Receptor
PDB id Resolution Class Description Source Keywords
4J81 1.75 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF BETA'-COP/INSIG-1 COMPLEX SACCHAROMYCES CEREVISIAE BETA PROPELLER DOMAIN DILYSINE MOTIF COPI ER RETRIEVAL PTRANSPORT
Ref.: RULES FOR THE RECOGNITION OF DILYSINE RETRIEVAL MOT COATOMER. EMBO J. V. 32 926 2013
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
LYS PRO HIS SER ASP C:1;
D:1;
 Valid;
Valid;
 none;
none;
 submit data
582.615 n/a O=C([...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4J73 1.44 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF BETA'-COP/P25 COMPLEX SACCHAROMYCES CEREVISIAE BETA PROPELLER DILYSINE MOTIF ER RETRIEVAL SIGNAL COATOMERECOGNITION PROTEIN TRANSPORT
Ref.: RULES FOR THE RECOGNITION OF DILYSINE RETRIEVAL MOT COATOMER. EMBO J. V. 32 926 2013
Members (10)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1610 families.
1 4J84 - ALA ARG LYS LEU ASP n/a n/a
2 4J77 - ALA LYS GLU LYS SER ASP n/a n/a
3 4J79 - GLU LYS VAL HIS VAL GLN n/a n/a
4 2YNO - ALA ALA ALA ALA ALA n/a n/a
5 4J73 - PHE GLU ALA LYS LYS LEU VAL n/a n/a
6 4J81 - LYS PRO HIS SER ASP n/a n/a
7 2YNN - CYS THR PHE LYS THR LYS THR ASN n/a n/a
8 4J78 - LYS THR LYS LEU LEU n/a n/a
9 4J82 - LYS SER HIS GLN GLU n/a n/a
10 4J86 - THR PHE LYS LYS THR ASN n/a n/a
70% Homology Family (10)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1331 families.
1 4J84 - ALA ARG LYS LEU ASP n/a n/a
2 4J77 - ALA LYS GLU LYS SER ASP n/a n/a
3 4J79 - GLU LYS VAL HIS VAL GLN n/a n/a
4 2YNO - ALA ALA ALA ALA ALA n/a n/a
5 4J73 - PHE GLU ALA LYS LYS LEU VAL n/a n/a
6 4J81 - LYS PRO HIS SER ASP n/a n/a
7 2YNN - CYS THR PHE LYS THR LYS THR ASN n/a n/a
8 4J78 - LYS THR LYS LEU LEU n/a n/a
9 4J82 - LYS SER HIS GLN GLU n/a n/a
10 4J86 - THR PHE LYS LYS THR ASN n/a n/a
50% Homology Family (11)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1144 families.
1 4J84 - ALA ARG LYS LEU ASP n/a n/a
2 4J77 - ALA LYS GLU LYS SER ASP n/a n/a
3 4J79 - GLU LYS VAL HIS VAL GLN n/a n/a
4 2YNO - ALA ALA ALA ALA ALA n/a n/a
5 4J73 - PHE GLU ALA LYS LYS LEU VAL n/a n/a
6 4J81 - LYS PRO HIS SER ASP n/a n/a
7 2YNN - CYS THR PHE LYS THR LYS THR ASN n/a n/a
8 4J78 - LYS THR LYS LEU LEU n/a n/a
9 4J82 - LYS SER HIS GLN GLU n/a n/a
10 4J86 - THR PHE LYS LYS THR ASN n/a n/a
11 4J8B - LEU LYS THR LYS LEU LEU n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: LYS PRO HIS SER ASP; Similar ligands found: 66
No: Ligand ECFP6 Tc MDL keys Tc
1 LYS PRO HIS SER ASP 1 1
2 LYS ARG ARG ARG HIS PRO SER GLY 0.529851 0.907692
3 LYS PRO ILE VAL VAL LEU HIS GLY TYR 0.527027 0.785714
4 LYS PRO LYS 0.524752 0.783333
5 TYR TYR SER ILE ILE PRO HIS SER ILE 0.510791 0.842857
6 LYS ARG ARG ARG HIS PRO SER 0.5 0.861538
7 GLU LYS PRO SER SER SER 0.5 0.916667
8 SER ARG ASP HIS SER ARG THR PRO MET 0.496689 0.821918
9 SER ASN TRP SER HIS PRO GLN PHE GLU LYS 0.49359 0.921875
10 LYS SER HIS GLN GLU 0.491667 0.866667
11 LYS TYR TYR SER ILE ILE PRO HIS SER ILE 0.482517 0.842857
12 HIS HIS ALA SER PRO ARG LYS 0.479167 0.835821
13 HIS PRO PHE 0.474138 0.822581
14 GLU ALA ASP PRO THR GLY HIS SER TYR 0.474026 0.895522
15 GLY SER ASP PRO PHE LYS 0.472441 0.918033
16 GLY SER ASP PRO TRP LYS 0.470588 0.920635
17 ILE LEU LYS GLU PRO VAL HIS GLY VAL 0.469799 0.830769
18 PRO PRO HIS SER TPO 0.469697 0.855072
19 PHE SER HIS PRO GLN ASN THR 0.468531 0.9375
20 LYS HIS LYS 0.46729 0.766667
21 HIS ALA TPO PRO PRO LYS LYS GLU ALA ASP 0.464516 0.814286
22 ARG ALA HIS SEP SER PRO ALA SER LEU GLN 0.461538 0.830986
23 ACE PRO LEU HIS SER TPO 0.458015 0.783784
24 TYR TYR SER ILE ALA PRO HIS SER ILE 0.455782 0.816901
25 TYR LEU LYS GLU PRO VAL HIS GLY VAL 0.455128 0.797101
26 SER HIS SEP SER PRO ALA SER LEU 0.448276 0.816901
27 SER HIS SEP SER PRO ALA SER LEU GLN 0.441558 0.830986
28 DHI PRO PHE HIS LEU LEU VAL TYR 0.441558 0.757143
29 LYS VAL ALA PRO PRO ILE PRO HIS ARG 0.435897 0.732394
30 TYR PRO SER LYS PRO ASP ASN PRO GLY GLU 0.434426 0.84375
31 GLY ASP CYS PHE SER LYS PRO ARG 0.430464 0.850746
32 ABA SER LEU TRP ASN GLY PRO HIS LEU 0.43038 0.882353
33 ALA ARG SER HIS SEP TYR PRO ALA 0.43038 0.74359
34 GLY HIS ARG PRO 0.428571 0.830769
35 TYR PRO ASN VAL ASN ILE HIS ASN PHE 0.428571 0.802817
36 ALA LEU PRO HIS ALA ILE LEU ARG LEU 0.427632 0.757143
37 ACE PRO LEU HIS SER TPO ALA NH2 0.427536 0.783784
38 ARG SER HIS SEP SER PRO ALA SER LEU GLN 0.426829 0.786667
39 SER HIS PRO ARG PRO ILE ARG VAL 0.425676 0.842857
40 ASN TRP SER HIS PRO GLN PHE GLU LYS 0.425373 0.919355
41 LYS PRO PHE PTR VAL ASN VAL GLU PHE 0.424051 0.723684
42 LYS PRO PHE PTR VAL ASN VAL NH2 0.422819 0.710526
43 ARG ILE ILE PRO ARG HIS LEU GLN LEU 0.422078 0.785714
44 LEU PRO PHE ASP LYS SER THR ILE MET 0.421384 0.788732
45 GLY GLN VAL PRO PHE SER LYS GLU GLU CYS 0.42 0.848485
46 SER PRO LEU ASP SER LEU TRP TRP ILE 0.42 0.84058
47 ALA ASN SER ARG HIS PRO THR SER ILE ILE 0.418919 0.842857
48 LYS PRO ILE VAL GLN TYR ASP ASN PHE 0.417722 0.788732
49 GLU LEU PRO PRO VAL LYS ILE HIS CYS 0.417178 0.833333
50 ACE PRO LEU HIS SER TPO MET NH2 0.416667 0.753247
51 HIS SER LYS LYS LYS CYS ASP GLU LEU 0.416058 0.815385
52 BOC HIS PRO PHE HIS STA LEU PHE 0.413333 0.791667
53 ASP TYR ASN PRO TYR LEU LEU PHE LEU LYS 0.412162 0.8
54 ALA LYS PHE ARG HIS ASP 0.411765 0.705882
55 ACE PHE HIS PRO ALA NH2 0.410853 0.769231
56 VAL VAL SER HIS PHE ASN ASP 0.410448 0.753846
57 LEU PRO PHE GLU LYS SER THR VAL MET 0.410256 0.8
58 BOC HIS PRO PHE HIS LOV ILE HIS 0.408805 0.716216
59 LYS PRO VAL LEU ARG THR ALA 0.408451 0.757143
60 SER THR GLY GLY VAL M3L LYS PRO HIS ARG 0.408046 0.776316
61 ACE CYS HIS PRO GLN ASN THR NH2 0.407143 0.892308
62 1IP CYS PHE SER LYS PRO ARG 0.405229 0.84058
63 SER SER CYS PRO LEU SER LYS 0.40458 0.815385
64 PHE ASN GLU LEU SER HIS LEU 0.403226 0.765625
65 ACE ASP PRO PRO LEU HIS SER TPO ALA NH2 0.402685 0.805556
66 LEU PRO PHE GLU LEU ARG GLY HIS LEU VAL 0.402439 0.760563
Similar Ligands (3D)
Ligand no: 1; Ligand: LYS PRO HIS SER ASP; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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