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Receptor
PDB id Resolution Class Description Source Keywords
4N69 1.8 Å EC: 2.3.1.30 SOYBEAN SERINE ACETYLTRANSFERASE COMPLEXED WITH SERINE GLYCINE MAX ACETYLTRANSFERASE TRANSFERASE
Ref.: STRUCTURE OF SOYBEAN SERINE ACETYLTRANSFERASE AND F OF THE CYSTEINE REGULATORY COMPLEX AS A MOLECULAR C J.BIOL.CHEM. V. 288 36463 2013
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SER A:301;
B:501;
Valid;
Valid;
none;
none;
submit data
105.093 C3 H7 N O3 C([C@...
PO4 A:302;
B:502;
Invalid;
Invalid;
none;
none;
submit data
94.971 O4 P [O-]P...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4N69 1.8 Å EC: 2.3.1.30 SOYBEAN SERINE ACETYLTRANSFERASE COMPLEXED WITH SERINE GLYCINE MAX ACETYLTRANSFERASE TRANSFERASE
Ref.: STRUCTURE OF SOYBEAN SERINE ACETYLTRANSFERASE AND F OF THE CYSTEINE REGULATORY COMPLEX AS A MOLECULAR C J.BIOL.CHEM. V. 288 36463 2013
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 4N69 - SER C3 H7 N O3 C([C@@H](C....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 4N69 - SER C3 H7 N O3 C([C@@H](C....
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1SST - COA C21 H36 N7 O16 P3 S CC(C)(CO[P....
2 1SSQ Ki = 1 uM CYS C3 H7 N O2 S C([C@@H](C....
3 4N69 - SER C3 H7 N O3 C([C@@H](C....
4 1T3D - CYS C3 H7 N O2 S C([C@@H](C....
5 4HZD - COA C21 H36 N7 O16 P3 S CC(C)(CO[P....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SER; Similar ligands found: 33
No: Ligand ECFP6 Tc MDL keys Tc
1 DSN 1 1
2 SER 1 1
3 CYS 0.65 0.84
4 DCY 0.65 0.84
5 ABA 0.6 0.692308
6 2RA 0.6 0.75
7 DBB 0.6 0.692308
8 HSE 0.590909 0.821429
9 C2N 0.571429 0.730769
10 ASP 0.545455 0.714286
11 ASN 0.545455 0.625
12 DAS 0.545455 0.714286
13 DAB 0.521739 0.724138
14 HL5 0.518519 0.814815
15 CSO 0.5 0.636364
16 LEU 0.5 0.642857
17 API 0.5 0.633333
18 HCS 0.5 0.777778
19 NVA 0.5 0.62069
20 AS2 0.5 0.703704
21 CSS 0.48 0.689655
22 DGY 0.47619 0.607143
23 GGL 0.461538 0.655172
24 DGL 0.461538 0.655172
25 GLU 0.461538 0.655172
26 ORN 0.444444 0.689655
27 SLZ 0.433333 0.625
28 11C 0.413793 0.633333
29 UN1 0.413793 0.633333
30 DLY 0.413793 0.666667
31 CME 0.40625 0.666667
32 LYS 0.4 0.645161
33 DHH 0.4 0.612903
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4N69; Ligand: SER; Similar sites found with APoc: 3
This union binding pocket(no: 1) in the query (biounit: 4n69.bio2) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 1P0F NAP 4.8951
2 1ON3 MCA 5.59441
3 4B9Q ATP 15.035
Pocket No.: 2; Query (leader) PDB : 4N69; Ligand: SER; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 4n69.bio2) has 8 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 4N69; Ligand: SER; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 4n69.bio2) has 8 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 4N69; Ligand: SER; Similar sites found with APoc: 1
This union binding pocket(no: 4) in the query (biounit: 4n69.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 1VEM GLC GLC 1.3986
Pocket No.: 5; Query (leader) PDB : 4N69; Ligand: SER; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 4n69.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 4N69; Ligand: SER; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 4n69.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
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