-->
Receptor
PDB id Resolution Class Description Source Keywords
4JNJ 1.9 Å NON-ENZYME: BINDING STRUCTURE BASED ENGINEERING OF STREPTAVIDIN MONOMER WITH A R BIOTIN DISSOCIATION RATE STREPTOMYCES AVIDINII BETA BARREL ENGINEERED STREPTAVIDIN VARIANT BIOTIN BIOTINPROTEIN PROTEIN BINDING
Ref.: STRUCTURE-BASED ENGINEERING OF STREPTAVIDIN MONOMER REDUCED BIOTIN DISSOCIATION RATE. PROTEINS V. 81 1621 2013
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
THR LYS VAL LYS C:131;
Invalid;
none;
submit data n/a n/a n/a n/a
ZN C:202;
B:203;
A:202;
D:202;
D:203;
A:204;
B:202;
B:204;
A:203;
Invalid;
Part of Protein;
Part of Protein;
Invalid;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
65.409 Zn [Zn+2...
BTN A:201;
D:201;
C:201;
B:201;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
244.311 C10 H16 N2 O3 S C1[C@...
GLN ASP THR PHE THR LYS VAL LYS A:127;
Invalid;
none;
submit data n/a n/a n/a n/a
GLN ASP THR PHE THR LYS VAL B:127;
Invalid;
none;
submit data n/a n/a n/a n/a
THR PHE THR LYS VAL LYS D:129;
Invalid;
none;
submit data n/a n/a n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4JNJ 1.9 Å NON-ENZYME: BINDING STRUCTURE BASED ENGINEERING OF STREPTAVIDIN MONOMER WITH A R BIOTIN DISSOCIATION RATE STREPTOMYCES AVIDINII BETA BARREL ENGINEERED STREPTAVIDIN VARIANT BIOTIN BIOTINPROTEIN PROTEIN BINDING
Ref.: STRUCTURE-BASED ENGINEERING OF STREPTAVIDIN MONOMER REDUCED BIOTIN DISSOCIATION RATE. PROTEINS V. 81 1621 2013
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 4JNJ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 4JNJ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
50% Homology Family (115)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 298 families.
1 2G5L - FME ASP VAL GLU ALA TRP LEU n/a n/a
2 3WZO - ZOE C16 H27 N3 O5 S C1[C@H]2[C....
3 2RTM - IMI C10 H17 N3 O2 S C1[C@H]2[C....
4 4Y59 Kd = 5.8 uM T21 C14 H8 F3 N O2 c1cc(cc(c1....
5 1NQM - BTN C10 H16 N2 O3 S C1[C@H]2[C....
6 1VWQ - HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
7 1NC9 - IMI C10 H17 N3 O2 S C1[C@H]2[C....
8 2RTI - GLL C4 H6 N4 O2 C12C(NC(=O....
9 5B5G Kd = 5.6 uM 6FX C14 H10 N2 O4 COC(=O)c1c....
10 4Y5D Kd = 1.2 uM MT6 C15 H11 N O4 COC(=O)c1c....
11 1SRJ - NAB C17 H12 N2 O3 c1ccc2c(c1....
12 4CPF - LH3 C32 H34 N4 O6 S COC(=O)c1c....
13 1NDJ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
14 2IZL Kd = 1 uM IMI C10 H17 N3 O2 S C1[C@H]2[C....
15 2RTJ - GLL C4 H6 N4 O2 C12C(NC(=O....
16 1SWR Kd = 0.12 uM BTN C10 H16 N2 O3 S C1[C@H]2[C....
17 1SWE - BTN C10 H16 N2 O3 S C1[C@H]2[C....
18 1SRF - MTB C17 H18 N2 O3 CC(C)(C)c1....
19 2RTO - IMI C10 H17 N3 O2 S C1[C@H]2[C....
20 1SWT - BTN C10 H16 N2 O3 S C1[C@H]2[C....
21 1SWP Ka = 100000000 M^-1 BTN C10 H16 N2 O3 S C1[C@H]2[C....
22 1VWG - ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2 n/a n/a
23 2RTF - BTN C10 H16 N2 O3 S C1[C@H]2[C....
24 1VWC - ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
25 1STS Ki = 10 uM PHE CYS HIS PRO GLN ASN THR NH2 n/a n/a
26 2IZI - BTN C10 H16 N2 O3 S C1[C@H]2[C....
27 1VWN Kd ~ 1500 nM ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
28 2IZF - BTN C10 H16 N2 O3 S C1[C@H]2[C....
29 1SWD - BTN C10 H16 N2 O3 S C1[C@H]2[C....
30 1LCW - SHM C11 H18 N2 O3 S C1[C@H]2[C....
31 1RXK - BNI C16 H20 N4 O4 S c1cc(ccc1N....
32 1SRG Ki = 5 uM MHB C14 H12 N2 O3 Cc1cc(ccc1....
33 1I9H - BNI C16 H20 N4 O4 S c1cc(ccc1N....
34 1VWR - HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
35 2IZH - BTN C10 H16 N2 O3 S C1[C@H]2[C....
36 2RTP - IMI C10 H17 N3 O2 S C1[C@H]2[C....
37 1SLD Kd = 270 nM ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
38 1KL3 Kd = 1.37 uM ASN TRP SER HIS PRO GLN PHE GLU LYS n/a n/a
39 1DF8 Kd = 0.2 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
40 3T6F - BTN C10 H16 N2 O3 S C1[C@H]2[C....
41 1VWO - ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2 n/a n/a
42 1VWK - HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
43 1SLG Kd = 125 uM PHE SER HIS PRO GLN ASN THR n/a n/a
44 2RTQ - IMI C10 H17 N3 O2 S C1[C@H]2[C....
45 1N43 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
46 3WZN - BTN C10 H16 N2 O3 S C1[C@H]2[C....
47 1VWD - ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
48 2Y3F - BTN C10 H16 N2 O3 S C1[C@H]2[C....
49 1VWL Kd = 2.33 uM HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
50 1VWA - PHE SER HIS PRO GLN ASN THR n/a n/a
51 2IZG - BTN C10 H16 N2 O3 S C1[C@H]2[C....
52 3MG5 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
53 1SRI Ki = 0.83 uM DMB C15 H14 N2 O3 Cc1cc(cc(c....
54 1KL5 Kd = 1 uM ASN TRP SER HIS PRO GLN PHE GLU LYS n/a n/a
55 1VWH - ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2 n/a n/a
56 1PTS - PHE SER HIS PRO GLN ASN THR n/a n/a
57 1MK5 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
58 1LUQ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
59 1VWB - ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
60 2IZK - GLL C4 H6 N4 O2 C12C(NC(=O....
61 1VWE - ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
62 2RTN - IMI C10 H17 N3 O2 S C1[C@H]2[C....
63 1MEP - BTN C10 H16 N2 O3 S C1[C@H]2[C....
64 3WYP - BTN C10 H16 N2 O3 S C1[C@H]2[C....
65 2RTL - IMI C10 H17 N3 O2 S C1[C@H]2[C....
66 1N9M - BTN C10 H16 N2 O3 S C1[C@H]2[C....
67 1VWI - HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
68 2IZJ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
69 1STR Ki = 17 uM ACE CYS HIS PRO GLN ASN THR NH2 n/a n/a
70 1VWP - ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2 n/a n/a
71 1VWJ - HIS PRO GLN GLY PRO PRO CYS LYS NH2 LEA n/a n/a
72 1LCV - SNR C9 H14 N2 O3 S C1[C@H]2[C....
73 1RSU Kd = 72 uM SER ASN TRP SER HIS PRO GLN PHE GLU LYS n/a n/a
74 2RTH - GLL C4 H6 N4 O2 C12C(NC(=O....
75 5B5F Kd = 5.6 uM 6F3 C14 H12 N2 O4 S CNS(=O)(=O....
76 2F01 Kd ~ 0.1 pM BTN C10 H16 N2 O3 S C1[C@H]2[C....
77 1VWM - ACE CYS HIS PRO GLN PHE CYS NH2 n/a n/a
78 2GH7 Kd ~ 0.1 pM BTN C10 H16 N2 O3 S C1[C@H]2[C....
79 4JNJ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
80 2JGS Kd = 10 fM BTN C10 H16 N2 O3 S C1[C@H]2[C....
81 3SZJ - BTN C10 H16 N2 O3 S C1[C@H]2[C....
82 3T2W Kd = 0.00000145 M BTN C10 H16 N2 O3 S C1[C@H]2[C....
83 3RDQ Kd = 0.49 nM DTB C10 H18 N2 O3 C[C@H]1[C@....
84 3RDO Kd = 0.14 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
85 3RDM Kd = 0.14 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
86 2OF8 - BNI C16 H20 N4 O4 S c1cc(ccc1N....
87 2FHL - BNI C16 H20 N4 O4 S c1cc(ccc1N....
88 2OFB - BNI C16 H20 N4 O4 S c1cc(ccc1N....
89 3X00 Kd = 0.83 nM ZOF ZOF EDN n/a n/a
90 2A5C Kd = 24 uM 8DA C10 H15 N5 O4 C1[C@H]([C....
91 3VGW Ka = 200000 M^-1 NVZ C12 H18 N2 O4 S CC(=O)N1[C....
92 1IJ8 - BNI C16 H20 N4 O4 S c1cc(ccc1N....
93 3VHI Ka = 2300000 M^-1 VHI C18 H22 N2 O5 S c1ccc(cc1)....
94 2A8G Kd = 205 uM GNG C10 H13 N5 O4 c1nc2c(n1[....
95 4I60 Kd = 1.87 uM B1R C20 H16 N2 O2 Ru S C1[C@H]2[C....
96 5IRW - D9P C26 H26 N2 O2 C[C@H]1[C@....
97 5F2B - 9RU C31 H41 Cl2 N5 O2 Ru S Cc1cc(c(c(....
98 4OKA - 5IR C18 H26 Ir N5 O4 S2 c1cc(ccc1N....
99 6AUL - BTN C10 H16 N2 O3 S C1[C@H]2[C....
100 4GJV - 0OD C21 H32 Cl3 N3 O2 Rh S CC12=C3([R....
101 6ESU Ki = 249.3 mM 6IR C18 H27 N5 O4 S2 c1cc(ccc1N....
102 4GJS - 0OD C21 H32 Cl3 N3 O2 Rh S CC12=C3([R....
103 2WPU Kd < 60 nM KYT C24 H39 Cl N5 O2 Ru S CC1=[CH]2C....
104 3PK2 - 4IR C28 H45 Cl Ir N5 O4 S2 C[CH]12[CH....
105 6ESS - 4IR C28 H45 Cl Ir N5 O4 S2 C[CH]12[CH....
106 2ZSC - BTN C10 H16 N2 O3 S C1[C@H]2[C....
107 3EW2 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
108 5N99 Kd = 61.3 uM ASN GLN DPR TRP GLN n/a n/a
109 4GGZ Kd = 0.066 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
110 2UYW - BTN C10 H16 N2 O3 S C1[C@H]2[C....
111 2UZ2 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
112 1SWG Kd = 43.9 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
113 4GD9 - BTN C10 H16 N2 O3 S C1[C@H]2[C....
114 4BCS Kd = 103 nM BTN C10 H16 N2 O3 S C1[C@H]2[C....
115 4EKV Kd = 0.00000145 M BTN C10 H16 N2 O3 S C1[C@H]2[C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BTN; Similar ligands found: 17
No: Ligand ECFP6 Tc MDL keys Tc
1 BTQ 1 1
2 BTN 1 1
3 SHM 0.884615 1
4 SNR 0.807692 1
5 BH7 0.734375 0.921569
6 IMI 0.644068 0.803922
7 BTI 0.62069 0.914894
8 B1R 0.6 0.632353
9 BYT 0.581081 0.87037
10 BNI 0.554054 0.656716
11 41M 0.554054 0.830189
12 B9P 0.5 0.796296
13 ZOF 0.493333 0.833333
14 LUV 0.476744 0.745763
15 NVZ 0.457143 0.75
16 LH3 0.455556 0.666667
17 BSO 0.454545 0.79661
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4JNJ; Ligand: BTN; Similar sites found with APoc: 153
This union binding pocket(no: 1) in the query (biounit: 4jnj.bio2) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 5DJU FMN None
2 2PR5 FMN None
3 1Y7P RIP None
4 4HIA FMN None
5 6GG9 FMN None
6 3MTX PGT None
7 1N9L FMN None
8 5HCY 60D None
9 4WUJ FMN None
10 2TPS TPS None
11 4C2V YJA None
12 5EFW FMN None
13 3F9W SAH None
14 2YAK OSV None
15 5JNN 6LM None
16 1J3R 6PG None
17 3T50 FMN 1.73913
18 3D72 FAD 1.73913
19 3IS2 FAD 1.73913
20 2GU8 796 2.6087
21 5SVV FMN 2.6087
22 4CQM NAP 2.6087
23 4J25 OGA 2.6087
24 3D3W NAP 2.6087
25 3DAK ANP 2.6087
26 3I6I NDP 3.47826
27 4NS0 PIO 3.47826
28 4XF6 INS 3.47826
29 4XF6 LIP 3.47826
30 4CYI ATP 3.47826
31 4GYI ADP 3.47826
32 1IY8 NAD 3.47826
33 1VLH PNS 3.47826
34 4B1M FRU FRU 3.47826
35 2C2A ADP 3.47826
36 4XF6 ADP 3.47826
37 5BU3 4W9 4.34783
38 6MPT C30 4.34783
39 3GM5 CIT 4.34783
40 5WQP NCA 4.34783
41 3SJU NDP 4.34783
42 2JAP NDP 4.34783
43 4FFG LBS 4.34783
44 2JAH NDP 4.34783
45 3OIG NAD 4.34783
46 5YWX GSH 4.34783
47 5YWX 93C 4.34783
48 4EE7 PIS 4.34783
49 2V58 LZJ 4.34783
50 4LOC OXM 4.34783
51 3LF0 ATP 4.38596
52 1V7R CIT 5.21739
53 4YZC STU 5.21739
54 1QIN GIP 5.21739
55 3FW4 CAQ 5.21739
56 4CCN OGA 5.21739
57 1SNY NAP 5.21739
58 4CCK OGA 5.21739
59 5HV0 AKG 5.21739
60 2JIG PD2 5.21739
61 1QY1 PRZ 5.21739
62 3AY6 NAI 5.21739
63 4Y3O OGA 5.21739
64 5O9W AKG 5.21739
65 2HZQ STR 5.21739
66 4CCO OGA 5.21739
67 4R3U 3KK 5.21739
68 4R3U 3HC 5.21739
69 4P87 4NP 5.21739
70 5Z4T BMA BMA 5.21739
71 2AMT GPP 5.66038
72 2A1L PCW 6.08696
73 4NBW NAD 6.08696
74 1EWJ BLM 6.08696
75 6F9Q NAD 6.08696
76 2CSN CKI 6.08696
77 5UIU 8CG 6.08696
78 4D06 NAR 6.08696
79 2GJ5 VD3 6.95652
80 4OMJ 2TX 6.95652
81 3EWK FAD 6.95652
82 1U7T TDT 6.95652
83 4J36 FAD 6.95652
84 5HA0 LTD 6.95652
85 5EO8 TFU 6.95652
86 5TO8 7FM 6.95652
87 1M5W DXP 6.95652
88 6BU0 IHP 7.82609
89 4EES FMN 7.82609
90 6EOZ 58K 7.82609
91 6EOZ AKG 7.82609
92 2Z77 HE7 7.82609
93 4R38 RBF 7.82609
94 5Y4K AKR 7.82609
95 2Z6C FMN 7.82609
96 1LLF F23 7.82609
97 5ML3 DL3 8.69565
98 1UNB AKG 8.69565
99 1UNB PN1 8.69565
100 1QD1 FON 8.69565
101 3PQB VGP 8.69565
102 1VA6 P2S 8.69565
103 1VA6 ADP 8.69565
104 5DKK FMN 9.56522
105 3KV5 OGA 9.56522
106 4J8T DOG 9.56522
107 5KD6 6C7 9.56522
108 2GQS C2R 9.56522
109 1NVM OXL 9.56522
110 5MY8 RXZ 9.56522
111 2QL9 CIT 10.3093
112 1OLM VTQ 10.4348
113 3PUR 2HG 10.4348
114 5W10 CMP 10.4348
115 1VYF OLA 10.4348
116 4YZ5 SLT 10.4348
117 1Q8Y ADP 10.4348
118 3N9O OGA 10.4348
119 3N9P OGA 10.4348
120 3N9Q OGA 10.4348
121 1OGX EQU 11.3043
122 3V8S 0HD 11.3043
123 2V0U FMN 11.3043
124 4MNS 2AX 11.3043
125 3A06 NDP 11.3043
126 2PYW ADP 11.3043
127 1R5L VIV 12.1739
128 4WAS NAP 12.1739
129 4WAS COO 12.1739
130 3SSO SAH 13.0435
131 4AMW 5DI 13.0435
132 3RGA LSB 13.913
133 1MJJ HAL 13.913
134 4HKP TKW 13.913
135 4IJP 1EH 13.913
136 1YRX FMN 13.913
137 5DJT FMN 14.7541
138 2WKQ FMN 14.7826
139 1LRW PQQ 15.6522
140 4M1U A2G MBG 15.7143
141 4BXF AKG 15.7895
142 1XHL NDP 16.5217
143 1E3W NAD 17.3913
144 1E6W NAD 17.3913
145 2BOS GLA GAL 17.6471
146 2BOS GLA GAL GLC 17.6471
147 2R5V HHH 18.2609
148 5TSU CYS 19.1304
149 5JSP DQY 19.1304
150 1IND EOT 20
151 2HKA C3S 21.7391
152 1H2M OGA 23.4783
153 5IXG OTP 29.5652
Pocket No.: 2; Query (leader) PDB : 4JNJ; Ligand: BTN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 4jnj.bio5) has 16 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 4JNJ; Ligand: BTN; Similar sites found with APoc: 67
This union binding pocket(no: 3) in the query (biounit: 4jnj.bio5) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 3Q8G PEE None
2 3H9A PPY None
3 1M0U GSH None
4 5EW9 5VC 1.73913
5 4FE2 AIR 1.73913
6 2GC0 PAN 1.73913
7 5K8C NAD 2.6087
8 4GCZ FMN 3.47826
9 5IXH OTP 3.47826
10 1TQP ATP 3.47826
11 5LNW HG3 3.47826
12 3CQO FUC 3.47826
13 3MPI GRA 4.34783
14 4BVM VCA 4.34783
15 1LFO OLA 4.34783
16 5N87 N66 4.34783
17 3A7R LAQ 4.34783
18 1E8G FAD 4.34783
19 3WIR BGC 4.34783
20 4BVM PLM 4.34783
21 1LDN NAD 4.34783
22 4XCB AKG 4.34783
23 3C0G 3AM 5.21739
24 4Z87 GDP 5.21739
25 1ERB ETR 5.21739
26 3GAY P6T 5.21739
27 2OBF F83 6.08696
28 4L9I 8PR 6.08696
29 4FG8 ATP 6.08696
30 3W8X FTK 6.08696
31 3MVH WFE 6.08696
32 5FFF NAP 6.08696
33 5IH9 6BF 6.08696
34 2NP9 YE1 6.08696
35 1U7T NAD 6.95652
36 4J36 1HR 6.95652
37 5WO4 B7V 6.95652
38 5T2U NAP 6.95652
39 4KWI NAP 6.95652
40 4KWI 1TJ 6.95652
41 5U9J GER 6.95652
42 1ZB6 GST 7.82609
43 1ZB6 DIN 7.82609
44 4B7P 9UN 7.82609
45 5LI1 ANP 7.82609
46 6CI9 NAP 7.82609
47 2GOO NDG 7.84314
48 5UR1 YY9 8.69565
49 2YG2 S1P 9.56522
50 5KD6 LBU 9.56522
51 4FC7 NAP 10.4348
52 4FC7 COA 10.4348
53 1ZBQ NAD 10.4348
54 1Q8Y ADE 10.4348
55 3OJF NDP 11.3043
56 3OJF IMJ 11.3043
57 3SLS ANP 12.1739
58 5ESO ISC 12.1739
59 5ESO TDP 12.1739
60 3VZS CAA 12.1739
61 2RDQ AKG 13.0435
62 4LNU GDP 14.7826
63 1SU2 ATP 15.6522
64 2E9L BGC 19.1304
65 1H2K OGA 23.4783
66 2XUM OGA 23.4783
67 3P3N AKG 23.4783
Pocket No.: 4; Query (leader) PDB : 4JNJ; Ligand: BTN; Similar sites found with APoc: 37
This union binding pocket(no: 4) in the query (biounit: 4jnj.bio3) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 6GBV FMN None
2 2WCU FUC None
3 1LBF 137 None
4 4E5N NAD 1.73913
5 1R6U TYM 2.6087
6 4XU6 TDA 4.34783
7 4M0R 644 4.34783
8 4ZA8 4LU 4.34783
9 4ZA8 FZZ 4.34783
10 4ZA8 F5C 4.34783
11 1KOL NAD 5.21739
12 2OBF SAH 6.08696
13 2HGS ADP 6.08696
14 3W8X FAD 6.08696
15 4PNI KQQ 6.08696
16 3G08 FEE 6.95652
17 3PG7 PTY 6.95652
18 1NSZ GLC 6.95652
19 3RWP ABQ 7.82609
20 1GTE FMN 7.82609
21 1GTE IUR 7.82609
22 3HGM ATP 7.82609
23 1GQG DCD 7.82609
24 5Y9D FAD 8.69565
25 1VEM GLC GLC 8.69565
26 2FXD DR7 9.09091
27 2YG2 FLC 9.56522
28 4NW6 2NS 9.56522
29 1BGQ RDC 9.56522
30 3V1S 0LH 12.1739
31 5I7S E9P 13.913
32 5I7S NAD 13.913
33 3KV4 OGA 15.6522
34 4QXB OGA 17.3913
35 3E8T UQ8 17.3913
36 2WA4 069 23.4783
37 4C3Y ANB 24.3478
Pocket No.: 5; Query (leader) PDB : 4JNJ; Ligand: BTN; Similar sites found with APoc: 20
This union binding pocket(no: 5) in the query (biounit: 4jnj.bio1) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 4L3L 5FI 2.6087
2 2Z6D FMN 3.47826
3 5N6N SUC 3.47826
4 2ZJF BSU 3.47826
5 2VGD XYP XYP 4.34783
6 2AIB ERG 5.10204
7 4J7U YTZ 5.21739
8 4J7U NAP 5.21739
9 3WUR O4B 5.21739
10 5BVB DOG 5.21739
11 6C0T EE4 6.08696
12 5HWO HMG 6.08696
13 2ON5 GSH 6.08696
14 3EKK GS2 6.08696
15 1LRI CLR 6.12245
16 2R5T ANP 7.82609
17 4QM9 CYS 8.09249
18 2J8C U10 9.56522
19 3NUB UD0 10.4348
20 2CFC NAD 13.0435
Pocket No.: 6; Query (leader) PDB : 4JNJ; Ligand: BTN; Similar sites found with APoc: 2
This union binding pocket(no: 6) in the query (biounit: 4jnj.bio4) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 5GWT NAD 8.69565
2 3VZS NAP 12.1739
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