Receptor
PDB id Resolution Class Description Source Keywords
4II9 1.66 Å EC: 2.3.2.10 CRYSTAL STRUCTURE OF WEISSELLA VIRIDESCENS FEMXVV NON-RIBOSO ACID TRANSFERASE IN COMPLEX WITH A PEPTIDYL-RNA CONJUGATE WEISSELLA VIRIDESCENS FEMX PEPTIDOGLYCAN TRANSFERASE PEPTIDYL-RNA CONJUGATE COMTRANSFERASE-PEPTIDE-RNA COMPLEX
Ref.: THE STRUCTURE OF FEMXWV IN COMPLEX WITH A PEPTIDYL-CONJUGATE: MECHANISM OF AMINOACYL TRANSFER FROM ALA-TRNA(ALA) TO PEPTIDOGLYCAN PRECURSORS ANGEW.CHEM.INT.ED.ENGL. V. 52 7278 2013
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
UDP ALA FGA CYS DAL DAL MUB C C A9Z B:101;
 Valid;
 none;
 ic50 = 930 nM
2137.55 n/a S(CC(...
GOL A:402;
 Invalid;
 none;
 submit data
92.094 C3 H8 O3 C(C(C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4II9 1.66 Å EC: 2.3.2.10 CRYSTAL STRUCTURE OF WEISSELLA VIRIDESCENS FEMXVV NON-RIBOSO ACID TRANSFERASE IN COMPLEX WITH A PEPTIDYL-RNA CONJUGATE WEISSELLA VIRIDESCENS FEMX PEPTIDOGLYCAN TRANSFERASE PEPTIDYL-RNA CONJUGATE COMTRANSFERASE-PEPTIDE-RNA COMPLEX
Ref.: THE STRUCTURE OF FEMXWV IN COMPLEX WITH A PEPTIDYL-CONJUGATE: MECHANISM OF AMINOACYL TRANSFER FROM ALA-TRNA(ALA) TO PEPTIDOGLYCAN PRECURSORS ANGEW.CHEM.INT.ED.ENGL. V. 52 7278 2013
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1P4N - UMA FGA LYS DAL DAL n/a n/a
2 4II9 ic50 = 930 nM UDP ALA FGA CYS DAL DAL MUB C C A9Z n/a n/a
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1P4N - UMA FGA LYS DAL DAL n/a n/a
2 4II9 ic50 = 930 nM UDP ALA FGA CYS DAL DAL MUB C C A9Z n/a n/a
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1P4N - UMA FGA LYS DAL DAL n/a n/a
2 4II9 ic50 = 930 nM UDP ALA FGA CYS DAL DAL MUB C C A9Z n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: UDP ALA FGA CYS DAL DAL MUB C C A9Z; Similar ligands found: 8
No: Ligand ECFP6 Tc MDL keys Tc
1 UDP ALA FGA CYS DAL DAL MUB C C A9Z 1 1
2 UAG API 0.548246 0.817204
3 UMA FGA LYS DAL DAL 0.477551 0.829787
4 UML 0.454167 0.819149
5 G 6MZ C U 0.444444 0.808511
6 6MZ C U 0.44206 0.819149
7 G 5MC C U 0.423387 0.793814
8 UAG 0.415966 0.784946
Similar Ligands (3D)
Ligand no: 1; Ligand: UDP ALA FGA CYS DAL DAL MUB C C A9Z; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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