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Receptor
PDB id Resolution Class Description Source Keywords
4IF4 2.35 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE MAGNESIUM AND BERYLLOFLUORIDE-ACTIV FROM STAPHYLOCOCCUS AUREUS STAPHYLOCOCCUS AUREUS RESPONSE REGULATOR TWO-COMPONENT SYSTEM BACTERIAL SIGNALLIBINDING TRANSCRIPTION FACTOR TRANSCRIPTION REGULATION PHOSPHORYLATION TRANSCRIPTION
Ref.: PHOSPHORYLATION-DEPENDENT CONFORMATIONAL CHANGES AN REARRANGEMENTS IN STAPHYLOCOCCUS AUREUS VRAR ACTIVA PROC.NATL.ACAD.SCI.USA V. 110 8525 2013
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BEF C:301;
A:301;
D:301;
B:301;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
66.007 Be F3 [Be-]...
SO4 C:302;
D:302;
B:302;
A:302;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
MG B:300;
D:300;
A:300;
C:300;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4IF4 2.35 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE MAGNESIUM AND BERYLLOFLUORIDE-ACTIV FROM STAPHYLOCOCCUS AUREUS STAPHYLOCOCCUS AUREUS RESPONSE REGULATOR TWO-COMPONENT SYSTEM BACTERIAL SIGNALLIBINDING TRANSCRIPTION FACTOR TRANSCRIPTION REGULATION PHOSPHORYLATION TRANSCRIPTION
Ref.: PHOSPHORYLATION-DEPENDENT CONFORMATIONAL CHANGES AN REARRANGEMENTS IN STAPHYLOCOCCUS AUREUS VRAR ACTIVA PROC.NATL.ACAD.SCI.USA V. 110 8525 2013
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 4IF4 - BEF Be F3 [Be-](F)(F....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 4IF4 - BEF Be F3 [Be-](F)(F....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 4IF4 - BEF Be F3 [Be-](F)(F....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BEF; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 BEF 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4IF4; Ligand: BEF; Similar sites found with APoc: 542
This union binding pocket(no: 1) in the query (biounit: 4if4.bio2) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 4L6C 0BT None
2 6CI9 NAP None
3 4LTN FMN None
4 4LTN NAI None
5 1OSS BEN None
6 1NYT NAP None
7 2JDU MFU None
8 2PKA BEN None
9 2B4Q NAP None
10 3F3E LEU None
11 3L6R MLI None
12 4IWN GEK None
13 3UC5 ATP None
14 5K9B FMN None
15 6EQS BV8 0.961538
16 3RIY NAD 0.961538
17 5OCM NAP 0.961538
18 2W9S NDP 1.24224
19 5MW4 5JU 1.44231
20 2AE2 PTO 1.44231
21 2AE2 NAP 1.44231
22 4RF2 NAP 1.44231
23 5LLT DND 1.44231
24 1UAY ADN 1.44231
25 4MCC 21X 1.44231
26 4J4H 1J1 1.44231
27 4J4H NAI 1.44231
28 4MUS LY0 1.44231
29 4MUS 2D8 1.44231
30 5FS0 5JC 1.44231
31 5Z20 NAI 1.44231
32 4YAG NAI 1.44231
33 2DFV NAD 1.44231
34 3L8G GMB 1.60428
35 3EWP APR 1.69492
36 3B2Q ATP 1.92308
37 4JK3 NAD 1.92308
38 2BDG PBZ 1.92308
39 4EA7 JB2 1.92308
40 4EA7 COA 1.92308
41 2VT3 ATP 1.92308
42 2NSX IFM 1.92308
43 2F6U CIT 1.92308
44 2W68 SIA GAL BGC 2.05128
45 4YP5 NAP 2.20994
46 4GKV NAD 2.40385
47 4CE5 PDG 2.40385
48 4UUG PXG 2.40385
49 4O97 NTX 2.40385
50 1UWK URO 2.40385
51 1UWK NAD 2.40385
52 4PIO SAH 2.40385
53 4PIO AVI 2.40385
54 4XQC NAD 2.40385
55 4XQC 13D 2.40385
56 5AHO TLA 2.40385
57 1NPD NAD 2.40385
58 4W6Z 8ID 2.40385
59 1V7C HEY 2.40385
60 2EV9 SKM 2.40385
61 2EV9 NAP 2.40385
62 3MAG SAH 2.40385
63 3MCT SAH 2.40385
64 3QPB R1P 2.40385
65 1OBB NAD 2.40385
66 2PTM CMP 2.52525
67 6EMU SAM 2.53807
68 1L3I SAH 2.60417
69 4PTZ FMN 2.6178
70 1YQD NAP 2.88462
71 5A04 NDP 2.88462
72 4BVA NDP 2.88462
73 4BVA T3 2.88462
74 5A04 BGC 2.88462
75 1YNS HPO 2.88462
76 1PL6 NAD 2.88462
77 1PL6 572 2.88462
78 4IMG NGF 2.88462
79 1H2B NAJ 2.88462
80 1KOL NAD 2.88462
81 3AR5 TM1 2.88462
82 3HQP ATP 2.88462
83 3WQQ IB3 2.88462
84 3WQQ NDP 2.88462
85 4H8N NDP 2.88462
86 2WZM NA7 2.88462
87 2DTX BMA 2.88462
88 3ZF8 GDP 2.88462
89 2DC1 NAD 2.88462
90 1N2X SAM 2.88462
91 1EIX BMQ 2.88462
92 5UFN SAH 2.88462
93 1PQ7 ARG 2.88462
94 2DBZ NAP 2.88462
95 3UZO GLU 2.88462
96 2OBF SAH 2.88462
97 6ECU SAH 2.88462
98 1KYQ NAD 2.88462
99 1EBF NAD 2.88462
100 1IYE PGU 2.88462
101 2OBF F83 2.88462
102 5WP4 SAH 2.88462
103 1XHC FAD 2.88462
104 3JSX CC2 2.88462
105 3JSX FAD 2.88462
106 1SOW NAD 2.88462
107 6ECW SAH 2.88462
108 3HQP FDP 2.88462
109 3RG9 WRA 2.88462
110 3RG9 NDP 2.88462
111 2BNF UTP 2.88462
112 4D79 ATP 2.88462
113 5KOK SAH 2.88462
114 2FZW NAD 2.94906
115 2D2I NAP 3.15789
116 1VKF CIT 3.19149
117 1B1C FMN 3.31492
118 4KM2 ATR 3.35196
119 4KM2 TOP 3.35196
120 5DX9 T6P 3.36538
121 1C1X NAD 3.36538
122 1C0I FAD 3.36538
123 1C0I BE2 3.36538
124 1L7P SEP 3.36538
125 1BW9 NAD 3.36538
126 2QQF A1R 3.36538
127 1BXG NAD 3.36538
128 4U0W 16G 3.36538
129 1AE1 NAP 3.36538
130 4BTI 7R9 3.36538
131 4D8N 0HM 3.36538
132 1MI3 NAD 3.36538
133 2OD9 A1R NCA 3.36538
134 3VC1 GST 3.36538
135 3VC1 SAH 3.36538
136 1HSK FAD 3.36538
137 1SAY PYR 3.36538
138 1SZD APR 3.36538
139 2ZA5 2FF 3.36538
140 2C7G FAD 3.36538
141 2C7G ODP 3.36538
142 5KVA SAM 3.36538
143 2P3T 993 3.36538
144 5Z21 NAI 3.36538
145 5TXR PLP 3.36538
146 2O4C NAD 3.36538
147 5ZZ6 NAD 3.36538
148 1K3T BRZ 3.36538
149 2X3F APC 3.36538
150 1SQA UI1 3.36538
151 2GLX NDP 3.36538
152 3WQD PLP 999 3.36538
153 5UAO FAD 3.36538
154 2VH6 GSV 3.36538
155 1KPG SAH 3.36538
156 4Z0H NAD 3.36538
157 1X87 NAD 3.36538
158 5ZZ6 ADP 3.36538
159 5THQ NDP 3.36538
160 1H6C NDP 3.4642
161 4JWJ SAH 3.46535
162 3B20 NAD 3.53982
163 2CIG 1DG 3.77358
164 5JE8 NAD 3.84615
165 4EIL NDP 3.84615
166 1E3I CXF 3.84615
167 5TP0 BRN 3.84615
168 2E5V FAD 3.84615
169 4D04 FAD 3.84615
170 4D04 NAP 3.84615
171 4JWF SAH 3.84615
172 4JWH SAH 3.84615
173 2DPM SAM 3.84615
174 5Z6T NAP 3.84615
175 4NTD FAD 3.84615
176 2ADA HPR 3.84615
177 1EB1 ZAL PRO MMO 3.84615
178 2CN0 F25 3.84615
179 4E5N NAD 3.84615
180 1MUU NAD 3.84615
181 3BWN PMP 3.84615
182 4KOA NDP 3.84615
183 1SL3 170 3.84615
184 2FLI DX5 3.84615
185 1ZGD NAP 3.84615
186 1KPH SAH 3.84615
187 4EUE NAI 3.84615
188 4KCT FDP 3.84615
189 5U19 827 3.84615
190 5U19 SAH 3.84615
191 3DAA PDD 3.84615
192 5XDT MB3 3.84615
193 1L1E SAH 3.84615
194 2EWM NAD 3.84615
195 1R6T TYM 3.84615
196 1MV8 NAD 3.84615
197 3W6G FLC 3.84615
198 2GVJ DGB 3.84615
199 4AX9 N5N 3.84615
200 2ZKJ ADP 3.84615
201 1R6U TYM 3.84615
202 4IP7 FBP 3.84615
203 1RYD NDP 3.87597
204 1EJ0 SAM 3.88889
205 4BJ8 BTN 3.96825
206 1T0I FMN 4.18848
207 3E81 SLB 4.26829
208 4CNG SAH 4.31373
209 3OCZ SRA 4.32692
210 3A1C ACP 4.32692
211 2F1K NAP 4.32692
212 1F74 NAY 4.32692
213 1D1T NAD 4.32692
214 2NXE SAM 4.32692
215 5FEU NAP 4.32692
216 1RM0 NAI 4.32692
217 1RM0 D6P 4.32692
218 3Q3C NAD 4.32692
219 1YKF NAP 4.32692
220 3LXD FAD 4.32692
221 3WCZ NAP 4.32692
222 1F8G NAD 4.32692
223 4LPS GDP 4.32692
224 3T7S SAM 4.32692
225 1GUZ NAD 4.32692
226 5GT9 NAP 4.32692
227 3WG6 NDP 4.32692
228 5MGZ SAH 4.32692
229 3HDY GDU 4.32692
230 1DBT U5P 4.32692
231 5UAV TFB 4.32692
232 5UAV NDP 4.32692
233 1TPY SAH 4.32692
234 1KNR FAD 4.32692
235 3HDY FAD 4.32692
236 1XG5 NAP 4.32692
237 6FRN FMN 4.32692
238 5N6C NAD 4.32692
239 4S28 SAH 4.32692
240 4S28 AIR 4.32692
241 4M7V RAR 4.57143
242 4M7V NAP 4.57143
243 2UZ2 BTN 4.61538
244 1AKV FMN 4.7619
245 1QH9 LAC 4.80769
246 2P69 PLP 4.80769
247 1LDN NAD 4.80769
248 1S7G APR 4.80769
249 6ER9 NAP 4.80769
250 6ER9 FAD 4.80769
251 2VTD LKM 4.80769
252 4IQY AR6 4.80769
253 1ZEM NAD 4.80769
254 1M2K APR 4.80769
255 3CV6 NAP 4.80769
256 3CV6 HXS 4.80769
257 5F5N NAD 4.80769
258 1A5Z NAD 4.80769
259 5U8U FAD 4.80769
260 5KZD RCJ 4.80769
261 1DJN ADP 4.80769
262 4L8V NAP 4.80769
263 3ATY FMN 4.80769
264 5I7A 68Q 4.80769
265 1PJS NAD 4.80769
266 1S7G NAD 4.80769
267 3V1Y NAD 4.80769
268 4J75 TYM 4.88998
269 5XNC MTA 5.28846
270 2NYA MGD 5.28846
271 2IV2 2MD 5.28846
272 2VPY MGD 5.28846
273 4U8P FDA 5.28846
274 4U8P UDP 5.28846
275 2V6G NAP 5.28846
276 2IV2 MGD 5.28846
277 3WDM ADN 5.28846
278 2OOR NAD 5.28846
279 1L7E NAI 5.28846
280 2NPX NAD 5.28846
281 3ZNN FAD 5.28846
282 3ZNN 4WL 5.28846
283 4CP8 MLI 5.28846
284 3GFB NAD 5.28846
285 1NM5 NAD 5.28846
286 3U31 NAD 5.28846
287 3C8Z 5CA 5.28846
288 4OGN 2U5 5.71429
289 2WFG ZZB 5.74713
290 1Z4O GL1 5.76923
291 1TE2 PGA 5.76923
292 2JHF NAD 5.76923
293 4TQG NDP 5.76923
294 1TLL FMN 5.76923
295 3WGT FAD 5.76923
296 3WGT QSC 5.76923
297 6EL3 NAP 5.76923
298 4ISS TAR 5.76923
299 2CVZ NDP 5.76923
300 1DLJ NAI 5.76923
301 1DLJ UGA 5.76923
302 1W8D NAP 5.76923
303 4R3U 3HC 5.76923
304 4R3U 3KK 5.76923
305 3KJS DQ1 5.76923
306 1TMO 2MD 5.76923
307 2RGJ FAD 5.76923
308 1WP4 NDP 5.76923
309 1VFS DCS 5.76923
310 2WPB ZZI 5.76923
311 1W73 NAP 5.76923
312 5I39 FAD 5.76923
313 4AP3 NAP 5.76923
314 4AP3 FAD 5.76923
315 3KJS NAP 5.76923
316 5DF1 58X 5.76923
317 5DF1 NAP 5.76923
318 1RLZ NAD 5.76923
319 4ZSI GLP 5.84795
320 2JAR UMP 6
321 1N1D C2G 6.20155
322 1L7N ALF 6.25
323 1L7N AF3 6.25
324 2UUU PL3 6.25
325 1P9P SAH 6.25
326 1U3U NAD 6.25
327 1U3U BNF 6.25
328 6A6A DAL 6.25
329 1BZY IMU 6.25
330 2RH4 EMO 6.25
331 1O5R FR9 6.25
332 4ZGS NAD 6.25
333 3ABI NAD 6.25
334 4B74 1LH 6.25
335 3AXB PRO 6.25
336 3AXB FAD 6.25
337 3GD4 FAD 6.25
338 2IXB NAD 6.25
339 2IXB A2G 6.25
340 2C42 PYR 6.25
341 2C42 TPP 6.25
342 3QV1 NAD 6.25
343 2FR1 NDP 6.25
344 4YDD MGD 6.73077
345 4YDD MD1 6.73077
346 1YF4 CYS TYR PHE GLN ASN CYS PRO ARG GLY NH2 6.73077
347 4KP7 NAP 6.73077
348 1J49 NAD 6.73077
349 4KP7 1UQ 6.73077
350 1BZL FAD 6.73077
351 1O94 ADP 6.73077
352 3X0D SAH 6.73077
353 1OMZ UD2 6.73077
354 3NDJ SAH 6.73077
355 3NDJ JHZ 6.73077
356 5J5Z FAD 6.73077
357 1BZL GCG 6.73077
358 3CAQ NDP 6.73077
359 5DM1 SAH 6.73077
360 5DM1 5D7 6.73077
361 2C6Q IMP 6.73077
362 2PTR 2SA 6.73077
363 4LAE 1VM 7.18563
364 4LAE NAP 7.18563
365 3T31 FAD 7.21154
366 3T31 DCQ 7.21154
367 1H0H MGD 7.21154
368 5WS9 AMP 7.21154
369 1HDR NAD 7.21154
370 1DL5 SAH 7.21154
371 4ZVV NAD 7.21154
372 4ZVV GN0 7.21154
373 1LLU NAD 7.21154
374 3VPH NAD 7.21154
375 6FHO FAD 7.21154
376 4PNE SAH 7.21154
377 9LDB NAD 7.21154
378 9LDT NAD 7.21154
379 3VPH OXM 7.21154
380 6A0S HSE 7.21154
381 6A0S NDP 7.21154
382 1H0H 2MD 7.21154
383 1G8K MGD 7.69231
384 2B5W NAP 7.69231
385 1CDO NAD 7.69231
386 3KB6 NAD 7.69231
387 3SSO SAH 7.69231
388 5MLR NAP 7.69231
389 5MLR GRQ 7.69231
390 4RVG TYD 7.69231
391 2DT5 NAD 7.69231
392 6APV 3L4 7.69231
393 2J8Z NAP 7.69231
394 3UOY NAP 7.69231
395 3UOY FAD 7.69231
396 5E72 SAM 7.69231
397 4FE3 U5P 8.17308
398 2VHW NAI 8.17308
399 2AKO ADP 8.17308
400 4NBU NAI 8.17308
401 5GM1 SAH 8.17308
402 5DK4 5BX 8.17308
403 5DK4 ATP 8.17308
404 1P31 EPU 8.17308
405 1RWQ 5AP 8.17308
406 1P3D UMA 8.17308
407 1REQ DCA 8.17308
408 1UXG NAD 8.17308
409 1UXG FUM 8.17308
410 2GL0 ADN 8.38323
411 3EF0 ALF 8.65385
412 1ZXM ANP 8.65385
413 3C2O NTM 8.65385
414 6CEP NAD 8.65385
415 4G05 JZ3 8.65385
416 5YJI 8WO 8.65385
417 5YJI SAH 8.65385
418 5F33 PGH 8.65385
419 1NVT NAP 8.65385
420 1LOR BMP 8.65385
421 1X1Z BMP 8.65385
422 2GZ3 NAP 8.65385
423 4V0K GDP 8.87574
424 4POO SAM 9
425 1P0F NAP 9.13461
426 1KQF MGD 9.13461
427 1V5F TPP 9.13461
428 1V5F FAD 9.13461
429 1NVM NAD 9.13461
430 2YVF NAD 9.13461
431 2YVF FAD 9.13461
432 1V59 NAD 9.13461
433 3OND NAD 9.13461
434 3OND ADN 9.13461
435 2DRC MTX 9.43396
436 5O9F NAD 9.61539
437 5O9F 9ON 9.61539
438 3UCL CYH 9.61539
439 3UCL FAD 9.61539
440 3UCL NAP 9.61539
441 5JWC FAD 9.61539
442 1VKO NAD 9.61539
443 1RVX SIA GAL NAG 9.61539
444 3GEG NAD 9.61539
445 3GE7 AFQ 9.61539
446 2BGS NDP 9.61539
447 1T7Q COA 9.61539
448 1T7Q 152 9.61539
449 5WP5 SAH 9.61539
450 2E1T MLC 9.61539
451 3ML1 MGD 9.62963
452 4OR7 NAP 9.69697
453 2EC9 24X 10
454 2DKH 3HB 10.0962
455 2DKH FAD 10.0962
456 5T67 SAH 10.0962
457 5T67 JHZ 10.0962
458 5Y8L NAD 10.0962
459 5Y8L HUI 10.0962
460 1LTH NAD 10.0962
461 4HGP KDO 10.5556
462 2IVF MGD 10.5769
463 5YU3 NAD 10.5769
464 5YU3 PRO 10.5769
465 2IVF MD1 10.5769
466 2HK9 ATR 10.5769
467 1DMH LIO 10.5769
468 1WG8 SAM 10.5769
469 2QA1 FAD 10.5769
470 1NV8 SAM 10.5769
471 1NV8 MEQ 10.5769
472 4EWN 0VR 10.6719
473 1QZR CDX 11.0577
474 1QZR ANP 11.0577
475 3H7U NAP 11.0577
476 3JZB 4HY 11.0577
477 1CF2 NAP 11.0577
478 4CQE CQE 11.0577
479 5Q0F 9FA 11.0656
480 4XYB NDP 11.5385
481 2RCU BUJ 12.0192
482 1HKU NAD 12.0192
483 1R27 MGD 12.0192
484 2XTS MTE 12.0192
485 1Q1R FAD 12.0192
486 2GMH FAD 12.0192
487 6H21 UD1 12.0192
488 1OMO NAD 12.5
489 2HNK SAH 12.5
490 2V3V MGD 12.5
491 4DEC UDP 12.5
492 4DEC 3PG 12.5
493 2OHH FMN 12.5
494 1A0J BEN 12.9808
495 3BAZ NAP 12.9808
496 3GRU AMP 12.9808
497 4XB2 HSE 13.4615
498 4XB2 NDP 13.4615
499 5JBE GLC GLC GLC GLC GLC 13.4615
500 3H8V ATP 13.4615
501 1RQL VSO 13.9423
502 5K3W PLP 13.9423
503 1HYH NAD 13.9423
504 4MP8 MLI 13.9423
505 4MP8 NAD 13.9423
506 2ZJ1 ARJ 13.9423
507 2ZJ1 NAD 13.9423
508 1U72 MTX 13.9785
509 1U72 NDP 13.9785
510 1EU1 MGD 14.4231
511 4FZV SAM 14.9038
512 1M1B SPV 15.3846
513 3U4C NDP 15.3846
514 2JAH NDP 15.3846
515 1RC0 KT5 16.2679
516 4YSX FAD 16.3462
517 1ELI PYC 16.3462
518 1TMT DPN PRO ARG 16.6667
519 3VXE DPN PRO ARG 16.6667
520 1RIW OSC 16.6667
521 2ANM CDO 16.6667
522 1C4V IH2 16.6667
523 2FES 3SP 16.6667
524 1NZQ 162 16.6667
525 2ANK N12 17.6471
526 5DEP UD1 17.7885
527 3IX9 NDP 17.8947
528 1DMR PGD 18.2692
529 1ADO 13P 18.2692
530 1LSS NAD 18.5714
531 2YN4 39J 19.2308
532 2FY3 CHT 20.1923
533 2A92 NAI 21.1538
534 2HJR APR 23.5577
535 2CDU ADP 24.5192
536 2CDU FAD 24.5192
537 1W6U NAP 24.5192
538 2E7Z MGD 25.4808
539 2BOI MFU 25.6637
540 5ODQ FAD 25.7143
541 6F5Z SAH 34.4262
542 1L5Y BEF 38.0645
Pocket No.: 2; Query (leader) PDB : 4IF4; Ligand: BEF; Similar sites found with APoc: 198
This union binding pocket(no: 2) in the query (biounit: 4if4.bio2) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 2Q8M FBP None
2 1UTJ ABN None
3 3BBH SFG None
4 4CRZ ACO None
5 5OJL TXP None
6 1T9M FMN None
7 4HMX FMN 0.961538
8 4HMX WUB 0.961538
9 3LZW FAD 1.44231
10 3LZW NAP 1.44231
11 1VL8 NAP 1.44231
12 3RKR NAP 1.44231
13 5JE0 AZ8 1.44231
14 5JE0 SAH 1.44231
15 4EMI FAD 1.92308
16 4EMI NAD 1.92308
17 5AOV NAP 1.92308
18 2PWY SAH 1.92308
19 3GMB FAD 1.92308
20 3LST SAH 1.92308
21 1P1C SAH 2.01005
22 5CB3 APR 2.18579
23 1PNO NAP 2.22222
24 2O07 MTA 2.40385
25 2O07 SPD 2.40385
26 2F5Z FAD 2.40385
27 3KLJ FAD 2.40385
28 4D3F NAP 2.40385
29 3ORF NAD 2.40385
30 1UQX MMA 2.65487
31 4RSL FAD 2.88462
32 4RDH AMP 2.88462
33 3COW 52H 2.88462
34 4JDR FAD 2.88462
35 3FWN ATR 2.88462
36 3GF4 FAD 2.88462
37 1SC6 NAD 2.88462
38 1J0X NAD 2.88462
39 5LOG SAH 2.88462
40 6GAS FAD 2.88462
41 1FDJ 13P 2.88462
42 5BRT FAD 3.36538
43 2UVF AD0 3.36538
44 4UCI SAM 3.36538
45 4RQU NAD 3.36538
46 1XKQ NDP 3.36538
47 5O42 9JW 3.36538
48 5O42 NAD 3.36538
49 5O42 BGC 3.36538
50 5FFF 5XC 3.36538
51 5FFF NAP 3.36538
52 4PIV NDP 3.36538
53 1JQ3 AAT 3.36538
54 5U5G NAP 3.36538
55 1DSS NAD 3.36538
56 3ZQ6 ADP ALF 3.36538
57 1KEV NDP 3.84615
58 5D9O BGC BGC BGC BGC 3.84615
59 2G50 PYR 3.84615
60 1G79 PLP 3.84615
61 1PN0 FAD 3.84615
62 1PN0 IPH 3.84615
63 1Q0S SAH 3.84615
64 3VRY B43 3.84615
65 1O0S NAI 3.84615
66 6BQ6 TER 3.84615
67 1U1I NAD 3.84615
68 2A0W DIH 3.84615
69 5DNC ASN 3.84615
70 2HMT NAI 4.16667
71 1D1G NDP 4.16667
72 3HDY FDA 4.32692
73 1XHL NDP 4.32692
74 5OJI ISN 4.32692
75 5OJI NAP 4.32692
76 5YJF 8WO 4.32692
77 5YJF SAH 4.32692
78 2FK8 SAM 4.32692
79 5G3U ITW 4.32692
80 5G3U FDA 4.32692
81 1P77 ATR 4.32692
82 4TXI FAD 4.32692
83 1V8B NAD 4.32692
84 3BNK FMN 4.59184
85 1YJQ NAP 4.80769
86 4H1V GNP 4.80769
87 1X14 NAD 4.80769
88 6F9Q NAD 4.80769
89 4BWL MN9 4.80769
90 3GDH SAH 4.80769
91 5AYV KPL 4.80769
92 3REF GDP 5.15464
93 1NM5 NAP 5.28846
94 1G0H IPD 5.28846
95 5TUF FAD 5.28846
96 2OOR TXP 5.28846
97 1ZH8 NAP 5.28846
98 1Q7B NAP 5.28846
99 5XVH NAP 5.55556
100 3X44 PUS 5.76923
101 6F6J CUW 5.76923
102 6F6J SIN 5.76923
103 4DPL NAP 5.76923
104 5DLY 5D7 5.76923
105 5DLY SAH 5.76923
106 1EQ2 NAP 5.76923
107 3FJO FMN 5.76923
108 5U3F 7TS 5.76923
109 2CXG GLC G6D ACI GLC 5.76923
110 4ZSI 4R1 5.84795
111 4G5H NAP 6.25
112 4G5H UD7 6.25
113 5VN0 FAD 6.25
114 1V6A TRE 6.25
115 2VVL FAD 6.25
116 1E5Q NDP 6.25
117 5IL1 SAM 6.25
118 2VVM FAD 6.25
119 5EES NAP 6.25
120 1TID ATP 6.61765
121 5NMX FAD 6.73077
122 5JAQ NAI 6.73077
123 4YT4 FE9 6.73077
124 4USQ FAD 6.73077
125 5I60 67W 6.73077
126 3BGD SAH 6.73077
127 3BGD PM6 6.73077
128 1DJL NAP 6.76329
129 1OX5 1PR 7.21154
130 1D4O NAP 7.6087
131 5YEC ATP 7.69231
132 4OM8 NAD 7.69231
133 5O3N 4LU 7.69231
134 4A0S NAP 7.69231
135 1BVY FMN 7.8534
136 1H9A NAP 8.17308
137 2A8X FAD 8.17308
138 1CZA G6P 8.17308
139 4M52 M52 8.17308
140 4PTN GXV 8.17308
141 4M52 FAD 8.17308
142 5M67 NAD 8.17308
143 5HRA DAS 8.17308
144 5M67 ADE 8.17308
145 5M67 3D1 8.17308
146 5XLS URA 8.17308
147 3FHI ANP 8.44156
148 4C4A SAH 8.65385
149 3NJ4 NAD 8.65385
150 2GCG NDP 8.65385
151 3E7O 35F 8.65385
152 2YVJ FAD 9.13461
153 1JG9 GLC 9.61539
154 4A1O JLN 9.61539
155 4II2 ATP 9.61539
156 3BXF FBP 9.61539
157 1RSG FAD 9.61539
158 1ZQ9 SAM 9.61539
159 5IDM ANP 10.0559
160 5T9F TYR 10.0962
161 5T9F NAP 10.0962
162 1ZK7 FAD 10.0962
163 3TN7 NJP 10.0962
164 1SQF SAM 10.0962
165 6GAR FAD 10.0962
166 4B63 FAD 10.5769
167 4B63 NAP 10.5769
168 4B63 ORN 10.5769
169 1FL2 FAD 10.5769
170 2HK9 NAP 10.5769
171 4JB0 ENO 11.0577
172 2A5F NAD 11.4286
173 5MZI FYK 11.5385
174 4C3Y ANB 11.5385
175 4C3Y FAD 11.5385
176 2BOS GLA GAL GLC 11.7647
177 1LBZ FBP 12.0192
178 1GKZ ADP 12.0192
179 5HCN GCP 12.0192
180 3RNM FAD 12.069
181 5D6J ATP 12.1622
182 5GXU FMN 12.5
183 6BII NAP 12.5
184 2XIQ MLC 12.5
185 5L95 AMP 13.4615
186 5T9E NAP 13.9423
187 4DP3 MMV 13.9423
188 4DP3 NDP 13.9423
189 3G89 SAM 14.8594
190 2JAP NDP 15.3846
191 1I0S FMN 15.3846
192 2IZ1 ATR 15.3846
193 5EIN NAP 17.3077
194 5UY8 8UM 18.2692
195 5UY8 AMZ 18.2692
196 1GAD NAD 19.7115
197 2VYN NAD 19.7115
198 3PT9 SAH 24.0385
Pocket No.: 3; Query (leader) PDB : 4IF4; Ligand: BEF; Similar sites found with APoc: 37
This union binding pocket(no: 3) in the query (biounit: 4if4.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 5WQP NCA None
2 5WQP NAP None
3 1C4Q GLA GAL BGC None
4 1I1N SAH 1.44231
5 1XCL SAH 1.92308
6 4RDI ATP 2.88462
7 2WA2 SAM 2.88462
8 1KQN NAD 2.88462
9 4H2D FMN 3.0303
10 5U5N NAD 3.36538
11 5NII FAD 3.36538
12 3H9E NAD 3.36538
13 3B1J NAD 3.53982
14 1COY FAD 3.84615
15 1OBV FMN 4.73373
16 6H3O FAD 4.80769
17 1YB5 NAP 4.80769
18 5EYG NAP 5.28302
19 1AG9 FMN 5.71429
20 4XVU ATP 5.76923
21 5FA6 NAP 6.25
22 5FA6 FAD 6.25
23 4JJF FE9 6.25
24 1OC2 NAD 6.73077
25 1OC2 TDX 6.73077
26 3B1F NAD 6.73077
27 3H7R NAP 6.73077
28 1YP4 ADP 7.21154
29 3TAO PGH 7.69231
30 4XTX 590 9.13461
31 1J5P NAD 9.61539
32 1GAR U89 10.5769
33 4I3V NAD 11.0577
34 5WB6 9ZM 11.0656
35 2Q1W NAD 12.0192
36 1GY8 NAD 12.9808
37 1J3I NDP 13.9423
Pocket No.: 4; Query (leader) PDB : 4IF4; Ligand: BEF; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 4if4.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 4IF4; Ligand: BEF; Similar sites found with APoc: 41
This union binding pocket(no: 5) in the query (biounit: 4if4.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 4KIB SAH None
2 1RTF BEN 1.44231
3 4Z9D NAD 2.28571
4 1X7D NAD 2.40385
5 1X7D ORN 2.40385
6 1T5B FMN 2.48756
7 2CDC XYP 2.88462
8 2CDC NAP 2.88462
9 3VBK COA 2.92683
10 3VBK 0FX 2.92683
11 1GJC 130 3.36538
12 5ZFI 9C9 3.36538
13 1R37 ETX 3.36538
14 4LY9 1YY 3.84615
15 4LY9 S6P 3.84615
16 4H4D 10E 3.84615
17 1EFV FAD 3.84615
18 1EFV AMP 3.84615
19 1K27 MTM 4.32692
20 1EKO I84 4.80769
21 1EKO NAP 4.80769
22 4D7E FAD 4.80769
23 3ND6 ATP 5.26316
24 5VN0 NAI 6.25
25 1J09 ATP 6.25
26 1J09 GLU 6.25
27 5FBK TCR 6.25
28 2PAR TMP 6.46766
29 3ZXR P3S 6.73077
30 3ZXR IQ1 6.73077
31 5NA1 FAD 6.86275
32 4IXH IMP 7.69231
33 4OPC FDA 8.17308
34 4OPC PGT 8.17308
35 1T26 GBD 8.65385
36 1T26 NAI 8.65385
37 2G5C NAD 8.65385
38 5ZCM NDP DTT 8.65385
39 1FC4 AKB PLP 10.5769
40 3OVR 5SP 11.0577
41 3MJH GTP 20.5882
Pocket No.: 6; Query (leader) PDB : 4IF4; Ligand: BEF; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 4if4.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 4IF4; Ligand: BEF; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 4if4.bio3) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 4IF4; Ligand: BEF; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 4if4.bio3) has 9 residues
No: Leader PDB Ligand Sequence Similarity
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