Receptor
PDB id Resolution Class Description Source Keywords
4RDL 1.45 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF NOROVIRUS BOXER P DOMAIN IN COMPLEX WIT TETRASACCHARIDE HUMAN CALICIVIRUS NLV/BOXER/2001/US MIXED ALPHA/BETA STRUCTURE RECEPTOR BINDING HBGA VIRUS CAVIRAL PROTEIN
Ref.: CRYSTAL STRUCTURES OF GI.8 BOXER VIRUS P DIMERS IN WITH HBGAS, A NOVEL EVOLUTIONARY PATH SELECTED BY T EPITOPE PROTEIN CELL 2014
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
FUC GAL NDG FUC B:601;
A:601;
Valid;
Valid;
none;
none;
submit data
675.634 n/a O=C(N...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4RDL 1.45 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF NOROVIRUS BOXER P DOMAIN IN COMPLEX WIT TETRASACCHARIDE HUMAN CALICIVIRUS NLV/BOXER/2001/US MIXED ALPHA/BETA STRUCTURE RECEPTOR BINDING HBGA VIRUS CAVIRAL PROTEIN
Ref.: CRYSTAL STRUCTURES OF GI.8 BOXER VIRUS P DIMERS IN WITH HBGAS, A NOVEL EVOLUTIONARY PATH SELECTED BY T EPITOPE PROTEIN CELL 2014
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 4RDL - FUC GAL NDG FUC n/a n/a
2 4RDK - FUC NDG GAL FUC n/a n/a
70% Homology Family (11)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 4RDL - FUC GAL NDG FUC n/a n/a
2 4RDK - FUC NDG GAL FUC n/a n/a
3 5N7M - GLC GAL FUC n/a n/a
4 2ZL6 - FUC GAL NAG GAL BGC n/a n/a
5 2ZL7 - FUC GAL NGA n/a n/a
6 3D26 - NGA GAL FUC n/a n/a
7 4P25 - FUC GAL NAG FUC n/a n/a
8 4P3I - GAL NAG FUC n/a n/a
9 4P2N - GAL NAG FUC n/a n/a
10 4P26 - A2G GAL NAG FUC n/a n/a
11 4P1V - FUC GAL NAG n/a n/a
50% Homology Family (49)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 4OPS - FUC GAL NAG FUC n/a n/a
2 4OPO - FUC NAG GAL FUC n/a n/a
3 4WZL - FUC NDG GAL n/a n/a
4 4X06 - FUC GLA GLA n/a n/a
5 4WZE - FUC NDG GAL FUC n/a n/a
6 4OP7 - FUC GLA GLA n/a n/a
7 4X05 - FUC GLA GLA n/a n/a
8 4WZT - FUC GLA A2G n/a n/a
9 4X0C - FUC NDG GAL n/a n/a
10 4WZK - FUC GAL NDG n/a n/a
11 4X07 - FUC GLA A2G n/a n/a
12 5LKC ic50 = 13 mM FUC GLA A2G n/a n/a
13 5LKG - FUC GAL GLC n/a n/a
14 4Z4W - FUL C6 H12 O5 C[C@H]1[C@....
15 4Z4Z - FUC GLA GLA n/a n/a
16 3ONY - FUC C6 H12 O5 C[C@H]1[C@....
17 3Q3A - FUL GAL NAG n/a n/a
18 4Z4T - FUL C6 H12 O5 C[C@H]1[C@....
19 4Z4V - FUL C6 H12 O5 C[C@H]1[C@....
20 4Z4Y - FUC GLA GLA n/a n/a
21 5BSY - FLC C6 H5 O7 C(C(=O)[O-....
22 5HZB ic50 = 5.5 mM GLC GAL FUC n/a n/a
23 3PA2 - FUC GAL NAG FUC n/a n/a
24 4Z4S - FUL C6 H12 O5 C[C@H]1[C@....
25 3Q38 - FUC GAL GLA n/a n/a
26 3RY8 Kd = 460 uM FLC C6 H5 O7 C(C(=O)[O-....
27 3PA1 - FUC GAL A2G n/a n/a
28 4Z4U - FUL C6 H12 O5 C[C@H]1[C@....
29 3Q39 - FUC GAL n/a n/a
30 5HZA ic50 = 5.6 mM FUC BGC GAL n/a n/a
31 5BSX - FLC C6 H5 O7 C(C(=O)[O-....
32 4Z4R - FUL C6 H12 O5 C[C@H]1[C@....
33 4RM0 - FUC NAG GAL n/a n/a
34 3PUN - FUC GAL NDG FUC n/a n/a
35 3PVD - SIA GAL NDG FUC n/a n/a
36 4RDL - FUC GAL NDG FUC n/a n/a
37 4RDK - FUC NDG GAL FUC n/a n/a
38 3R6K - FUC GAL GLA n/a n/a
39 5N7M - GLC GAL FUC n/a n/a
40 2ZL6 - FUC GAL NAG GAL BGC n/a n/a
41 2ZL7 - FUC GAL NGA n/a n/a
42 3D26 - NGA GAL FUC n/a n/a
43 4P25 - FUC GAL NAG FUC n/a n/a
44 4P3I - GAL NAG FUC n/a n/a
45 4P2N - GAL NAG FUC n/a n/a
46 4P26 - A2G GAL NAG FUC n/a n/a
47 4P1V - FUC GAL NAG n/a n/a
48 2OBS - FUC GL0 A2G n/a n/a
49 2OBT - FUC GAL GLA n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: FUC GAL NDG FUC; Similar ligands found: 151
No: Ligand ECFP6 Tc MDL keys Tc
1 BDZ 1 1
2 FUC GAL NDG FUC 1 1
3 GAL NDG FUC FUC 1 1
4 GAL NAG FUC FUC 1 1
5 FUC NAG GAL FUC 0.940298 1
6 FUC NDG GAL FUC 0.940298 1
7 FUC GAL NAG FUC 0.940298 1
8 BCW 0.940298 1
9 GAL NAG FUC 0.8 0.978723
10 FUC NDG GAL 0.8 0.978723
11 GAL NDG FUC 0.8 0.978723
12 FUC NAG GAL 0.8 0.978723
13 NAG GAL FUC 0.753425 0.978723
14 DR3 0.753425 0.978723
15 FUC GAL NDG 0.739726 0.978723
16 FUL GAL NAG 0.739726 0.978723
17 DR2 0.739726 0.978723
18 NDG GAL FUC 0.739726 0.978723
19 FUC GAL NAG 0.739726 0.978723
20 FUC GAL MAG FUC 0.710526 0.979167
21 FUC GAL NAG A2G FUC 0.702381 0.959184
22 NAG GAL FUC FUC A2G 0.662791 0.959184
23 FUC GAL NAG GAL FUC 0.654762 1
24 FUC GAL NAG A2G 0.613636 0.87037
25 NAG FUC 0.60274 0.93617
26 FUC NAG 0.60274 0.957447
27 GLC GAL FUC 0.6 0.723404
28 FUC GAL GLC 0.6 0.723404
29 LAT FUC 0.6 0.723404
30 BGC GAL FUC 0.6 0.723404
31 FUC LAT 0.6 0.723404
32 FUC GAL NAG NON FUC 0.597826 0.854545
33 MAG FUC GAL 0.594937 0.979167
34 GLC GAL NAG GAL FUC FUC 0.591398 1
35 BGC GAL NAG GAL FUC FUC 0.591398 1
36 FUC GAL NAG GAL BGC 0.565217 0.978723
37 GLA NAG GAL FUC 0.551724 0.978723
38 GAL NAG GAL FUC 0.551724 0.978723
39 XYS GAL FUC 0.55 0.708333
40 GLC FUC GAL FUC A2G 0.538462 1
41 BGC FUC GAL FUC A2G 0.538462 1
42 A2G GAL NAG FUC 0.532609 0.959184
43 FUC BGC GAL 0.512821 0.723404
44 G4S MAG FUC 0.511111 0.741935
45 FUC NAG GLA GAL 0.51087 0.958333
46 FUC GL0 A2G 0.505882 0.978723
47 NGA GAL FUC 0.505882 0.978723
48 A2G GLA FUC 0.505882 0.978723
49 FUC GAL A2G 0.505882 0.978723
50 A2G GAL FUC 0.505882 0.978723
51 FUC GLA A2G 0.505882 0.978723
52 A2G GAL BGC FUC 0.5 0.978723
53 FUC BGC GAL NAG 0.494624 0.978723
54 GAL A2G 0.493506 0.957447
55 GAL NDG 0.493506 0.957447
56 NLC 0.493506 0.957447
57 GAL NGA 0.493506 0.957447
58 NDG GAL 0.493506 0.957447
59 A2G GAL 0.493506 0.957447
60 FUC GAL 0.493151 0.702128
61 NDG FUC SIA GAL 0.490909 0.903846
62 SIA GLA NAG FUC 0.490909 0.903846
63 SIA GAL NAG FUC 0.490909 0.903846
64 SIA GAL NDG FUC 0.490909 0.903846
65 NAG FUC SIA GAL 0.490909 0.903846
66 FUC NDG GAL SIA 0.490909 0.903846
67 SGA MAG FUC 0.48913 0.741935
68 FUC BGC GAL NAG GAL 0.479592 0.978723
69 BHE 0.47619 0.636364
70 NAG AMU 0.47191 0.94
71 NAG MUB 0.47191 0.94
72 4YA 0.46988 0.636364
73 BHG FUC 0.46988 0.636364
74 FUC BHG 0.46988 0.636364
75 GLA GAL NAG FUC GAL GLC 0.460784 0.978723
76 NAG A2G 0.45679 0.938776
77 NAG NGA 0.45679 0.938776
78 BGC GLA GAL FUC 0.454545 0.723404
79 GAL NGA A2G 0.452381 0.92
80 BMA NAG MAN MAN MAN MAN MAN MAN MAN 0.45098 0.957447
81 EAG RAM RAM GLC RAM NAG RAM RAM GLC RAM 0.445545 0.94
82 GLA GLA FUC 0.444444 0.723404
83 GLA GAL FUC 0.444444 0.723404
84 GAL GAL FUC 0.444444 0.723404
85 FUC GLA GLA 0.444444 0.723404
86 FUC GAL GLA 0.444444 0.723404
87 NAG GAL GAL 0.44186 0.957447
88 GLA GAL NAG 0.44186 0.957447
89 MAN BMA NAG 0.44186 0.957447
90 MAN MAN BMA 0.441558 0.702128
91 GLC GAL NAG GAL FUC A2G 0.439252 0.959184
92 A2G GAL NAG FUC GAL GLC 0.439252 0.959184
93 NAG GDL 0.439024 0.938776
94 CBS CBS 0.439024 0.938776
95 NAG NDG 0.439024 0.938776
96 CBS 0.439024 0.938776
97 MAN MAN NAG 0.433333 0.918367
98 GAL NAG MAN 0.431818 0.957447
99 MAN NAG GAL 0.431818 0.957447
100 ASG GCD 0.430108 0.698413
101 NGA GC4 SO4 0.430108 0.698413
102 GAL BGC NAG GAL 0.428571 0.957447
103 G6S NAG 0.426966 0.737705
104 NAG MAN MMA 0.426966 0.958333
105 ASG IDR IDR ASG 0.425743 0.730159
106 FUC NAG TA5 0.425532 0.69697
107 M6P MAN MAN 0.425287 0.618182
108 BMA MAN MAN 0.425 0.702128
109 NAG MAN GAL BMA NAG MAN NAG GAL 0.424528 0.959184
110 NAG MAN MAN MAN NAG GAL NAG GAL 0.424528 0.959184
111 NAG MAN GAL BMA NDG MAN NAG GAL 0.424528 0.959184
112 MAN BMA NAG NAG MAN NAG GAL GAL 0.424528 0.959184
113 NAG MAN GAL MAN MAN NAG GAL 0.421569 0.938776
114 BGA 0.42 0.854545
115 8VZ 0.419753 0.92
116 NAG NAG NAG NAG NAG 0.418605 0.959184
117 NDG NAG NAG NDG 0.418605 0.959184
118 NDG NAG NAG NAG 0.418605 0.959184
119 CTO 0.418605 0.959184
120 NDG NAG NAG 0.418605 0.959184
121 NDG NAG NAG NDG NAG 0.418605 0.959184
122 NAG NAG NAG 0.418605 0.959184
123 NAG NAG NAG NAG NAG NAG NAG NAG 0.418605 0.959184
124 NAG NAG NAG NDG 0.418605 0.959184
125 NAG NAG NAG NAG NAG NAG 0.418605 0.959184
126 NAG NAG NDG 0.418605 0.959184
127 NAG NAG NAG NAG NDG NAG 0.418605 0.959184
128 NAG NAG NAG NAG 0.418605 0.959184
129 NAG NAG NAG NAG NDG 0.418605 0.959184
130 L42 0.414894 0.651515
131 MAN NAG 0.414634 0.957447
132 NAG MAN BMA 0.413043 0.957447
133 FUC GAL NGA 0.413043 0.916667
134 NAG MAN MAN 0.413043 0.957447
135 NAG MAN MAN MAN NAG 0.412371 0.938776
136 NAG BMA NAG MAN MAN NAG NAG 0.407407 0.959184
137 NAG NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.40708 0.938776
138 NAG BDP 0.406977 0.918367
139 NGK GCD 0.40625 0.6875
140 GCD ASG 0.40625 0.6875
141 NAG MAN BMA NDG MAN NAG GAL 0.405405 0.959184
142 NGA GAL BGC 0.404494 0.957447
143 GAL NAG GAL NAG GAL NAG 0.404255 0.959184
144 NAG GAL GAL NAG 0.404255 0.938776
145 SIA GLA NGS FUC 0.403226 0.734375
146 GAL MGC 0.402439 0.958333
147 NAG GAL NAG 0.402174 0.938776
148 M5G 0.401786 0.938776
149 NAG GCU NAG GCU NAG GCU 5AX 0.4 0.94
150 NAG BDP NAG BDP NAG BDP NAG 0.4 0.94
151 MAN MAN MAN GLC 0.4 0.702128
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4RDL; Ligand: FUC GAL NDG FUC; Similar sites found: 192
This union binding pocket(no: 1) in the query (biounit: 4rdl.bio1) has 13 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1JIF CU BLM 0.01344 0.4269 None
2 5TO8 7FM 0.005453 0.46124 1.06383
3 4XV1 904 0.0005036 0.5111 1.36986
4 4CQE CQE 0.000234 0.51179 1.43885
5 3TXO 07U 0.006655 0.42663 1.62338
6 3KRR DQX 0.003455 0.49042 1.69492
7 4YZN 4K5 0.01588 0.418 1.74216
8 1N07 FMN 0.02287 0.4204 1.84049
9 4N70 2HX 0.004577 0.4745 1.94805
10 3PE2 E1B 0.005404 0.46761 1.94805
11 5HVJ ANP 0.004634 0.4273 1.94805
12 4DC2 ADE 0.003794 0.41419 1.94805
13 3MVH WFE 0.02767 0.41267 1.94805
14 5LI1 ANP 0.02467 0.4059 1.94805
15 2YAB AMP 0.02146 0.40545 1.94805
16 2BNJ XYP XYP AHR FER 0.02349 0.41233 1.9802
17 2Y6O 1N1 0.000708 0.48717 2.06186
18 3G5D 1N1 0.005201 0.47435 2.0979
19 1C9K 5GP 0.0106 0.41157 2.22222
20 4BKJ STI 0.0002742 0.51458 2.27273
21 5HCY 60D 0.001059 0.50439 2.27273
22 3OFM 4B0 0.00105 0.46559 2.27273
23 2PVN P63 0.00469 0.45442 2.27273
24 5IH9 6BF 0.006246 0.45401 2.27273
25 2WU6 DKI 0.008196 0.43298 2.27273
26 2Q7D ANP 0.01097 0.43234 2.27273
27 5N87 N66 0.01589 0.43109 2.27273
28 3ETH ATP 0.01742 0.41521 2.27273
29 4O1P ANP 0.01383 0.41408 2.27273
30 4FG8 ATP 0.02232 0.40813 2.27273
31 2PYW ADP 0.02273 0.40638 2.27273
32 4K37 SAM 0.02103 0.40337 2.27273
33 4Q0L V14 0.02433 0.41086 2.28137
34 1PHK ATP 0.00948 0.4249 2.34899
35 4DE9 VTP 0.007755 0.44513 2.44755
36 5EOB 5QQ 0.001657 0.5025 2.5974
37 1OUK 084 0.005853 0.49319 2.5974
38 5UR1 YY9 0.001954 0.47679 2.5974
39 4LOO SB4 0.001313 0.46626 2.5974
40 3KAL ADP 0.005095 0.4574 2.5974
41 5MY8 RXZ 0.01041 0.43127 2.5974
42 3AKK ADP 0.01523 0.41515 2.5974
43 3KN5 ANP 0.01262 0.41506 2.5974
44 4YLL 4E3 0.02264 0.4101 2.5974
45 4UWH JXM 0.01979 0.40209 2.5974
46 5HES 032 0.0005498 0.49207 2.60586
47 5C1P DAL DAL 0.0219 0.41396 2.61438
48 1IOW ADP 0.03775 0.41124 2.61438
49 1IOW PHY 0.03775 0.41124 2.61438
50 5C1P ADP 0.01507 0.40639 2.61438
51 1ZY5 ANP 0.004147 0.43934 2.64026
52 2XMY CDK 0.0009006 0.5243 2.68456
53 5VC5 96M 0.0003308 0.51269 2.76817
54 2OFW ADX 0.01821 0.4329 2.88462
55 3SRV S19 0.008326 0.4232 2.88809
56 4QTB 38Z 0.01917 0.42053 2.89474
57 3E7O 35F 0.0003536 0.51785 2.92208
58 5U6C 7YS 0.001776 0.46579 2.92208
59 4NFN 2KC 0.00126 0.46474 2.92208
60 4BTK DTQ 0.01782 0.40793 2.92208
61 5LVP ATP 0.01933 0.40004 2.92208
62 4F4P 0SB 0.01382 0.45104 2.9304
63 1ZB6 GST 0.02549 0.41568 2.9316
64 5FBN 5WF 0.001158 0.49214 2.95203
65 3T4L ZEA 0.0166 0.40884 2.96296
66 1JXZ BCA 0.03798 0.40376 2.97398
67 5W2I I3P 0.0114 0.42702 3.11284
68 5W2I ADP 0.0114 0.42702 3.11284
69 4C2W ANP 0.007493 0.41879 3.22581
70 5W4W 9WG 0.0001034 0.54669 3.24675
71 5C03 AGS 0.0008935 0.47632 3.24675
72 4KBA 1QM 0.0002457 0.45774 3.24675
73 4WB6 ATP 0.01158 0.43015 3.24675
74 3HZT J60 0.002373 0.40797 3.24675
75 5XDT MB3 0.04286 0.4049 3.24675
76 5BYZ 4WE 0.04348 0.40385 3.24675
77 5EYK 5U5 0.001902 0.47122 3.26087
78 2EW5 Y12 0.0256 0.4012 3.31492
79 1XCL SAH 0.03394 0.41236 3.40426
80 2WEI VGG 0.0008246 0.41244 3.48432
81 2V7O DRN 0.001977 0.44592 3.57143
82 4LH7 1X8 0.005374 0.42061 3.57143
83 4CYI ATP 0.01467 0.41704 3.57143
84 4K33 ACP 0.01319 0.41699 3.57143
85 3V4S ATP 0.02555 0.40638 3.57143
86 1OBD ATP 0.01444 0.40767 3.59477
87 5MJA 7O3 0.0005215 0.48275 3.60656
88 4O4F ATP 0.0358 0.40252 3.62903
89 4O4F IHP 0.03791 0.40252 3.62903
90 2VN9 GVD 0.003651 0.42959 3.65448
91 4I94 ANP 0.006742 0.42848 3.66667
92 3M2W L8I 0.009419 0.41627 3.67893
93 2GU8 796 0.005404 0.47397 3.8961
94 4FHD 0TT 0.04296 0.40434 3.8961
95 4FHD EEM 0.04296 0.40434 3.8961
96 5H2U 1N1 0.0006256 0.40144 4.11985
97 2Z7R STU 0.006266 0.43737 4.22078
98 3HMO STU 0.00819 0.42405 4.22078
99 5AX9 4KT 0.009283 0.4207 4.22078
100 2ZYI STE 0.0282 0.40616 4.22078
101 4USF 6UI 0.003949 0.43399 4.27632
102 2QK4 ATP 0.001235 0.45611 4.54545
103 4NM5 ADP 0.003775 0.44987 4.54545
104 4IJP 1EH 0.007302 0.43309 4.54545
105 3F7Z 34O 0.01032 0.42093 4.54545
106 3ZRM ZRM 0.0106 0.42053 4.54545
107 1JPA ANP 0.001838 0.4127 4.54545
108 4UA3 COA 0.02415 0.40469 4.63918
109 3SXS PP2 0.002149 0.4603 4.85075
110 4F9C 0SX 0.01353 0.41376 4.86111
111 3LXK MI1 0.001391 0.48061 4.87013
112 3G5S FAD 0.002672 0.47677 4.87013
113 4OH4 ANP 0.002302 0.45482 4.87013
114 3PN1 IVH 0.005258 0.42276 4.87013
115 2RIO ADP 0.01808 0.40583 4.87013
116 5A6N U7E 0.01747 0.41022 4.947
117 5M06 ADP 0.01391 0.41003 5.07246
118 3DLS ADP 0.001117 0.46631 5.19481
119 2VPQ ANP 0.02189 0.41033 5.19481
120 1OX5 1PR 0.04096 0.40176 5.19481
121 4XYM A12 0.008359 0.42733 5.21739
122 4CRL C1I 0.02074 0.42404 5.26316
123 5LXM ADP 0.008346 0.42335 5.26316
124 4A4X JUP 0.008106 0.43734 5.37634
125 4AU8 Z3R 0.004523 0.43012 5.40541
126 3O0G 3O0 0.002517 0.4512 5.47945
127 1UNH IXM 0.005884 0.42687 5.47945
128 4P5Z Q7M 0.001134 0.49756 5.51948
129 4CLI 5P8 0.01827 0.43543 5.51948
130 1VJY 460 0.0009782 0.49424 5.61056
131 4M69 ANP 0.01092 0.42332 5.65371
132 1UPR 4IP 0.004173 0.43358 5.69106
133 4Y8D 49J 0.007727 0.40227 5.71429
134 1IF7 SBR 0.04952 0.43273 5.79151
135 1M0W ANP 0.001991 0.45416 5.84416
136 4OCJ NDG 0.01294 0.43971 5.84416
137 2X2M X2M 0.01265 0.41972 5.84416
138 5DEY 59T 0.001254 0.50758 6.06061
139 2FB3 GTP 0.004078 0.45822 6.16883
140 5BNW 12V 0.03405 0.41076 6.16883
141 5LWV UDP 0.03362 0.40585 6.16883
142 5JFS 6K0 0.00113 0.50043 6.49351
143 4LRJ ANP 0.01779 0.40755 6.50888
144 2V58 LZJ 0.008042 0.45611 6.81818
145 1CM8 ANP 0.00888 0.42242 6.81818
146 3SAO NKN 0.005786 0.43056 6.875
147 4YMJ 4EJ 0.0007832 0.46002 6.90789
148 3UDZ ADP 0.008756 0.42601 7.14286
149 3VOT ADP 0.002115 0.4106 7.14286
150 4L3L 5FI 0.007487 0.44454 7.23684
151 4TWP AXI 0.0006193 0.51949 7.38007
152 4QJP V1F 0.01473 0.42144 7.60456
153 5VNF VAL THR SER VAL VAL 0.01404 0.40208 7.64331
154 4Y0X ADP 0.01484 0.40975 7.79221
155 5EKO N17 0.02444 0.40763 7.79221
156 1TT8 PHB 0.004387 0.45197 7.92683
157 1I82 BGC BGC 0.007396 0.41125 7.93651
158 3GGF GVD 0.01345 0.41042 7.97342
159 2WEL K88 0.005448 0.41739 8
160 4JR7 GNP 0.005793 0.43354 8.02139
161 2B9F ADP 0.01358 0.41425 8.44156
162 2B9H ADP 0.01498 0.41394 8.44156
163 2B9J ADP 0.02039 0.40294 8.44156
164 3KMW ATP 0.002536 0.45024 8.52713
165 5BVE 4VG 0.002794 0.49366 8.76623
166 4H3Q ANP 0.01579 0.41776 8.76623
167 4Q5H ANP 0.007454 0.42838 9.21053
168 2OFV 242 0.002924 0.47181 9.38628
169 2IVF MGD 0.03767 0.41496 9.41558
170 2BKK ADP 0.01054 0.41444 9.46746
171 4PZ6 GMP 0.007297 0.40233 9.52381
172 4BCM T7Z 0.001313 0.45225 9.92366
173 4BCQ TJF 0.007621 0.41762 9.92366
174 4M1U MBG A2G 0.009085 0.4316 10
175 2ZV2 609 0.002354 0.40625 10.0671
176 2BOS GLA GAL 0.007517 0.41739 10.2941
177 2BOS GLA GAL GLC 0.008986 0.4103 10.2941
178 3TFJ THG 0.03135 0.4042 10.3896
179 2Z77 HE7 0.02382 0.40956 10.7914
180 4BCN T9N 0.001384 0.40617 11.0687
181 2HK5 1BM 0.001211 0.47255 11.4815
182 1Q8Y ADE 0.001754 0.44881 11.6883
183 1Q8Y ADP 0.01491 0.41672 11.6883
184 5TDF ADP 0.01251 0.42003 12.3377
185 5VZ0 ADP 0.01254 0.41415 12.3377
186 2QX0 PH2 0.007421 0.42018 13.8365
187 3HAV ATP 0.003562 0.42784 20.0669
188 5HQ0 LZ9 0.003006 0.45323 22.619
189 3BU5 ATP 0.01515 0.41211 33.3333
190 4GYW UDP 0.03724 0.40758 35.7143
191 1K3A ACP 0.01503 0.40551 35.7143
192 3VPB ADP 0.0276 0.40804 42.8571
Pocket No.: 2; Query (leader) PDB : 4RDL; Ligand: FUC GAL NDG FUC; Similar sites found: 35
This union binding pocket(no: 2) in the query (biounit: 4rdl.bio1) has 13 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3MWS 017 0.04327 0.40424 None
2 2YNE YNE 0.03564 0.43796 1.2987
3 2YNE NHW 0.03564 0.43796 1.2987
4 5AWM ANP 0.003312 0.40196 1.94805
5 4YZC STU 0.003285 0.46937 2.27273
6 5X8G S0N 0.03434 0.42441 2.27273
7 2PUL ACP 0.01829 0.40552 2.27273
8 3PDT ADP 0.01611 0.40827 2.54545
9 5W10 CMP 0.01863 0.40988 2.5641
10 4O8A FAD 0.04278 0.42959 2.5974
11 4D9C PMP 0.03591 0.40289 2.5974
12 5GZ9 ANP 0.02924 0.40474 2.95082
13 5JKG 6LF 0.003738 0.46835 3.24675
14 3AHO 3A2 0.03532 0.40127 3.24675
15 5X7Q GLC GLC GLC GLC 0.002388 0.40107 3.24675
16 4AUA 4AU 0.007956 0.42477 3.58306
17 3GNI ATP 0.003702 0.44857 3.8961
18 5UIU 8CG 0.01299 0.43149 4.02477
19 3K5I AIR 0.04002 0.40625 4.22078
20 3K5I ADP 0.02245 0.40625 4.22078
21 1MHC FME TYR PHE ILE ASN ILE LEU THR LEU 0.02839 0.41525 4.25532
22 2JLD AG1 0.04399 0.40148 4.54545
23 1EBG PAH 0.02319 0.40436 4.87013
24 3ZLQ 6T9 0.02549 0.40303 4.91803
25 2C4J GSO 0.0228 0.40756 5.04587
26 3Q9T FAY 0.02813 0.44766 5.51948
27 4MV1 ADP 0.04752 0.40212 5.84416
28 5JZJ AN2 0.01964 0.40429 6.73401
29 1BXO PP7 0.01671 0.43057 7.46753
30 1MDC PLM 0.01431 0.42002 7.57576
31 4YEF 4CQ 0.04496 0.40249 7.86517
32 3SLS ANP 0.01503 0.41752 8.22368
33 4FL3 ANP 0.01513 0.41739 9.09091
34 5DQ8 FLF 0.03775 0.40697 11.25
35 5CEO 50D 0.009288 0.42336 11.6667
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