Receptor
PDB id Resolution Class Description Source Keywords
4LHV 1.95 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF RAB8 IN ITS INACTIVE GDP-BOUND FORM HOMO SAPIENS SMALL GTPASE PROTEIN TRANSPORT
Ref.: INTERMEDIATES IN THE GUANINE NUCLEOTIDE EXCHANGE RE RAB8 PROTEIN CATALYZED BY GUANINE NUCLEOTIDE EXCHAN FACTORS RABIN8 AND GRAB. J.BIOL.CHEM. V. 288 32466 2013
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MG B:202;
D:202;
E:202;
A:202;
C:202;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
GDP E:201;
D:201;
C:201;
A:201;
B:201;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4LHW 1.55 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF RAB8 IN ITS ACTIVE GPPNHP-BOUND FORM HOMO SAPIENS SMALL GTPASE PROTEIN TRANSPORT
Ref.: INTERMEDIATES IN THE GUANINE NUCLEOTIDE EXCHANGE RE RAB8 PROTEIN CATALYZED BY GUANINE NUCLEOTIDE EXCHAN FACTORS RABIN8 AND GRAB. J.BIOL.CHEM. V. 288 32466 2013
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (12)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 14 families.
1 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
9 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (246)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
19 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
27 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
36 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
40 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
41 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
45 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
47 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
49 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
57 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
61 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
78 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
81 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
84 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
85 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
87 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
88 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
91 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
92 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
93 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
94 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
97 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
99 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
101 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
102 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
104 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
109 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
112 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
114 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
118 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
124 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
126 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
127 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
130 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
133 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
134 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
135 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
138 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
140 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
145 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
150 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
151 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
152 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
153 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
154 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
155 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
156 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
157 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
158 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
163 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
164 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
165 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
168 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 1N6K - GDP AF3 n/a n/a
170 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
171 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
172 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
174 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
175 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
178 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
179 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
181 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
183 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
185 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
186 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
187 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
188 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
189 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
190 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
191 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
192 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
193 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
194 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
197 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
201 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
203 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
207 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
208 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
209 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
210 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
211 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
214 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
215 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
216 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
221 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
225 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
227 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
228 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
229 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
230 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
231 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
232 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
234 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
235 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
236 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
237 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
238 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
239 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
241 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
242 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
243 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
244 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
245 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 153
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 GNP 0.839506 0.973684
6 G 0.828947 0.986486
7 5GP 0.828947 0.986486
8 G1R 0.82716 0.986667
9 GCP 0.82716 0.973684
10 GSP 0.817073 0.948718
11 GAV 0.797619 0.961039
12 GMV 0.792683 0.973684
13 G2P 0.77381 0.961039
14 G2R 0.770115 0.961039
15 GDP MG 0.759036 0.923077
16 GP2 0.756098 0.961039
17 GDP BEF 0.75 0.9
18 GDD 0.747253 0.961039
19 GKE 0.747253 0.961039
20 GDC 0.747253 0.961039
21 GPG 0.741573 0.961039
22 G3D 0.732558 0.986486
23 ALF 5GP 0.729412 0.888889
24 Y9Z 0.728261 0.902439
25 GTP MG 0.724138 0.923077
26 BEF GDP 0.724138 0.888889
27 G5P 0.723404 0.973684
28 GFB 0.72043 0.961039
29 GTG 0.72043 0.936709
30 GDR 0.72043 0.961039
31 G4P 0.715909 0.986486
32 GCP G 0.715909 0.935065
33 6CK 0.712766 0.936709
34 G3A 0.712766 0.973684
35 GDP ALF 0.7 0.888889
36 GDP AF3 0.7 0.888889
37 YGP 0.698925 0.901235
38 JB2 0.697917 0.961039
39 GKD 0.697917 0.961039
40 GDX 0.690722 0.973684
41 GPD 0.690722 0.925
42 GMP 0.684211 0.88
43 0O2 0.666667 0.986486
44 G G 0.659574 0.935065
45 JB3 0.656863 0.948718
46 NGD 0.650485 0.961039
47 GDP 7MG 0.636364 0.911392
48 DGI 0.636364 0.923077
49 U2G 0.634615 0.936709
50 GPX 0.634409 0.946667
51 IDP 0.632184 0.972973
52 2MD 0.632075 0.891566
53 CAG 0.62963 0.880952
54 CG2 0.622642 0.936709
55 FEG 0.619048 0.879518
56 MGD 0.614679 0.891566
57 ZGP 0.613208 0.869048
58 GH3 0.612903 0.973333
59 3GP 0.611765 0.946667
60 MD1 0.607143 0.891566
61 PGD 0.59292 0.925
62 DGT 0.591398 0.923077
63 BGO 0.588785 0.924051
64 TPG 0.582609 0.840909
65 DBG 0.582609 0.948718
66 2GP 0.574713 0.96
67 FE9 0.570175 0.776596
68 I2C FE2 CMO CMO 0.566372 0.808989
69 G A A A 0.553571 0.923077
70 MGP 0.553191 0.961039
71 U A G G 0.548673 0.935065
72 G4M 0.548387 0.880952
73 6G0 0.547368 0.961039
74 G1R G1R 0.542373 0.924051
75 P2G 0.527473 0.883117
76 PGD O 0.525 0.850575
77 ADP 0.522222 0.92
78 GGM 0.517544 0.901235
79 DG 0.516484 0.910256
80 DGP 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G G U 0.509259 0.935065
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 G C 0.504348 0.9
86 GPC 0.491525 0.879518
87 G7M 0.483871 0.948052
88 6AD 0.479592 0.841463
89 ATP 0.473684 0.92
90 G2Q 0.471154 0.961039
91 U G A 0.469697 0.888889
92 5FA 0.46875 0.92
93 AQP 0.46875 0.92
94 GTA 0.468468 0.936709
95 7DD 0.468085 0.906667
96 G G G RPC 0.466102 0.875
97 SGP 0.463158 0.82716
98 01G 0.462963 0.902439
99 B4P 0.457447 0.894737
100 AP5 0.457447 0.894737
101 A2D 0.456522 0.894737
102 G G G C 0.455285 0.9125
103 ACQ 0.454545 0.896104
104 5GP 5GP 0.454545 0.883117
105 ANP 0.454545 0.896104
106 A G C C 0.451613 0.911392
107 APC G U 0.45082 0.886076
108 G U34 0.449153 0.888889
109 DG DG 0.448598 0.865854
110 ITT 0.447917 0.868421
111 BA3 0.446809 0.894737
112 35G 0.444444 0.933333
113 C2E 0.444444 0.921053
114 PCG 0.444444 0.933333
115 MGO 0.441176 0.864198
116 AN2 0.4375 0.907895
117 G C C C 0.4375 0.924051
118 M33 0.43299 0.883117
119 UCG 0.429688 0.911392
120 A G U 0.42963 0.888889
121 ACP 0.428571 0.896104
122 MGQ 0.424528 0.935897
123 7DT 0.424242 0.906667
124 APR 0.424242 0.894737
125 AR6 0.424242 0.894737
126 93A 0.42268 0.833333
127 A4P 0.420168 0.869048
128 SAP 0.42 0.873418
129 AD9 0.42 0.896104
130 AGS 0.42 0.873418
131 G8D 0.42 0.875
132 CA0 0.418367 0.896104
133 ATF 0.417476 0.884615
134 AGO 0.414634 0.888889
135 NIA 0.413043 0.82716
136 MGV 0.412844 0.890244
137 TAT 0.411765 0.884615
138 A1R 0.411215 0.839506
139 ADQ 0.411215 0.871795
140 RGT 0.410714 0.909091
141 CGP 0.409836 0.86747
142 AMP 0.408602 0.893333
143 A 0.408602 0.893333
144 UP5 0.40678 0.873418
145 C2R 0.406593 0.906667
146 AMZ 0.406593 0.918919
147 JBT 0.405882 0.778947
148 A22 0.40566 0.907895
149 25L 0.405405 0.907895
150 ADX 0.40404 0.809524
151 8OD 0.401961 0.946667
152 4TC 0.4 0.851852
153 50T 0.4 0.883117
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4LHW; Ligand: GNP; Similar sites found: 313
This union binding pocket(no: 1) in the query (biounit: 4lhw.bio1) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2GJ8 ALF GDP 0.00000000217 0.65704 None
2 1GXU 2HP 0.0001934 0.502 None
3 3BER AMP 0.003807 0.44103 None
4 1W5T ANP 0.001414 0.40443 None
5 1I1N SAH 0.005892 0.40106 None
6 1M7G ADX 0.0008247 0.43884 1.72414
7 3UIE ANP 0.00002535 0.4355 1.72414
8 1M7G ADP 0.001049 0.43156 1.72414
9 1M7G AV2 0.000007226 0.42918 1.72414
10 1G7S GDP 0.00000000711 0.71277 2.29885
11 2BVN GNP 0.0000000005259 0.60528 2.29885
12 2HCJ GDP 0.0000000003384 0.55383 2.29885
13 1D8T GDP 0.00000000108 0.55285 2.29885
14 1D2E GDP 0.00000002765 0.54497 2.29885
15 1ION ADP 0.0001356 0.41648 2.29885
16 1G8S MET 0.03589 0.40273 2.29885
17 1SVI GDP 0.0000000000854 0.56917 2.87356
18 5M04 GDP 0.000000002643 0.53636 2.87356
19 4GOX A3P 0.001637 0.41027 2.87356
20 4O48 ASP 0.02885 0.40669 2.87356
21 4AG5 ADP 0.00000501 0.60896 3.44828
22 1YTM ATP 0.0003439 0.46208 3.44828
23 3E70 GDP 0.000004223 0.46036 3.44828
24 1FP6 ADP 0.00004089 0.43835 3.44828
25 2Y65 ADP 0.000001307 0.41732 3.44828
26 4YS0 ADP 0.0005469 0.40912 3.44828
27 1TQ4 GDP 0.00000001095 0.65655 4.02299
28 5FG3 GDP 0.0000000001919 0.56147 4.02299
29 1G6O ADP 0.000146 0.49889 4.02299
30 4IDN GNP 0.0000599 0.45969 4.02299
31 3DC4 ADP 0.00000035 0.45233 4.02299
32 1F9V ADP 0.0000009571 0.43252 4.02299
33 3QXC ATP 0.001388 0.42346 4.02299
34 1IN4 ADP 0.0003146 0.41926 4.02299
35 3DKP ADP 0.0001254 0.40205 4.02299
36 2IYL GDP 0.000004304 0.45532 4.57746
37 2HF9 GSP 0.0000001017 0.63035 4.5977
38 3A1S GDP 0.00000001247 0.54318 4.5977
39 4IEE AGS 0.0005883 0.48703 4.5977
40 1DAK DPU 0.0002153 0.47642 4.5977
41 3KJI ADP 0.00002884 0.44737 4.5977
42 2C9O ADP 0.0002139 0.43229 4.5977
43 1DAK ADP 0.01439 0.42501 4.5977
44 3P4X ADP 0.00001762 0.41886 4.5977
45 1K6M AGS 0.001281 0.41358 4.5977
46 1T5C ADP 0.000001165 0.40577 4.5977
47 1SVM ATP 0.01457 0.40265 4.5977
48 1YRB GDP 0.0000000002469 0.61072 5.17241
49 1JI0 ATP 0.00002679 0.5631 5.17241
50 1KK1 GNP 0.0000000133 0.51966 5.17241
51 1DAR GDP 0.000000064 0.51271 5.17241
52 1H65 GDP 0.000004964 0.50048 5.17241
53 3DEF GDP 0.000001357 0.49149 5.17241
54 1KK8 BEF ADP 0.000001864 0.48955 5.17241
55 2Q2Y ADP 0.0003402 0.46556 5.17241
56 1QF5 GDP 0.0006504 0.4632 5.17241
57 2Q2Y MKR 0.0003646 0.46305 5.17241
58 1B7T ADP 0.00000841 0.45289 5.17241
59 2VVG ADP 0.00000009158 0.43003 5.17241
60 1QF5 RPL 0.01827 0.42608 5.17241
61 2FAH GDP 0.0001476 0.42606 5.17241
62 2IXE ATP 0.0005606 0.42232 5.17241
63 2RGX AP5 0.004178 0.42147 5.17241
64 1ZIN AP5 0.004379 0.41854 5.17241
65 1CR1 TTP 0.0005439 0.41738 5.17241
66 1SQ5 ADP 0.00007335 0.41676 5.17241
67 4X8O AP5 0.006635 0.41573 5.17241
68 4BFW ZVW 0.00871 0.40585 5.17241
69 4FCW ADP 0.0002634 0.40344 5.17241
70 1UKZ ADP 0.008044 0.40068 5.17241
71 1XEX ATP 0.004829 0.4001 5.17241
72 2FH5 GTP 0.000000000001903 0.72682 5.74713
73 3WXM GTP 0.0000000007477 0.67263 5.74713
74 2WIC GNP 0.00000006442 0.66661 5.74713
75 2RCN GDP 0.00000000002386 0.60131 5.74713
76 1W7J ADP BEF 0.0000009767 0.58606 5.74713
77 4ZG4 VO4 ADP 0.0000005959 0.5421 5.74713
78 5I0H ADP BEF 0.0000003993 0.53316 5.74713
79 3MD0 GDP 0.000000002411 0.53272 5.74713
80 4R43 GDP 0.0001333 0.51298 5.74713
81 1JWY GDP 0.000001311 0.49756 5.74713
82 2B8W ALF 5GP 0.0000151 0.49486 5.74713
83 1G7C 5GP 0.0000004377 0.48672 5.74713
84 4R98 GNH 0.000001136 0.478 5.74713
85 4PFO ADP 0.00007939 0.47153 5.74713
86 5L3V GDP 0.000004447 0.46585 5.74713
87 1JWY ADP 0.000003388 0.45683 5.74713
88 1IHU ADP 0.0001003 0.45632 5.74713
89 1IHU AF3 0.00008109 0.45385 5.74713
90 2BEK ATP 0.0008494 0.44634 5.74713
91 3IIJ ADP 0.000008408 0.43338 5.74713
92 4U60 SIA GAL NGA 0.008007 0.42735 5.74713
93 5TSH ANP 0.00001332 0.42679 5.74713
94 1OS1 PYR 0.001741 0.42409 5.74713
95 1OS1 ATP 0.001694 0.42309 5.74713
96 5H56 TYD 0.001961 0.42198 5.74713
97 5H56 ADP 0.001961 0.42198 5.74713
98 4U60 SIA 0.01183 0.42103 5.74713
99 3DZD ADP 0.0002016 0.42033 5.74713
100 3FB4 AP5 0.00428 0.41896 5.74713
101 2QQ0 ANP 0.004554 0.40967 5.74713
102 5TSH ADP 0.00001087 0.40958 5.74713
103 2QQ0 TMP 0.005388 0.40665 5.74713
104 2W58 ADP 0.0000005739 0.40487 5.74713
105 2VF7 ADP 0.0001476 0.40176 5.74713
106 4WOP CTP 0.0000459 0.45867 6.22222
107 4NCN GTP 0.00000000006619 0.69349 6.32184
108 1AZT GSP 0.000000002806 0.65805 6.32184
109 1SVK ALF GDP 0.000000005022 0.65033 6.32184
110 1BH2 GSP 0.00000000455 0.64952 6.32184
111 1TAD ALF 0.000000005276 0.64691 6.32184
112 1TAD GDP 0.000000005276 0.64691 6.32184
113 4NON GDP 0.00000009853 0.59285 6.32184
114 1FQJ GDP 0.00000009202 0.57582 6.32184
115 1FQK GDP 0.0000002189 0.5618 6.32184
116 2DPY ADP 0.00003253 0.55871 6.32184
117 1Y3A GDP 0.0000002747 0.55814 6.32184
118 3PQC GDP 0.000000006061 0.55455 6.32184
119 3EC1 GDP 0.000000004393 0.5516 6.32184
120 2XTN GTP 0.0000003595 0.55141 6.32184
121 2OM2 GDP 0.000003888 0.54627 6.32184
122 3ZFD ANP 0.00000001817 0.54081 6.32184
123 1GP2 GDP 0.000004811 0.5308 6.32184
124 5KDO GDP 0.000004363 0.49992 6.32184
125 5L3S GNP 0.0000164 0.49326 6.32184
126 2WOJ ADP ALF 0.00004605 0.48298 6.32184
127 5L3W GDP 0.000007713 0.45978 6.32184
128 2QEN ADP 0.00008315 0.43512 6.32184
129 3FVQ ATP 0.0002139 0.43176 6.32184
130 3QKT ANP 0.0006656 0.42962 6.32184
131 1FQJ ALF 0.000004907 0.42664 6.32184
132 5X40 ACP 0.0008032 0.42117 6.32184
133 1NY5 ADP 0.0002563 0.41889 6.32184
134 4MKF AP5 0.004583 0.41874 6.32184
135 2ZPA ADP 0.0003294 0.41799 6.32184
136 2CHG ANP 0.0002877 0.41703 6.32184
137 3BFV ADP 0.00004504 0.41662 6.32184
138 1FQK ALF 0.000006653 0.41008 6.32184
139 4PX9 ADP 0.00003884 0.40706 6.50685
140 1WF3 GNP 0.000000007205 0.63608 6.89655
141 4HI0 GDP 0.000001243 0.56769 6.89655
142 4P4T GDP 0.000001331 0.50929 6.89655
143 1W0J ADP 0.00009375 0.42826 6.89655
144 4HSE ADP 0.00003367 0.4235 6.89655
145 1W0J ADP BEF 0.0003023 0.42249 6.89655
146 1G3Q ADP 0.00006917 0.42046 6.89655
147 1R6B ADP 0.00009294 0.41552 6.89655
148 4YMU ATP 0.00002347 0.409 6.89655
149 1NRJ GTP 0.000000001069 0.63081 6.96203
150 2WJH GDP 0.00000001591 0.54472 7.22892
151 2WJH FLC 0.000001373 0.48506 7.22892
152 1GOJ ADP 0.00000007921 0.71967 7.47126
153 3CX8 GSP 0.000000002568 0.65961 7.47126
154 3B9Q MLI 0.00004139 0.55279 7.47126
155 3TK1 GDP 0.0000000003002 0.54095 7.47126
156 1SKQ GDP 0.00000002044 0.51383 7.47126
157 1FNN ADP 0.0001676 0.43013 7.47126
158 1X6V ADP 0.001365 0.42691 7.47126
159 2XAU ADP 0.0002184 0.40656 7.47126
160 2ODE ALF GDP 0.000000002611 0.65932 7.80142
161 2XTZ GSP 0.0000000003354 0.68656 8.04598
162 4DCT GDP 0.0000000002988 0.58013 8.04598
163 5HCN GCP 0.000000000564 0.57884 8.04598
164 5CK5 GDP 0.0000000003795 0.55884 8.04598
165 5N69 ADP 0.000003983 0.46976 8.04598
166 1E2K TMC 0.0009385 0.44689 8.04598
167 2OFW ADX 0.001413 0.43822 8.04598
168 2PEZ DAT 0.001518 0.42935 8.04598
169 2PEZ GGZ 0.001518 0.42935 8.04598
170 4MKG AP5 0.004611 0.41758 8.04598
171 1KO8 6PG 0.0003745 0.41601 8.04598
172 5GJC ATP 0.00005414 0.41144 8.04598
173 3NHB ADP 0.00000687 0.40631 8.04598
174 1WY7 SAH 0.002835 0.40282 8.04598
175 2WJG GDP 0.00000002665 0.69574 8.62069
176 3ZQ6 ADP ALF 0.00004218 0.48451 8.62069
177 4XVU ATP 0.00008029 0.46115 8.62069
178 3COB ADP 0.0000002156 0.43583 8.62069
179 1S3G AP5 0.004559 0.41779 8.62069
180 4KFU ACP 0.00001749 0.40277 8.62069
181 1PUJ GNP 0.00000001505 0.55882 9.1954
182 4WZA ACP 0.00005367 0.51937 9.1954
183 4WZA ADP 0.00005367 0.51937 9.1954
184 5L3R GCP 0.000003699 0.51867 9.1954
185 2BIF SIN 0.003505 0.42574 9.1954
186 2BIF ANP 0.002001 0.42574 9.1954
187 4NE2 SH2 0.004088 0.41648 9.1954
188 4NE2 ADP 0.003692 0.41596 9.1954
189 4QOS ADP 0.0002015 0.40608 9.1954
190 1F2U ATP 0.00113 0.42706 9.45946
191 4IOK ADP 0.001548 0.42314 9.77011
192 4IOK XPO 0.001307 0.41892 9.77011
193 2CE7 ADP 0.00009026 0.41749 9.77011
194 1BG2 ADP 0.0000003938 0.41618 9.77011
195 1NHX FTB 0.006599 0.4149 9.77011
196 1NHX PEP 0.006745 0.41355 9.77011
197 2GMV UN8 0.004707 0.40359 9.77011
198 1UJ2 ADP 0.004432 0.40315 9.77011
199 1D2N ANP 0.001562 0.40215 9.77011
200 2NCD ADP 0.000001631 0.6339 10.3448
201 5KUT GDP 0.000000001208 0.56527 10.3448
202 3AB3 GDP 0.000000122 0.55673 10.3448
203 3FWY ADP 0.00001355 0.46314 10.3448
204 4Q1A 2XZ 0.008838 0.45191 10.3448
205 4Q1A UDP 0.008838 0.45191 10.3448
206 1P72 ADP 0.000849 0.43976 10.3448
207 3H86 AP5 0.001206 0.43617 10.3448
208 2XT3 ADP 0.000000269 0.43183 10.3448
209 2QZ4 ADP 0.00004572 0.42854 10.3448
210 1OXV ANP 0.00002382 0.40806 10.3448
211 3B7G ANP 0.000188 0.40616 10.3448
212 2VB6 ADP BEF 0.000008729 0.49647 10.7383
213 1F5N GNP 0.00001505 0.49255 10.9195
214 5HR5 ADP 0.0004145 0.4087 10.9195
215 4QM7 GTP 0.00003107 0.41562 11.1111
216 2C78 GNP 0.0000000006005 0.64783 11.4943
217 2C77 GNP 0.0000000008395 0.63324 11.4943
218 1L2T ATP 0.0006854 0.42903 11.4943
219 4D81 ADP 0.00009347 0.42519 11.4943
220 1CS4 GSP 0.000000005099 0.61834 12.069
221 4LPS GDP 0.0000001675 0.50388 12.069
222 1LVG ADP 0.000001025 0.43949 12.069
223 3R7F CP 0.03281 0.40427 12.069
224 3FYH ADP 0.00305 0.40325 12.069
225 1Z6T ADP 0.0001562 0.42307 12.6437
226 5LB3 ADP 0.00006512 0.4068 12.6437
227 3ZIA ADP 0.0001339 0.42193 12.6984
228 3ZIA ATP 0.00006334 0.42075 12.6984
229 4OI4 ATP 0.001285 0.4136 13.0435
230 4LC1 GDP 0.000000002313 0.74818 13.2184
231 4RD0 GDP 0.0000000001165 0.67377 13.2184
232 2QN6 GDP 0.0000000008138 0.54695 13.2184
233 1OFH ADP 0.0001347 0.4161 13.2184
234 1ME8 RVP 0.01042 0.40047 13.2184
235 1G41 ADP 0.00007227 0.4236 13.7931
236 3QF7 ANP 0.0009357 0.40263 14
237 5BQ5 ADP BEF 0.00008925 0.42139 14.3678
238 3RLF ANP 0.00022 0.44281 14.9425
239 2AWN ADP 0.00000009807 0.40697 14.9425
240 2KIN ADP 0.0000003274 0.41731 16
241 3H4S ADP 0.0000003914 0.42872 16.092
242 4FRZ ADP 0.000001455 0.42772 16.092
243 4XTR ATP 0.00008022 0.46106 16.2162
244 4XTR ADP 0.0001058 0.44023 16.2162
245 4CVN ADP 0.000007944 0.41715 16.7539
246 1XKV ATP 0.0001048 0.41783 17.2414
247 2CK3 ADP 0.0004528 0.43157 18
248 2V7Q ATP 0.00005643 0.42676 18
249 2CK3 ANP 0.0002945 0.42319 18
250 2V7Q ADP 0.00005783 0.415 18
251 1NN5 ANP 0.006063 0.40325 18.3908
252 1P9B GDP 0.0002169 0.42644 18.9655
253 4BQS ADP 0.00006247 0.52925 19.5402
254 4H1V GNP 0.000001913 0.49668 19.5402
255 1V8K ANP 0.0000002007 0.48947 19.5402
256 4BQS K2Q 0.003022 0.4208 19.5402
257 4B47 GDP 0.0000000002954 0.55999 20.1149
258 3VX3 ADP 0.0000753 0.44444 20.1149
259 1ZUI SKM 0.001015 0.4406 20.2381
260 2ZFI ADP 0.000001392 0.61087 20.6897
261 1IWE IMP 0.001112 0.48066 21.8391
262 5I34 GDP 0.00007021 0.42412 21.8391
263 3T12 GDP ALF 0.00000002711 0.58831 22.4138
264 1YZG GDP 0.00000001032 0.54204 22.4138
265 5KSP GDP 0.00000004103 0.52283 22.4138
266 5KSZ GCP 0.0000001172 0.52183 22.4138
267 3T1O GDP 0.0000006686 0.49928 22.4138
268 2JLR ANP 0.0001639 0.4174 24.1379
269 3W5J GDP 0.000003766 0.4176 24.7126
270 4M9Q GNP 0.0000000001122 0.67538 25.8621
271 4BAS GNP 0.000000009938 0.6029 27.0115
272 2C04 GCP 0.00009905 0.49561 27.5862
273 1RJ9 GCP 0.0001156 0.48914 27.5862
274 1NJF AGS 0.0001568 0.44433 29.8851
275 1NJF ADP 0.0001032 0.43809 29.8851
276 1M2O GNP 0.000000001952 0.65596 31.0345
277 1GOT GDP 0.000001539 0.52282 31.5068
278 2QTV GNP 0.000000002296 0.64472 32.3353
279 4V0K GDP 0.0000006295 0.54816 33.1361
280 1ZD9 GDP 0.00000000002351 0.78285 33.3333
281 1ZJ6 G3D 0.000000008196 0.54516 33.908
282 3A4M ADP 0.000005241 0.42138 33.908
283 1KSH GDP 0.00000000003686 0.67938 34.4828
284 2A5F GTP 0.000000002616 0.6426 36.7816
285 1MR3 G3D 0.000000002908 0.55668 37.3563
286 1J2J GTP 0.0000000001483 0.71829 38.5542
287 1O3Y GTP 0.000000000517 0.66093 38.5542
288 2ZEJ GDP 0.0000004878 0.56243 39.0805
289 1F6B GDP 0.0000000423 0.5244 39.0805
290 1S9D GDP 0.00000001952 0.69162 39.6341
291 1RE0 GDP 0.000000002209 0.53673 39.6341
292 3ZS9 ADP ALF 0.00004085 0.48507 42.1053
293 1FZQ GDP 0.0000000007036 0.56057 42.5414
294 1UPT GTP 0.0000000001793 0.66764 44.4444
295 1R4A GNP 0.0000000001197 0.69469 44.8485
296 1E96 GTP 0.0000000000004343 0.80211 47.1264
297 3REF GDP 0.000000001018 0.63889 47.1264
298 2FJU GSP 0.000000000005306 0.71227 47.7011
299 1HE1 GDP 0.0000000008344 0.7049 47.7011
300 3T5G GDP 0.0000000000235 0.62992 47.7011
301 1I4D GDP 0.00000000000849 0.59652 47.7011
302 1G4U GDP 0.000000005086 0.58993 47.7011
303 1HE1 AF3 0.00001007 0.58518 47.7011
304 1MKY GDP 0.0000000002304 0.5714 47.7011
305 2W2X GSP 0.000000000007395 0.70767 48.2759
306 1NF3 GNP 0.000000000008586 0.75025 48.8506
307 1DS6 GDP 0.00000000001852 0.60145 48.8506
308 1GRN GDP 0.00000000001023 0.67236 49.4253
309 2NGR GDP 0.000000000005109 0.63714 49.4253
310 4ITR GDP 0.000000003969 0.59394 49.4253
311 4DID GDP 0.0000000001779 0.59045 49.4253
312 2NGR AF3 0.00000002792 0.48901 49.4253
313 1GRN AF3 0.0000001988 0.46343 49.4253
314 3M1I GTP 0.00000000000005806 0.84098 50
315 3GJ8 GDP 0.0000000002176 0.78581 50
316 3GJ4 GDP 0.00000000007194 0.58948 50
317 3GJ7 GDP 0.000000000071 0.58883 50
318 3GJ5 GDP 0.0000000002254 0.58797 50
Pocket No.: 2; Query (leader) PDB : 4LHW; Ligand: GNP; Similar sites found: 7
This union binding pocket(no: 2) in the query (biounit: 4lhw.bio3) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1QF9 C5P 0.009251 0.40158 1.72414
2 1QF9 ALF 0.009251 0.40158 1.72414
3 1QF9 ADP 0.009251 0.40158 1.72414
4 5JAQ NAI 0.008633 0.40701 4.02299
5 3KTA AP5 0.001276 0.40294 5.17241
6 1UJ2 C5P 0.00435 0.40347 9.77011
7 4TTQ ATP 0.0001396 0.4043 13.2184
Pocket No.: 3; Query (leader) PDB : 4LHW; Ligand: GNP; Similar sites found: 10
This union binding pocket(no: 3) in the query (biounit: 4lhw.bio2) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2Z9I GLY ALA THR VAL 0.02485 0.40759 None
2 2Q37 3AL 0.0194 0.41524 1.14943
3 1GET NAP 0.02606 0.40488 2.87356
4 1GET FAD 0.02462 0.40488 2.87356
5 4UOX PUT 0.0123 0.40444 3.44828
6 3BFX A3P 0.001553 0.40019 4.5977
7 4MDB RLT 0.01543 0.42623 5.17241
8 1QAN SAH 0.0006894 0.42599 5.17241
9 3QOX SAH 0.003697 0.40166 10.3448
10 4QRH 0O2 0.00141 0.40011 12.6437
Pocket No.: 4; Query (leader) PDB : 4LHW; Ligand: GNP; Similar sites found: 17
This union binding pocket(no: 4) in the query (biounit: 4lhw.bio5) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2PL3 ADP 0.0001189 0.40271 None
2 1XMV ADP 0.0002113 0.40506 2.29885
3 4P32 ADP 0.002298 0.4038 5.17241
4 1JJ7 ADP 0.000001838 0.40161 5.17241
5 1YQT ADP 0.00001953 0.40043 5.17241
6 1B0U ATP 0.0004321 0.40591 6.32184
7 1G6H ADP 0.000002087 0.40041 6.32184
8 4U00 ADP 0.00000135 0.40508 7.47126
9 3B5J 12D 0.00003877 0.40559 8.04598
10 4WZ6 ATP 0.00002101 0.40225 8.04598
11 1W4R TTP 0.00718 0.40032 8.04598
12 2IS6 ADP 0.0001222 0.40432 8.62069
13 2QG6 NMN 0.005531 0.4036 9.1954
14 2GMV PEP 0.005981 0.40499 9.77011
15 3TMK T5A 0.00615 0.40311 9.77011
16 2ZR9 DTP 0.0001468 0.40271 13.2184
17 4GBM A3P 0.002135 0.41135 17.2414
Pocket No.: 5; Query (leader) PDB : 4LHW; Ligand: GNP; Similar sites found: 2
This union binding pocket(no: 5) in the query (biounit: 4lhw.bio4) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4LNP VAL PRO PRO PRO ARG PRO PRO PRO PRO GLU 0.02687 0.40268 None
2 3GUZ PAF 0.02425 0.40684 5.74713
Feedback