9 NAP 2.77778
153 3JQ8 NAP 2.77778
154 3JQG NAP 2.77778
155 3BMQ NAP 2.77778
156 3JQF NAP 2.77778
157 4CM8 NAP 2.77778
158 4CLR NAP 2.77778
159 4CLO NAP 2.77778
160 3JQ9 NAP 2.77778
161 3BMN NAP 2.77778
162 5JCJ NAP 2.77778
163 3JQB NAP 2.77778
164 4CMI NAP 2.77778
165 4CME NAP 2.77778
166 4RDH AMP 2.77778
167 4CME KTZ 2.77778
168 5JDI 6JO 2.77778
169 4RDI ATP 2.77778
170 5JCJ 6JM 2.77778
171 1T26 GBD 2.79503
172 1T26 NAI 2.79503
173 1ZQ9 SAM 2.80702
174 1YC5 NCA 2.84553
175 5E9W SAH 2.88462
176 4D79 ATP 2.89855
177 1HYH NAD 2.91262
178 4Y9D NAI 2.95082
179 3ABI NAD 2.96736
180 2CVQ NDP 2.96736
181 3OJO NAD 2.96736
182 5KMS NAD 2.96736
183 4J36 FAD 2.96736
184 4J36 1HR 2.96736
185 4DMG SAM 2.96736
186 1A99 PUT 2.96736
187 5NMX NAP 2.96736
188 3TTM PUT 2.96736
189 3L9W AMP 2.96736
190 2C7G FAD 2.96736
191 5NMX FAD 2.96736
192 4D7E FAD 2.96736
193 2NAD NAD 2.96736
194 1KYZ SAH 2.96736
195 3L9W GSH 2.96736
196 2C7G ODP 2.96736
197 2JHP SAH 2.96736
198 5KMS FAD 2.96736
199 2O4C NAD 2.96736
200 4RPL 3UC 2.96736
201 4RPL FAD 2.96736
202 3KLJ FAD 2.96736
203 4XYB NDP 2.96736
204 2F6D ACR 2.96736
205 2IVD FAD 2.96736
206 3AY6 NAI 2.97398
207 3AY6 BGC 2.97398
208 4ZCC FAD 2.97619
209 4ZCC NAI 2.97619
210 1W6U NAP 2.98013
211 1W73 NAP 2.98013
212 1W8D NAP 2.98013
213 2WD7 NAP 2.98507
214 2VZ0 NAP 2.98507
215 2VZ0 D64 2.98507
216 4K5S PM0 2.98507
217 4K5S FAD 2.98507
218 4MDH NAD 2.99401
219 6CEP NAD 2.99401
220 6CEP OXM 2.99401
221 5N6C NAD 3
222 5MDH NAD 3.003
223 5NM7 GLY 3.00752
224 1CER NAD 3.02115
225 3RKR NAP 3.05344
226 3OID NDP 3.10078
227 3JQA NAP 3.125
228 5K6A NAP 3.125
229 5JDC NAP 3.125
230 3JQ7 NAP 3.125
231 5J60 FAD 3.125
232 1GZ6 NAI 3.1348
233 4FN4 NAD 3.14961
234 3SJ7 NDP 3.1746
235 4HXY NDP 3.19635
236 4U60 SIA GAL NGA 3.21429
237 5A1T NAI 3.2641
238 2UYQ SAM 3.2641
239 5A1T OXM 3.2641
240 3AXB FAD 3.2641
241 3AXB PRO 3.2641
242 4ISS TAR 3.2641
243 1GPE FAD 3.2641
244 4YNU FAD 3.2641
245 3QVP FAD 3.2641
246 4IV9 FAD 3.2641
247 2VHW NAI 3.2641
248 5EOW FAD 3.2641
249 5JAQ NAI 3.2641
250 4YNU LGC 3.2641
251 3Q9T FAY 3.2641
252 5FJN BE2 3.2641
253 5TTJ FAD 3.26531
254 5XVH NAP 3.26797
255 2BD0 NAP 3.27869
256 1O6Z NAD 3.30033
257 6BII NAP 3.3033
258 2BKA NDP 3.30579
259 5JE8 NAD 3.31126
260 1CKN GTP 3.33333
261 1B8U NAD 3.34347
262 1B8U OAA 3.34347
263 1ZBQ NAD 3.36391
264 1M1B SPV 3.38983
265 6CI9 NAP 3.4749
266 3GU3 SAH 3.52113
267 1GUZ NAD 3.54839
268 1V59 NAD 3.55649
269 1V59 FAD 3.55649
270 1Z6Z NAP 3.56083
271 4J7U YTZ 3.56083
272 4J7U NAP 3.56083
273 1X87 NAD 3.56083
274 5OC1 FAD 3.56083
275 3A06 NDP 3.56083
276 4R5M NAP 3.56083
277 1EBF NAD 3.56083
278 5N0J FAD 3.56083
279 4KBA 1QM 3.56083
280 1H9A NAP 3.56083
281 3CGD FAD 3.56083
282 3CGD COA 3.56083
283 2GVC FAD 3.56083
284 3CGD NAD 3.56083
285 4R5M 4NO 3.56083
286 5XNC MTA 3.56083
287 1VQW FAD 3.56083
288 3CGB FAD 3.56083
289 4B63 ORN 3.56083
290 4B63 FAD 3.56083
291 4B63 NAP 3.56083
292 3S5W FAD 3.56083
293 5BUK FAD 3.56083
294 5A04 BGC 3.56083
295 1QO8 FAD 3.56083
296 2GV8 FAD 3.56083
297 1ZK7 FAD 3.56083
298 5A04 NDP 3.56083
299 2R4J 13P 3.56083
300 2R4J FAD 3.56083
301 3A06 FOM 3.56083
302 6H3O FAD 3.56083
303 4K7O EKZ 3.57143
304 5BSH PRO 3.61011
305 1PZG A3D 3.62538
306 2PD4 DCN 3.63636
307 2PD4 NAD 3.63636
308 2VDV SAM 3.65854
309 1C3V NDP 3.67347
310 6F9Q NAD 3.67647
311 3FPZ AHZ 3.68098
312 2Q7V FAD 3.69231
313 1WS5 MMA 3.7594
314 1M26 GAL A2G 3.7594
315 1WS4 GYP 3.7594
316 1UGY GLA GLC 3.7594
317 1JAC AMG 3.7594
318 1KUJ MMA 3.7594
319 1UGW GAL 3.7594
320 3O03 NAP 3.78007
321 5OCM NAP 3.78007
322 3AI3 SOL 3.80228
323 1E3W NAD 3.83142
324 1U7T NAD 3.83142
325 1U7T TDT 3.83142
326 2WYV NAD 3.83142
327 1E6W NAD 3.84615
328 4XFR CIT 3.85757
329 5CAE COA 3.85757
330 2AQJ FAD 3.85757
331 2AQJ TRP 3.85757
332 5UAO FAD 3.85757
333 5HSA FAS 3.85757
334 6ER9 FAD 3.85757
335 1MUU NAD 3.85757
336 1MV8 NAD 3.85757
337 6ER9 NAP 3.85757
338 2XVE FAD 3.85757
339 2XVF FAD 3.85757
340 5G3U ITW 3.85757
341 3UCL NAP 3.85757
342 3UCL CYH 3.85757
343 3UCL FAD 3.85757
344 5G3U FDA 3.85757
345 1BZL FAD 3.85757
346 1BZL GCG 3.85757
347 5U8U FAD 3.85757
348 6GAR FAD 3.85757
349 2BWN SIN 3.85757
350 4DSG FAD 3.85757
351 5AOV NAP 3.86905
352 4B7X NAP 3.86905
353 1RP0 AHZ 3.87324
354 1UXG FUM 3.8835
355 1UXG NAD 3.8835
356 4E13 NAD 3.88693
357 1EJ0 SAM 3.88889
358 4KOA NDP 3.9039
359 1NNU NAD 3.93013
360 1NNU TCT 3.93013
361 4E5N NAD 3.93939
362 1GAD NAD 3.93939
363 6AA8 NAD 3.97351
364 2GCO GNP 3.9801
365 2CFC NAD 4
366 1AG9 FMN 4
367 5OJL TXP 4.02685
368 5EES NAP 4.04858
369 1F3L SAH 4.04984
370 1H5R THM 4.09556
371 1H5S TMP 4.09556
372 4XSH GSP 4.10959
373 1SNY NAP 4.11985
374 3WV8 ATP 4.12844
375 3JWH SAH 4.14747
376 3ICT ADP 4.1543
377 3ICS ADP 4.1543
378 1E5Q NDP 4.1543
379 1H82 GZZ 4.1543
380 1H82 FAD 4.1543
381 3VSE SAH 4.1543
382 5J5Z FAD 4.1543
383 5DNK SAH 4.1543
384 4MO2 FAD 4.1543
385 4MO2 FDA 4.1543
386 1RM4 NDP 4.1543
387 1XVB BHL BHL 4.1543
388 1NAA ABL 4.1543
389 1NAA 6FA 4.1543
390 1JG9 GLC 4.1543
391 4EIP FAD 4.1543
392 4N49 SAM 4.1543
393 3ICT FAD 4.1543
394 2HQM FAD 4.1543
395 3H4V DVP 4.16667
396 3H4V NAP 4.16667
397 3KB6 NAD 4.19162
398 5NUF NAD 4.21687
399 5NUE NAD 4.21687
400 2HXW FLC 4.21941
401 3HB5 NAP 4.28135
402 3WXB NDP 4.30108
403 2CUL FAD 4.31034
404 4K26 NDP 4.34783
405 1MXH DHF 4.34783
406 1MXH NAP 4.34783
407 4K26 SFF 4.34783
408 1WMA AB3 4.34783
409 1WMA NDP 4.34783
410 2WA2 SAM 4.34783
411 1OMO NAD 4.34783
412 3C1O NAP 4.36137
413 1JA9 NDP 4.37956
414 1A5Z NAD 4.38871
415 5A96 GTP 4.41767
416 1SAY PYR 4.43213
417 4PIV NDP 4.45104
418 1LVL NAD 4.45104
419 3QJ4 FAD 4.45104
420 5L2R MLA 4.45104
421 1REO FAD 4.45104
422 5EB4 FAD 4.45104
423 5Y77 FAD 4.45104
424 2WPF FAD 4.45104
425 2WPF WPF 4.45104
426 5DX8 SFG 4.45104
427 5ERG SAM 4.45104
428 3B20 NAD 4.45104
429 3QH2 3NM 4.45104
430 5DX1 SFG 4.45104
431 5DX0 SFG 4.45104
432 4BV6 FAD 4.45104
433 5DXA SFG 4.45104
434 5DWQ SFG 4.45104
435 1FWV SGA MAG FUC 4.47761
436 1V6A TRE 4.51807
437 1HDG NAD 4.51807
438 1V35 NAI 4.55927
439 4FZV SAM 4.60251
440 5OJI NAP 4.61538
441 5OJI ISN 4.61538
442 2P3V SRT 4.6875
443 4EBZ NAG NAG NAG NAG 4.71698
444 1J5P NAD 4.74308
445 5ZEC NAP 4.74777
446 4C4A SAH 4.74777
447 4FWE FAD 4.74777
448 3I6I NDP 4.74777
449 3AB1 FAD 4.74777
450 1KJ8 GAR 4.74777
451 4EMI FAD 4.74777
452 5KOX RFP 4.74777
453 5KOX FAD 4.74777
454 2BRY FAD 4.74777
455 3DMH SAM 4.74777
456 4EMI NAD 4.74777
457 3PT9 SAH 4.74777
458 1RYI GOA 4.74777
459 1RYI FAD 4.74777
460 4O1M NAD 4.7619
461 3ORF NAD 4.78088
462 2DBZ NAP 4.79042
463 3B1F NAD 4.82759
464 4GUS FAD 4.83871
465 4HSU FAD 4.83871
466 4GUT FAD 4.83871
467 1A27 NAP 4.84429
468 2EXX NAP 4.90196
469 2DTX BMA 4.92424
470 1RYH GNP 4.92611
471 5L4L NAP 4.93421
472 5L4L 7OX 4.93421
473 4MIG G3F 4.93827
474 5GT9 NAP 4.94297
475 1G0N PHH 4.947
476 1G0N NDP 4.947
477 6EV2 BGC 4.95496
478 1XG5 NAP 5.01792
479 4Q9N NAI 5.03356
480 3V1U NAD 5.04451
481 2V6G NAP 5.04451
482 1PL6 NAD 5.04451
483 2VVM FAD 5.04451
484 2VVL FAD 5.04451
485 2IID FAD 5.04451
486 2IID PHE 5.04451
487 4Z24 FAD 5.04451
488 5NA1 FAD 5.04451
489 4CNK FAD 5.04451
490 1XHC FAD 5.04451
491 4YKG NAD 5.04451
492 2E5V FAD 5.04451
493 5X80 SAL 5.04451
494 3E1T FAD 5.04451
495 4YKG FAD 5.04451
496 5O98 NAP 5.04732
497 4FC7 COA 5.05415
498 4FC7 NAP 5.05415
499 2B4Q NAP 5.07246
500 2DC1 NAD 5.08475
501 3ICC NAP 5.09804
502 4DVR 0LY 5.11182
503 1AE1 NAP 5.12821
504 1QK3 5GP 5.15021
505 4OM8 NAD 5.17799
506 5F5N NAD 5.19031
507 2DT5 NAD 5.21327
508 3MBI HSX 5.22648
509 4ZU3 4SD 5.28634
510 1PR9 NAP 5.32787
511 3D3W NAP 5.32787
512 1DJN ADP 5.34125
513 3X0D SAH 5.34125
514 1GTE FAD 5.34125
515 2YVJ NAI 5.34125
516 5ZYN FAD 5.34125
517 5TS5 FAD 5.34125
518 5L4S NAP 5.34591
519 5L4S 6KX 5.34591
520 1LDN NAD 5.37975
521 2ZAT NAP 5.38462
522 2AE2 NAP 5.38462
523 2AE2 PTO 5.38462
524 4RSL FAD 5.39326
525 5U5G NAP 5.42373
526 5Y8L HUI 5.42373
527 5Y8L NAD 5.42373
528 4YRY NAD 5.43478
529 4YRY FAD 5.43478
530 3VZS NAP 5.44747
531 3VZS CAA 5.44747
532 4O0L NDP 5.45455
533 4MJ0 SIA SIA 5.45455
534 2CDN ADP 5.47264
535 5O42 NAD 5.47445
536 5O42 BGC 5.47445
537 5O42 9JW 5.47445
538 4D3F NAP 5.48387
539 5THQ NDP 5.51471
540 3ENV ABF 5.53191
541 4NBU NAI 5.6
542 4J1Q NDP 5.63798
543 1Y1P NMN AMP PO4 5.63798
544 1XSE NDP 5.63798
545 2GZ3 NAP 5.63798
546 3AYI HCI 5.63798
547 3AYI FAD 5.63798
548 4HA6 FAD 5.63798
549 3OIG NAD 5.6391
550 2QZZ EMF 5.66038
551 2QZZ NAP 5.66038
552 2JAP NDP 5.66802
553 2JAH NDP 5.66802
554 1VM6 NAD 5.70175
555 1ZEM NAD 5.72519
556 4CQM NAP 5.7377
557 6GAS FAD 5.74018
558 2BGM NAJ 5.7554
559 1LVW TYD 5.76271
560 1OAA OAA 5.79151
561 4JK3 NAD 5.79151
562 6FP4 E1T 5.85284
563 2WSB NAD 5.90551
564 1WDK NAD 5.93472
565 6C4T NA7 5.93472
566 5JCM NAD 5.93472
567 5JCM ISD 5.93472
568 5JCM FAD 5.93472
569 4USR FAD 5.93472
570 5G4L NDP 5.94406
571 1VL8 NAP 5.99251
572 5OVL NAP 6
573 1JNR FAD 6
574 4POO SAM 6
575 3LZW NAP 6.0241
576 3LZW FAD 6.0241
577 5N2I NAP 6.03448
578 2GAG NAD 6.06061
579 2GAG FAD 6.06061
580 2GAG FOA 6.06061
581 1XKQ NDP 6.07143
582 1DQN IMU 6.08696
583 3O9Z AKG 6.08974
584 3O9Z NAD 6.08974
585 5X20 NAD 6.08974
586 2Q0L FAD 6.10932
587 1HDR NAD 6.14754
588 3A4T SFG 6.20438
589 1FK8 NAD 6.22568
590 3H8V ATP 6.23145
591 4OOE FOM 6.23145
592 4OOE NDP 6.23145
593 2RAB NAD 6.23145
594 5MBX SP5 6.23145
595 5MBX FAD 6.23145
596 3GF4 UPG 6.23145
597 3GF4 FAD 6.23145
598 2YG3 FAD 6.23145
599 3NJ4 AFX 6.23145
600 3H5N ATP 6.23229
601 2NU8 COA 6.25
602 2DKN NAI 6.27451
603 1HYE NAP 6.38978
604 3ZV6 NAD 6.40569
605 3ZV6 4HB 6.40569
606 4FBL SPD 6.40569
607 5MIT NAP 6.42202
608 5MIT FAD 6.42202
609 2F1K NAP 6.45161
610 5MZI FYK 6.50759
611 5MZI FAD 6.50759
612 3GDN FAD 6.52819
613 3GDN HBX 6.52819
614 4X9M FAD 6.52819
615 1FEC FAD 6.52819
616 4OPC PGT 6.52819
617 4OPC FDA 6.52819
618 5X68 FAD 6.52819
619 1I8T FAD 6.52819
620 4TR9 38D 6.52819
621 6A3J NAI 6.52819
622 3A2Q ACA ACA 6.52819
623 5JWC FAD 6.52819
624 5FEU NAP 6.52921
625 5Z2L NDP 6.53061
626 5CG1 NAD BBN 6.55738
627 1NW5 SAM 6.58307
628 3OA2 NAD 6.60377
629 1J49 NAD 6.60661
630 1GEG NAD 6.64062
631 3G2O SAM 6.68896
632 5JCA NDP 6.69014
633 5JCA FAD 6.69014
634 1HDC CBO 6.69291
635 1D7O TCL 6.73401
636 1D7O NAD 6.73401
637 1IY8 NAD 6.74157
638 2G5C NAD 6.76157
639 3HAD NAD 6.81818
640 4MOP 2H5 6.82493
641 1PS9 FAD 6.82493
642 5VN0 FAD 6.82493
643 5HV7 RBL 6.82493
644 5VN0 NAI 6.82493
645 4U8P FDA 6.82493
646 4U8P UDP 6.82493
647 1GEE NAD 6.89655
648 1NFQ NAI 6.92308
649 1KYQ NAD 6.93431
650 2VT3 ATP 6.97674
651 3CH6 311 6.99301
652 3CH6 NAP 6.99301
653 3GGO NAI 7.00637
654 3GGO ENO 7.00637
655 5OVK NDP 7.03125
656 4EUE NAI 7.12166
657 4PLT NAI 7.12166
658 4PLT OXM 7.12166
659 6C4N NAP 7.12166
660 6GKV SAH 7.12166
661 5FFF NAP 7.393
662 5FFF 5XC 7.393
663 3OJF NDP 7.393
664 3OJF IMJ 7.393
665 3OFK SAH 7.40741
666 2Z3Y F2N 7.4184
667 4M52 FAD 7.4184
668 1VKO NAD 7.4184
669 2GSD NAD 7.4184
670 4BVA NDP 7.4184
671 3CTY FAD 7.52351
672 2XVM SAH 7.53769
673 1JAY NAP 7.54717
674 4KWI NAP 7.60456
675 4KWI 1TJ 7.60456
676 3BF1 PAU 7.63052
677 4URF NAD 7.66129
678 3AB4 LYS 7.71513
679 6C4M NAP 7.71513
680 3AB4 THR 7.71513
681 1X14 NAD 7.71513
682 4REP FAD 7.71513
683 5DN9 NAD 7.71513
684 5MQ6 NDP 7.71513
685 5T9E NAP 7.74908
686 5T9F TYR 7.74908
687 5T9F NAP 7.74908
688 3A28 NAD 7.75194
689 1O8B ABF 7.76256
690 5OOH NAP 7.76699
691 5OOH 9ZZ 7.76699
692 1O94 ADP 7.8125
693 5LNW HG3 7.91139
694 4OHU 2TK 7.95848
695 4OHU NAD 7.95848
696 1N5D NDP 7.98611
697 4CP8 MLI 8.00821
698 5GWT NAD 8.01187
699 5GWT SIN 8.01187
700 3TN7 NJP 8.01187
701 1XHL NDP 8.01187
702 3V1Y NAD 8.01187
703 4NTD FAD 8.01187
704 2I3G NAP 8.01187
705 4PPF FLC 8.01187
706 4J56 FAD 8.01187
707 1VJT NAD 8.01187
708 4RF2 NAP 8.08823
709 5BW4 SAM 8.2397
710 1JOT GAL A2G 8.27068
711 1BDB NAD 8.30325
712 2CDU ADP 8.30861
713 2CDU FAD 8.30861
714 3QFA FAD 8.30861
715 2HMT NAI 8.33333
716 5I7S NAD 8.33333
717 5I7S E9P 8.33333
718 5C2N NAG 8.33333
719 1DRV A3D 8.42491
720 1O5I NAD 8.43373
721 5B4T NAD 8.46154
722 5B4T 3HR 8.46154
723 3AFN NAP 8.52713
724 1PZM 5GP 8.53081
725 3QV1 NAD 8.53659
726 4II2 ATP 8.58896
727 1YY5 FAD 8.60534
728 4TVD BGC 8.60534
729 3O26 NDP 8.68167
730 4NBT NAD 8.75
731 1ZK4 AC0 8.76494
732 1ZK4 NAP 8.76494
733 3NBC LAT 8.78378
734 5E8J SAH 9.09091
735 2OOR NAD 9.19881
736 1F8G NAD 9.19881
737 1YS4 NAP 9.19881
738 5X9D 80F 9.21053
739 5YEC ATP 9.2437
740 2GDZ NAD 9.3633
741 5TWB FAD 9.49555
742 5GSN NAP 9.49555
743 5GSN FAD 9.49555
744 5GSN MMZ 9.49555
745 5H81 NAP 9.51157
746 1FNZ A2G 9.70464
747 3CIF NAD 9.79228
748 1YQZ FAD 9.79228
749 5H4S RAM 9.85915
750 4YSX FAD 9.92908
751 4YSX MLI 9.92908
752 3K5I AIR 10.089
753 2DFV NAD 10.089
754 2JL1 NAP 10.1045
755 1UJ5 5RP 10.1322
756 2JK0 ASP 10.1538
757 2VYN NAD 10.1796
758 1J0X NAD 10.241
759 2HJR APR 10.3659
760 3GFB NAD 10.3858
761 2HIM ASP 10.3858
762 1P31 EPU 10.3858
763 3NUG NAD 10.5263
764 4D42 W0I 10.6383
765 4D42 NAP 10.6383
766 5EJ2 NAD 10.7143
767 1LSS NAD 10.7143
768 2GL0 ADN 10.7784
769 1DSS NAD 10.8108
770 2F5Z FAD 10.9375
771 1E1M NAP 10.9792
772 1E1M FAD 10.9792
773 1E6E FAD 10.9792
774 5LD5 NAD 10.9792
775 1Q7B NAP 11.0656
776 4YAG NAI 11.0727
777 1UP7 NAD 11.276
778 4NBW NAD 11.284
779 4QED NAP 11.2903
780 1H5Q NAP 11.3208
781 3GEG NAD 11.336
782 1L7N ALF 11.3744
783 3CMC NAD 11.3772
784 1P77 ATR 11.3971
785 1NYT NAP 11.4391
786 2VUT NAD 11.6279
787 2BOS GLA GAL GLC 11.7647
788 2BOS GLA GAL 11.7647
789 3QWI NAP 11.8519
790 3QWI CUE 11.8519
791 1MO9 FAD 11.8694
792 1MO9 KPC 11.8694
793 4NEC SAH 12.1212
794 3T31 FAD 12.1662
795 3T31 DCQ 12.1662
796 1EDO NAP 12.2951
797 3DXY SAM 12.3853
798 5MLR NAP 12.4629
799 5MLR GRQ 12.4629
800 3SJU NDP 12.5448
801 1UZN NAP 12.5506
802 3EGI ADP 12.6214
803 5AYV NAP 12.6214
804 1X1T NAD 12.6923
805 5U32 GDP 12.7119
806 1C3M MAN MAN 12.9252
807 6EL3 NAP 13.0564
808 4NZ6 DLY 13.099
809 4NZ6 DGL 13.099
810 2Q2V NAD 13.3333
811 2OKL BB2 13.5135
812 1YXM ADE 13.5314
813 3RJ5 NAD 13.7795
814 3AD8 PYC 13.7931
815 3AD8 FAD 13.7931
816 3AD8 NAD 13.7931
817 5YSS NAD 14.0625
818 2WET FAD 14.2433
819 1GZ4 ATP 14.2433
820 5T2U NAP 14.9194
821 4M1U A2G MBG 15.7143
822 3B1J NAD 16
823 4U7W NDP 16.0237
824 5L95 AMP 16.25
825 5MSO NAP 16.3205
826 1U1I NAD 16.3205
827 4JEJ 1GP 16.3934
828 2GN4 UD1 16.6172
829 2GN4 NDP 16.6172
830 1GR0 NAD 16.6172
831 3VPH NAD 16.7742
832 3VPH OXM 16.7742
833 4YEE 4CQ 17.7778
834 1Y8Q ATP 18.1009
835 5FA5 MTA 18.3976
836 4GQB 0XU 18.3976
837 1UAY ADN 18.595
838 3KIH GDL 21.6495
839 1VL0 NAI 21.9178
840 4TQG NDP 21.9814
841 5BJX NAD 23.1454
842 5BJX UDP 23.1454
843 5Y1G NAD 24.0854
844 5Y1G AKB 24.0854
845 3MQ2 SAH 24.3119
846 2PV7 NAD 25.1678
847 4PVD NDP 25.5193
848 2ZX2 RAM 26.1538
849 3RFV NAI 26.2172
850 3RFV 15L 26.2172
851 2Q46 NAP 26.4822
852 3WMX NAD 26.7062
853 5K4W NAI 28.6604
854 5K4W THR 28.6604
855 4R1S NAP 28.7834
856 2YY7 NAD 30.4487
857 3A4V PYR 30.5994
858 3A4V NAD 30.5994
859 2X6T NAP 31.454
860 1EQ2 NAP 32.9032
861 2C29 NAP 32.9377
862 2C29 DQH 32.9377
863 5ZZ6 ADP 33.1731
864 5ZZ6 NAD 33.1731
865 4G5H NAP 35.3116
866 4G5H UD7 35.3116
867 5Z75 NAD 37.3089
868 1N7G NDP 38.5757
869 1N7G GDR 38.5757
870 1RPN NDP 39.1045
871 1RKX NAD 39.4659
872 1I2B UPG 40.0593
873 1I2B NAD 40.0593
874 1I2B USQ 40.0593
875 2PZM UDP 40.303
876 2PZM NAD 40.303
877 1Z45 NAD 40.3561
878 5IN4 GDP 40.3561
879 5IN4 6CK 40.3561
880 5IN4 NAP 40.3561
881 1E7S NAP 41.1215
882 2Q1W NAD 41.1411
883 1UDB UFG 41.543
884 1UDB NAD 41.543
885 1SB8 NAD 41.8398
886 1SB8 UD2 41.8398
887 1EK6 NAI 41.8398
888 1EK6 UPG 41.8398
889 1GY8 NAD 42.4332
890 1BXK NAD 43.0267
891 1ORR NAD 43.0267
892 1WVG APR 43.3234
893 1OC2 TDX 43.6202
894 1OC2 NAD 43.6202
895 1KEW TYD 44.2136
896 1KEW NAD 44.2136
897 1R6D NAD 44.2136
898 1R6D DAU 44.2136
899 2PK3 A2R 44.5483
900 3LU1 NAD 44.8071
901 2C5A NAD 45.1039
902 2C5A GDC 45.1039
903 2Q1S NAI 45.6973
904 6DNT NAD 46.2908
905 6BWL NAD 48.7805
Pocket No.: 2; Query (leader) PDB : 4GLL; Ligand: NAD; Similar sites found with APoc: 150
This union binding pocket(no: 2) in the query (biounit: 4gll.bio1) has 32 residues
No: Leader PDB Ligand Sequence Similarity
1 3GXO SAH 1.48368
2 6CAM BGC 1.48368
3 3GWZ SAH 1.48368
4 2RGJ FAD 1.48368
5 5E72 SAM 1.48368
6 2VAR KDG 1.59744
7 5FUB SAH 1.78042
8 1G55 SAH 1.78042
9 3LST SAH 1.78042
10 2P41 SAH 1.96721
11 1P1C SAH 2.01005
12 3P3Z P3Z 2.07715
13 3X01 AMP 2.07715
14 1V8K ANP 2.07715
15 3TY3 GGG 2.07715
16 3EC1 GDP 2.07715
17 1LLU NAD 2.07715
18 3ITJ CIT 2.07715
19 4KIB SAH 2.07715
20 5LQ8 GB 2.12766
21 5GVR LMR 2.13675
22 5W7K SAH 2.24359
23 4YUW 4JU 2.30263
24 4KRG SAH 2.37389
25 1COY AND 2.37389
26 3NYC IAR 2.37389
27 3NYC FAD 2.37389
28 3LCC SAH 2.55319
29 4X1B MLI 2.67062
30 5WGR FAD 2.67062
31 3G5S GSH 2.67062
32 2EG5 SAH 2.67062
33 3CF6 SP1 2.67062
34 6FDF SAH 2.69461
35 3FSY SCA 2.71084
36 4YCA NDP 2.72109
37 5JGL SAM 2.76817
38 2PXX SAH 2.7907
39 6HKE MLT 2.83019
40 5MGZ SAH 2.9661
41 3ULK NDP 2.96736
42 1RJD SAM 2.96736
43 3B6C SDN 2.99145
44 4K6B GLU 3.10559
45 2NGR AF3 3.14136
46 1JPA ANP 3.20513
47 4DKX GDP 3.24074
48 5W7M SAH 3.2641
49 5FJN FAD 3.2641
50 2CUN 3PG 3.2641
51 4P86 5GP 3.27869
52 5ULP KB1 3.35821
53 2BQP GLC 3.4188
54 5THY SAH 3.56083
55 5ZBC FAD 3.56083
56 5THZ SAH 3.56083
57 4IRP UDP 3.58566
58 1W6P NDG GAL 3.73134
59 1XDS SAM 3.85757
60 5JJR SAH 3.85757
61 5U7W ADE 3.85757
62 4DSG UDP 3.85757
63 2YX1 SFG 3.86905
64 4PU6 ASP 4.06091
65 1FP2 SAH 4.1543
66 3HQ9 OXL 4.1543
67 4W6Z 8ID 4.1543
68 3ICS FAD 4.1543
69 3ICR FAD 4.1543
70 1YKJ FAD